NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1526256126|gb|AZH29436|]
View 

glycosyl transferase [Paenibacillus sp. M-152]

Protein Classification

COG3459 family protein( domain architecture ID 11465866)

COG3459 family protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
COG3459 COG3459
Cellobiose phosphorylase [Carbohydrate transport and metabolism];
1-810 0e+00

Cellobiose phosphorylase [Carbohydrate transport and metabolism];


:

Pssm-ID: 442682 [Multi-domain]  Cd Length: 794  Bit Score: 1164.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIpVDNGGRYFYIYDD--G 78
Cdd:COG3459     1 NGYGGFDDDGREYVITGPDTPAPWINVLANPDFGFLVSETGGGYSWYKNSRENRLTRWRNDPV-SDPPGEYFYLRDEetG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  79 DYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAY 158
Cdd:COG3459    80 DYWSPTWQPVRKPLDEYECRHGFGYTRFEHEYNGIESELTYFVPLDDPVEIWRLKLTNTSDRPRRLSVTSYVEWVLGNAR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 159 DDMTNFQRNLNTGEVEIQDSVIYHKTEYRERRN-HYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASG 237
Cdd:COG3459   160 DDTANFQVTLSTGEVDPEGGAILARNPYNERFNgRVAFFAVSEPVSSFTGDREEFLGRYGSLANPAALERGKLSNSVGAG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 238 WSPIGSHCIEITLEPGEETSCNFVLGYVENPEEekwespgiinkkrAHAMIAQFADETDVERALSELRSYWNDLLSKYTL 317
Cdd:COG3459   240 LDPCAALQVDIELAPGEEKELVFLLGQGENKEE-------------ARALIARYRDPDAVDAALAEVKAYWDELLGAVQV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 318 QSHDDKLNRMVNIWNPYQCMVTFNLSRSAsYFESGigRGMGFRDSNQDLLGFVHQIPERARERIIDIASTQFENGGAYHQ 397
Cdd:COG3459   307 ETPDPALDLMVNGWLLYQTLACRLWARSA-FYQSG--GAYGFRDQLQDSMALVHARPELAREQILLAASRQFPEGDVQHW 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 398 YQPLTKKGNHevgGGFNDDPLWLIVGTSAYIKETGDFGILDEQVPFD----------------GNVDRAASLFEHLKRSF 461
Cdd:COG3459   384 WHPPTGRGVR---TRFSDDLLWLPYAVAAYIKETGDFSILDEVVPFLdgpplppgeedaydlpTVSGEEATLYEHCKRAI 460
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 462 YHVVDNLGPHGLPLIGRADWNDCLNLNCFsatpdesyqttqnlEGRiAESVFIAGLFVYTGPDFIELCKRRGLNEEAATA 541
Cdd:COG3459   461 DFSLNRLGPHGLPLIGRGDWNDGMNLVGE--------------GGK-GESVWLAWFLYYALKEFAPLAEARGDEERAERY 525
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 542 QAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGVKEgLAHKALDSTRDRLETPYG-- 619
Cdd:COG3459   526 RAEAEELREAIEKHAWDGEWYRRAYFDDGTPLGSKENEECKIDLIAQSWAVLSGAADPE-RARKAMDSVDKYLVTEYGgl 604
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 620 IVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDIHRTEPYVYAQ 699
Cdd:COG3459   605 ILLLTPPFDKYDPDPGYIKGYPPGVRENGGQYTHAAPWAIMAEALLGDGDRAYELYSMINPINHNDEADRYKVEPYVYAA 684
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 700 MIAGKDaVREGEAKNSWLTGTAAWNFIAITQSILGIQPEWDGLRIDPCIPKSWGEFTVTRVFRGDTYVIHITNPQHVSKG 779
Cdd:COG3459   685 DVYGVD-PHFGRGGWSWYTGSAGWMYRAATEYILGIRPEGDGLRIDPCIPSDWPGFSVTRRFRGAVYHITVKNPDGVSKG 763
                         810       820       830
                  ....*....|....*....|....*....|.
gi 1526256126 780 VATVTVDGTVLTNNILPVAGDGTIHQVKVLL 810
Cdd:COG3459   764 VKSITVDGKPIEGNLIPLVDDGKEHEVEVVL 794
 
