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Conserved domains on  [gi|1569270109|gb|QBB01192|]
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cytochrome b, partial (mitochondrion) [Apomys sacobianus]

Protein Classification

cytochrome b( domain architecture ID 11475898)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 725.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00100    9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00100   89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00100  169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00100  249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00100  329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 725.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00100    9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00100   89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00100  169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00100  249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00100  329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-365 1.01e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 379.52  E-value: 1.01e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   3 IKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  83 FICLFLHVGRGMYYGSYTF-ME-TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:COG1290   100 FAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALH-FILPFIIAALVIVHLLFLHETGSNNPTG----LNSDADKIPFHPYYTIKDLLGALMLILLLMTLV 235
Cdd:COG1290   180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 236 LFFPDllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILAFLPFLHTSKQRSLMFRPIT 313
Cdd:COG1290   260 FFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1569270109 314 QVLYWMLAANLLILTWIGGQPVehPFIIIGQLASISYFSIILILMPISGIIE 365
Cdd:COG1290   338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-198 4.29e-99

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 291.96  E-value: 4.29e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSY--TFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWG 158
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1569270109 159 GFSVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSN 198
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
10-196 5.02e-90

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 268.48  E-value: 5.02e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  10 FIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  90 VGRGMYYG--SYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1569270109 168 TRFFALHFILPFIIAALVIVHLLFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 250-317 3.17e-07

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 49.41  E-value: 3.17e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1569270109 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHT-SKQRSLMFRPITQVLY 317
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVATTVF 133
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 725.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00100    9 PLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGAS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00100   89 MFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00100  169 SVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPD 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00100  249 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLL 328

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00100  329 VADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
CYTB MTH00119
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 664.68  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00119   10 PLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00119   90 MFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00119  170 SVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPN 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00119  250 LLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTL 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00119  330 VANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
CYTB MTH00131
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 654.80  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00131    9 PLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGAS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00131   89 FFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00131  169 SVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPN 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00131  249 LLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTL 328

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00131  329 VADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
CYTB MTH00074
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 636.72  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00074   10 PLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00074   90 FFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00074  170 SVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPN 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00074  250 LLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLL 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00074  330 VANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
CYTB MTH00191
cytochrome b; Provisional
 1-360 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 620.39  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00191    6 PLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGAS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00191   86 FFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGF 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00191  166 SVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPN 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00191  246 LLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLW 325

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPI 360
Cdd:MTH00191  326 VANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 3-358 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 601.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   3 IKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  83 FICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSV 162
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 163 DKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPDLL 242
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 243 GDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWMLAA 322
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1569270109 323 NLLILTWIGGQPVEHPFIIIGQLASISYFSIILILM 358
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00145
cytochrome b; Provisional
 1-366 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 575.70  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00145   10 PVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00145   90 FFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00145  170 SVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPN 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00145  250 LLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIF 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILmPISGIIED 366
Cdd:MTH00145  330 VGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWD 374
CYTB MTH00034
cytochrome b; Validated
 1-365 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 574.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00034    9 PLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGAS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00034   89 LFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGF 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00034  169 SVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPT 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00034  249 ALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLL 328

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIE 365
Cdd:MTH00034  329 IATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLE 373
CYTB MTH00016
cytochrome b; Validated
 1-361 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 544.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00016   10 PLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00016   90 FFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00016  170 SVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPN 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00016  250 ILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLL 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILIlMPIS 361
Cdd:MTH00016  330 VSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI-NPLL 369
CYTB MTH00022
cytochrome b; Validated
 1-366 8.02e-180

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 503.85  E-value: 8.02e-180
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00022    8 PLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGAS 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00022   88 LFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00022  168 SVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPN 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00022  248 LLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFL 327

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00022  328 IVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELEN 373
CYTB MTH00053
cytochrome b; Provisional
 1-366 1.49e-177

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 498.08  E-value: 1.49e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00053   10 PVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00053   90 MFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00053  170 SVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPY 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00053  250 SLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFL 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00053  330 VGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
CYTB MTH00224
cytochrome b; Provisional
 1-361 1.27e-171

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 482.88  E-value: 1.27e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:MTH00224   10 PAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGAS 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:MTH00224   90 MFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00224  170 AVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPN 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWML 320
Cdd:MTH00224  250 LFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLL 329

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPIS 361
Cdd:MTH00224  330 VTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAIS 370
CYTB MTH00033
cytochrome b; Provisional
 11-366 2.40e-132

