|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.04e-171 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 480.86 E-value: 1.04e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 TGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHINKT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 156523757 321 TNPMIATLTSLSALLLPLSPMILASI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
3.36e-136 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 391.09 E-value: 3.36e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 TGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSlNPNLLVLMAIS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHINKT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 156523757 321 TNPM 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
1.73e-131 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 378.88 E-value: 1.73e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 TGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHINKT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*
gi 156523757 321 TNPMI 325
Cdd:MTH00070 321 TNNLL 325
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
4.28e-120 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 349.91 E-value: 4.28e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 TGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHINKT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
....*
gi 156523757 321 TNPMI 325
Cdd:MTH00105 321 KPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
3.12e-98 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 294.57 E-value: 3.12e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 TGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNHMKQW 315
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSW 315
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
10-307 |
7.47e-91 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 275.66 E-value: 7.47e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQL 89
Cdd:MTH00041 10 ITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGP 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 90 TNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAISSAALGGWMG 169
Cdd:MTH00041 90 LNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 170 LNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSLNAALMLTLL 249
Cdd:MTH00041 170 LNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSIL 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 156523757 250 SLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPN 307
Cdd:MTH00041 250 SLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
6-325 |
5.71e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 203.52 E-value: 5.71e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 6 KLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWhtgqwd 85
Cdd:MTH00160 7 KLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 86 ITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILfltSHSLNPNLLVLMAISSAALG 165
Cdd:MTH00160 81 NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIILSAIIG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 166 GWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSLNAALM 245
Cdd:MTH00160 158 AIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAyYSTITLPPNPTNHMKQWHINKTTNPMI 325
Cdd:MTH00160 238 LNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKKKNKFSLILN 316
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
5.46e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 187.79 E-value: 5.46e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 5 AKLVSLFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 85 DitqltnptSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPI-TILFLTSHSLNPNLLVLMAISSAA 163
Cdd:MTH00144 85 F--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 164 LGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNtTKSLKLSTTMTSWTKSPSLNAA 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 156523757 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-305 |
4.82e-48 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 164.57 E-value: 4.82e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 1 MTPHAKLVSLfSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTInawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 81 tgQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSPSL 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLP 305
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSP 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
10-302 |
1.51e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 144.81 E-value: 1.51e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTgqwditqL 89
Cdd:MTH00197 4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------Y 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 90 TNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHslNPNLLVLMAISSAALGGWMG 169
Cdd:MTH00197 77 LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 170 LNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTTKSLKLStTMTSWTKSPSLN-AALMLTL 248
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLN-QQYSNPESMSSNlVFLGLSF 233
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 156523757 249 LSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00197 234 LSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-299 |
3.32e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 144.49 E-value: 3.32e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLlGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQ 88
Cdd:COG1007 109 LFATL-GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 89 LTNPTSST------------LMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLST---------MMKFppITILFLTSH 147
Cdd:COG1007 188 IAAALAAGganspllllglvLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATapkiaafaaLLRL--LVEAFPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 148 SLNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTL--LTFYL--YTLMTTTVFLSLNT-T 222
Cdd:COG1007 266 ADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLlS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 223 KSLKLSTTMTSW----TKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAY 298
Cdd:COG1007 346 RKGGEAEEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
.
