|
Name |
Accession |
Description |
Interval |
E-value |
| NanH |
COG4409 |
Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain [Carbohydrate ... |
173-530 |
1.04e-170 |
|
Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443531 [Multi-domain] Cd Length: 376 Bit Score: 487.14 E-value: 1.04e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 173 RMAVGVRHAGDDGSAAFRIPGLVTTNKGTLLGVYDVRYNSSVDLQEHIDIGLSRSTDGGKTWEKMRLPLSFKEYGGLpsa 252
Cdd:COG4409 21 LTETAVFTSGDDGYASYRIPALVTTPKGTLLAFADARYNGSGDLPGDIDIVMRRSTDGGKTWSPPQVILDYGEGGGL--- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 253 QNGVGDPSILVDTKTNTVWIVAAWTHGMgNQRAWWSSHQGMDLNHTAQLVLAKSTDDGKTWSEPINITEQVKLPEWYFLL 332
Cdd:COG4409 98 SAGVGDPAPVVDRKTGRIFLLADWMPGN-DGEGWSGSEPGTDPKGTRQLWVTYSDDDGKTWSEPRNITPQVKDPDWRFLA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 333 QGPGRGITMED----GTLVFPIQFIDKTRiPNAGIMYSKDRGETWTIHHHART--NTTEAQVAEVEPGTLMLNMRDNRG- 405
Cdd:COG4409 177 TGPGHGIQLKNgehkGRLVFPAYYSDGGK-PSAAVIYSDDHGKTWKLGESANDkaNTNEAQVVELSDGRLMLNMRNQSGg 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 406 GSRAVYTTKDLGKTWKEHEsSRTALIEPVCMASLISVKAKDnvlGKDLLIFSNPNSTNARKDMTIKISMDGGNTWSPEHQ 485
Cdd:COG4409 256 GKRAVATSKDGGETWSEVT-FDPALPEPVCQASIIRYDKGD---GKDVLLFSNPASPKGRKNGTVRLSYDDGKTWPYSKV 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1578914760 486 LlldEGYNWGYSCLTMIDKETIGILYESSVA-HMTFQSIKLRDIIK 530
Cdd:COG4409 332 I---EPGGSAYSCLTVLDDGTIGLLYERGDAgNIVFARFPLDWLTQ 374
|
|
| Sialidase_non-viral |
cd15482 |
Non-viral sialidases; Sialidases or neuraminidases function to bind and hydrolyze terminal ... |
178-528 |
7.09e-103 |
|
Non-viral sialidases; Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
Pssm-ID: 271234 [Multi-domain] Cd Length: 339 Bit Score: 312.47 E-value: 7.09e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 178 VRHAGDDGSAAFRIPGLVTTNKGTLLGVYDVRYNSSVDLQEHIDIGLSRSTDGGKTWEKMRLPLSFKEYGGlpsaqNGVG 257
Cdd:cd15482 3 LFVPGDEGSDSYRIPSLVTTPNGTLLAFADGRYEGAGDLGGDIDIVVRRSTDGGKTWSEPVTVVDGGGSGG-----ASYG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 258 DPSILVDTKTNTVWIVAAWTHGMGNQRAWWSShqgmdlnhTAQLVLAKSTDDGKTWSEPINITEQVKLPEWYFLLQGPGR 337
Cdd:cd15482 78 DPSLVVDPDTGRIFLFYTSGPGGGGEALTGDG--------TVRVRLSTSDDDGKTWSEPRDLTPQVKPSGWKFFFTGPGR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 338 GITMEDGTLVFPIQFIDKTRIPN-AGIMYSKDRGETWTIH---HHARTNTTEAQVAEVEPGTLMLNMRDNR-GGSRAVYT 412
Cdd:cd15482 150 GIQLSDGRLVFPAYARNGGGGGDgAVVIYSDDGGKTWTRGggvPSSGAGGDEPSIVELSDGRLLMNARNSGgGGGRAVAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 413 TKDLGKTWKEHESSrTALIEPVCMASLISVKAKdnvlGKDLLIFSNPNSTNA-RKDMTIKISMDGGNTWSpeHQLLLDEG 491
Cdd:cd15482 230 STDGGETWSEPVPT-PSLPDPGCQGSLIRLPDG----GRKVLLFSNPASPGKgRTNLTLRLSDDGGKTWP--DVRVLEDG 302
|
330 340 350
....*....|....*....|....*....|....*..
