|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.20e-148 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 422.31 E-value: 1.20e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 154371643 321 TNTLVSTLTSLSISLLPLSPMIFTTT 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
4.47e-122 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 354.88 E-value: 4.47e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSlNPTLLTTMAIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
....
gi 154371643 321 TNTL 324
Cdd:MTH00135 320 QLTL 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
4.95e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 352.30 E-value: 4.95e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*
gi 154371643 321 TNTLV 325
Cdd:MTH00070 321 TNNLL 325
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-324 |
1.52e-108 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 320.64 E-value: 1.52e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITL-PPNPSSKMK-QWSTK 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMfPSTNNMKMKwQFENT 320
|
....*.
gi 154371643 319 NPTNTL 324
Cdd:MTH00105 321 KPMTLL 326
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
2.49e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 276.85 E-value: 2.49e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*
gi 154371643 321 TNTLV 325
Cdd:MTH00200 321 SNLLV 325
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-324 |
6.77e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 6.77e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 11 LSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 91 HPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIMSIALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 171 NQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 154371643 251 LAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTKNPTNTL 324
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVY 324
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-313 |
5.41e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.12 E-value: 5.41e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLthppacLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPtalLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00160 82 LMLFNNISS------MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-318 |
2.23e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 170.84 E-value: 2.23e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWH 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITllthppacLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALL-LITSHSLNPTLLTTMAI 159
Cdd:MTH00144 81 SFSWFSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 160 MSIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTlMTTWTKAPM 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYK 231
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 154371643 240 LNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMKQWSTK 318
Cdd:MTH00144 232 TGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNS 310
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
2.82e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 157.63 E-value: 2.82e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 1 MTPIAKLMSTlSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSminawh 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 81 TGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTTMAIM 160
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 161 SIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 241 NTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYcSTITLPPNPSS 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-313 |
1.77e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.13 E-value: 1.77e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 11 LSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHtgqwditLLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSN-------LYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 91 HPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPtaLLLITSHSLNPTLLTTMAIMSIALGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 171 NQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTLMTTSIFLTMNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 154371643 251 LAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYCSTITLPPNPSSKMK 313
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-298 |
1.03e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 124.07 E-value: 1.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 10 TLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMIS-KSHHPRAVEAATKYFLVQAAASTLVLF-SSMI----------- 76
Cdd:COG1007 108 LLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLygatgslnlag 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 77 --NAWHTGQWDITLLThpPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLL----ITSHSLN 150
Cdd:COG1007 188 iaAALAAGGANSPLLL--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllvEAFPGLA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 151 P---TLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM-TSIITYDPK-LTLLTFY--IYTLMTTSIFLTM---- 219
Cdd:COG1007 266 AdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYllAYLFMNLGAFAVIllls 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 220 -NTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAY 298
Cdd:COG1007 346 rKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
2.92e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 110.12 E-value: 2.92e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 13 ILLGTTMTITSSHWAMAWAGLEINTLSIIPMI-SKSHHPRAVEAATKYFLVQAAASTLVLFS-------------SMINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 79 WHTGQWDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLitSHSLNPTLLTTMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 159 IMSIALGGWMGLNQTQTRK*LAFSSISHLGW------MTSIITYDPKLTLLTFYIYT-LMTTSIFLTMNTTNTLkLSTLM 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFvlwgieIGSFESIQASLVYLFIYIIMsICVFSIILALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 154371643 232 TTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.42e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.83 E-value: 1.42e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 14 LLGTTMTITSSHWAMAWAGLEINTLSIIPMIS-KSHHPRAVEAATKYFLVQAAASTLVL--------------FSSMINA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 79 WHTGQWDITLLTHppACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLL----ITSHSLNPT-- 152
Cdd:PRK05777 193 LADGSGNSLLLLF--GLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 153 -LLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM---TSIITYDPKLTLLtFY--IYTLMTTSIF--LTMNTTNT 224
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEGYSAVL-FYllAYLFMTLGAFgvISLLRRKG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 154371643 225 LKLSTLmTTWT----KAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:PRK05777 350 GEAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-271 |
1.88e-23 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 98.15 E-value: 1.88e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 23 SSHWAMAWAGLEINTLSIIPMI-SKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLL--THPPAC---- 95
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 96 -----LLLTTAIAIKLGLTPFHFWLPEVLQGSSLP-TALLLSTVMKLPPTALLLITS--HSLNPT---LLTTMAIMSIAL 164
Cdd:pfam00361 81 llllfLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 165 GGWMGLNQTQTRK*LAFSSISHLGWMTSII----TYDPKLTLLTFYIYTLMTTSIFL--------TMNTTNTLKLSTLmt 232
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsviyrRVHTRNIRDYGGL-- 238
|
250 260 270
....*....|....*....|....*....|....*....
