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Conserved domains on  [gi|1575455804|ref|WP_129902172|]
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glycoside hydrolase family 3 C-terminal domain-containing protein [Bifidobacterium pseudocatenulatum]

Protein Classification

glycoside hydrolase family 3 protein( domain architecture ID 1001238)

glycoside hydrolase family 3 (GH3) protein containing carbohydrate binding module 6 (CBM6) includes beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase activities

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
alph_arabinopyran super family cl49560
exo-alpha-(1->6)-L-arabinopyranosidase;
5-661 0e+00

exo-alpha-(1->6)-L-arabinopyranosidase;


The actual alignment was detected with superfamily member NF041610:

Pssm-ID: 469494 [Multi-domain]  Cd Length: 738  Bit Score: 632.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804   5 ELSVVEKAAMLSGGSEWDSRGNDRADIPSFVMSDGPHGVRRQLGEGDHLGIGASKPATCFPTAGTVANSWDPALAEEMGE 84
Cdd:NF041610    2 DLTLEEKASLTSGADAWHLQGVESKGIPGYMITDGPHGLRKAASDTGATDLYDSVPATCFPPAAGLASSWNPELVREVGE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  85 ALGSEAHDLDVNVLLGPGLNIKRNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELRRQASNSVV 164
Cdd:NF041610   82 AMGEECIQEKVAVILGPGVNIKRNPLGGRCFEYWSEDPYLAGHEAVGIVEGVQSKGVGTSLKHFAANNQETDRLRVSARV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 165 DERTMRELYLTGFEIAVREAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGGSNSAVAAVKAGGSLEM 244
Cdd:NF041610  162 SERALREIYLPAFEHIVKTAQPWTVMCAYNRINGVHSSQNRWLLTDVLRGEWGFDGIVMSDWGAVHDRVASLNAGLNLEM 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 245 PsPGFTSARELEgAVKAGTLSEADINARAAEVAKIAAATKlVGVGRNDLLKDdiAAAHHDVARKVAEGSSVLLKNDNATL 324
Cdd:NF041610  242 P-PSGTDDQIVE-AVRDGRLDPEQLDRMAQGMIDLVDKAR-PAMSRDGYRYD--VDAHDEIARRAAQESIVLLKNEDGIL 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 325 PFKAGTRVAVIGDMAATARYQGSGSSKVNATKEENILE-------EVKNAEGLVLAGYEQgydrqgkaDRVLVEDAVALA 397
Cdd:NF041610  317 PLAKGAKIAVIGEFARTPRYQGGGSSHITPTRMTSFLDalaergiDADFAPGFTLDDAPQ--------DPALTDEAVAAA 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 398 gkESVDVVLAVVGLDERSESEGLDRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVEL-PWIDDVAAVLYVGLSGQAG 476
Cdd:NF041610  389 --RGADTVLLFLGLPEEAESEGFDRTTLDLPAKQIELLEAVAAVNPNVVVVLSNGSVVSVaPWRDQAKGILESWLLGQAG 466

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 477 ASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPAIGRDAIYREGPFVGYRYYETAGVPVRFPFGYGLSYSTFTYSAA 556
Cdd:NF041610  467 GAALADVLFGDVNPSGKLAQTIPLDLEDDPSMVNWPGEEGHVDYGEGVFVGYRYYDTFDKPVAYPFGYGLSYATFEISDV 546

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 557 TAGENG-----IDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGFAKVSLAAHESKSVHIDFDRYTFRHFDVASNE 631
Cdd:NF041610  547 AVEKTGansarVSATVTNTSDVDGAETVQVYVAPGKADVARPVHELKGFAKVFLKAGESKEVSIDLDERAFAYWSERFDD 626

                         650       660       670
                  ....*....|....*....|....*....|
gi 1575455804 632 WKTETGEWTLMVGDNAEHLPLTIPRTVAGD 661
Cdd:NF041610  627 WHVEAGTYGIEVGTSSRDIAATVDVELDGD 656
 
Name Accession Description Interval E-value
alph_arabinopyran NF041610
exo-alpha-(1->6)-L-arabinopyranosidase;
5-661 0e+00

exo-alpha-(1->6)-L-arabinopyranosidase;