gi 1578914760 492 YNWGYSCLTMIDKETIGILYESSVAHmTFQSIKLRDI 528
Cdd:cd15482 303 PGSGYSSLTQLPDGTIGLLYEEGRGG-GYEGIKFARL 338
|
|
| BNR_assoc_N |
pfam14873 |
N-terminal domain of BNR-repeat neuraminidase; This domain is usually found at the N-terminus ... |
9-158 |
2.28e-73 |
|
N-terminal domain of BNR-repeat neuraminidase; This domain is usually found at the N-terminus of the BNR-repeat neuraminidase protein family.
Pssm-ID: 434278 Cd Length: 153 Bit Score: 229.64 E-value: 2.28e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 9 ADTVFVKTPQVPILIERHDNVLAYLRL--DAKETKTLDNVTISFDKNVPLSQIKAIKLYYGGTEAPQDRGKKRFAPVEYI 86
Cdd:pfam14873 1 ADTIYVKQTQVPILIEREDNPLLRIRIiqGAKEPLVLTELKLDFGGTTDLSDIESVKLYYGGTEARQDKGKKRFAPVDYI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1578914760 87 SSNNPGQTLSANPSYSIKKAEATPKSNTLTLEGKQNLFPGYNFFWISIEMQPTASLHTKICAEVTQVKGDGK 158
Cdd:pfam14873 81 SSHTPGNTLAANPSYSIRKSEVTAPARTVTLKGNQELFPGINYFWVSVQLKPNASLLHKVTANVTSVTLNGK 152
|
|
| BNR_3 |
pfam13859 |
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these ... |
191-422 |
5.12e-25 |
|
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
Pssm-ID: 372760 Cd Length: 302 Bit Score: 104.99 E-value: 5.12e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 191 IPGLVTTNkGTLLGVYDVRYNSSVDlQEHIDIGLSRSTDGGKTWEKMrlplsfKEYGGLPSAQNGVGDPSILVDTKTNTV 270
Cdd:pfam13859 1 VPSLVEVD-GDVFAVAEAQCKKKSD-EGFTGIAIKSSTDDGKTWSEP------VAVLDSGGKKDRVSVPRPTTVVKGNDI 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 271 WIVAAWthgmgnqrawWSSHQGmdlNHTAQLVLAKSTDDGKT-WSEPINITEQVKLPEW-YFLLQGPGRGITMEDGTLVF 348
Cdd:pfam13859 73 YMLVGK----------YSHKTG---ADDAGLLLVKSTDGGKKyWGDTSSLPETLFPGLGtRLLIGGGGSGVKMEDGTLVF 139
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1578914760 349 PIQFIDKTRIPNAGIMYSKDRGETWTIHHHAR----TNTTeaqVAEVEPGTLMLNMR-DnrGGSRAVYTTKDLGKTWKE 422
Cdd:pfam13859 140 PVEGTKKDGDKVSLIIYSSDDGKSWTLSKGMSddgcSDPS---VVEWEDGKLMMMTAcD--DGRRRVYESGDKGESWTE 213
|
|
| PTZ00334 |
PTZ00334 |
trans-sialidase; Provisional |
331-422 |
3.64e-05 |
|
trans-sialidase; Provisional
Pssm-ID: 240366 [Multi-domain] Cd Length: 780 Bit Score: 46.43 E-value: 3.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 331 LLQGPGRGITMEDGTLVFPIQFIDKTRIPNAGIMYSKDRGETWTIHHHARTNTTEAQVAEVEPGTLMLnMRDNRGGSRAV 410
Cdd:PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATESGNLSKGMSADGCSDPSVVEWKEGKLMM-MTACDDGRRRV 336
|
90
....*....|..