gi 154371643 233 tWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELV 271
Cdd:pfam00361 239 -AKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
11-297 |
7.47e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 98.87 E-value: 7.47e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 11 LSILLGTTMTITSSHWAMAWAGLEINTLSI-IPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLL 89
Cdd:TIGR01770 109 LFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 90 TH--------PPAC----LLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLL-------ITSHSLN 150
Cdd:TIGR01770 189 LLflsngmlnISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 151 PTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM---TSIITYDPKLTLLTF-YIYTLMTTSIFLTM------N 220
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYIligLLAGTLEGIKAVLFYiFIYALMSLGAFGVLsllrsyK 348
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 154371643 221 TTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLA 297
Cdd:TIGR01770 349 DEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
1.35e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 98.17 E-value: 1.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 11 LSILLGTTMTITSSHWAMAWAGLEINTLSIIPMIS-KSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 87 -TLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTtmAIMSIALG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 166 GWMGLNQTQTRK*LAFSSISHLG---WMTSIITYDP-KLTLLTFYIYTLMTT---SIFLTMNTTNTLkLSTLMTTWTKAP 238
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSIcsfSIILSLKLTKGL-IVEVSGLSRKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 154371643 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-296 |
2.96e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 90.98 E-value: 2.96e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 14 LLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLLTH-- 91
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 92 --------PPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVM-KLPPTALLLITSHSLNP-------TLLT 155
Cdd:COG0651 197 aeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILRVLTLLFGAdpalflgTLLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 156 TMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIY----TLMTTSIFLT----MNTTNTLKL 227
Cdd:COG0651 277 VLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRDL 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 154371643 228 STLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:COG0651 357 DKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
6.69e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 90.69 E-value: 6.69e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 3 PIAKLMSTLSILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAV---------EAATKYFLVQAAASTLVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 74 SMINAWHTGQ--------------WDITLLTHPPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLppT 139
Cdd:MTH00198 267 CALYFGFTGNegmlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 140 ALLLITSHSLNPTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM---TSIITYDPKLTLLTFYIYTLMTTSIF 216
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligVSAGTYESLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 217 LTM----------------------NTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQE 274
Cdd:MTH00198 425 FTVictleefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 154371643 275 MTTTTTIISLMSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
3.08e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 76.46 E-value: 3.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 33 LEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLLTH--PPACLLLT------TAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalAENPTVVTafgfvlLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 105 KLGLTPFHFWLPEVLQGSSLPTALLLS-TVMKLPPTALLLITSHSLNP---------TLLTTMAIMSIALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 175 TRK*LAFSSISHLGWM---TSIITYDpKLTLLTFYI--YTLMTTSIFLT----MNTTNTLKLSTLMTTWTKAPMLNTTLM 245
Cdd:PRK08375 295 VKRVLAYSTVSQMGYIllgLALLTPL-ALAAGLLHLlhHALMKGALFLAagaiEVTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 154371643 246 LTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAY 298
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
4.38e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 70.03 E-value: 4.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 51 RAVEAATKYFLVQAAASTLVL--FSSM--INAWHTGQWDI------TLLTHPPACLL----LTTAIAIKLGLTPFHFWLP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 117 EVLQGSSLPTALLLSTVMKLPPTALL-----LITSHSLNP--TLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALAtrifdIPFYFSSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 190 -MTSIITYDPK------LTLLTFYIYTLMTT--SIFLTMNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGF 260
Cdd:CHL00049 319 vIIGIIVGDSNdgyasmITYMLFYIFMNLGTfaCIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270
....*....|....*....|....*....|....*.
