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Conserved domains on  [gi|156765994|ref|YP_001434552|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Bactrocera carambolae]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 7.35e-158

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 442.67  E-value: 7.35e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 243 CVIFLGCDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 7.35e-158

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 442.67  E-value: 7.35e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 243 CVIFLGCDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
11-302 3.10e-101

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 299.00  E-value: 3.10e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   11 LILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLVAW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   91 LCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGSYNILD 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  169 FFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFCVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  249 ------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFII 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 1.35e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 290.88  E-value: 1.35e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   1 MEFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:COG1005    6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  81 FSLFLSLVAWLCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFV 158
Cdd:COG1005   86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 159 FLIGSYNILDFFYYQKSIWFLVILFPISLVWFCIC-LAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILF 237
Cdd:COG1005  166 LLAGSLNLSEIVEAQAGGLWFILPQPLAFVVFFIAaLAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 238 MSMLFCVIFLG-------CDVFN-----VMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLK 305
Cdd:COG1005  246 VSALATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                 ...
gi 156765994 306 LML 308
Cdd:COG1005  326 LLF 328
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
4-308 5.57e-49

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 166.42  E-value: 5.57e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGsLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIF-- 81
Cdd:NF040610  11 IRGLVG-LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVam 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  82 -SLFLSLVAW---------LCIPLFVKlfSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMA 151
Cdd:NF040610  90 gSVFLMLVAIpfgaviingVEYPLVVT--NMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLG 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 152 LVLLSFVFLIGSYNILDFFYYQKSIWFlVILFPISLVWFCICL-AETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMA 230
Cdd:NF040610 168 ICVVSVAIMAGSLNIVEIVEAQSPIWF-AFLQPIGFIVFFIALmADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFA 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 231 EYASILFMSMLFCVIFLG-----CDVFNVM----------FYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSL 295
Cdd:NF040610 247 EYIHLILGSFLVVLLFLGgwnlpGFVTDIPvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326

                        330
                 ....*....|...
gi 156765994 296 NFLLFIIGLKLML 308
Cdd:NF040610 327 LNLGWAIALGLYL 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 3-308 7.35e-158

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 442.67  E-value: 7.35e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 243 CVIFLGCDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 4-306 2.24e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 400.95  E-value: 2.24e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  84 FLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGS 163
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 164 YNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156765994 244 VIFLGC--DVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKL 306
Cdd:MTH00225 241 ILFFGGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 4-304 5.35e-130

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 372.28  E-value: 5.35e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  84 FLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGS 163
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 164 YNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 244 VIFLGCDVF-----NVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGL 304
Cdd:MTH00143 241 VLFFGGSSVlfllgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-308 4.79e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 339.58  E-value: 4.79e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 243 CVIFLGCDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-308 6.57e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 331.71  E-value: 6.57e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSL 83
Cdd:MTH00195   2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  84 FLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGS 163
Cdd:MTH00195  82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 164 YNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFC 243
Cdd:MTH00195 162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156765994 244 VIFLGCDVfNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00195 242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-309 2.14e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 330.81  E-value: 2.14e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   1 MEFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:MTH00071   2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  81 FSLFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFL 160
Cdd:MTH00071  82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 161 IGSYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00071 162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 241 LFCVIFLGCDVFNVM-------FYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLMLI 309
Cdd:MTH00071 242 LSTILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-308 3.00e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 330.32  E-value: 3.00e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   1 MEFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:MTH00111   2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  81 FSLFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFL 160
Cdd:MTH00111  82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 161 IGSYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00111 162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156765994 241 LFCVIFLG-------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00111 242 LTTILFLNpstlnlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISL 316
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-308 8.19e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 321.57  E-value: 8.19e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   7 IIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLS 86
Cdd:MTH00104   3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  87 LVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGSYNI 166
Cdd:MTH00104  83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 167 LDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFCVIF 246
Cdd:MTH00104 163 STLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILF 242