gi 1578914760 411 YTTKDLGKTWKE 422
Cdd:PTZ00334 337 YESGDKGDSWTE 348
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| NanH |
COG4409 |
Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain [Carbohydrate ... |
173-530 |
1.04e-170 |
|
Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443531 [Multi-domain] Cd Length: 376 Bit Score: 487.14 E-value: 1.04e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 173 RMAVGVRHAGDDGSAAFRIPGLVTTNKGTLLGVYDVRYNSSVDLQEHIDIGLSRSTDGGKTWEKMRLPLSFKEYGGLpsa 252
Cdd:COG4409 21 LTETAVFTSGDDGYASYRIPALVTTPKGTLLAFADARYNGSGDLPGDIDIVMRRSTDGGKTWSPPQVILDYGEGGGL--- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 253 QNGVGDPSILVDTKTNTVWIVAAWTHGMgNQRAWWSSHQGMDLNHTAQLVLAKSTDDGKTWSEPINITEQVKLPEWYFLL 332
Cdd:COG4409 98 SAGVGDPAPVVDRKTGRIFLLADWMPGN-DGEGWSGSEPGTDPKGTRQLWVTYSDDDGKTWSEPRNITPQVKDPDWRFLA 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 333 QGPGRGITMED----GTLVFPIQFIDKTRiPNAGIMYSKDRGETWTIHHHART--NTTEAQVAEVEPGTLMLNMRDNRG- 405
Cdd:COG4409 177 TGPGHGIQLKNgehkGRLVFPAYYSDGGK-PSAAVIYSDDHGKTWKLGESANDkaNTNEAQVVELSDGRLMLNMRNQSGg 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 406 GSRAVYTTKDLGKTWKEHEsSRTALIEPVCMASLISVKAKDnvlGKDLLIFSNPNSTNARKDMTIKISMDGGNTWSPEHQ 485
Cdd:COG4409 256 GKRAVATSKDGGETWSEVT-FDPALPEPVCQASIIRYDKGD---GKDVLLFSNPASPKGRKNGTVRLSYDDGKTWPYSKV 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1578914760 486 LlldEGYNWGYSCLTMIDKETIGILYESSVA-HMTFQSIKLRDIIK 530
Cdd:COG4409 332 I---EPGGSAYSCLTVLDDGTIGLLYERGDAgNIVFARFPLDWLTQ 374
|
|
| Sialidase_non-viral |
cd15482 |
Non-viral sialidases; Sialidases or neuraminidases function to bind and hydrolyze terminal ... |
178-528 |
7.09e-103 |
|
Non-viral sialidases; Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
Pssm-ID: 271234 [Multi-domain] Cd Length: 339 Bit Score: 312.47 E-value: 7.09e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 178 VRHAGDDGSAAFRIPGLVTTNKGTLLGVYDVRYNSSVDLQEHIDIGLSRSTDGGKTWEKMRLPLSFKEYGGlpsaqNGVG 257
Cdd:cd15482 3 LFVPGDEGSDSYRIPSLVTTPNGTLLAFADGRYEGAGDLGGDIDIVVRRSTDGGKTWSEPVTVVDGGGSGG-----ASYG 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 258 DPSILVDTKTNTVWIVAAWTHGMGNQRAWWSShqgmdlnhTAQLVLAKSTDDGKTWSEPINITEQVKLPEWYFLLQGPGR 337
Cdd:cd15482 78 DPSLVVDPDTGRIFLFYTSGPGGGGEALTGDG--------TVRVRLSTSDDDGKTWSEPRDLTPQVKPSGWKFFFTGPGR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 338 GITMEDGTLVFPIQFIDKTRIPN-AGIMYSKDRGETWTIH---HHARTNTTEAQVAEVEPGTLMLNMRDNR-GGSRAVYT 412
Cdd:cd15482 150 GIQLSDGRLVFPAYARNGGGGGDgAVVIYSDDGGKTWTRGggvPSSGAGGDEPSIVELSDGRLLMNARNSGgGGGRAVAE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 413 TKDLGKTWKEHESSrTALIEPVCMASLISVKAKdnvlGKDLLIFSNPNSTNA-RKDMTIKISMDGGNTWSpeHQLLLDEG 491
Cdd:cd15482 230 STDGGETWSEPVPT-PSLPDPGCQGSLIRLPDG----GRKVLLFSNPASPGKgRTNLTLRLSDDGGKTWP--DVRVLEDG 302
|
330 340 350
....*....|....*....|....*....|....*..