gi 154371643 261 LPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-191 |
8.37e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.95 E-value: 8.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 38 LSIIPM---ISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQW--DITLLTHPP--------ACLLLTTAIAI 104
Cdd:COG1008 142 LMLIPMyflIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPlpltaqllLFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 105 KLGLTPFHFWLPEVLQGSSLPTALLLSTVM-KLPPTALLLI-------TSHSLNPTLLTtMAIMSIALGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGGYGLLRFalplfpeASAYFAPLLAA-LGVIGIIYGALVALAQTDLK 300
|
170
....*....|....*
gi 154371643 177 K*LAFSSISHLGWMT 191
Cdd:COG1008 301 RLIAYSSVSHMGFVL 315
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.42e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 68.54 E-value: 1.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 50 PRAVEAATKYFLVQAAASTLVLF-SSMINAWHTGQWDIT-----LLTHPPACLLLT-----TAIAIKLGLTPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSaialaLITSPSLGLALAlvfviAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 119 LQGSSLPTALLLSTVMKLPPTAL---LLITSHSLNPT----LLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGW-M 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 191 TSIIT-YDPKLTLLTFY--IYTLMT----TSIFLTMNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 317 IGLVAgTEAGYASMVFYllAYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-298 |
5.46e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 60.37 E-value: 5.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 48 HHPRAVEAATKYFLVQAAASTLVLFS--SMINAWHT-GQWDITLLTHPP------------------ACLLLTTAIAIKL 106
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLAlaFLYATFGTlNMADLSAKIRGLsfpltgglagnpplalgvALALALWAFTIKA 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 107 GLTPFHFWLPEVLQGSSLPTALLLSTVM-KLPPTALLLI------TSHSLNPTLLTTMAIM------SIALGGWMGLNQT 173
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVvNVGAYAIIRFlytifgISPSLIDFRAALSPILiilgavSAIIGALMMVVQK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 174 QTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTL----------MTTSIFL-TMNTTNTLKLSTLMttwTKAPMLNT 242
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVFIhAAGTRDIDELAGLG---RKMPIASF 394
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 154371643 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAY 298
Cdd:PRK12667 395 AFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.56e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.96 E-value: 1.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 33 LEINTLSIIPMIS-KSHHPRAVEAATKYFLVQAAASTLVLFSSMI-----NAWHTGQWDITLLTHPP-----ACLLLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLNMAYLAVKMSENPTvvakiALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 102 IAIKLGLTPFHFWLPEVLQG--SSLPTALLLSTVMKLPPTALLLITSHSLNPTLLTT------MAIMSIALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 174 QTRK*LAFSSISHLGWM-----TSIITY-DPKLTLL--------TFYI--YTLMTTSIFLT----MNTTNTLKLSTLMTT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgVGLAALgDPAMASYgeialaggIYHIvnHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 154371643 234 WTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
1.68e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 34 EINTLS---IIPMISKshhpRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDIT-----LLTHPP------ACLLLT 99
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgLINDTStgfaliVFLFLL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 100 TAIAIKLGLTPFHFWLPE-----------VLQG--SSLPTALLLSTVMKLPPTALLL----ITSHSLNPTLLTTMAIMSI 162
Cdd:PRK08668 204 AFGVAKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFSefgtYRGVPLFNYILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 163 ALGGWMGLNQTQTRK*LAFSSISHLGW-MTSIITYDP-KLTLLTFYIYT--LMTTSIFLTMNT----TNTLKLSTLMTTW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSlGFAGGLFHVFNhaLFKGLFFLIFAAviyrTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 154371643 235 TKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAY 298
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-191 |
2.45e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.41 E-value: 2.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 50 PRAVEAATKYFLVQAAASTLVLFSSMINAW-HTGQWDITLLTHPPACLLLTT--------AIAIKLGLTPFHFWLPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFlGGGTFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 154371643 121 GSSLPTALLLS-TVMKLPPTALLLI-------TSHSLNPtLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWMT 191
