|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
1.42e-97 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 283.21 E-value: 1.42e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDPSSSiFNLSLNWLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGaNGSTFLFVSLFSMI 80
Cdd:MTH00157 2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSFI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 81 LFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVR 160
Cdd:MTH00157 80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1559461005 161 LTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
4-224 |
1.18e-42 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 143.50 E-value: 1.18e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 4 LFSVFDPSS-SIFNLSLNWLSTFLGILMI----PSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGANgSTFLFVSLFS 78
Cdd:TIGR01131 1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 79 MILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLA 158
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1559461005 159 VRLTANMIAGHLLLTLLGNTGPSMSSI-LLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
66-221 |
6.49e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 116.34 E-value: 6.49e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 66 ANGSTFLFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCI 145
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1559461005 146 ETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSS 221
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
21-221 |
9.68e-20 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 83.69 E-value: 9.68e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 21 WLSTFLGILMIPSAYW----LMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLFVSLFSMILFNNFMGLF---PYIF 93
Cdd:pfam00119 5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 94 TSTSHLTLTLTLALPLWLCFMLFG-WINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLL 172
Cdd:pfam00119 85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1559461005 173 TLLGNTGPSMSSILLSVLIIT---QIALLVLESAVAMIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
62-219 |
4.05e-14 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 68.56 E-value: 4.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 62 GPMGANGSTF--LFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFG-WINNTQHMFAHLVPQGTPAvL 138
Cdd:COG0356 48 DTIGKKGRKFapLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-L 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 139 MPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIitQIALLVLESAVAMIQSYVFAVLSTL 218
Cdd:COG0356 127 APLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAV 204
|
.
gi 1559461005 219 Y 219
Cdd:COG0356 205 Y 205
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
1.42e-97 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 283.21 E-value: 1.42e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDPSSSiFNLSLNWLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGaNGSTFLFVSLFSMI 80
Cdd:MTH00157 2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKN-KGSTLIFISLFSFI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 81 LFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVR 160
Cdd:MTH00157 80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1559461005 161 LTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-223 |
8.94e-43 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 144.02 E-value: 8.94e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDPSSSIF--NLSLNWLSTFLGILMIPSAYWLMPSRYHIFWNnILLTLHKEFKTLLGPMGANGSTFLFVSLFS 78
Cdd:MTH00176 2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFML-MFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 79 MILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461005 159 VRLTANMIAGHLLLTLLGNTGPS---MSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSEV 223
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGllpVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
4-224 |
1.18e-42 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 143.50 E-value: 1.18e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 4 LFSVFDPSS-SIFNLSLNWLSTFLGILMI----PSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGANgSTFLFVSLFS 78
Cdd:TIGR01131 1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 79 MILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLA 158
Cdd:TIGR01131 80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1559461005 159 VRLTANMIAGHLLLTLLGNTGPSMSSI-LLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSaIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
66-221 |
6.49e-33 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 116.34 E-value: 6.49e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 66 ANGSTFLFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCI 145
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1559461005 146 ETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSS 221
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
6.36e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 115.99 E-value: 6.36e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDPSSSIFNLSLN----WLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMgANGSTFLFVSL 76
Cdd:MTH00005 2 LTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 77 FSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGT 156
Cdd:MTH00005 81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1559461005 157 LAVRLTANMIAGHLLLTLLGNTGPSM---SSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
4.63e-30 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 111.11 E-value: 4.63e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDPSSSIFNL--SLNWLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGpMGANGSTFLFVSLFS 78
Cdd:MTH00173 2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 79 MILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00173 81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1559461005 159 VRLTANMIAGHLLLTLLGNT-----GPSMSSILLSVLIItQIALLVLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00173 161 VRLLANISAGHIVLTLIGNYlssslFSSSVVSLLLVLLI-QVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