Name Accession Description Interval E-value
COG3459 COG3459
Cellobiose phosphorylase [Carbohydrate transport and metabolism];
1-810 0e+00

Cellobiose phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 442682 [Multi-domain]  Cd Length: 794  Bit Score: 1164.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIpVDNGGRYFYIYDD--G 78
Cdd:COG3459     1 NGYGGFDDDGREYVITGPDTPAPWINVLANPDFGFLVSETGGGYSWYKNSRENRLTRWRNDPV-SDPPGEYFYLRDEetG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  79 DYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAY 158
Cdd:COG3459    80 DYWSPTWQPVRKPLDEYECRHGFGYTRFEHEYNGIESELTYFVPLDDPVEIWRLKLTNTSDRPRRLSVTSYVEWVLGNAR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 159 DDMTNFQRNLNTGEVEIQDSVIYHKTEYRERRN-HYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASG 237
Cdd:COG3459   160 DDTANFQVTLSTGEVDPEGGAILARNPYNERFNgRVAFFAVSEPVSSFTGDREEFLGRYGSLANPAALERGKLSNSVGAG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 238 WSPIGSHCIEITLEPGEETSCNFVLGYVENPEEekwespgiinkkrAHAMIAQFADETDVERALSELRSYWNDLLSKYTL 317
Cdd:COG3459   240 LDPCAALQVDIELAPGEEKELVFLLGQGENKEE-------------ARALIARYRDPDAVDAALAEVKAYWDELLGAVQV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 318 QSHDDKLNRMVNIWNPYQCMVTFNLSRSAsYFESGigRGMGFRDSNQDLLGFVHQIPERARERIIDIASTQFENGGAYHQ 397
Cdd:COG3459   307 ETPDPALDLMVNGWLLYQTLACRLWARSA-FYQSG--GAYGFRDQLQDSMALVHARPELAREQILLAASRQFPEGDVQHW 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 398 YQPLTKKGNHevgGGFNDDPLWLIVGTSAYIKETGDFGILDEQVPFD----------------GNVDRAASLFEHLKRSF 461
Cdd:COG3459   384 WHPPTGRGVR---TRFSDDLLWLPYAVAAYIKETGDFSILDEVVPFLdgpplppgeedaydlpTVSGEEATLYEHCKRAI 460
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 462 YHVVDNLGPHGLPLIGRADWNDCLNLNCFsatpdesyqttqnlEGRiAESVFIAGLFVYTGPDFIELCKRRGLNEEAATA 541
Cdd:COG3459   461 DFSLNRLGPHGLPLIGRGDWNDGMNLVGE--------------GGK-GESVWLAWFLYYALKEFAPLAEARGDEERAERY 525
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 542 QAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGVKEgLAHKALDSTRDRLETPYG-- 619
Cdd:COG3459   526 RAEAEELREAIEKHAWDGEWYRRAYFDDGTPLGSKENEECKIDLIAQSWAVLSGAADPE-RARKAMDSVDKYLVTEYGgl 604
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 620 IVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDIHRTEPYVYAQ 699
Cdd:COG3459   605 ILLLTPPFDKYDPDPGYIKGYPPGVRENGGQYTHAAPWAIMAEALLGDGDRAYELYSMINPINHNDEADRYKVEPYVYAA 684
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 700 MIAGKDaVREGEAKNSWLTGTAAWNFIAITQSILGIQPEWDGLRIDPCIPKSWGEFTVTRVFRGDTYVIHITNPQHVSKG 779
Cdd:COG3459   685 DVYGVD-PHFGRGGWSWYTGSAGWMYRAATEYILGIRPEGDGLRIDPCIPSDWPGFSVTRRFRGAVYHITVKNPDGVSKG 763
                         810       820       830
                  ....*....|....*....|....*....|.
gi 1526256126 780 VATVTVDGTVLTNNILPVAGDGTIHQVKVLL 810
Cdd:COG3459   764 VKSITVDGKPIEGNLIPLVDDGKEHEVEVVL 794
Glyco_hydro_36 pfam17167
Glycosyl hydrolase 36 superfamily, catalytic domain; This is the catalytic region of the ...
307-736 0e+00

Glycosyl hydrolase 36 superfamily, catalytic domain; This is the catalytic region of the superfamily of enzymes referred to as GH36. UniProtKB:Q76IQ9 is a chitobiose phosphorylase that catalyzes the reversible phosphorolysis of chitobiose into alpha-GlcNAc-1-phosphate and GlcNAc with inversion of the anomeric configuration. The full-length enzyme comprises a beta sandwich domain and an (alpha/alpha)(6) barrel domain. The alpha-helical barrel component of the domain, this family, is the catalytic region.