Cdd:TIGR01972 232 EAPTAGSVILAgVLLKMGTYGFLRFnlplfpdASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-191 |
9.24e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.48 E-value: 9.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 18 TM--TITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYF---------------LVQAAASTLVLFSSMINAW- 79
Cdd:PRK06458 120 TMllALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEMAILWt 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 80 ----HTGQWDITLLTHPPACLLLttAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVmkLPPTALL------LITSHSL 149
Cdd:PRK06458 200 ellkHASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGV--LLNVALYavlryyILIDAAI 275
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 154371643 150 NP----TLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWMT 191
Cdd:PRK06458 276 GSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-271 |
1.11e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 56.31 E-value: 1.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 48 HHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDIT-LLTHPPACL--LLTTAIAI--------KLGLTPFHFWLP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSeLLAAAPTILssPLLTLILLllllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 117 EVLQGsslPT---ALLLSTVMKlppTA--LLLITSH---SLNPTLLTTMAIMSIA---LGGWMGLNQTQTRK*LAFSSIS 185
Cdd:COG1009 236 DAMEG---PTpvsALLHAATMV---KAgvYLLARLSplfALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 186 HLGWMTSIITydpkLTLLTFYIYTLMTTSIF------------LTMNTTNTLKLSTLmttWTKAPMLNTTLMLTLLSLAG 253
Cdd:COG1009 310 QLGYMFLALG----VGAYVAALFHLLTHAFFkallflgagsviHATGTRDIRKMGGL---RKKMPITAITFLIGALSLAG 382
|
250
....*....|....*...
gi 154371643 254 LPPLTGFLPKWLIIQELV 271
Cdd:COG1009 383 IPPFAGFFSKEAILEAAL 400
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
6.13e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 53.88 E-value: 6.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 55 AATKYFLVQAAASTLVLFSSMINAWHTGQ--WDITLLT--HPPACLLLT------TAIAIKLGLTPFHFWLPEVLQGSSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGakSYPLALELLlyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 154371643 125 PTALLLSTVM-KLPPTAL------LLITSHSLNPTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLG 188
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
38-191 |
6.93e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.67 E-value: 6.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 38 LSIIPM---ISKSHHPRAVEAATKYFLVQAAASTLVLFSSM----INAWHTGQWDITLLTHPPACLLLTT--------AI 102
Cdd:PRK05846 142 AMLIPMyflIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYwlflaffiAF 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 103 AIKLGLTPFHFWLPEVLQGSSLPTALLLSTVM-KLPPTALLLI-------TSHSLNPtLLTTMAIMSIALGGWMGLNQTQ 174
Cdd:PRK05846 222 AVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILlKMGAYGLLRFslplfpdASHEFAP-IIITLGVIAIIYGALVALAQTD 300
|
170
....*....|....*..
gi 154371643 175 TRK*LAFSSISHLGWMT 191
Cdd:PRK05846 301 IKKLIAYSSISHMGFVT 317
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
2.04e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 80 HTGQWDIT-LLTHPPACLLLTTAIAI-------KLGLTPFHFWLPEVLQGSSLPTALLLSTVM---------KLPPTall 142
Cdd:PRK12644 183 AAGTYRLSeLLADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 143 LITSHSLNPTLLTtMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWMTSII---TYDPKLTLLTFYI-YTLMTTSIFLT 218
Cdd:PRK12644 260 FADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLV 338
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 154371643 219 M----NTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
5.35e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.58 E-value: 5.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 98 LTTAIAIKLGLT--------PFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITS--HSLNPT---LLTTMAIMSIAL 164
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSpvFHDVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 165 GGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYT----LMTTSIFLTM----NTTNTLKLSTLMTTWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180
....*....|....*....|....*..