Pssm-ID: 469494 [Multi-domain]  Cd Length: 738  Bit Score: 632.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804   5 ELSVVEKAAMLSGGSEWDSRGNDRADIPSFVMSDGPHGVRRQLGEGDHLGIGASKPATCFPTAGTVANSWDPALAEEMGE 84
Cdd:NF041610    2 DLTLEEKASLTSGADAWHLQGVESKGIPGYMITDGPHGLRKAASDTGATDLYDSVPATCFPPAAGLASSWNPELVREVGE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  85 ALGSEAHDLDVNVLLGPGLNIKRNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELRRQASNSVV 164
Cdd:NF041610   82 AMGEECIQEKVAVILGPGVNIKRNPLGGRCFEYWSEDPYLAGHEAVGIVEGVQSKGVGTSLKHFAANNQETDRLRVSARV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 165 DERTMRELYLTGFEIAVREAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGGSNSAVAAVKAGGSLEM 244
Cdd:NF041610  162 SERALREIYLPAFEHIVKTAQPWTVMCAYNRINGVHSSQNRWLLTDVLRGEWGFDGIVMSDWGAVHDRVASLNAGLNLEM 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 245 PsPGFTSARELEgAVKAGTLSEADINARAAEVAKIAAATKlVGVGRNDLLKDdiAAAHHDVARKVAEGSSVLLKNDNATL 324
Cdd:NF041610  242 P-PSGTDDQIVE-AVRDGRLDPEQLDRMAQGMIDLVDKAR-PAMSRDGYRYD--VDAHDEIARRAAQESIVLLKNEDGIL 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 325 PFKAGTRVAVIGDMAATARYQGSGSSKVNATKEENILE-------EVKNAEGLVLAGYEQgydrqgkaDRVLVEDAVALA 397
Cdd:NF041610  317 PLAKGAKIAVIGEFARTPRYQGGGSSHITPTRMTSFLDalaergiDADFAPGFTLDDAPQ--------DPALTDEAVAAA 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 398 gkESVDVVLAVVGLDERSESEGLDRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVEL-PWIDDVAAVLYVGLSGQAG 476
Cdd:NF041610  389 --RGADTVLLFLGLPEEAESEGFDRTTLDLPAKQIELLEAVAAVNPNVVVVLSNGSVVSVaPWRDQAKGILESWLLGQAG 466

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 477 ASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPAIGRDAIYREGPFVGYRYYETAGVPVRFPFGYGLSYSTFTYSAA 556
Cdd:NF041610  467 GAALADVLFGDVNPSGKLAQTIPLDLEDDPSMVNWPGEEGHVDYGEGVFVGYRYYDTFDKPVAYPFGYGLSYATFEISDV 546

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 557 TAGENG-----IDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGFAKVSLAAHESKSVHIDFDRYTFRHFDVASNE 631
Cdd:NF041610  547 AVEKTGansarVSATVTNTSDVDGAETVQVYVAPGKADVARPVHELKGFAKVFLKAGESKEVSIDLDERAFAYWSERFDD 626

                         650       660       670
                  ....*....|....*....|....*....|
gi 1575455804 632 WKTETGEWTLMVGDNAEHLPLTIPRTVAGD 661
Cdd:NF041610  627 WHVEAGTYGIEVGTSSRDIAATVDVELDGD 656
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
27-411 2.93e-104

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 328.97  E-value: 2.93e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  27 DRADIPSFVMSDGPHGVRRQlgegdhlgigASKPATCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNIK 106
Cdd:COG1472    50 TRLGIPLLIGTDAEHGVANR----------PAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDIN 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 107 RNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELR-RQASNSVVDERTMRELYLTGFEIAVReAK 185
Cdd:COG1472   120 RDPRWGRNFESFGEDPYLVGRMAAAYVRGLQGNGVAATAKHFAGHGDEETgRHTGPVDVSERELREIYLPPFEAAIK-AG 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 186 PLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGG----------SNSAVAAVKAGGSLEMPSPGFTSAReL 255
Cdd:COG1472   199 VASVMTAYNALNGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAmgglaehydpAEAAVLALNAGLDLEMPGGKAFIAA-L 277

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 256 EGAVKAGTLSEADINA------RaaevakiaaaTKL-VGVGRNDLLKDDIA------AAHHDVARKVAEGSSVLLKNDNA 322
Cdd:COG1472   278 LEAVESGELSEERIDEavrrilR----------LKFrLGLFDDPYVDPERAaevvgsPEHRALAREAARESIVLLKNDNG 347