gi 156523757 299 Y 299
Cdd:COG1007 426 A 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-299 |
1.34e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 129.17 E-value: 1.34e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLlGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQ 88
Cdd:PRK05777 110 LFALL-GMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 89 LTNPTSST------------LMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMK---FPPIT----ILFLTSHSL 149
Cdd:PRK05777 189 IAKALADGsgnsllllfglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrllvVAFGGLSED 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 150 NPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTL--LTFYL--YTLMTTTVFLSLNTTKS- 224
Cdd:PRK05777 269 WQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRk 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 156523757 225 LKLSTTMTSWT----KSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYY 299
Cdd:PRK05777 349 GGEAESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.46e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 121.68 E-value: 1.46e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLI-SKSHHPRAVEAAIKYFLVQATASAMILFS-------------STINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 79 WHTGQWDITQLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFltSHSLNPNLLVLMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 159 ISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNP----KLTLLTFYLYTLMTTTVF---LSLNTTKSLKLSTTM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156523757 232 TSwTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRL 296
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
8.28e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 115.88 E-value: 8.28e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 88 QLTNPTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTshSLNPNLLVLMAISSAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI--GPVTNVVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 168 MGLNQTQVRKILGFSSISHLGWMTIIILYNP----KLTLLTFYLYTLMTTTVF---LSLNTTKSLKLSTTMTSwTKSPSL 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
9.58e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.82 E-value: 9.58e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 14 LLGTTITISSNHWVMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTNP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 93 TSST------------LMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMK---FPPITILFLTS----HSLNPNL 153
Cdd:TIGR01770 192 LSNGmlnisllllgivLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYIlfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 154 LVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTL--LTFYL--YTLMTTTVFLSLNTTKSLKLS- 228
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156523757 229 ----TTMTSWTKSPSLNAALM-LTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 ieyiSDFAGLFKTNPILAILIlIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
2.66e-27 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 108.55 E-value: 2.66e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 23 SNHWVMAWTGLEINTLAIIPLI-SKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTNPTSST----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 97 ------LMTTAIAMKLGLVPFHFWFPEVLQGSPM-ITALMLSTMMKFPPITI-----LFLTSHSLNPNLLVLMAISSAAL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 165 GGWMGLNQTQVRKILGFSSISHLGWMTIIIL----YNPKLTLLTFYLYTLMTTTVFL-----SLNTTKSLKLSTTMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 156523757 236 KSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-296 |
7.98e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 104.07 E-value: 7.98e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 9 SLFSLLL-GTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDIT 87
Cdd:COG0651 111 PLFLLLLaGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 88 QLTN----------PTSSTLMTTAIAMKLGLVPFHFWFPEVLQGSPM-ITALMLSTMMK-------------FPPITILF 143
Cdd:COG0651 191 DLAArlaeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSpVSALLSGLLTKvgvyailrvltllFGADPALF 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 144 LTshslnpNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLY----TLMTTTVFLS- 218
Cdd:COG0651 271 LG------TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAa 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 219 ---LNTTKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLR 295
Cdd:COG0651 345 gaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVR 424
|
.
gi 156523757 296 L 296
Cdd:COG0651 425 I 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.79e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 92.23 E-value: 1.79e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 15 LGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAV---------EAAIKYFLVQATASAMILFSSTINAWHTGQWD 85
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 86 ItqLTNPTSSTLMTT----------------AIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMMKFppITILFLTSHSL 149
Cdd:MTH00198 279 M--LGTILSATLETTnielrqgslgylfitvAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVI 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 150 NPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIII-------LYNPKLTLLTFYLYTLMTTTVFLSL--- 219
Cdd:MTH00198 355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLeef 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 220 ---------------NTTKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAM 284
Cdd:MTH00198 435 gtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYL 514
|
330
....*....|....*....
gi 156523757 285 LSLLGL-------FFYLRL 296
Cdd:MTH00198 515 VALFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
2.89e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.52 E-value: 2.89e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 51 RAVEAAIKYFLVQATASAMIL--FSST--INAWHTGQWDI------TQLTNPTSS----TLMTTAIAMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 117 EVLQGSPM-----------ITALMLSTMMkfppITILFLTSHSLNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSIS 185
Cdd:CHL00049 239 DVYEGSPTpvvaflsvtskVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 186 HLGWMTIIIL-------YNPKLTLLTFYLY----TLMTTTVFLSLNTTKSLKLSTTMtsWTKSPSLNAALMLTLLSLAGL 254
Cdd:CHL00049 315 QIGYVIIGIIvgdsndgYASMITYMLFYIFmnlgTFACIVLFGLRTGTDNIRDYAGL--YTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 156523757 255 PPLTGFLPK 263
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-298 |
