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Conserved domains on  [gi|1527181145|gb|AZI22830|]
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beta-mannosidase [Chryseobacterium taklimakanense]

Protein Classification

glycoside hydrolase family 26 protein( domain architecture ID 10008320)

glycoside hydrolase family 26 protein such as mannan endo-1,4-beta-mannosidase that catalyzes the endo hydrolysis of beta-1,4-linked mannan, galactomannan and glucomannan

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ManB2 COG4124
Beta-mannanase [Carbohydrate transport and metabolism];
46-357 3.57e-51

Beta-mannanase [Carbohydrate transport and metabolism];


:

Pssm-ID: 443300  Cd Length: 330  Bit Score: 173.76  E-value: 3.57e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145  46 KGYFVGHQDDLAYGVYWKYQDGRSDVKEVVKDFPAVYGWELGDLELGHDKNLDGVPFDKMKEFIKEGHQRGGIITLSWHP 125
Cdd:COG4124    31 AATASIVSATGAAGAGPSSGLGGGTAKLGGAVAGAGGQGAGGGGRGGALGGADNGAGAASGQLAAATTEYKLGAAALVTL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 126 NNPITGKNAWDPSNKsISEILPNGTKHELFKTYLDRVSEFISDLKdedgKPIPILWRPWHEHTGTWFWWGVNsASDEEYK 205
Cdd:COG4124   111 ASGLLAATPVSGAGG-TNGLKPGGIAHGAYDAYLDRIADFLKSLQ----AGVPVIFRPGHEMNGGWFWWGAG-ADPEDYK 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 206 AFFKFTLDYLRKTKNLHNLISVYNTGIEFNSPEEYLKRYPGDDYVDMFSFDAYQRSSVEEGHKFAEQIDGLLKNMNLAGV 285
Cdd:COG4124   185 ALWRHVVDYLRNTGGLPNLIWVWSPNGGFPSSADYLDYYPGDDYVDIVGLDGYNDGPTDPWQSFDELLDPGYDELRAFAR 264

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1527181145 286 QHKKITAIGEIGYN--QIPDHQWFTKILKPVFDKH-QFSYVLFWrnagfkpgnNEVEYYLPFKGHPSEKDFQKFY 357
Cdd:COG4124   265 AHGKPIAITETGPEpdPYDKAAWITDLLDALRAKYpKISYFIWF---------NGDDDWRVDPSPNSAAAFKKFY 330
 
Name Accession Description Interval E-value
ManB2 COG4124
Beta-mannanase [Carbohydrate transport and metabolism];
46-357 3.57e-51

Beta-mannanase [Carbohydrate transport and metabolism];


Pssm-ID: 443300  Cd Length: 330  Bit Score: 173.76  E-value: 3.57e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145  46 KGYFVGHQDDLAYGVYWKYQDGRSDVKEVVKDFPAVYGWELGDLELGHDKNLDGVPFDKMKEFIKEGHQRGGIITLSWHP 125
Cdd:COG4124    31 AATASIVSATGAAGAGPSSGLGGGTAKLGGAVAGAGGQGAGGGGRGGALGGADNGAGAASGQLAAATTEYKLGAAALVTL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 126 NNPITGKNAWDPSNKsISEILPNGTKHELFKTYLDRVSEFISDLKdedgKPIPILWRPWHEHTGTWFWWGVNsASDEEYK 205
Cdd:COG4124   111 ASGLLAATPVSGAGG-TNGLKPGGIAHGAYDAYLDRIADFLKSLQ----AGVPVIFRPGHEMNGGWFWWGAG-ADPEDYK 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 206 AFFKFTLDYLRKTKNLHNLISVYNTGIEFNSPEEYLKRYPGDDYVDMFSFDAYQRSSVEEGHKFAEQIDGLLKNMNLAGV 285
Cdd:COG4124   185 ALWRHVVDYLRNTGGLPNLIWVWSPNGGFPSSADYLDYYPGDDYVDIVGLDGYNDGPTDPWQSFDELLDPGYDELRAFAR 264

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1527181145 286 QHKKITAIGEIGYN--QIPDHQWFTKILKPVFDKH-QFSYVLFWrnagfkpgnNEVEYYLPFKGHPSEKDFQKFY 357
Cdd:COG4124   265 AHGKPIAITETGPEpdPYDKAAWITDLLDALRAKYpKISYFIWF---------NGDDDWRVDPSPNSAAAFKKFY 330
Glyco_hydro_26 pfam02156
Glycosyl hydrolase family 26;
26-258 9.65e-37

Glycosyl hydrolase family 26;