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 323 TLPFKA----GTRVAVIGDMAATARYQGSGSSKVNATKEENILEEVKNAEGLVLAGYEQGYDRQGKADRVLVEDAVALAG 398
Cdd:COG1472   348 LLPLAAlaagGALAADAAAAAAAAAAAAAAAAAAAAAAAAAALLEAAAGADAALALAAAAAALLLVAAAALVAVVALAAA 427

                         410
                  ....*....|...
gi 1575455804 399 KESVDVVLAVVGL 411
Cdd:COG1472   428 LAVLLLLVLGVAV 440
PRK15098 PRK15098
beta-glucosidase BglX;
28-644 3.61e-87

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 292.74  E-value: 3.61e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  28 RADIPSFVMSDGPHGVRrqlgegdhlgigaskpaTCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNIKR 107
Cdd:PRK15098  101 RLKIPLFFAYDVVHGQR-----------------TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISR 163

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 108 NPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSN------GISACPKHFAVNSQELRRQASNSV-VDERTMRELYLTGFEIA 180
Cdd:PRK15098  164 DPRWGRASEGFGEDTYLTSIMGKTMVKAMQGKspadrySVMTSVKHFALYGAVEGGRDYNTVdMSPQRMFNDYLPPYKAG 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 181 VrEAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWG-------------GSNSAVAAVKAGGSLEMPSP 247
Cdd:PRK15098  244 L-DAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGaikelikhgvaadPEDAVRLALKSGIDMSMSDE 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 248 GFtsARELEGAVKAGTLSEADI--------NARAAEVAKIAAATKLvGVGRNDLlKDDIAAA--HHDVARKVAEGSSVLL 317
Cdd:PRK15098  323 YY--SKYLPGLVKSGKVTMAELddavrhvlNVKYDMGLFNDPYSHL-GPKESDP-VDTNAESrlHRKEAREVARESLVLL 398

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 318 KNDNATLPFKAGTRVAVIGDMAATAR-YQGSGSSKVNATKEENILEEVKNAEG----LVLA------------GYEQGYD 380
Cdd:PRK15098  399 KNRLETLPLKKSGTIAVVGPLADSQRdVMGSWSAAGVADQSVTVLQGIKNAVGdkakVLYAkganvtddkgiiDFLNQYE 478

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 381 RQGKAD----RVLVEDAVALAgKESvDVVLAVVGldersESEGL-----DRSTMAIPQVQNDLVEALKGAGKPIVVVLVA 451
Cdd:PRK15098  479 EAVKVDprspQAMIDEAVQAA-KQA-DVVVAVVG-----EAQGMaheasSRTDITIPQSQRDLIAALKATGKPLVLVLMN 551

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 452 GSPVELPWIDDVA-AVLYVGLSGQAGASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPAIGRDaiYREGPFVGY-- 528
Cdd:PRK15098  552 GRPLALVKEDQQAdAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRP--YNPDKPNKYts 629

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 529 RYYETAGVPVrFPFGYGLSYSTFT-----YSAATAGENG---IDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGF 600
Cdd:PRK15098  630 RYFDEANGPL-YPFGYGLSYTTFTvsdvkLSSPTMKRDGkvtASVTVTNTGKREGATVVQLYLQDVTASMSRPVKELKGF 708

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....
gi 1575455804 601 AKVSLAAHESKSVHIDFDRYTFRHFDvASNEWKTETGEWTLMVG 644
Cdd:PRK15098  709 EKIMLKPGETQTVSFPIDIEALKFWN-QQMKYVAEPGKFNVFIG 751
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
 315-548 1.76e-53

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 184.44  E-value: 1.76e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 315 VLLKNDNATLPF-KAGTRVAVIGDMAATARYQGSGSSKVNATKEENILEEVKNAEGLVLA-GYEQGYDRQGKADRVLVED 392
Cdd:pfam01915   2 VLLKNENGLLPLpKKAKKIAVIGPNADDPPNGGGGSGTGNPPYLVTPLDGIRARAGDLYAdGAHLTVILSNGTADDDAGI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 393 AVALAGKESVDVVLAVVGLDERSESEGLDRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVEL-PWIDD-VAAVLYVG 470
Cdd:pfam01915  82 AEAVAAAKDADVAIVFVGLDPETEGEGYDRTDLALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMePWAEEnVDAILAAW 161

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1575455804 471 LSGQAGASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPaigrdaiyregpfvgyryyetagVPVRFPFGYGLSY 548
Cdd:pfam01915 162 YPGQEGGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPL-----------------------LPDLYPEGYGLSY 216
 
Name Accession Description Interval E-value
alph_arabinopyran NF041610
exo-alpha-(1->6)-L-arabinopyranosidase;
5-661 0e+00

exo-alpha-(1->6)-L-arabinopyranosidase;


Pssm-ID: 469494 [Multi-domain]  Cd Length: 738  Bit Score: 632.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804   5 ELSVVEKAAMLSGGSEWDSRGNDRADIPSFVMSDGPHGVRRQLGEGDHLGIGASKPATCFPTAGTVANSWDPALAEEMGE 84
Cdd:NF041610    2 DLTLEEKASLTSGADAWHLQGVESKGIPGYMITDGPHGLRKAASDTGATDLYDSVPATCFPPAAGLASSWNPELVREVGE 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  85 ALGSEAHDLDVNVLLGPGLNIKRNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELRRQASNSVV 164
Cdd:NF041610   82 AMGEECIQEKVAVILGPGVNIKRNPLGGRCFEYWSEDPYLAGHEAVGIVEGVQSKGVGTSLKHFAANNQETDRLRVSARV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 165 DERTMRELYLTGFEIAVREAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGGSNSAVAAVKAGGSLEM 244
Cdd:NF041610  162 SERALREIYLPAFEHIVKTAQPWTVMCAYNRINGVHSSQNRWLLTDVLRGEWGFDGIVMSDWGAVHDRVASLNAGLNLEM 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 245 PsPGFTSARELEgAVKAGTLSEADINARAAEVAKIAAATKlVGVGRNDLLKDdiAAAHHDVARKVAEGSSVLLKNDNATL 324
Cdd:NF041610  242 P-PSGTDDQIVE-AVRDGRLDPEQLDRMAQGMIDLVDKAR-PAMSRDGYRYD--VDAHDEIARRAAQESIVLLKNEDGIL 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 325 PFKAGTRVAVIGDMAATARYQGSGSSKVNATKEENILE-------EVKNAEGLVLAGYEQgydrqgkaDRVLVEDAVALA 397
Cdd:NF041610  317 PLAKGAKIAVIGEFARTPRYQGGGSSHITPTRMTSFLDalaergiDADFAPGFTLDDAPQ--------DPALTDEAVAAA 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 398 gkESVDVVLAVVGLDERSESEGLDRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVEL-PWIDDVAAVLYVGLSGQAG 476
Cdd:NF041610  389 --RGADTVLLFLGLPEEAESEGFDRTTLDLPAKQIELLEAVAAVNPNVVVVLSNGSVVSVaPWRDQAKGILESWLLGQAG 466

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 477 ASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPAIGRDAIYREGPFVGYRYYETAGVPVRFPFGYGLSYSTFTYSAA 556
Cdd:NF041610  467 GAALADVLFGDVNPSGKLAQTIPLDLEDDPSMVNWPGEEGHVDYGEGVFVGYRYYDTFDKPVAYPFGYGLSYATFEISDV 546

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 557 TAGENG-----IDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGFAKVSLAAHESKSVHIDFDRYTFRHFDVASNE 631
Cdd:NF041610  547 AVEKTGansarVSATVTNTSDVDGAETVQVYVAPGKADVARPVHELKGFAKVFLKAGESKEVSIDLDERAFAYWSERFDD 626

                         650       660       670
                  ....*....|....*....|....*....|
gi 1575455804 632 WKTETGEWTLMVGDNAEHLPLTIPRTVAGD 661
Cdd:NF041610  627 WHVEAGTYGIEVGTSSRDIAATVDVELDGD 656
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
27-411 2.93e-104