7.07e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 75.39 E-value: 7.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 48 HHPRAVEAAIKYFLVQATASAMILFS--------STIN----AWHTGQWDITQLTNPTSSTLMTTAIAM---------KL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfGTLNmadlSAKIRGLSFPLTGGLAGNPPLALGVALalalwaftiKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 107 GLVPFHFWFPEVLQGSPMITALMLS---------TMMKFppITILFLTSHSLNP------NLLVLMAISSAALGGWMGLN 171
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSglvvnvgayAIIRF--LYTIFGISPSLIDfraalsPILIILGAVSAIIGALMMVV 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 172 QTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTL----------MTTTVFlsLNTTKSLKLSTTMTSWTKSPSLN 241
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHAAGTRDIDELAGLGRKMPIAS 393
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 156523757 242 AALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAY 298
Cdd:PRK12667 394 FAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.36e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 74.32 E-value: 1.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 50 PRAVEAAIKYFLVQATASAMILFSST----INAWHTGQWDITQ--LTNPT-----SSTLMTTAIAMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALalITSPSlglalALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 119 LQGSPMITALMLSTMMK---FPPITILFLTSHSLNPN----LLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKaagFALAIRLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 192 IIILYNPK--LTLLTFYL--YTLMTTTVFLSLnTTKSLKLSTTMTS-----WTKSPSLNAALMLTLLSLAGLPPLTGFLP 262
Cdd:PRK02504 317 IGLVAGTEagYASMVFYLlaYLFMNLGAFACV-ILFSLRTGTDQISdyaglYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 156523757 263 K 263
Cdd:PRK02504 396 K 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-311 |
5.60e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 69.52 E-value: 5.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLT-----NPTSST---LMTTAIAM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalaeNPTVVTafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 105 KLGLVPFHFWFPEVLQG-SPMITALMLSTMMK----------FPPITILFLTSHSLNPNLLVLMAISSAAlGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKvavyaliriyFTVFGGDFRFALGLGWLLAVLALLSMLV-GSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 174 QVRKILGFSSISHLGWMTIIILYNPKLTLL--TFYL--YTLMTTTVFLSLN----TTKSLKLSTTMTSWTKSPSLNAALM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156523757 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYSTITLPPNPTNH 311
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-308 |
1.94e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.81 E-value: 1.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 33 LEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQATASAMILFSSTI-----NAWHTGQWDITQLTNPTSS-----TLMTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAVKMSENPTVVakialALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 102 IAMKLGLVPFHFWFPEVLQGSPM-ITALMLstMMKFPPITILFLTSHSL-----NPN----LLVLMAISSAALGGWMGLN 171
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPSsISAMLL--VIKQAGLYALARVLFSIygpaiNLAtvgwVIIILGCLTMFVGVAMAVV 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 172 QTQVRKILGFSSISHLGWM------TIIILYNPKLT----------LLTFYLYTLMTTTVFLSLNT------TKSLK--- 226
Cdd:PRK08376 308 QKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAviyetgTRNLNelg 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 227 -LSTTMtswtksPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQelTKQEMAPAATIIAML-SLLGLFFYLRlAYYSTITL 304
Cdd:PRK08376 388 gLARTM------PKTTIAFLIGAAAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIgSVLTLASFVK-VFHTAFFG 458
|
....
gi 156523757 305 PPNP 308
Cdd:PRK08376 459 PPSE 462
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-288 |
2.33e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.64 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 38 LAIIP---LISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQW--DITQLTNPTSSTLMTTAI--------AM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLflaffiafAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 105 KLGLVPFHFWFPEVLQGSPMITALMLS-TMMKFP-------PITILFLTSHSLNPNLLVLmAISSAALGGWMGLNQTQVR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGgygllrfALPLFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 177 KILGFSSISHLGWMTI-IILYNPK-LTLLTFYL--YTLMTTTVFLSL----NTTKSLKLSTTMTSWTKSPSLNAALMLTL 248
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 156523757 249 LSLAGLPPLTGFLPKWLIIQELTKQemAPAATIIAMLSLL 288
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQV--NPWLAILAALGLI 418
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
4.43e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.54 E-value: 4.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 13 LLLGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATA------SAMILFSSTINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 87 TQLTNPT----------SSTLMTTAIAMKLGLVPFHFWFPEVLQGSP-MITALMLSTMMKFPPITILFLTS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 149 LNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 156523757 221 TTKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
1.11e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.19 E-value: 1.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 34 EINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQ-----LTNPTSSTLMTtAIAMKL-- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYG-GLLLLIfg 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 107 -----GLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITI------LFLTSHSLNPNLLVLMAISSAA--LGGWMGLNQT 173
Cdd:PRK06277 209 llygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIALSVLAmvFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 174 QVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYT----LMTTTVFLS----LNTTKSLKLSTTMTSWTKSPSLNAALM 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGagivSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156523757 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMaPAATIIAMLSLLGLFFYLRLAYYStITLPPNP 308
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANM-PELAIIMIIVSIGTFVSMMKAFYL-IYLKPKP 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-293 |
5.29e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.19 E-value: 5.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 53 VEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQL-----------TNPTSSTLMTTAIAMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 122 SPM-ITALMLSTMMK------FPPITILFLTSHSLNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTI-I 193
Cdd:PRK12663 236 PNTeVAALFAALLTKvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 194 ILYNPK-LTLLTFYLYTLMT--TTVFLSLNTTKSLKLSTTMTS----WTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLTGYRSLQYlgglYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|...
