|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-152 |
9.35e-48 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 157.64 E-value: 9.35e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00156 79 FFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPylgtDLVQWIWGGF 158
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00156 159 SVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIdKIPFHPYFTFKDLVGFIIMLMLLILLTLI 235
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-156 |
3.24e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 115.27 E-value: 3.24e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNY-SFTYlP--LSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPG----LINWVC 73
Cdd:COG1290 98 LFFAAVYLHMFRGFFYgAYKK-PreLNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVigtwLVTWLF 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 74 GGFIINDPTLKRFFVLH-FIFPFVALAIVFIHIFFLHIQGSTNPLGY-----DTPLKIPFYP-NLLTLGVKGFNYVLVLF 146
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkktEKVDGVPFHPyYTVKDGFGFFVFLGVFA 256
|
170
....*....|
gi 1569122905 147 LFQSLFGIAP 156
Cdd:COG1290 257 LLAFFFPINP 266
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-114 |
3.00e-29 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 105.91 E-value: 3.00e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYS--FTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCG 74
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGsyKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPvigiTLVEWLWG 160
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1569122905 75 GFIINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGST 114
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
3-112 |
4.89e-24 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 92.06 E-value: 4.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYS--FTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:pfam00033 74 FLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPvigdTLVEWIWGSF 153
|
90 100 110
....*....|....*....|....*....|....*.
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQG 112
Cdd:pfam00033 154 SVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-152 |
9.35e-48 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 157.64 E-value: 9.35e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00156 79 FFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPylgtDLVQWIWGGF 158
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00156 159 SVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIdKIPFHPYFTFKDLVGFIIMLMLLILLTLI 235
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-152 |
1.27e-45 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 152.75 E-value: 1.27e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPG----LINWVCGGF 76
Cdd:MTH00145 90 FFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYvgkmLVEWVWGGF 169
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00145 170 SVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGdKVPFHPYYTIKDLVGFVVLLFLLVFLVLF 246
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-129 |
1.36e-44 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 150.05 E-value: 1.36e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00119 90 MFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPyigqTLVEWIWGGF 169
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYP 129
Cdd:MTH00119 170 SVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTdKIPFHP 223
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-152 |
3.38e-42 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 143.52 E-value: 3.38e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLL----YFIPGLINWVCGGF 76
Cdd:MTH00191 86 FFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLsaipYIGDDLVQWLWGGF 165
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDT-PLKIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00191 166 SVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSdSDKIPFHPYFSYKDILGFFILLFLLLFLVLF 242
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-152 |
1.27e-41 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 142.48 E-value: 1.27e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00131 89 FFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPyvgnTLVQWIWGGF 168
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00131 169 SVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDAdKISFHPYFSYKDLLGFAILLLALTSLALF 245
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-152 |
1.73e-41 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 142.08 E-value: 1.73e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNY-SFTYLPlSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGFI 77
Cdd:MTH00100 91 FICLFLHVGRGLYYgSYLFLE-TWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPyigtTLVEWIWGGFS 169
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1569122905 78 INDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDT-PLKIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00100 170 VDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSdSDKIPFHPYYTIKDILGLLLLILTLMLLVLF 245
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-152 |
7.06e-41 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 140.58 E-value: 7.06e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00016 90 FFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPyigkMLVQWLWGGF 169
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00016 170 SVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSdKVPFHPYYTSKDIVGFIVMLFLLLSVVLL 246
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-152 |
5.75e-39 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 135.58 E-value: 5.75e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00074 90 FFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPymgdTLVQWIWGGF 169
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDT-PLKIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00074 170 SVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSnPDKVPFHPYFSYKDLLGFLIMLTALALLSLF 246
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-152 |
7.68e-37 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 129.83 E-value: 7.68e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00034 89 LFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPyigtDIVQWIWGGF 168
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00034 169 SVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYdKVPFHTYFTTKDLVGFLILFAALSSLALL 245
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
3-152 |
6.48e-34 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 122.34 E-value: 6.48e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGFII 78