Pssm-ID: 465366  Cd Length: 425  Bit Score: 589.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 307 YWNDLLSKYTLQSHDDKLNRMVNIWNPYQCMVTFNLSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPERARERIIDIAS 386
Cdd:pfam17167   1 YWDSRLEKFQVKTPDESLDTMINIWNLYQCEICFVWSRFASFIESGGRTGYGFRDTAQDIIGVPHMNPEMTRKRILDLAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 387 TQFENGGAYHQYQPL--------------TKKGNHEVGG---GFNDDPLWLIVGTSAYIKETGDFGILDEQVPFDGNvdR 449
Cdd:pfam17167  81 GQFKAGYGLHLFDPDwddikpsksptvlpTPYDNDKIHGigdTCSDDHLWLVPTIEAYVKETGDFSFLDEVIPYSDG--K 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 450 AASLFEHLKRSFYHVVDNLGPHGLPLIGRADWNDCLNLNCfsatpdesyqttqnlegriAESVFIAGLFVYTGPDFIELC 529
Cdd:pfam17167 159 KATVYEHLKKAIDFSLEYLGQHGIPLGGRADWNDCLNLGG-------------------GESVFVSFLLYLALQEFIEIA 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 530 KRRGLNEEAATAQAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGvKEGLAHKALDS 609
Cdd:pfam17167 220 KFKGDDEDAEWYEKMADKVREAIEKYAWDGEWYIRAYTKDGDKIGSKQNEEGKIHLESQSWAVLSGIG-KDERAKKAMDS 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 610 TRDRLETPYGIVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDI 689
Cdd:pfam17167 299 VEKYLFTEYGLHLNQPPFSTPNLDIGFITRYYPGVKENGGIFCHPNPWVIVAETKLGRGDRAMKLYDAINPANQNDIIET 378
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1526256126 690 HRTEPYVYAQMIAGKDAVREGEAKNSWLTGTAAWNFIAITQSILGIQ 736
Cdd:pfam17167 379 RKAEPYVYAQFVMGKDHPDHGRANHPWLTGTAGWAYVAITEGILGLR 425
GH94N_CBP_like cd11754
N-terminal domain of cellobiose phosphorylase (CBP) and similar proteins; The glycoside ...
1-303 0e+00

N-terminal domain of cellobiose phosphorylase (CBP) and similar proteins; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20) or cellobiose:phosphate alpha-D-glucosyltransferase, or CepA. This N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. Cellobiose phosphorylase participates in the degradation of cellulose, it catalyzes the phosphate dependent hydrolysis of cellobiose into alpha-D-glucose-1-phosphate and D-glucose, a reversible reaction.


Pssm-ID: 213070 [Multi-domain]  Cd Length: 303  Bit Score: 581.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIPVDNGGRYFYIYDDGDY 80
Cdd:cd11754     1 MKYGHFDDENREYVITTPDTPLPWINYLGSEDFFSLISNTAGGYSFYKDARLRRLTRYRYNNVPLDNGGRYFYIKDGGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  81 WTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAYDD 160
Cdd:cd11754    81 WNPGWKPVKTPLDSYECRHGLGYTRITGEKNGIEAEVLYFVPLGENAEIWRLTLTNTSDSPKKLKLFSFVEFCLWNALDD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 161 MTNFQRNLNTGEVEIQDSVIYHKTEYRERRNHYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASGWSP 240
Cdd:cd11754   161 MTNFQRNLSTGEVEVEGSVIYHKTEYRERRNHYAFFAVNAPIDGFDTDRDAFLGLYNGFDEPQAVLEGKSTNSVAHGWSP 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1526256126 241 IGSHCIEITLEPGEETSCNFVLGYVENPEEEKWESPGIINKKRAHAMIAQFADETDVERALSE 303
Cdd:cd11754   241 IGSHHVELTLAPGESKELIFVLGYVENPDDEKWESPGVINKKPAKELIERFATPEAVDAAFAE 303
CBM_X smart01068
Putative carbohydrate binding domain;
1-49 1.87e-15