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 328.97  E-value: 2.93e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  27 DRADIPSFVMSDGPHGVRRQlgegdhlgigASKPATCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNIK 106
Cdd:COG1472    50 TRLGIPLLIGTDAEHGVANR----------PAGGATVFPQAIALAATWDPELAERVGRAIAREARALGINWNLAPVVDIN 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 107 RNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELR-RQASNSVVDERTMRELYLTGFEIAVReAK 185
Cdd:COG1472   120 RDPRWGRNFESFGEDPYLVGRMAAAYVRGLQGNGVAATAKHFAGHGDEETgRHTGPVDVSERELREIYLPPFEAAIK-AG 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 186 PLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGG----------SNSAVAAVKAGGSLEMPSPGFTSAReL 255
Cdd:COG1472   199 VASVMTAYNALNGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAmgglaehydpAEAAVLALNAGLDLEMPGGKAFIAA-L 277

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 256 EGAVKAGTLSEADINA------RaaevakiaaaTKL-VGVGRNDLLKDDIA------AAHHDVARKVAEGSSVLLKNDNA 322
Cdd:COG1472   278 LEAVESGELSEERIDEavrrilR----------LKFrLGLFDDPYVDPERAaevvgsPEHRALAREAARESIVLLKNDNG 347

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 323 TLPFKA----GTRVAVIGDMAATARYQGSGSSKVNATKEENILEEVKNAEGLVLAGYEQGYDRQGKADRVLVEDAVALAG 398
Cdd:COG1472   348 LLPLAAlaagGALAADAAAAAAAAAAAAAAAAAAAAAAAAAALLEAAAGADAALALAAAAAALLLVAAAALVAVVALAAA 427

                         410
                  ....*....|...
gi 1575455804 399 KESVDVVLAVVGL 411
Cdd:COG1472   428 LAVLLLLVLGVAV 440
PRK15098 PRK15098
beta-glucosidase BglX;
28-644 3.61e-87

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 292.74  E-value: 3.61e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  28 RADIPSFVMSDGPHGVRrqlgegdhlgigaskpaTCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNIKR 107
Cdd:PRK15098  101 RLKIPLFFAYDVVHGQR-----------------TVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISR 163

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 108 NPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSN------GISACPKHFAVNSQELRRQASNSV-VDERTMRELYLTGFEIA 180
Cdd:PRK15098  164 DPRWGRASEGFGEDTYLTSIMGKTMVKAMQGKspadrySVMTSVKHFALYGAVEGGRDYNTVdMSPQRMFNDYLPPYKAG 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 181 VrEAKPLTIMTSYNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWG-------------GSNSAVAAVKAGGSLEMPSP 247
Cdd:PRK15098  244 L-DAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGaikelikhgvaadPEDAVRLALKSGIDMSMSDE 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 248 GFtsARELEGAVKAGTLSEADI--------NARAAEVAKIAAATKLvGVGRNDLlKDDIAAA--HHDVARKVAEGSSVLL 317
Cdd:PRK15098  323 YY--SKYLPGLVKSGKVTMAELddavrhvlNVKYDMGLFNDPYSHL-GPKESDP-VDTNAESrlHRKEAREVARESLVLL 398

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 318 KNDNATLPFKAGTRVAVIGDMAATAR-YQGSGSSKVNATKEENILEEVKNAEG----LVLA------------GYEQGYD 380
Cdd:PRK15098  399 KNRLETLPLKKSGTIAVVGPLADSQRdVMGSWSAAGVADQSVTVLQGIKNAVGdkakVLYAkganvtddkgiiDFLNQYE 478

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 381 RQGKAD----RVLVEDAVALAgKESvDVVLAVVGldersESEGL-----DRSTMAIPQVQNDLVEALKGAGKPIVVVLVA 451
Cdd:PRK15098  479 EAVKVDprspQAMIDEAVQAA-KQA-DVVVAVVG-----EAQGMaheasSRTDITIPQSQRDLIAALKATGKPLVLVLMN 551

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 452 GSPVELPWIDDVA-AVLYVGLSGQAGASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPAIGRDaiYREGPFVGY-- 528
Cdd:PRK15098  552 GRPLALVKEDQQAdAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRP--YNPDKPNKYts 629

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 529 RYYETAGVPVrFPFGYGLSYSTFT-----YSAATAGENG---IDVMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGF 600
Cdd:PRK15098  630 RYFDEANGPL-YPFGYGLSYTTFTvsdvkLSSPTMKRDGkvtASVTVTNTGKREGATVVQLYLQDVTASMSRPVKELKGF 708