Cdd:MTH00224 92 FLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPyigkDLVEWIWGGFAV 171
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1569122905 79 NDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDT-PLKIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00224 172 DNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINAdSARIPFHPYYSIKDALGYLIAILLLSLMVLF 246
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
3-152 |
6.87e-34 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 122.12 E-value: 6.87e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGFII 78
Cdd:MTH00022 90 FLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPyvgtDIVQWVWGGFSV 169
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1569122905 79 NDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00022 170 SNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVdKVSFHVYYTSKDWYGIVVLFFLLSFIVYF 244
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-148 |
1.83e-31 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 115.42 E-value: 1.83e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00086 78 LFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPiwgpSIVMWIWGGF 157
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLG-YDTPLKIPFYPNLLTLGVKGFNYVLVLFLF 148
Cdd:MTH00086 158 GVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYcHGDYDKICFGPEYWNKDAYNIIFWLVFIIF 230
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-156 |
3.24e-31 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 115.27 E-value: 3.24e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNY-SFTYlP--LSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPG----LINWVC 73
Cdd:COG1290 98 LFFAAVYLHMFRGFFYgAYKK-PreLNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVigtwLVTWLF 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 74 GGFIINDPTLKRFFVLH-FIFPFVALAIVFIHIFFLHIQGSTNPLGY-----DTPLKIPFYP-NLLTLGVKGFNYVLVLF 146
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkktEKVDGVPFHPyYTVKDGFGFFVFLGVFA 256
|
170
....*....|
gi 1569122905 147 LFQSLFGIAP 156
Cdd:COG1290 257 LLAFFFPINP 266
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-153 |
5.21e-31 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 114.42 E-value: 5.21e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGFII 78
Cdd:MTH00053 92 FLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPyvgdDIVRWVWGGFSV 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 79 NDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYP-----NLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:MTH00053 172 SNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIdKIPFHYyyvlkDLYGAVILLIILSIIVFLFPYSL 251
|
.
gi 1569122905 153 G 153
Cdd:MTH00053 252 G 252
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-114 |
3.00e-29 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 105.91 E-value: 3.00e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYS--FTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCG 74
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGsyKKPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPvigiTLVEWLWG 160
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1569122905 75 GFIINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGST 114
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-156 |
1.32e-27 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 105.41 E-value: 1.32e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGFII 78
Cdd:MTH00033 88 FICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPsvggSIVEWIWGGFSV 167
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1569122905 79 NDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPLGY-DTPLKIPFYPNLLTLGVKGFnyvLVLFLFQSLFGIAP 156
Cdd:MTH00033 168 SNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLvGLSDRTAFHVYFTIKDILGF---LILFGVFVIIGIEP 243
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
3-112 |
4.89e-24 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 92.06 E-value: 4.89e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 3 FILTYLHILRGLNYS--FTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:pfam00033 74 FLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPvigdTLVEWIWGSF 153
|
90 100 110
....*....|....*....|....*....|....*.
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQG 112
Cdd:pfam00033 154 SVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-117 |
5.77e-22 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 89.66 E-value: 5.77e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLPLSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIP----GLINWVCGGF 76
Cdd:MTH00046 80 VLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPivgsLVYKYIVGGF 159
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1569122905 77 IINDPTLKRFFVLHFIFPFVALAIVFIHIFFLHIQGSTNPL 117
Cdd:MTH00046 160 SVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPL 200
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-157 |
8.10e-18 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 75.36 E-value: 8.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 1 FVFILTYLHILRGLNYSFTYLP--LSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPG----LINWVCG 74
Cdd:pfam13631 2 IFIAAIYVHMLRIFFTGAYRKPreLNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVvgtwLVWLLFG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 75 GFIINDPTLKRFFVLHF-IFPFVALAIVFIHIFFLHIQGSTNPLGYDTPL-KIPFYPNLLTLGVKGFNYVLVLFLFQSLF 152
Cdd:pfam13631 82 GPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVvGVPFWPVFAVKMLLFFLITVALLIGLAQI 161
|
....*
gi 1569122905 153 GIAPL 157
Cdd:pfam13631 162 NPIWL 166
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-117 |
2.37e-09 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 53.95 E-value: 2.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 23 LSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPGLINWV----CGGFIINDPTLKRFFVLH-FIFPFVA 97
Cdd:PRK03735 124 LNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIktllRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
90 100
....*....|....*....|
gi 1569122905 98 LAIVFIHIFFLHIQGSTNPL 117
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
23-117 |
9.98e-08 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 49.33 E-value: 9.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1569122905 23 LSWISGLVIFLIFIVTAFMGYVLPWGQMSFWGATVITNLLYFIPG----LINWVCGGFIINDPTLKRFFVLH-FIFPFVA 97
Cdd:CHL00070 116 LTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVigspLVELLRGSVSVGQSTLTRFYSLHtFVLPLLT 195
|
90 100
....*....|....*....|
gi 1569122905 98 LAIVFIHIFFLHIQGSTNPL 117
Cdd:CHL00070 196 AVFMLMHFLMIRKQGISGPL 215
|
|
|