Putative carbohydrate binding domain;


Pssm-ID: 215008 [Multi-domain]  Cd Length: 62  Bit Score: 71.07  E-value: 1.87e-15
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1526256126    1 MKYGFFDDANQEYVIH--TPQTPYPWINYLGNERFFGLISNTGGGYAFYRD 49
Cdd:smart01068   1 NGLGGFDDDGREYVRTldGPDTPAPWINVLSNGRYGVMVSASGSGYSRWAD 51
 
Name Accession Description Interval E-value
COG3459 COG3459
Cellobiose phosphorylase [Carbohydrate transport and metabolism];
1-810 0e+00

Cellobiose phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 442682 [Multi-domain]  Cd Length: 794  Bit Score: 1164.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIpVDNGGRYFYIYDD--G 78
Cdd:COG3459     1 NGYGGFDDDGREYVITGPDTPAPWINVLANPDFGFLVSETGGGYSWYKNSRENRLTRWRNDPV-SDPPGEYFYLRDEetG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  79 DYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAY 158
Cdd:COG3459    80 DYWSPTWQPVRKPLDEYECRHGFGYTRFEHEYNGIESELTYFVPLDDPVEIWRLKLTNTSDRPRRLSVTSYVEWVLGNAR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 159 DDMTNFQRNLNTGEVEIQDSVIYHKTEYRERRN-HYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASG 237
Cdd:COG3459   160 DDTANFQVTLSTGEVDPEGGAILARNPYNERFNgRVAFFAVSEPVSSFTGDREEFLGRYGSLANPAALERGKLSNSVGAG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 238 WSPIGSHCIEITLEPGEETSCNFVLGYVENPEEekwespgiinkkrAHAMIAQFADETDVERALSELRSYWNDLLSKYTL 317
Cdd:COG3459   240 LDPCAALQVDIELAPGEEKELVFLLGQGENKEE-------------ARALIARYRDPDAVDAALAEVKAYWDELLGAVQV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 318 QSHDDKLNRMVNIWNPYQCMVTFNLSRSAsYFESGigRGMGFRDSNQDLLGFVHQIPERARERIIDIASTQFENGGAYHQ 397
Cdd:COG3459   307 ETPDPALDLMVNGWLLYQTLACRLWARSA-FYQSG--GAYGFRDQLQDSMALVHARPELAREQILLAASRQFPEGDVQHW 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 398 YQPLTKKGNHevgGGFNDDPLWLIVGTSAYIKETGDFGILDEQVPFD----------------GNVDRAASLFEHLKRSF 461
Cdd:COG3459   384 WHPPTGRGVR---TRFSDDLLWLPYAVAAYIKETGDFSILDEVVPFLdgpplppgeedaydlpTVSGEEATLYEHCKRAI 460
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 462 YHVVDNLGPHGLPLIGRADWNDCLNLNCFsatpdesyqttqnlEGRiAESVFIAGLFVYTGPDFIELCKRRGLNEEAATA 541
Cdd:COG3459   461 DFSLNRLGPHGLPLIGRGDWNDGMNLVGE--------------GGK-GESVWLAWFLYYALKEFAPLAEARGDEERAERY 525
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 542 QAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGVKEgLAHKALDSTRDRLETPYG-- 619
Cdd:COG3459   526 RAEAEELREAIEKHAWDGEWYRRAYFDDGTPLGSKENEECKIDLIAQSWAVLSGAADPE-RARKAMDSVDKYLVTEYGgl 604
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 620 IVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDIHRTEPYVYAQ 699
Cdd:COG3459   605 ILLLTPPFDKYDPDPGYIKGYPPGVRENGGQYTHAAPWAIMAEALLGDGDRAYELYSMINPINHNDEADRYKVEPYVYAA 684
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 700 MIAGKDaVREGEAKNSWLTGTAAWNFIAITQSILGIQPEWDGLRIDPCIPKSWGEFTVTRVFRGDTYVIHITNPQHVSKG 779
Cdd:COG3459   685 DVYGVD-PHFGRGGWSWYTGSAGWMYRAATEYILGIRPEGDGLRIDPCIPSDWPGFSVTRRFRGAVYHITVKNPDGVSKG 763
                         810       820       830
                  ....*....|....*....|....*....|.
gi 1526256126 780 VATVTVDGTVLTNNILPVAGDGTIHQVKVLL 810
Cdd:COG3459   764 VKSITVDGKPIEGNLIPLVDDGKEHEVEVVL 794
Glyco_hydro_36 pfam17167
Glycosyl hydrolase 36 superfamily, catalytic domain; This is the catalytic region of the ...
307-736 0e+00

