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Conserved domains on  [gi|1559461003|gb|QAB06064|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Peckia australis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 3.23e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 3.23e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   4 ILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIKF 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1559461003  84 SNLFMWTTTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 3.23e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 3.23e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   4 ILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIKF 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1559461003  84 SNLFMWTTTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-76 5.50e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 72.46  E-value: 5.50e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461003  19 MLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILP 76
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-76 2.74e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 71.31  E-value: 2.74e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1559461003   2 LSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILP 76
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-115 3.23e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 3.23e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   4 ILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIKF 83
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1559461003  84 SNLFMWTTTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.13e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 116.88  E-value: 3.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 4.56e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 108.93  E-value: 4.56e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 4.67e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 98.78  E-value: 4.67e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYHEWNQGMLNWS 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 4.49e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 86.13  E-value: 4.49e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1559461003  81 IKFSN---LFMWTTTsiiFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00136   80 DQLPSpllTFFWATA---VLILLTLGLIYEWLQGGLEW 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 4.54e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 86.19  E-value: 4.54e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTLvDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYHEWNQGMLNWSN 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-115 5.61e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 85.70  E-value: 5.61e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIIlliSMVVMLLASILSKkTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00113    3 LISMLTISLAL---STILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00113   79 INLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 3.68e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 83.84  E-value: 3.68e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003  34 EKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIKFSNLFMWTTTSIIFILILLIGLYHEWNQGML 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 1559461003 114 NWS 116
Cdd:MTH00106  112 EWT 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-115 9.02e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 79.94  E-value: 9.02e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   5 LTMSLIILLISMVVMLLASILSK--KTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIIciik 82
Cdd:MTH00203    2 NLIMLFFLIALLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLP---- 77

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  83 FSNLFMWTTT--SIIFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00203   78 WSNQLSSLSLllAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-115 2.19e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 79.27  E-value: 2.19e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   4 ILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPI---ICI 80
Cdd:MTH00069    2 IMLMLLISTILSLILITISFWLPLNN-PDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQL 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  81 IKFSNLFMWTTTsiiFILILLIGLYHEWNQGMLNW 115
Cdd:MTH00069   81 NTPTNTLFWSTL---ILILLTLGLIYEWIQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-76 5.50e-18

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 72.46  E-value: 5.50e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461003  19 MLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILP 76
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-76 2.74e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 71.31  E-value: 2.74e-17
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1559461003   2 LSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILP 76
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 1-115 4.22e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 65.89  E-value: 4.22e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICI 80
Cdd:MTH00055    5 FLGIFILLLFSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVV 83

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  81 IKFSNLFMWTTTSIIFILILLIGLYhEWNQGMLNW 115
Cdd:MTH00055   84 YNQIGLFGFWVMYLFLIILTIGLIY-EWVKGGLEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 2-76 2.13e-14

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 64.11  E-value: 2.13e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1559461003   2 LSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILP 76
Cdd:PRK06602    9 LPFLIFLIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFP 82
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 7-115 1.30e-13

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 62.00  E-value: 1.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   7 MSLIILLISMVVM----LLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIK 82
Cdd:MTH00018    1 YGLFILLIFSVVLsalfSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1559461003  83 FSNLFMWTTTSIIFILILLIGLYhEWNQGMLNW 115
Cdd:MTH00018   81 QIAPFGFWTMVGFLFILTLGLIY-EWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 3.47e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 58.41  E-value: 3.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   3 SILTMSLIILLISMVVMLLASILSKkTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPIICIIK 82
Cdd:MTH00030   12 TLLGVGIILLLVSISFTLGNSRIGL-TKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFN 90

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1559461003  83 FSNLFMWTTTSIIFILILLIGLYhEWNQGMLNW 115
Cdd:MTH00030   91 QLNLFSFWIVYTFLIVLAIGLAY-EWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 4-115 2.20e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 40.43  E-value: 2.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   4 ILTMSLIILLISMVVMLLASILSKKTLvDREKSSPFECGFDPKSSSRLP--FSLRFFLITIIFLIFDVEIALILPiiCII 81
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVGPKRY-NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAV 83

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1559461003  82 KFSNLFMWTTTSIIFILILLIGLY-HEWNQGMLNW 115
Cdd:PRK07928   84 SFDALGVFGLVEMALFMLTVFVAYaYVWRRGGLEW 118
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-75 2.54e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.27  E-value: 2.54e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASIL--SKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALIL 75
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIYFFHSGLwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-76 6.58e-04

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 36.64  E-value: 6.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   1 MLSILTMSLIILLISM-------VVMLLASILSKKTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIAL 73
Cdd:PRK07756    1 MASVYENSYMIVLIFLllgillpVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLF 80


                  ...
gi 1559461003  74 ILP 76
Cdd:PRK07756   81 LYP 83
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-78 1.27e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 35.64  E-value: 1.27e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1559461003   1 MLSILTMSLIILLISMVVMLLASILSKKTlVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPII 78
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLL 77
ndhC CHL00022
NADH dehydrogenase subunit 3
 9-116 1.67e-03

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 35.35  E-value: 1.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003   9 LIILLISMVVMLLASILSK---KTLVDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPiiCIIKFSN 85
Cdd:CHL00022   11 WAFLIISSLIPILAFLISGllaPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSFDV 88

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1559461003  86 LFMWT-TTSIIFILILLIGLYHEWNQGMLNWS 116
Cdd:CHL00022   89 LGVSAfIEALIFVLILIVGLVYAWRKGALEWS 120
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
10-87 8.34e-03

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 33.87  E-value: 8.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1559461003  10 IILLISMVVML----LASILSKK-TLVDRE--KSSPFECGFDP-KSSSRLpfSLRFFLITIIFLIFDVEIALILPIICII 81
Cdd:PRK08489   15 VLLVLTFVAFFlttrLARFISRKlAQKNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDF 92


                  ....*.
gi 1559461003  82 KFSNLF 87
Cdd:PRK08489   93 KLLGLF 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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