gi 154371643 237 APMLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
1.29e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.75 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 13 ILLGTTMTITSSHWAMAWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAA------STLVLFSSMINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 87 T-LLTHPP---------ACLLLTTAIAIKLGLTPFHFWLPEV-LQGSSLPTALLLSTVMKLPPTALLLITS-------HS 148
Cdd:PRK08676 191 TeLAAHASllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 154371643 149 LNPTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIYTL 210
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
2.52e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.93 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 55 AATKYFLVQAAASTLVLFSSMINAWHTGQWDI---TLLTH--PPACLLLTTA-----IAIKLGLTPFHFWLPEVLQGSSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHtlPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 154371643 125 PTALLLSTV-MKLPPTALL------LITSHSLNPTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVlLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
5.01e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 48.29 E-value: 5.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 48 HHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLLTHPPAC--------LLLTTAIAIKLGLT------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELienikghpLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 114 WLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPT-----LLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 189 WMTSIITY----DPKLTLL--TFYI--YTLMTTSIFLTM----NTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYttyhEPGLGVAaaTFHLlnHATFKACLFLVAgivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 154371643 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-189 |
1.19e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 46.87 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 33 LEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDIT-LLTHPPACL-LLTTAIAIKLGLTP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSgLATADPEAFaLIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 111 FHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPT--LLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
.
gi 154371643 189 W 189
Cdd:PRK07234 283 F 283
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
93-294 |
1.31e-05 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 47.15 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 93 PACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPT-----LLTTMAIMSIALGGW 167
Cdd:TIGR00940 207 TAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTeawfwIVGLAGLITLLWGSY 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 168 MGLNQTQTRK*LAFSSISHLGWMTSI-----ITYDPKLTLLTFYIyTLMTTSIFLTMNTTnTLKLSTLMTT--------- 233
Cdd:TIGR00940 287 FAIFQQDLKGILAFSTISQLGLIMVLlglgsPSYHYQGDDSKIYA-LAAVAAVFHLINHA-TFKGSLFMAAgiidhetgt 364
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 234 ---------WTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKqemTTTTTIISLMSLLGLFFYL 294
Cdd:TIGR00940 365 rdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAIT---AHLVNPFDTVTLGYLFPYV 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
1.94e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 46.26 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 59 YFLVQAAASTLVLFSSMINAW-HTGQWDITLLTHPPAC-----LLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 133 VM-KLPPTALLLITSHSLNP-----TLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLG--------WMTSIITYDP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 199 KLTLLTF-------YIYTLMTTSIFLT----MNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*
gi 154371643 268 QELVKQEMTTTTTI-ISLMSLLGLF 291
Cdd:PRK08667 406 ESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
92-266 |
2.93e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 2.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 92 PPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPT-----LLTTMAIMSIALGG 166
Cdd:PRK12647 195 LAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 167 WMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTFYIY----TLMTTSIFLTMNT----TNTLKLSTLMTTWTKAP 238
Cdd:PRK12647 275 LLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMP 354
|
170 180
....*....|....*....|....*...