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 156765994 247 LGC-------DVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00104 243 LGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-308 2.05e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 318.09  E-value: 2.05e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00134   5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00134  85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00134 165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156765994 243 CVIFLGCDVF---------NVMfyVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00134 245 AILFLGASHIptlpelttiNLM--TKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-308 1.01e-107

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 316.53  E-value: 1.01e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   1 MEFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  81 FSLFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFL 160
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 161 IGSYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 241 LFCVIFLGCD-------VFNVMFY-VKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLML 308
Cdd:MTH00040 241 LSVILFLGGGspfneifPINIIIVgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 3-309 2.78e-106

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 312.49  E-value: 2.78e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVicvLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00010   5 FFISILLSYVMA---LLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMS 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIG 162
Cdd:MTH00010  82 LILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQ 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 163 SYNILDFFYYQKSiWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLF 242
Cdd:MTH00010 162 TFSFSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFT 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 156765994 243 CVIFLGCD----VFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKLMLI 309
Cdd:MTH00010 241 SVFFTSFIpsifISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NADHdh pfam00146
NADH dehydrogenase;
11-302 3.10e-101

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 299.00  E-value: 3.10e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   11 LILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLVAW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   91 LCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGSYNILD 168
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  169 FFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFCVIFLG 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  249 ------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFII 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-308 1.35e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 290.88  E-value: 1.35e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   1 MEFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPI 80
Cdd:COG1005    6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  81 FSLFLSLVAWLCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFV 158
Cdd:COG1005   86 LAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 159 FLIGSYNILDFFYYQKSIWFLVILFPISLVWFCIC-LAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILF 237
Cdd:COG1005  166 LLAGSLNLSEIVEAQAGGLWFILPQPLAFVVFFIAaLAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 238 MSMLFCVIFLG-------CDVFN-----VMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLK 305
Cdd:COG1005  246 VSALATTLFLGgwlgpfpILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325


                 ...
gi 156765994 306 LML 308
Cdd:COG1005  326 LLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 7-304 3.27e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 279.69  E-value: 3.27e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   7 IIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLS 86
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  87 LVAWLCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGSY 164
Cdd:MTH00054  85 FIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 165 NILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFCV 244
Cdd:MTH00054 165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 245 IFLGCDVF----------NVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGL 304
Cdd:MTH00054 245 LFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-304 1.03e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 275.85  E-value: 1.03e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   2 EFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIF 81
Cdd:MTH00216   4 FIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  82 SLFLSLVAWLCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVF 159
Cdd:MTH00216  84 SFTLALIVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 160 LIGSYNILDFFYYQKS-IWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFM 238
Cdd:MTH00216 164 CVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILM 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156765994 239 SMLFCVIFLG--------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGL 304
Cdd:MTH00216 244 SCLTTILFLGgwlspikyFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
3-304 6.02e-90

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 270.91  E-value: 6.02e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPLF--VKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFL 160
Cdd:PRK06076  89 FIPAFLAWAVIPFGpeLVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 161 IGSYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSM 240
Cdd:PRK06076 169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156765994 241 LFCVIFLG----------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGL 304
Cdd:PRK06076 249 LITTLFLGgwlppfplggGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-304 8.06e-75

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 233.37  E-value: 8.06e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   3 FILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFS 82
Cdd:MTH00029   6 YITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIIS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  83 LFLSLVAWLCIPL--FVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFL 160
Cdd:MTH00029  86 FTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILC 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 161 IGSYNILDFFYYQKSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSM 240
Cdd:MTH00029 166 VGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSC 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 241 LFCVIFLG-----------------------CDVFNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNF 297
Cdd:MTH00029 246 MMTIFFLGgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGL 325