Glycosyl hydrolase 36 superfamily, catalytic domain; This is the catalytic region of the superfamily of enzymes referred to as GH36. UniProtKB:Q76IQ9 is a chitobiose phosphorylase that catalyzes the reversible phosphorolysis of chitobiose into alpha-GlcNAc-1-phosphate and GlcNAc with inversion of the anomeric configuration. The full-length enzyme comprises a beta sandwich domain and an (alpha/alpha)(6) barrel domain. The alpha-helical barrel component of the domain, this family, is the catalytic region.


Pssm-ID: 465366  Cd Length: 425  Bit Score: 589.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 307 YWNDLLSKYTLQSHDDKLNRMVNIWNPYQCMVTFNLSRSASYFESGIGRGMGFRDSNQDLLGFVHQIPERARERIIDIAS 386
Cdd:pfam17167   1 YWDSRLEKFQVKTPDESLDTMINIWNLYQCEICFVWSRFASFIESGGRTGYGFRDTAQDIIGVPHMNPEMTRKRILDLAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 387 TQFENGGAYHQYQPL--------------TKKGNHEVGG---GFNDDPLWLIVGTSAYIKETGDFGILDEQVPFDGNvdR 449
Cdd:pfam17167  81 GQFKAGYGLHLFDPDwddikpsksptvlpTPYDNDKIHGigdTCSDDHLWLVPTIEAYVKETGDFSFLDEVIPYSDG--K 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 450 AASLFEHLKRSFYHVVDNLGPHGLPLIGRADWNDCLNLNCfsatpdesyqttqnlegriAESVFIAGLFVYTGPDFIELC 529
Cdd:pfam17167 159 KATVYEHLKKAIDFSLEYLGQHGIPLGGRADWNDCLNLGG-------------------GESVFVSFLLYLALQEFIEIA 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 530 KRRGLNEEAATAQAHVDRMRTATLEHGFDGEWFLRAYDHYGNKIGSKDCEEGQIFIEPQGFCVMAGIGvKEGLAHKALDS 609
Cdd:pfam17167 220 KFKGDDEDAEWYEKMADKVREAIEKYAWDGEWYIRAYTKDGDKIGSKQNEEGKIHLESQSWAVLSGIG-KDERAKKAMDS 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 610 TRDRLETPYGIVLQHPPYSRYYMNLGEISSYPPGYKENAGIFCHNNPWIMMAEAVIGRGDRAFELYSKIAPAYLEDISDI 689
Cdd:pfam17167 299 VEKYLFTEYGLHLNQPPFSTPNLDIGFITRYYPGVKENGGIFCHPNPWVIVAETKLGRGDRAMKLYDAINPANQNDIIET 378
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1526256126 690 HRTEPYVYAQMIAGKDAVREGEAKNSWLTGTAAWNFIAITQSILGIQ 736
Cdd:pfam17167 379 RKAEPYVYAQFVMGKDHPDHGRANHPWLTGTAGWAYVAITEGILGLR 425
GH94N_CBP_like cd11754
N-terminal domain of cellobiose phosphorylase (CBP) and similar proteins; The glycoside ...
1-303 0e+00

N-terminal domain of cellobiose phosphorylase (CBP) and similar proteins; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20) or cellobiose:phosphate alpha-D-glucosyltransferase, or CepA. This N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. Cellobiose phosphorylase participates in the degradation of cellulose, it catalyzes the phosphate dependent hydrolysis of cellobiose into alpha-D-glucose-1-phosphate and D-glucose, a reversible reaction.