gi 156523757 267 IQ-ELTKQEMAPAAT-----IIAMLSLLGLFFY 293
Cdd:PRK12663 396 VQgALDNGAYILLALmlitsLITMYSLFRIFFL 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
5.42e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.39 E-value: 5.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 48 HHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQL----TNPTSSTLMTTAIAM-------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 117 EVLQGsPM-ITALMLS-TMMK---------FPpitiLFltshSLNPNLLVLMAI---SSAALGGWMGLNQTQVRKILGFS 182
Cdd:COG1009 236 DAMEG-PTpVSALLHAaTMVKagvyllarlSP----LF----ALSPVWLTVVAIigaITALFAALIALAQTDIKRVLAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 183 SISHLGWMTIIIlynpKLTLLTFYLYTLMTTTVFLSLnttksLKLS------TTMTS--------WTKSPSLNAALMLTL 248
Cdd:COG1009 307 TVSQLGYMFLAL----GVGAYVAALFHLLTHAFFKAL-----LFLGagsvihATGTRdirkmgglRKKMPITAITFLIGA 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 156523757 249 LSLAGLPPLTGFLPKWLIIQE-LTKQEMAPAATIIAML-SLLGLFFYLRLAY 298
Cdd:COG1009 378 LSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
5.91e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 54.18 E-value: 5.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 50 PRAVEAAIKYFLVQATASAMILFSSTINAW-HTGQWDITQLTNPTSSTLMTT--------AIAMKLGLVPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 119 ---LQGSPMITALMLST----MMKFpPITILFLTSHSLNPNLLVLMAIsSAALGGWMGLNQTQVRKILGFSSISHLGWMT 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMgtygFLRF-NLPLFPDASLYFAPVLAALGVI-AIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 192 IIILYNPKLTLL--TFYLYT--LMTTTVFLSLNT----TKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LGIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
250 260
....*....|....*....|....*
gi 156523757 264 WLIIQELTKqeMAPAATIIAMLSLL 288
Cdd:TIGR01972 390 FLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-289 |
1.56e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 53.08 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 34 EINTLA---IIPLISKshhpRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTN---PTSSTLMTTAIAM--- 104
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQgliNDTSTGFALIVFLfll 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 105 -----KLGLVPFHFWFPEVLQGSPMITALMLS------------TMMKFPPITILFLT-----SHSLNPNLLVLMAISSA 162
Cdd:PRK08668 204 afgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgaygflLVLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 163 ALGGWMGLNQTQVRKILGFSSISHLGW--MTIIILYNPKLTLLTFYLYT--LMTTTVFLSLNT----TKSLKLSTTMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYilVGLGLGTSLGFAGGLFHVFNhaLFKGLFFLIFAAviyrTGTTKISEMGGLI 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 156523757 235 TKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMApaatIIAMLSLLG 289
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMP----ITAFMAFFG 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.60e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.65 E-value: 1.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTN--PTSSTLMTTAIAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 111 FHFWFPEVLQGS-PMITALMLSTMMKFPPITILFLTSHSLNPNLLV-LMAISSAALGGWMGLNQTQVRKILGFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAePPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVrIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 189 WmtiiILYNPkltlLTFYLYTLMTTTVFLSLNTTKSLKLSTTMTSWTKSP---SLNAALMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 F----ILAAP----LVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMlgiGKWIPLTMASFSIAGFPLLAGFVSKVL 354
|
....*.