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....
gi 1575455804 601 AKVSLAAHESKSVHIDFDRYTFRHFDvASNEWKTETGEWTLMVG 644
Cdd:PRK15098  709 EKIMLKPGETQTVSFPIDIEALKFWN-QQMKYVAEPGKFNVFIG 751
PLN03080 PLN03080
Probable beta-xylosidase; Provisional
 6-649 9.05e-68

Probable beta-xylosidase; Provisional


Pssm-ID: 178629 [Multi-domain]  Cd Length: 779  Bit Score: 239.76  E-value: 9.05e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804   6 LSVVEKAAMLSGgsewDSRGNDRADIPSFVM-SDGPHGVRRQlGEGDHLGIGASKPATCFPTAGTVANSWDPALAEEMGE 84
Cdd:PLN03080   60 LTLDEKIAQLSN----TAAGVPRLGIPPYEWwSESLHGLADN-GPGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGS 134

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  85 ALGSEAHDLdVNV------LLGPGLNIKRNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNG--------------ISAC 144
Cdd:PLN03080  135 AIAVEARAM-YNAgqagltFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKwkkvrddgedgklmLSAC 213

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 145 PKHFAVNSQE----LRRQASNSVVDERTMRELYLTGFEIAVREAKPLTIMTSYNEINGVYAHENKHLLQEIlRDEWGFDG 220
Cdd:PLN03080  214 CKHYTAYDLEkwgnFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKA-RDEWGFQG 292

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 221 MVVSD----------WGGSNS---AVA-AVKAGGSLEMpspGFTSARELEGAVKAGTLSEADIN----------ARAAEV 276
Cdd:PLN03080  293 YITSDcdavatifeyQTYTKSpedAVAdVLKAGMDINC---GSYMLRHTQSAIEKGKVQEEDIDralfnlfsvqLRLGLF 369

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 277 AKIAAATKLVGVGRNDLLKDDiaaaHHDVARKVAEGSSVLLKNDNATLPFKAG--TRVAVIGDMAATARYQGSGSSKVnA 354
Cdd:PLN03080  370 DGDPRNGWYGKLGPNNVCTKE----HRELALEAARQGIVLLKNDKKFLPLNKSevSSLAIIGPMANDPYNLGGDYTGV-P 444

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 355 TKEENILEEVKnaeglvlAGYEQGYDRQGKADRVLVED-----AVALAGKesVDVVLAVVGLDERSESEGLDRSTMAIPQ 429
Cdd:PLN03080  445 CQPTTLFKGLQ-------AYVKKTSFAAGCKDVSCNSDtgfgeAIAIAKR--ADFVVVVAGLDLSQETEDHDRVSLLLPG 515

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 430 VQNDLVEALKGAG-KPIVVVLVAGSPVELPWIDD---VAAVLYVGLSGQAGASATVRALTGEINPSGHLAETW-PMHYED 504
Cdd:PLN03080  516 KQMDLISSVASVSkKPVVLVLTGGGPVDVSFAKQdprIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPMTWyPESFTA 595

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 505 CPSSgwypaigrDAIYREGPFVGY--RYYETAGVPVRFPFGYGLSYSTFTYSAATAGE---------------------- 560
Cdd:PLN03080  596 VPMT--------DMNMRADPSRGYpgRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKklslsrssvqdsisrkpllqrr 667

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 561 NGID------------------VMVSNDSDVAGSTVVQLYVRGPQGGVLRPDRELKGFAKVSLAAHESKSVHIDFDryTF 622
Cdd:PLN03080  668 DELDyvqiediasceslrfnvhISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVD--PC 745

                         730       740
                  ....*....|....*....|....*....
gi 1575455804 623 RHFDVASNEWK--TETGEWTLMVGDnAEH 649
Cdd:PLN03080  746 KHLSVANEEGKrvLPLGDHVLMLGD-LEH 773
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
 315-548 1.76e-53