Pssm-ID: 213070 [Multi-domain]  Cd Length: 303  Bit Score: 581.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIPVDNGGRYFYIYDDGDY 80
Cdd:cd11754     1 MKYGHFDDENREYVITTPDTPLPWINYLGSEDFFSLISNTAGGYSFYKDARLRRLTRYRYNNVPLDNGGRYFYIKDGGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  81 WTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAYDD 160
Cdd:cd11754    81 WNPGWKPVKTPLDSYECRHGLGYTRITGEKNGIEAEVLYFVPLGENAEIWRLTLTNTSDSPKKLKLFSFVEFCLWNALDD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 161 MTNFQRNLNTGEVEIQDSVIYHKTEYRERRNHYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASGWSP 240
Cdd:cd11754   161 MTNFQRNLSTGEVEVEGSVIYHKTEYRERRNHYAFFAVNAPIDGFDTDRDAFLGLYNGFDEPQAVLEGKSTNSVAHGWSP 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1526256126 241 IGSHCIEITLEPGEETSCNFVLGYVENPEEEKWESPGIINKKRAHAMIAQFADETDVERALSE 303
Cdd:cd11754   241 IGSHHVELTLAPGESKELIFVLGYVENPDDEKWESPGVINKKPAKELIERFATPEAVDAAFAE 303
GH94N_ChBP_like cd11755
N-terminal domain of chitobiose phosphorylase (ChBP) and similar proteins; The glycoside ...
1-303 2.09e-92

N-terminal domain of chitobiose phosphorylase (ChBP) and similar proteins; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes chitobiose phosphorylase (EC:2.4.1.-). This N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. Chitobiose phosphorylase catalyzes the reversible phosphate dependent hydrolysis of chitobiose [(GlcNAc)2] into alpha-GlcNAc-1-phosphate and GlcNAc. In some organisms, ChBP may be involved in the production of GlcNac-6-phosphate in intracellular pathways.


Pssm-ID: 213071 [Multi-domain]  Cd Length: 300  Bit Score: 292.22  E-value: 2.09e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   1 MKYGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIPVDNGGRYFYIYD--DG 78
Cdd:cd11755     1 MKYGYFDDENREYVITRPDTPTPWTNYLGSGEYGAIISNNAGGYSFYKSPANGRITRFRFNSVPMDRPGRYVYLRDneSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  79 DYWTPGWMPVKRELEQ--YECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCL-W 155
Cdd:cd11755    81 DYWSASWQPVGKPLDEykYECRHGTGYTTIESEYKGIAAETTYFVPLDQDYEIWDVKITNTSSRKRKLSVFSYAEFSFhW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 156 NAYDDMTNFQRNLNTGEVEIQDSVIYHKTEYRERRNH-----YAFFD-ANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQ 229
Cdd:cd11755   161 NAEQDQQNLQYSLYISRTSYKDGIIEYDNYYNLDDDPngderYRFFTsAGAEVDGFDGSRDRFIGPYRSESNPIAVERGK 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1526256126 230 ASNSIASGWSPIGSHCIEITLEPGEETSCNFVLGYVenpeeekwespgiiNKKRAHAMIAQFADETDVERALSE 303
Cdd:cd11755   241 CSNSLATGGNHCGALQSDITLAPGEEKEIIFILGVG--------------NREEGRAIRAKYSDPEAVDAEFEA 300
Glyco_transf_36 pfam06165
Glycosyltransferase family 36; The glycosyltransferase family 36 includes cellobiose ...
21-263 2.47e-92

Glycosyltransferase family 36; The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain.


Pssm-ID: 461842 [Multi-domain]  Cd Length: 247  Bit Score: 289.78  E-value: 2.47e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  21 PYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRyNNIPVDNGGRYFYIYDD--GDYWTPGWMPVKRELEqYECR 98
Cdd:pfam06165   1 PAPWINVLSNGDYGVLISNTGGGYSWYKNSRENRLTRWR-NDPVRDPPGEYIYIRDEesGEVWSPTWQPVRKPLD-YEVR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  99 HGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAYDDMTN--FQRNLNTGEVEI- 175
Cdd:pfam06165  79 HGLGYTRFEREDGGIETELTVFVPPEDPVEIRRLTLTNTSDRERRLSVTSYVEWVLGNAAADLAHpaFSRLFSQTEIVTe 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 176 QDSVIYHKTEY-RERRNHYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQTITAGQASNSIASGWSPIGSHCIEITLEPGE 254
Cdd:pfam06165 159 LGAILAARNPRsEEFRNRYAFHAVSGPVDSYETDREEFIGRGGSLANPAALERGPLSNSVGAGLDPCAALQVRIELAPGE 238