gi 156523757 266 IIQELT 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-288 |
5.82e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 51.08 E-value: 5.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLLgttiTISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSS----------TINAW 79
Cdd:PRK06458 118 LFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGE 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 80 HTGQW-DITQLTNPTSSTLMTTAIAM-------KLGLVPFHFWFPEVLQGSPMITALMLS---------TMMKFPPITIL 142
Cdd:PRK06458 194 MAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSgvllnvalyAVLRYYILIDA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 143 FLTSHSLnPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLM----TTTVFLS 218
Cdd:PRK06458 274 AIGSDFP-GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156523757 219 ----LNTTKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQElTKQEMAPAATIIAMLSLL 288
Cdd:PRK06458 353 sgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTA-GLARGPLLIAILLLLLLT 425
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
2.85e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.02 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 7 LVSLFSL-LLGTTITISSNHWVM---AWTGLEINTLAIIPLISKSHHPRAVEAAIKYFlvqatASAMILFSSTINAWHTG 82
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 83 QWDITQLTNPTSSTLMTTAIAMKLGLVPFHF--WFPEVLQGSPMITALMLSTMMK----FPPITILFLTSHSLNPNL-LV 155
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFgLT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 156 LMAIS--SAALGGWMGLNQTQVRKILGFSSISHLGWM-----TIIILYNPKLTLLTFYLYTLMT---------TTVFLSL 219
Cdd:PRK06459 229 ILAIGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSS 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 156523757 220 NTTKSLKLSTTMTSWTKSPSLNAALMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 309 GLQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-325 |
5.80e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.81 E-value: 5.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 6 KLVSLFSLLLGTTITI-SSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQW 84
Cdd:PRK12662 111 SFYSAFLLCLGGLLGIlVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 85 DITQLTN-----PTSSTL------MTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLS----TMMKFPPITI-------- 141
Cdd:PRK12662 191 NMGDMFLiiqdlPTNRAIqigvlfIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkan 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 142 LFLTSHSLNpNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLY----TLMTTTVFL 217
Cdd:PRK12662 271 FVFTTLPFN-NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFM 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 218 SLNTTK----SLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFY 293
Cdd:PRK12662 350 VSGSISyhfgTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYV 429
|
330 340 350
....*....|....*....|....*....|..
gi 156523757 294 LRLAYYstITLPPNPTNHMKQWHINKTTNPMI 325
Cdd:PRK12662 430 WKIVEA--LYFESRMVESKANDKAFKTPNAMV 459
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
9.61e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 47.22 E-value: 9.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 109 VPFHFWFPEVLQG-SPMITALMLSTMMKfPPITILFLTSHSLNPN-----LLVLMAISSAALGGWMGLNQTQVRKILGFS 182
Cdd:PRK12647 212 FPFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 183 SISHLGWMTIIILYNPKLTLLTFYLY----TLMTTTVFLSLNT----TKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGL 254
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|....*
gi 156523757 255 PPLTGFLPKWLIIQELTkqEMAPAATIIAMLSLLG 289
Cdd:PRK12647 371 PPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
1.95e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.35 E-value: 1.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 50 PRAVEAAIKYFLVQATASAMILFS----STINAWHTGQWDITQLTNPTSSTLMTT--------AIAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 118 VLQ-----GSPMITALMLST----MMKFPpITILFLTSHSLNPNLLVLmAISSAALGGWMGLNQTQVRKILGFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygLLRFS-LPLFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
....*.
gi 156523757 189 WMTIII 194
Cdd:PRK05846 315 FVTLGI 320
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-278 |
2.55e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.97 E-value: 2.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 107 GLVPFHFWFPEVLQGSPMITALMLSTM-MKFPPITILFLTSHSLNPNL-----LVLMAISSAALGGWMGLNQTQVRKILG 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 181 FSSISHLG--------WMTIIILYNPKLTLLTFY--LY-----TLMTTTVFLSLNT----TKSLKLSTTMTSWTKSPSLN 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYhllnhSLFKSVLFLGAGSvwfrTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|....*..
gi 156523757 242 AALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPA 278
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGA 391
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
2.83e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 45.88 E-value: 2.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 55 AAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTNPTSS-----TLMTTAIAMKLGLVPFHFWFPEVLQGSPM-ITAL 128
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSnVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 129 MLSTMMKFPPITILFLTSHSLNPNL-----LVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGwmtiIILYNPKLTLL 203
Cdd:PRK08667 243 MSGVMLKVAVYGLVRFLMDVLSPELwwgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG----IILMGIGLYVI 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 204 tFYLYTLMT-------TTVFLSLNTT--KSLKLSTT--------------MTSWTKS-PSLNAALMLTLLSLAGLPPLTG 259
Cdd:PRK08667 319 -FGVYGLDTlallalgGALFHSLNHAlfKSLLFLTAgsvvhatgtrniekMGGLVKLmPYTSALFLVGAVSIAALPPFNG 397
|
250
....*....|.