7.32e-29 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 108.11 E-value: 7.32e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDpSSSIFNLSLNWLSTFLGILMIPSAYWLMP-SRYHIFWNNILLTLHKEFKTLLGPMGANGStFLFVSLFSM 79
Cdd:MTH00179 2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTNRWLnNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 80 ILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAV 159
Cdd:MTH00179 80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1559461005 160 RLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQ---IALLVLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00179 160 RLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
3-219 |
5.31e-26 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 100.41 E-value: 5.31e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 3 NLFSVFDpSSSIFNLSLNWLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLfVSLFSMILF 82
Cdd:MTH00101 4 NLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLML-MSLILFIGS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 83 NNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLT 162
Cdd:MTH00101 82 TNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLT 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 163 ANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALL---VLESAVAMIQSYVFAVLSTLY 219
Cdd:MTH00101 162 ANITAGHLLIHLIGGATLALMSISTTTALITFIILIlltILEFAVALIQAYVFTLLVSLY 221
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
24-222 |
3.31e-25 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 98.41 E-value: 3.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 24 TFLGILMIPSAY---WLM-PSRYHIFWNNILLTLHKEF-----KTLLGPMGANGSTF--LFVSLFSMILFNNFMGLFPYI 92
Cdd:MTH00132 13 TYLGIPLIALALtlpWILfPTPTSRWLNNRLLTLQGWFinrftQQLLLPLNVGGHKWalLLTSLMLFLITLNMLGLLPYT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 93 FTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLL 172
Cdd:MTH00132 93 FTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLI 172
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1559461005 173 TLLGNTGPSMSSILLSVLIITQIALL---VLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00132 173 QLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
5.50e-25 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 97.59 E-value: 5.50e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFDpSSSIFNLSLNWLSTFLGILMIPSA-YWLMPSRYHIFwnnILLTLHKEFKTLLGPMGANGS--TFLFVSLF 77
Cdd:MTH00120 2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSPkNRLLTNRLTTL---QLWLIKLITKQLMLPLNKKGHkwALILTSLM 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 78 SMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTL 157
Cdd:MTH00120 78 LLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLAL 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461005 158 AVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALL---VLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00120 158 GVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
2-222 |
5.76e-25 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 97.74 E-value: 5.76e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 2 TNLFSVFDPSSsIFNLSLNWLSTFLGI---LMIPSAYWLmPSRYHIFWNNILLTLhkeFKTLLGPMGANGSTF--LFVSL 76
Cdd:MTH00035 5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWagLLTTV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 77 FSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGT 156
Cdd:MTH00035 80 FILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIA 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461005 157 LAVRLTANMIAGHLLLTLLGNT--GPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00035 160 LGLRLAANLTAGHLLIFLLSTAiwELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-222 |
2.37e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 96.19 E-value: 2.37e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 1 MTNLFSVFdPSSSIFNLSLNWLSTFLGILMIPSA--YWLmpsryhifwNNILLTLHKEF-----KTLLGPMGANGS--TF 71
Cdd:MTH00073 2 NLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTPtnKWL---------NNRLSTLQIWFlqnftKQLMLPLNTPGHkwAL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 72 LFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNV 151
Cdd:MTH00073 72 ILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1559461005 152 IRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIALL---VLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00073 152 IRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
21-221 |
9.68e-20 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 83.69 E-value: 9.68e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 21 WLSTFLGILMIPSAYW----LMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLFVSLFSMILFNNFMGLF---PYIF 93
Cdd:pfam00119 5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 94 TSTSHLTLTLTLALPLWLCFMLFG-WINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLL 172
Cdd:pfam00119 85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1559461005 173 TLLGNTGPSMSSILLSVLIIT---QIALLVLESAVAMIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
14-219 |
7.67e-19 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 81.63 E-value: 7.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 14 IFNLSLNWLSTFLGILMIPSAYWLMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLFvSLFSMILFNNFMGLFPYIF 93
Cdd:MTH00172 17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFII-SLFFFIVFLNLLGLFPYVF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 94 TSTSHLTLTLTLALPLWLCFMLFGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLT 173
Cdd:MTH00172 96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1559461005 174 LLGNTGPSM--SSILLSVL-IITQIALLVLESAVAMIQSYVFAVLSTLY 219
Cdd:MTH00172 176 ILAGFGFNMlcASGFLSLFpLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
36-219 |
1.38e-16 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 75.81 E-value: 1.38e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 36 WLMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLFvSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFML 115
Cdd:MTH00175 50 KLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 116 FGWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSS----ILLSVLI 191
Cdd:MTH00175 129 LGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSngliILSLFPM 208
|
170 180
....*....|....*....|....*...