gi 1578914760 492 YNWGYSCLTMIDKETIGILYESSVAHmTFQSIKLRDI 528
Cdd:cd15482 303 PGSGYSSLTQLPDGTIGLLYEEGRGG-GYEGIKFARL 338
|
|
| BNR_assoc_N |
pfam14873 |
N-terminal domain of BNR-repeat neuraminidase; This domain is usually found at the N-terminus ... |
9-158 |
2.28e-73 |
|
N-terminal domain of BNR-repeat neuraminidase; This domain is usually found at the N-terminus of the BNR-repeat neuraminidase protein family.
Pssm-ID: 434278 Cd Length: 153 Bit Score: 229.64 E-value: 2.28e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 9 ADTVFVKTPQVPILIERHDNVLAYLRL--DAKETKTLDNVTISFDKNVPLSQIKAIKLYYGGTEAPQDRGKKRFAPVEYI 86
Cdd:pfam14873 1 ADTIYVKQTQVPILIEREDNPLLRIRIiqGAKEPLVLTELKLDFGGTTDLSDIESVKLYYGGTEARQDKGKKRFAPVDYI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1578914760 87 SSNNPGQTLSANPSYSIKKAEATPKSNTLTLEGKQNLFPGYNFFWISIEMQPTASLHTKICAEVTQVKGDGK 158
Cdd:pfam14873 81 SSHTPGNTLAANPSYSIRKSEVTAPARTVTLKGNQELFPGINYFWVSVQLKPNASLLHKVTANVTSVTLNGK 152
|
|
| BNR_3 |
pfam13859 |
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these ... |
191-422 |
5.12e-25 |
|
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
Pssm-ID: 372760 Cd Length: 302 Bit Score: 104.99 E-value: 5.12e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 191 IPGLVTTNkGTLLGVYDVRYNSSVDlQEHIDIGLSRSTDGGKTWEKMrlplsfKEYGGLPSAQNGVGDPSILVDTKTNTV 270
Cdd:pfam13859 1 VPSLVEVD-GDVFAVAEAQCKKKSD-EGFTGIAIKSSTDDGKTWSEP------VAVLDSGGKKDRVSVPRPTTVVKGNDI 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 271 WIVAAWthgmgnqrawWSSHQGmdlNHTAQLVLAKSTDDGKT-WSEPINITEQVKLPEW-YFLLQGPGRGITMEDGTLVF 348
Cdd:pfam13859 73 YMLVGK----------YSHKTG---ADDAGLLLVKSTDGGKKyWGDTSSLPETLFPGLGtRLLIGGGGSGVKMEDGTLVF 139
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1578914760 349 PIQFIDKTRIPNAGIMYSKDRGETWTIHHHAR----TNTTeaqVAEVEPGTLMLNMR-DnrGGSRAVYTTKDLGKTWKE 422
Cdd:pfam13859 140 PVEGTKKDGDKVSLIIYSSDDGKSWTLSKGMSddgcSDPS---VVEWEDGKLMMMTAcD--DGRRRVYESGDKGESWTE 213
|
|
| BNR_2 |
pfam13088 |
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these ... |
222-497 |
6.33e-20 |
|
BNR repeat-like domain; This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
Pssm-ID: 463781 [Multi-domain] Cd Length: 280 Bit Score: 90.08 E-value: 6.33e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 222 IGLSRSTDGGKTWEKMRLpLSFKEYGGLP--SAQNGVgdpsiLVDTKTNTVW---IVAAWTHGmgnqraWWSShqgmdln 296
Cdd:pfam13088 20 IWRSVFDPGSNKWSAPQV-VADGEQLGRYirKLGNPV-----LFRDPGGTLVlfyKVGVSPGG------WAGS------- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 297 htaQLVLAKSTDDGKTWSEPinitEQVKLPeWYFLLQGPGRG--ITMEDGTLVFPI--QFIDKTRIPnagIMYSKDRGET 372