Pssm-ID: 396639  Cd Length: 311  Bit Score: 135.11  E-value: 9.65e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145  26 DPDATPETVKLYENLVKAQKKGYFVGHQDDLAYGVYWKYQdgRSDVKEVVKDFPAVYGWELGDLELGHDKNLDGVPFDKM 105
Cdd:pfam02156   2 DPNATMETRSLMAFLQEQRRHSILSGHQGGLTITRTDGTQ--ASDIFNATGDFPAIYGFDMIDGWDTLSIVEPKAAGDIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 106 kEFIKEGHQRGGIITLSWHPNNPITGKNAW--DPSNKSISEIL--PNGTKHELFKTYLDRVSEFISDLKDEDgkpIPILW 181
Cdd:pfam02156  80 -QDKKAYWRMGGIIQVSSHFDNPKTQKGVFptGTTWDQTPAVLdsLPGGAYKVLNGYLDQIAEWLNNLKDEQ---VPVLF 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1527181145 182 RPWHEHTGTWFWWGVNSASD-EEYKAFFKFTLDYLRKTKNLHNLISVYNTGiefNSPEEYLKRYPGDDYVDMFSFDAY 258
Cdd:pfam02156 156 RPLHENTGSWFWWGDKGQSTpEQYKQLFRYSVEYLRDVKGVRNLIWVYSPN---NFWDVTEANYPGDEYVDIVGFDTY 230
 
Name Accession Description Interval E-value
ManB2 COG4124
Beta-mannanase [Carbohydrate transport and metabolism];
46-357 3.57e-51

Beta-mannanase [Carbohydrate transport and metabolism];


Pssm-ID: 443300  Cd Length: 330  Bit Score: 173.76  E-value: 3.57e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145  46 KGYFVGHQDDLAYGVYWKYQDGRSDVKEVVKDFPAVYGWELGDLELGHDKNLDGVPFDKMKEFIKEGHQRGGIITLSWHP 125
Cdd:COG4124    31 AATASIVSATGAAGAGPSSGLGGGTAKLGGAVAGAGGQGAGGGGRGGALGGADNGAGAASGQLAAATTEYKLGAAALVTL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 126 NNPITGKNAWDPSNKsISEILPNGTKHELFKTYLDRVSEFISDLKdedgKPIPILWRPWHEHTGTWFWWGVNsASDEEYK 205
Cdd:COG4124   111 ASGLLAATPVSGAGG-TNGLKPGGIAHGAYDAYLDRIADFLKSLQ----AGVPVIFRPGHEMNGGWFWWGAG-ADPEDYK 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 206 AFFKFTLDYLRKTKNLHNLISVYNTGIEFNSPEEYLKRYPGDDYVDMFSFDAYQRSSVEEGHKFAEQIDGLLKNMNLAGV 285
Cdd:COG4124   185 ALWRHVVDYLRNTGGLPNLIWVWSPNGGFPSSADYLDYYPGDDYVDIVGLDGYNDGPTDPWQSFDELLDPGYDELRAFAR 264

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1527181145 286 QHKKITAIGEIGYN--QIPDHQWFTKILKPVFDKH-QFSYVLFWrnagfkpgnNEVEYYLPFKGHPSEKDFQKFY 357
Cdd:COG4124   265 AHGKPIAITETGPEpdPYDKAAWITDLLDALRAKYpKISYFIWF---------NGDDDWRVDPSPNSAAAFKKFY 330
Glyco_hydro_26 pfam02156
Glycosyl hydrolase family 26;
26-258 9.65e-37

Glycosyl hydrolase family 26;


Pssm-ID: 396639  Cd Length: 311  Bit Score: 135.11  E-value: 9.65e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145  26 DPDATPETVKLYENLVKAQKKGYFVGHQDDLAYGVYWKYQdgRSDVKEVVKDFPAVYGWELGDLELGHDKNLDGVPFDKM 105
Cdd:pfam02156   2 DPNATMETRSLMAFLQEQRRHSILSGHQGGLTITRTDGTQ--ASDIFNATGDFPAIYGFDMIDGWDTLSIVEPKAAGDIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1527181145 106 kEFIKEGHQRGGIITLSWHPNNPITGKNAW--DPSNKSISEIL--PNGTKHELFKTYLDRVSEFISDLKDEDgkpIPILW 181
Cdd:pfam02156  80 -QDKKAYWRMGGIIQVSSHFDNPKTQKGVFptGTTWDQTPAVLdsLPGGAYKVLNGYLDQIAEWLNNLKDEQ---VPVLF 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1527181145 182 RPWHEHTGTWFWWGVNSASD-EEYKAFFKFTLDYLRKTKNLHNLISVYNTGiefNSPEEYLKRYPGDDYVDMFSFDAY 258
Cdd:pfam02156 156 RPLHENTGSWFWWGDKGQSTpEQYKQLFRYSVEYLRDVKGVRNLIWVYSPN---NFWDVTEANYPGDEYVDIVGFDTY 230
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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