gi 1559461005 192 ITQIALLVLESAVAMIQSYVFAVLSTLY 219
Cdd:MTH00175 209 LIMIFITLLEMAVAVIQAYVFCLLTTIY 236
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
62-219 |
4.05e-14 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 68.56 E-value: 4.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 62 GPMGANGSTF--LFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFG-WINNTQHMFAHLVPQGTPAvL 138
Cdd:COG0356 48 DTIGKKGRKFapLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-L 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 139 MPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIitQIALLVLESAVAMIQSYVFAVLSTL 218
Cdd:COG0356 127 APLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAV 204
|
.
gi 1559461005 219 Y 219
Cdd:COG0356 205 Y 205
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
37-219 |
2.25e-13 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 67.27 E-value: 2.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 37 LMPSRYHIFWNNILLTLHKEFKTLLGPMGANGSTFLfVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLF 116
Cdd:MTH00174 59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 117 GWINNTQHMFAHLVPQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSSILLSVLIITQIA 196
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217
|
170 180
....*....|....*....|....*..
gi 1559461005 197 LL----VLESAVAMIQSYVFAVLSTLY 219
Cdd:MTH00174 218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
72-219 |
3.36e-09 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 54.80 E-value: 3.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 72 LFVSLFSMILFNNFMGLFP-YIFTSTSHLTLTLTLALPLWLCFMLFG-WINNTQHMFAHLVPQgtpavLMPFMVCIETIS 149
Cdd:PRK05815 75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 150 NVIRPGTLAVRLTANMIAGHLLLTLLGnTGPSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLY 219
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
127-219 |
1.30e-06 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 47.96 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 127 AHLVPQGTPAVLMPFMVCIETI-SNVIRPGTLAVRLTANMIAGHLLLT-LLGNTGPSMSSILLSVLIITQIALLVLESAV 204
Cdd:PRK13417 250 WHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFV 329
|
90
....*....|....*
gi 1559461005 205 AMIQSYVFAVLSTLY 219
Cdd:PRK13417 330 AFLQAYIFVLLTSLF 344
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
126-219 |
1.48e-05 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 45.12 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 126 FAHLVpQGTPAVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLLtllgntgpsMSSILLSVLIITQIALLV------ 199
Cdd:PRK13419 228 LAHLT-GGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVAVAvsvpfa 297
|
90 100
....*....|....*....|....*
gi 1559461005 200 -----LESAVAMIQSYVFAVLSTLY 219
Cdd:PRK13419 298 ifiylLELFVAFLQAYIFTMLSALF 322
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
69-222 |
9.66e-04 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 38.81 E-value: 9.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461005 69 STFLFVSLFSMILFNNFMGLFPYIFTSTSHLTLTLTLALPLWLCFMLFGWINNTQhmFAHLVPQGTPAVLMPF-MVCIET 147
Cdd:MTH00087 51 SSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEI 128
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1559461005 148 ISNVIRPGTLAVRLTANMIAGHLLLtllgntgpSMSSILLSVLIITQIALLVLESAVAMIQSYVFAVLSTLYSSE 222
Cdd:MTH00087 129 VSELSRPLALTLRLTVNLMVGHLIS--------SLLNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
|