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 383.52  E-value: 2.40e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  11 IDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHV 90
Cdd:MTH00033   16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  91 GRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATLTRF 170
Cdd:MTH00033   96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 171 FALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVL--FFPDLLGDPDNY 248
Cdd:MTH00033  176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 249 TPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWMLAANLLILT 328
Cdd:MTH00033  256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335

                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1569270109 329 WIGGQPV-EHPFIIIGQLASISYFSIILILMPISGIIED 366
Cdd:MTH00033  336 WIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-365 1.01e-130

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 379.52  E-value: 1.01e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   3 IKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMF 82
Cdd:COG1290    20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  83 FICLFLHVGRGMYYGSYTF-ME-TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGF 160
Cdd:COG1290   100 FAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 161 SVDKATLTRFFALH-FILPFIIAALVIVHLLFLHETGSNNPTG----LNSDADKIPFHPYYTIKDLLGALMLILLLMTLV 235
Cdd:COG1290   180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 236 LFFPDllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILAFLPFLHTSKQRSLMFRPIT 313
Cdd:COG1290   260 FFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1569270109 314 QVLYWMLAANLLILTWIGGQPVehPFIIIGQLASISYFSIILILMPISGIIE 365
Cdd:COG1290   338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 4-358 4.70e-116

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 340.76  E-value: 4.70e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   4 KIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFF 83
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  84 ICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVD 163
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 164 KATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDlLGALMLILLLMTLVLFFPDLLG 243
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 244 DPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQrslMFRPITQVLYWMLAAN 323
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1569270109 324 LLILTWIGGQPVEHPFIIIGQLASISYFSIILILM 358
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-198 4.29e-99

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 291.96  E-value: 4.29e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   1 PLIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGAS 80
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  81 MFFICLFLHVGRGMYYGSY--TFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWG 158
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1569270109 159 GFSVDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSN 198
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
10-196 5.02e-90

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 268.48  E-value: 5.02e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  10 FIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  90 VGRGMYYG--SYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATL 167
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1569270109 168 TRFFALHFILPFIIAALVIVHLLFLHETG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
CYTB MTH00046
cytochrome b; Validated
 2-356 6.24e-89

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 271.86  E-value: 6.24e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109   2 LIKIINHSFIDLPTPSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASM 81
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  82 FFICLFLHVGRGMYYGSYTFMETWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFS 161
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 162 VDKATLTRFFALHFILPFIIAALVIVHLLFLHETGSNNPTGL-NSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPD 240
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 241 LLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILaflpFLHTSKQRSLMFRpITQVLYWML 320
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFL----WVPTFNGSSVYSV-WRQVNFWLI 315

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1569270109 321 AANLLILTWIGGQPVEHPFIIIGQLASISYFSIILI 356
Cdd:MTH00046  316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 199-346 1.47e-47

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 158.19  E-value: 1.47e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 199 NPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 278
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1569270109 279 KLGGVLALILSILILAFLPFLHTSKQRSlMFRPITQVLYWMLAANLLILTWIGGQPVEHPFIIIGQLA 346
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
80-245 1.83e-43

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 148.16  E-value: 1.83e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  80 SMFFICLFLHVGRGMYYGSYTFME--TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIW 157
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 158 GGFSVDKATLTRFFALHF-ILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDLLGALMLILLLMTLVL 236
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1569270109 237 FFPDLLGDP 245
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
 25-200 2.51e-43

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 149.86  E-value: 2.51e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  25 FGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFME- 103
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 104 -TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATLTRFFALH-FILPFII 181
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 1569270109 182 AALVIVHLLFLHETGSNNP 200
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
250-350 1.10e-39

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 136.07  E-value: 1.10e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMFRPITQVLYWMLAANLLILTW 329
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1569270109 330 IGGQPVEHPFIIIGQLASISY 350
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
petB CHL00070
cytochrome b6
 16-200 3.21e-37

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 133.31  E-value: 3.21e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  16 PSNISSWWNFGSLLGLCLMIQIVTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMY 95
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569270109  96 YGSYTFME--TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTTLVEWIWGGFSVDKATLTRFFAL 173
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*...
gi 1569270109 174 H-FILPFIIAALVIVHLLFLHETGSNNP 200
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
petD CHL00058
cytochrome b6/f complex subunit IV
 250-313 4.05e-08

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 52.31  E-value: 4.05e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1569270109 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHTSKQRSLMF-RPIT 313
Cdd:CHL00058   65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVA 129
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 250-299 4.72e-08

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 52.10  E-value: 4.72e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1569270109 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFL 299
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFI 115
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 250-317 3.17e-07

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 49.41  E-value: 3.17e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1569270109 250 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAFLPFLHT-SKQRSLMFRPITQVLY 317
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVATTVF 133
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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