gi 156523757 260 FLPKWLIIQEL 270
Cdd:PRK08667 398 FASELLLYESF 408
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
6.34e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 6.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 29 AWtglEINTLAIIPLISKSHhPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTNPTS---STLMTTAIAM- 104
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVl 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 105 -------KLGLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPN-----LLVLMAISSAALGGWMGLNQ 172
Cdd:PRK12650 214 iavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 173 TQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYT----LMTTTVFLSL----NTTKSLKLSTTMTSWTKSPSLNAAL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 156523757 245 MLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-289 |
9.39e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 44.04 E-value: 9.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 10 LFSLLLGTTITISSNHWVMaWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVqATASAMILFSSTI----NAWHTGQWD 85
Cdd:PRK06589 123 NLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKI-LMISALLLFLPAViliyTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 86 ITQL--TNPTSST-LMTTAIAMKLGLVPFHFWFPEVLQGSPMITALMLSTMM----KFPPITIL-------FLTSHSLNP 151
Cdd:PRK06589 201 SGGLfsKNQSIILlLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILlyifglsYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 152 NLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGW--MTIIILYNPKLTLLTFYLYT--LMTTTVFLSLNTTKSLK- 226
Cdd:PRK06589 281 NWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 156523757 227 ---LSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMaPAATIIAMLSLLG 289
Cdd:PRK06589 361 edqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQ-PWLSIIVMLVVIA 425
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
1.64e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.42 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 97 LMTTAIAMKLGLVPFHFWFPEVLQGSPM-ITALMLSTMMKFPPITI-----LFLTSHSLNpNLLVLMAISSAALGGWMGL 170
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPDSYPTAPApVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGAI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 171 NQTQVRKILGFSSISHLGWMTI-IILYNPK-LTLLTFYL--YTLMTTTVFLSLNTTKSLKLSTTMTSW----TKSPSLNA 242
Cdd:PRK12665 293 AQSDIKRLLSFTLVSHIGYMVFgIALSTVAgLSGAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLgglaKASPLLAV 372
|
170 180
....*....|....*....|....*.
gi 156523757 243 ALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 373 LFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
2.26e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.65 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQLTNPTSST------LMTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLkylvflGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 107 GLVPFHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNP------NLLVLMAISSAALGGWMGLNQTQVRKILG 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 181 FSSISHLGWMTIIILY---NPKLTLL--TFYLYT---------LMTTTVFLSLNTTKSLKLSTTMtswTKSPSLNAALML 246
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 156523757 247 TLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-300 |
3.20e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 42.46 E-value: 3.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 21 ISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDITQ----LTNPTSST 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 97 LMTTAIA-------MKLGLVPFHFWFPEVLQGS---------PMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTasvilvylaGISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 161 SAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTLMTTTVFLSLnttkslkLSTTMTSWTKSPsL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFL-------IDAYNESYKREP-N 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 241 NAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLRLAYYS 300
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
3-296 |
3.26e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 42.45 E-value: 3.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 3 PHAKLVSLFSLL-LGTTITISSNHWVMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQATASAMILFSSTINAWHT 81
Cdd:PRK08377 106 PIDKYAMLFLLLmLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGAT 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 82 GQWDITQLT------NPTSS----TLMTTAIAMKLGLVPFHFWFPEVLQGSPM-ITALMLSTMMK---FPPITILFL--- 144
Cdd:PRK08377 186 GTLNMAHIAqlagtiDPTVAqvglALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLmqn 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 145 -TSHSLNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIIILYNPKL----TLLTFYLYTLMTTTVFLSL 219
Cdd:PRK08377 266 aNGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAV 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 220 N----TTKSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIAMLSLLGLFFYLR 295
Cdd:PRK08377 346 GyvgiTLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFR 425
|
.