gi 154371643 239 MLNTTLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12647 355 ITAAAALLAALSMAGLPPLFGFLAKELI 382
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
5.98e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.82 E-value: 5.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 96 LLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTV-MKLPPTALLLITSHSLNPTL-----LTTMAIMSIALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 170 LNQTQTRK*LAFSSISHLG--------WMTSIITYDPKLTLLTFY--IYTLMTTSIFLTM---------NTTNTLKLSTL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKSVlflgagsvwFRTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 154371643 231 MTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
8.86e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.19 E-value: 8.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 96 LLLTTAIAIKLGLTPFHFWLPEvlqgsSLPTALLLST-----------VMKLPPTALLLITSHSLNpTLLTTMAIMSIAL 164
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPD-----SYPTAPAPVTavfaglltkvgVYAIIRTHTLLFPGGGLD-TLLMVVALLTMVV 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 165 GGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTL--LTFYI--YTLMTTSIFLTMN-------TTNTLKLSTLMTT 233
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGlierqagSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|....*
gi 154371643 234 wtkAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 367 ---SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
9.29e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 43.95 E-value: 9.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 33 LEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQW---DITLLTHP--------PACLLLTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLnmgDMFLIIQDlptnraiqIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 102 IAIKLGLTPFHFWLPEVLQGSSLPTALLLS-TVMKLPP-----------TALLLITSHSLNpTLLTTMAIMSIALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIyliirivydvfKANFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 170 LNQTQTRK*LAFSSISHLGW---MTSIITYDPKLTLLTFYI-YTLMTTSIFLTMNTT----NTLKLSTLMTTWTKAPMLN 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYiilAVSLNTYYGLAAAVAYIVnHSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 154371643 242 TTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRL 296
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-308 |
9.49e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 9.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 34 EINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDIT-----LLTHPP------ACLLLTTAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITdihnaLLVNPTspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 103 AIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLIT-----SHSLNPTLLTTMAIMSIA---LGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgGLSYFPSAQGVLIALSVLamvFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 175 TRK*LAFSSISHLGWMTSIITYDPKLTL-------LTFYIYT----LMTTSIFLTMNTTNTLKLSTLMTTwtkAPMLNTT 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIYKsalfLGAGIVSYRTKTSNLRKLGGLLPV---MPVVAFM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 154371643 244 LMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISLMSLLGLFFYLRLAYcsTITLPPNP 308
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
4-190 |
1.74e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 43.15 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 4 IAKLMSTLSillGTTMTITSSHWAM---AWAGLEI---NTLSIIPmisksHHPRAVEAATKYFLVQAAASTLVLFSSMIN 77
Cdd:PRK08168 103 VRALAGVLA---AVHLLVLSDHLLVliaAWAAISLalhRLLCFYP-----DRPFARLAAHKKFIADRLAELLLLAAAALA 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 78 AWHTGQWDITLL--------THPP---ACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTV-----MKLPPTAL 141
Cdd:PRK08168 175 YLEVGSLSLSALwahlaaqgASPSlqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggFVLIRFAP 254
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 154371643 142 LLITSHSLNpTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGWM 190
Cdd:PRK08168 255 LLEQAPPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-284 |
2.63e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.50 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 11 LSILLGTTMTITSSHWAMaWAGLEINTLSIIPMISKSHHPRAVEAATKYFLVQAAASTLVLFSSMI---NAWHTGQW-DI 86
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 87 TLLTHPPACLLLTTAIA--IKLGLTPFHFWLPEVLQGSSlPTALLLSTVM-----KLPPTALLLITSHSLNPTLLTTM-- 157
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYgiAKTAIFPVHSWLPAAMVAHY-PVSALLHAVIvvktgLFCIYKILLYIFGLSYLQRIFAEfn 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 158 -----AIMSIALGGWMGLNQTQTRK*LAFSSISHLGW--MTSIITYDPKLTLLTFYIYTLMTTSI--FLTMNTTNTLK-- 226
Cdd:PRK06589 282 wlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVSHSFAKIclFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 227 --LSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVKQEMTTTTTIISL 284
Cdd:PRK06589 362 dqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
4.51e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.01 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 96 LLLTTAI----AIKLGLTPFHFWLPEVLQGSSLPTALLLSTVM-KLPPTALLLI-------TSHSLNPTLLTTMAImSIA 163
Cdd:PRK07363 205 LILLTGLllgfGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLAIIGTI-SVI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 164 LGGWMGLNQTQTRK*LAFSSISHLGWMTSIITYDPKLTLLTfYIYTLMTTSIFLTM------------NTTNTLKLSTLM 231
Cdd:PRK07363 284 YGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLM 362
|
170 180 190
....*....|....*....|....*....|....*..