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 184.44  E-value: 1.76e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 315 VLLKNDNATLPF-KAGTRVAVIGDMAATARYQGSGSSKVNATKEENILEEVKNAEGLVLA-GYEQGYDRQGKADRVLVED 392
Cdd:pfam01915   2 VLLKNENGLLPLpKKAKKIAVIGPNADDPPNGGGGSGTGNPPYLVTPLDGIRARAGDLYAdGAHLTVILSNGTADDDAGI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 393 AVALAGKESVDVVLAVVGLDERSESEGLDRSTMAIPQVQNDLVEALKGAGKPIVVVLVAGSPVEL-PWIDD-VAAVLYVG 470
Cdd:pfam01915  82 AEAVAAAKDADVAIVFVGLDPETEGEGYDRTDLALPGNQDALIKAVAAAGKPTVVVLHSGGPVEMePWAEEnVDAILAAW 161

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1575455804 471 LSGQAGASATVRALTGEINPSGHLAETWPMHYEDCPSSGWYPaigrdaiyregpfvgyryyetagVPVRFPFGYGLSY 548
Cdd:pfam01915 162 YPGQEGGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGPL-----------------------LPDLYPEGYGLSY 216
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
26-272 1.13e-41

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 154.87  E-value: 1.13e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  26 NDRADIPSFVMSDGPHGVRRQLGEGdhlgigaskpaTCFPTAGTVANSWDPALAEEMGEALGSEAHDLDVNVLLGPGLNI 105
Cdd:pfam00933  61 ESRLGIPLLVAVDQEGGRVQRFGEG-----------TMFPSAIALAATSDPDLAKQMGWAMAREMRALGIDWDFAPVVDV 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 106 KRNPLCGRNFEYYSEDPIVAGRMAAGLIRGIQSNGISACPKHFAVNSQELRRQASNSVVDERT---MRELYLTGFEIAVr 182
Cdd:pfam00933 130 ARDPRWGIGERSFSEDPQLVSALAGAMIEGLQGAGVLATVKHFPGHGHGATDSHKETPTTPRPeqrLRTVDLLPFQAAI- 208

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 183 EAKPLTIMTS---YNEINGVYAHENKHLLQEILRDEWGFDGMVVSDWGG----------SNSAVAAVKAGGSLEMPSPGF 249
Cdd:pfam00933 209 EAGVDAVMAAhviYSSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSmkgiadhggpAEAVRRALEAGVDIALVPEER 288

                         250       260
                  ....*....|....*....|...
gi 1575455804 250 TSAreLEGAVKAGTLSEADINAR 272
Cdd:pfam00933 289 TKY--LKKVVKNGKLPMARIDAA 309
Fn3-like pfam14310
Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is ...
 578-647 7.96e-26

Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.


Pssm-ID: 433860 [Multi-domain]  Cd Length: 70  Bit Score: 101.01  E-value: 7.96e-26
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 578 VVQLYVRGPQGGVLRPDRELKGFAKVSLAAHESKSVHIDFDRYTFRHFDVASNEWKTETGEWTLMVGDNA 647
Cdd:pfam14310   1 VVQLYVRDPVSSVGRPVKELKGFEKVELAPGESKTVTFTLDRRDLSFWDEDGQRWVVEPGEYEVLVGSSS 70
PRK05337 PRK05337
beta-hexosaminidase; Provisional
 62-225 2.35e-05

beta-hexosaminidase; Provisional


Pssm-ID: 235417 [Multi-domain]  Cd Length: 337  Bit Score: 47.46  E-value: 2.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804  62 TCFPTAGTVANSW--DPALAEEMGEALG----SE--AHDLDVN---VL-LGpglniKRNPLCG-RNFeyySEDPIVAGRM 128
Cdd:PRK05337   76 TRLPAMQSFGALWdrDPLEALKLAEEAGwlmaAElrACGIDLSfapVLdLD-----GISAVIGdRAF---HRDPQVVAAL 147

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1575455804 129 AAGLIRGIQSNGISACPKHF----AVnsqelrrQASNSV---VDERTMRelyltgfEIAVREAKPLTIMTSYNeINGVY- 200
Cdd:PRK05337  148 ASAFIDGMHAAGMAATGKHFpghgAV-------EADSHVetpVDERPLE-------EIRAEDMAPFRALIAAG-LDAVMp 212

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1575455804 201 AH-------EN-----KHLLQEILRDEWGFDGMVVSD 225
Cdd:PRK05337  213 AHviypqvdPRpagfsRYWLQDILRQELGFDGVIFSD 249
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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