gi 156523757 296 L 296
Cdd:PRK08377 426 L 426
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
3.50e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 42.24 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 56 AIKYFLVQATASAM------ILFS--STINAWHTGQwDITQLTNPTSSTLMTTAI------AMKLGLVPFHFWFPEVLQG 121
Cdd:PRK07691 160 SIKYVLINVVSSAFfvvavaILYSvvGTLNMADISV-KIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 122 SPM-ITALMLSTMMK------FPPITILFLTSHSLNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLGWMTIII 194
Cdd:PRK07691 239 PPIaIAALFGALLTKvgvyaiARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 195 LYNPKLTLLTFYLYT----LMTTTVFLSLNTTKSLKLSTT---MTSWTKS-PSLNAALMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07691 319 AMMTESGMIGAIYYLihdmIVKAALFLLIGIMIKITGTTDlkkMGGLIKRyPVLGWMFFIAALSLAGIPPLSGFYGKFFI 398
|
250 260 270
....*....|....*....|....*....|
gi 156523757 267 IQELTKQEMAPAATIIAMLSLLGLFFYLRL 296
Cdd:PRK07691 399 VEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
6.89e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.48 E-value: 6.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 111 FHFWFPEVLQGSPMITALMLSTMMKFPPITILFLTSHSLNPNLLVLMAIS-----SAALGGWMGLNQTQVRKILGFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 186 HLGWMTIIILYNPKLTLLTFYL--YTLMTTTVFLSL-----NTTKSLKLSTTMTSWTKSPSLNAALMLT-LLSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAgsvihSTTVDEQDMRKMGGLIHSIPFTYTMMLIgSFSIMGLPYL 403
|
170
....*....|.
gi 156523757 258 TGFLPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
1.59e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.13 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 82 GQWDITQLTNPTSSTLMTTAI---AM-KLGLVPFHFWFPEVLQGSPMITALMLST---------MMKFPPitilFLTSHS 148
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSStlvtagvflLIRFYP----FLSSTY 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 149 LNPNLLVLMAISSAALGGWMGLNQTQVRKILGFSSISHLG-WMTIIILYNPKLTLLTFYLYTLMTTTVFLSLNTT----- 222
Cdd:MTH00207 241 WFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshh 320
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 156523757 223 KSLKLSTTMTSWTKSPSLNAALMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 321 HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
34-270 |
1.73e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 40.26 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 34 EINTLAIIPLISKSH-HPRAVEAAIKYFLVQATASAMILFSSTINAWHTGQWDIT-----QLTNPTSSTLMTTAIA---M 104
Cdd:PRK06521 143 ETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAamraaHLSPFWASLVFLLALFgfgA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 105 KLGLVPFHFWFPEVLQGSPM-ITALMLSTMMK-----FPPITILFLTSHSLNPNLLVL-MAISSAALGGWMGLNQTQVRK 177
Cdd:PRK06521 223 KAGLVPLHVWLPRAHPAAPShVSALMSGVMLKvaiygILRVVFDLLGAPGWWWGVLVLaLGAISAVLGVLYALAEHDLKR 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 178 ILGFSSISHLGwmtiIILYNPKLTL--------------LTFYLYTLMTTTVFLSL-----------NTTKSLK----LS 228
Cdd:PRK06521 303 LLAYSTIENIG----IIFVGLGLAMvfiaygmpllaalaLTAALYHLLNHALFKSLlflgagavlhaTGTRDMEklggLI 378
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 156523757 229 TTMtSWTkspslnAALMLT-LLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06521 379 RRM-PWT------AWAFLIgCLAISALPPLNGFVSEWLLLQSL 414
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-324 |
3.15e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 35.31 E-value: 3.15e-03
10 20 30
....*....|....*....|....*....|....
gi 156523757 291 FFYLRLAYYSTITLPPNPTNHMKQWHINKTTNPM 324
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTL 34
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
7.03e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 7.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 101 AIAMKLGLVPFHFWFPEVLQGSPMITALMLSTM-----------MKFPpitILFLTSHSLNPNLLVlMAISSAALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIllklggyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156523757 170 LNQTQVRKILGFSSISHLGWMTIIILYNPKLTLLTFYLYTL----------MTTTVFLSLNTTKSLK----LSTTMTSWT 235
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgivssllfILVTILYDRHHTRLIKyyrgLSITMPIWG 394
|
170 180 190
....*....|....*....|....*....|..
gi 156523757 236 kspslnAALMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 395 ------TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| |