gi 154371643 232 TTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 363 NPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-189 |
7.48e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 41.23 E-value: 7.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 55 AATKYFLVQAAASTLVLFSSMINAWHTG--QWDITLLTHPP----------ACLLLttAIAIKLGLTPFHFWLPEVLQGS 122
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAKDfglgfqllcyAGLLI--AYGVKLPIVPLHTWLPDAHGEA 243
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 154371643 123 SLPTALLLSTV-MKLPPTALL------LITSHSLNPTLLTTMAIMSIALGGWMGLNQTQTRK*LAFSSISHLGW 189
Cdd:PRK02546 244 TAPVHMLLAGIlLKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-272 |
1.09e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.89 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 92 PPACLLLTTAIAIKLGLTPFHFWLPEVLQGSSLPTALLLSTVMKLPPTALLLITSHSLNPT-----LLTTMAIMSIALGG 166
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 167 WMGLNQTQTRK*LAFSSISHLGWMTSII------TYDPKLTLLTFYI-------YTLMTTSIF---LTM------NTTNT 224
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYVfvlfaalFHLMNHAIFkcaLFMgvgiidHEAGT 369
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 154371643 225 LKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQELVK 272
Cdd:PRK12646 370 RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-197 |
1.90e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 39.90 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 101 AIAIKLGLTPFHFWLPEV-LQGSSLPTALLLSTVMKLPPTALLLIT-------SHSLNPTLLtTMAIMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSwpilplgAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100
....*....|....*....|....*.
gi 154371643 173 TQTRK*LAFSSISHLGWMT-SIITYD 197
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSiTLVTHD 343
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
2.49e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 7 LMSTLSI-LLGTTMTITSSHWAMAWAGLEINTLS---IIPMISKSHHPRAVeaatkyFLVQAAASTLVLFSSMINAWH-T 81
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 82 GQWDITLLTHPPACLLLTTAIAIKLGLTPFHF--WLPEVLQGSSLPTALLLSTVMKLppTALLLITS-------HSLNPT 152
Cdd:PRK06459 148 GTTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTL--MGVYGILKmtiltqtIPIGYF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 153 LLTTMAI--MSIALGGWMGLNQTQTRK*LAFSSISHLGWMTS-----IITYDPKLTLLTFYIYTLMTTSI-------FLT 218
Cdd:PRK06459 226 GLTILAIgaFSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFahsvaktGLF 305
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 154371643 219 MNTTNTLKLSTLMTTWTKAPMLNTTLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 306 LSSGLQEKQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-116 |
3.36e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.11 E-value: 3.36e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 154371643 50 PRAVEAATKYFLVQAAASTLVLFSSMINAWHTGQWDITLL--THPPACLLLTTAIAIKLGLTPFHFWLP 116
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLP 207
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
4.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.79 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 105 KLGLtpfHFWLPEVLQGSSLPTALLLSTVMkLPPTALLLITSHSLNPTLLTTMAIMSI--ALGGW----MGLNQTQTRK* 178
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATM-VTAGVFLMIRSFPLFEKAPLTLLIITIfgALTAFfaatVGLVQNDLKKV 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 179 LAFSSISHLGWMTSIITYDPKLTLLTFYI--YTLMTTSIFL---------TMNTTNTLKLSTLMTTwtkAPMLNTTLMLT 247
Cdd:MTH00032 317 IAYSTCSQLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIG 393
|
170 180
....*....|....*....|.
gi 154371643 248 LLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 394 SFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-190 |
8.21e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.08 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 154371643 110 PFHFWLPEVLQGSSLPTALLLSTVMKLPPTALL--LITSHSLNPTLLTTMAI---MSIALGGWMGLNQTQTRK*LAFSSI 184
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVarMYPVFEQFPAVMTVIAWtgaITAFLGASIALTQNDIKKGLAYSTI 324
|
....*.
gi 154371643 185 SHLGWM 190
Cdd:PRK07376 325 SQLGYM 330
|
|
| |