Cdd:pfam13088 81 ---KIYRITSSDNGRTWSAP----RRLPPG-PFLNISGPVKNkpVQLADGRLLLPSyhELAGKWAAH---LELSDDGGVT 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 373 WTIHHHARTNTTEAQVAEVEP--GTLMLNMRdNRGGSRAVYTTKDLGKTWKEHESsrTALiePVCMASLISVKAKDnvlG 450
Cdd:pfam13088 150 WRKGRPDNAISGELQPSVLVLadGRLVMLFR-SQEGAILASESTDGGLTWSPPEP--TNL--PNPNSGIDAVNLPD---G 221
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1578914760 451 KDLLIFSNPNSTNARKDMTIKISMDGGNTWSPEHqlLLDEGYNWGYS 497
Cdd:pfam13088 222 RLLLVYNPPNAGKPRGPLALALSEDGGKSWEEVL--TLEDGPGDEYS 266
|
|
| COG4692 |
COG4692 |
Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane ... |
306-482 |
2.22e-14 |
|
Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443727 [Multi-domain] Cd Length: 353 Bit Score: 74.58 E-value: 2.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 306 STDDGKTWSEPiniteqVKLPEWYFLLQGPGRG--ITMEDGTLVFPIqFIDKTRIPNAGIMYSKDRGETWTIH--HHART 381
Cdd:COG4692 137 STDGGKTWSPP------ERLPEGPFLIGGPVRNkpVVLSDGRILLPS-YTESGGKWRSHVEISDDGGKTWTKSpiPKGFG 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 382 NTteaQ--VAEVEPGTLMLNMRDNrgGSRAVYT--TKDLGKTWKehESSRTALIEPvcMASLISVKAKDnvlGKDLLIFs 457
Cdd:COG4692 210 AI---QpsILELKDGRLQALMRSR--GAGRIYRseSTDGGKTWS--PPEATDLPNP--NSGIDAVTLKD---GRLLLVY- 276
|
170 180
....*....|....*....|....*..
gi 1578914760 458 NPNSTNA--RKDMTIKISMDGGNTWSP 482
Cdd:COG4692 277 NPTSAGGggRTPLSLALSDDEGKTWKD 303
|
|
| COG4447 |
COG4447 |
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
223-420 |
9.66e-08 |
|
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only];
Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 51.54 E-value: 9.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 223 GLSRSTDGGKTWEKMRLPLSFKEYGGLpsaqnGVGDPsilvdtktNTVWIvaawthgmgnqrawwSSHQGmdlnhtaqlV 302
Cdd:COG4447 14 GILRSTDGGKTWTPLSDGLPGLSLRAV-----AFSDP--------NTVWV---------------GTGPG---------G 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 303 LAKSTDDGKTWSEpiniteqvklpewyfLLQGPgrgitmeDGTLVFPIQFIDKTRI--PNAGIMYSKDRGETWTiHHHAR 380
Cdd:COG4447 57 IYRSTDGGKTWTE---------------VNSGP-------DNPRLFAIAFSDPNTGyaAVGGIYRTTDGGKTWT-KVSSG 113
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1578914760 381 TNTTEAQVAEVEPGTL-------MLNMRDNRGGsravYTTKDLGKTW 420
Cdd:COG4447 114 LPVDLNDVAFLDPGTLyaageggLIYRSTDGGE----YRSTDGGKTW 156
|
|
| PTZ00334 |
PTZ00334 |
trans-sialidase; Provisional |
331-422 |
3.64e-05 |
|
trans-sialidase; Provisional
Pssm-ID: 240366 [Multi-domain] Cd Length: 780 Bit Score: 46.43 E-value: 3.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 331 LLQGPGRGITMEDGTLVFPIQFIDKTRIPNAGIMYSKDRGETWTIHHHARTNTTEAQVAEVEPGTLMLnMRDNRGGSRAV 410
Cdd:PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATESGNLSKGMSADGCSDPSVVEWKEGKLMM-MTACDDGRRRV 336
|
90
....*....|..