                 ....*..
gi 156765994 298 LLFIIGL 304
Cdd:MTH00029 326 VILTAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-306 3.91e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 208.98  E-value: 3.91e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  11 LILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIFSLFLSLVAW 90
Cdd:MTH00090   3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  91 LCIPLFVKLFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLIGSYnildFF 170
Cdd:MTH00090  83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF----SF 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 171 YYQKSIWFLVILFPislvWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFMSMLFCVIFLGcd 250
Cdd:MTH00090 159 VSSFSLSLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 156765994 251 vfnvMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFIIGLKL 306
Cdd:MTH00090 233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 4-302 3.24e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.18  E-value: 3.24e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYpllsnyiSYYFSPIFSL 83
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVY-------GFQSRSWFSL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  84 FLSLVAWLCIPLFVKLFSF-------NLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLS 156
Cdd:MTH00058  74 FGVFLLVLLVVFYCFIYGSyysgsysSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIF 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 157 FVFLIGSYNILDFFYyqkSIWFLVILFPISLVWFCIC-LAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASI 235
Cdd:MTH00058 154 CGLCYGSYSLVDFYY---SGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLII 230

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 156765994 236 LFMSMLFCVIFLGcdvfNVMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFII 302
Cdd:MTH00058 231 FIFSWLGSVLFFG----GGFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
4-308 5.57e-49

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 166.42  E-value: 5.57e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGsLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIF-- 81
Cdd:NF040610  11 IRGLVG-LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVam 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  82 -SLFLSLVAW---------LCIPLFVKlfSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMA 151
Cdd:NF040610  90 gSVFLMLVAIpfgaviingVEYPLVVT--NMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLG 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 152 LVLLSFVFLIGSYNILDFFYYQKSIWFlVILFPISLVWFCICL-AETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMA 230
Cdd:NF040610 168 ICVVSVAIMAGSLNIVEIVEAQSPIWF-AFLQPIGFIVFFIALmADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFA 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 231 EYASILFMSMLFCVIFLG-----CDVFNVM----------FYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSL 295
Cdd:NF040610 247 EYIHLILGSFLVVLLFLGgwnlpGFVTDIPvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326

                        330
                 ....*....|...
gi 156765994 296 NFLLFIIGLKLML 308
Cdd:NF040610 327 LNLGWAIALGLYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-309 3.72e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 141.24  E-value: 3.72e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   2 EFILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYISYYFSPIF 81
Cdd:CHL00032  25 GLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSI 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  82 SLFLSLVAWLCIPLFVKLF--SFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVF 159
Cdd:CHL00032 105 AVISILLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 160 LIGSYNILDFFYYQKSIWFL---VILFPISLVWFCIC-LAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASI 235
Cdd:CHL00032 185 LSNSLSTVDIVEAQSKYGFWgwnLWRQPIGFIVFLISsLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL 264

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 236 LFMSMLFCVIFLG--------------------CDVFNVMFYVKLT-----FISFVFIWARGTLPRFRYDKLMYLAWKSF 290
Cdd:CHL00032 265 LVSSLFVTVLYLGgwnlsipyifipelfeinktGGVFGTTIGIFITlaktyLFLFISITTRWTLPRLRMDQLLNLGWKFL 344

                        330
                 ....*....|....*....
gi 156765994 291 LPFSLNFLLFIIGLKLMLI 309
Cdd:CHL00032 345 LPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-302 1.23e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 117.21  E-value: 1.23e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994   4 ILSIIGSLILVICVLVSVAFLTLLERKVLGYIQIRKGPnkvglmGIPQPFCDAIKLFTKEQTYPLLSNYIsYYFSPIFSL 83
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994  84 FLSLVAWLCIPLFVK--LFSFNLGLLFFLCCTSLGVYTVMIAGWSSNSNYALLGGLRAVAQTISYEVSMALVLLSFVFLI 161
Cdd:COG0650   74 AAMLLAALLVPVLTTgpPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 162 GSYNILDFFYYQ---KSIWFLVILFPISLVWFCICLAETNRTPFDFAEGESELVSGFNIEYSSGGFALIFMAEYASILFM 238
Cdd:COG0650  154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156765994 239 SMLFCVIFLGCDVFN------VMFYVKLTFISFVFIWARGTLPRFRYDKLMYLAWKSFLPFSLNFLLFII 302
Cdd:COG0650  234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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