gi 1578914760 411 YTTKDLGKTWKE 422
Cdd:PTZ00334 337 YESGDKGDSWTE 348
|
|
| COG4447 |
COG4447 |
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
302-480 |
3.94e-05 |
|
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only];
Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 43.84 E-value: 3.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 302 VLAKSTDDGKTWsepinitEQVKLPEWYFLLQGpgrgitmedgtlvfpIQFIDKTRI----PNAGIMYSKDRGETWTihh 377
Cdd:COG4447 14 GILRSTDGGKTW-------TPLSDGLPGLSLRA---------------VAFSDPNTVwvgtGPGGIYRSTDGGKTWT--- 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 378 HARTNTTEAQVAEVE---PGTLMLNMrdnrGGsraVYTTKDLGKTWKEHESSRTaliepvcmASLISVKAKDN----VLG 450
Cdd:COG4447 69 EVNSGPDNPRLFAIAfsdPNTGYAAV----GG---IYRTTDGGKTWTKVSSGLP--------VDLNDVAFLDPgtlyAAG 133
|
170 180 190
....*....|....*....|....*....|
gi 1578914760 451 KDLLIFSNPNSTNARkdmtikiSMDGGNTW 480
Cdd:COG4447 134 EGGLIYRSTDGGEYR-------STDGGKTW 156
|
|
| COG4447 |
COG4447 |
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor ... |
360-514 |
1.33e-04 |
|
Uncharacterized conserved protein related to plant photosystem II stability/assembly factor [General function prediction only];
Pssm-ID: 443546 [Multi-domain] Cd Length: 156 Bit Score: 42.30 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 360 NAGIMYSKDRGETWTIHHHARTNTTEAQVAEVEPGTLMLNMRDNRggsraVYTTKDLGKTWKEhessrtaliepvcmasl 439
Cdd:COG4447 12 SGGILRSTDGGKTWTPLSDGLPGLSLRAVAFSDPNTVWVGTGPGG-----IYRSTDGGKTWTE----------------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 440 isVKAKDNVLGKDLLIFSNPNSTNARKDMTIKiSMDGGNTWSPehqllLDEGYNWGYSCLTMIDKETI------GILYES 513
Cdd:COG4447 70 --VNSGPDNPRLFAIAFSDPNTGYAAVGGIYR-TTDGGKTWTK-----VSSGLPVDLNDVAFLDPGTLyaagegGLIYRS 141
|
.
gi 1578914760 514 S 514
Cdd:COG4447 142 T 142
|
|
| Sortilin-Vps10 |
pfam15902 |
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, ... |
306-422 |
7.55e-04 |
|
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.
Pssm-ID: 464929 [Multi-domain] Cd Length: 444 Bit Score: 42.19 E-value: 7.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 306 STDDGKTWSEpinITEQVKLPEWYFLLQGPgrgitmEDGTLVFpiqFIDKTRIpnagIMYSKDRGETWtihHHARTNTTE 385
Cdd:pfam15902 6 SHDYGKTWKK---VKDVPDGEAILAIYPHP------YDNDRAY---LLTDGKK----HYYTTDRGKTF---RSFKLPFPP 66
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1578914760 386 AQVAEV------EPGTLMLNMRDNRGGS--RAVYTTKDLGKTWKE 422
Cdd:pfam15902 67 NLFGPPlsfhpkDPDWLIWYGGKCFSGDchSVAYYSTDGGKSWKL 111
|
|
| Sortilin-Vps10 |
pfam15902 |
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, ... |
366-507 |
9.38e-04 |
|
Sortilin, neurotensin receptor 3,; Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.
Pssm-ID: 464929 [Multi-domain] Cd Length: 444 Bit Score: 41.80 E-value: 9.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578914760 366 SKDRGETWTihhhartntteaQVAEVEPGTLMLNMR----DNR-----GGSRAVYTTKDLGKTWKehesSRTALIEPVCM 436
Cdd:pfam15902 6 SHDYGKTWK------------KVKDVPDGEAILAIYphpyDNDrayllTDGKKHYYTTDRGKTFR----SFKLPFPPNLF 69
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1578914760 437 ASLISVKAKDnvlgKDLLIFSNPNSTNARKDMTIKISMDGGNTWspehQLLLD--EGYNWGYSclTMIDKETI 507
Cdd:pfam15902 70 GPPLSFHPKD----PDWLIWYGGKCFSGDCHSVAYYSTDGGKSW----KLLLEyvRRCEWAVS--SKADENLI 132
|
|
| |