                  ....*....
gi 1526256126 255 ETSCNFVLG 263
Cdd:pfam06165 239 TKEVVFILG 247
GH94N_like_4 cd11751
Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function; The ...
66-270 1.51e-48

Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. The GH64N domain, as represented by this model, is found near the N-terminus of GH94 members and related proteins with uncharacterized specificities.


Pssm-ID: 213067  Cd Length: 223  Bit Score: 171.01  E-value: 1.51e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  66 DNGGRYFYIYDD--GDYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKK 143
Cdd:cd11751     6 DNWGKYFYIRDDdtGEVWSATYKPLKTEPEDYECVHGIGYSEFTSEYNGIRSSLTVFVPKDDPVEIWSLTLRNTSDRERR 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 144 IKLFSFVEFCLWNAYDD---------MTNFQRNLNTGEVEiqdsvIYHKTEYRERRNHY-------AFFDANRPLAGYDT 207
Cdd:cd11751    86 LSVFSYFEWELGGFPDEhrefhklfiETSFDRELNGIYAR-----KYLWGFPDEKGRHNnrnwpyvAFHAASEPVVSYDG 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1526256126 208 DCEAFLGLYNGLDQPQTITAGQASNSIASGWSPIGSHCIEITLEPGEETSCNFVLGYVENPEE 270
Cdd:cd11751   161 DKESFIGMYGSEENPDAVAMGGLSNSVGRFEDAIGVLQHEVTLEPGEEKTIHFTLGAAESGEE 223
GH94N_like cd11746
N-terminal domain of glycoside hydrolase family 94 and related domains; The glycoside ...
70-264 1.16e-38

N-terminal domain of glycoside hydrolase family 94 and related domains; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. This GH64N domain also occurs in tandem repeat arrangements (not at the N-terminus) in cyclic beta 1-2 glucan synthetase and related proteins, and as a standalone domain in distantly related proteins of unknown function.


Pssm-ID: 213062  Cd Length: 179  Bit Score: 141.87  E-value: 1.16e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  70 RYFYIYDDGDYWTPGWMPVKRELEQYECRhgLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSF 149
Cdd:cd11746     1 FYFYLSDDGDKWSLGWQPVRREAEHYEVR--LGYVTFENEYNGIEAETTIFVPPDDPGEIQRVKLTNTGDRPRELTLFPY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 150 VEFCLWNAYddmtnfqrnLNTGEVEIQDSVIYHKTEYRE-RRNHYAFFDANRPLAGYDTDCEaflglyNGLDQPQTITAG 228
Cdd:cd11746    79 FEWCLPDAL---------FQGTSYDPEGGAVNCTTYYSYnIGARPAFYATSFKPDDFDGDGG------RTLANPLAVVAG 143
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1526256126 229 QASNSIASGWSPIGSHCIEITLEPGEETSCNFVLGY 264
Cdd:cd11746   144 QLSNTVGRVEDPIAALAIRFALEPGESKRYTFALGI 179
GH94N_ChvB_NdvB_1_like cd11756
First GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains; The glycoside ...
3-270 4.03e-37

First GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This first of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.


Pssm-ID: 213072 [Multi-domain]  Cd Length: 284  Bit Score: 140.72  E-value: 4.03e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   3 YGFFDDANQEYVIHTPQ---TPYPWINYLGNERFFGLISNTGGGYAFYRdarlrrltryryN----------NIPV-DNG 68
Cdd:cd11756     8 YGGFSPDGREYVIVLGPgkrTPAPWINVIANPGFGFLVSESGSGYTWAE------------NsrenrltpwsNDPVsDPP 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  69 GRYFYIYDD--GDYWTPGWMPVkRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLsfDGEVH--QVKLQNTSLQTKKI 144
Cdd:cd11756    76 GEALYLRDEetGEVWSPTPLPI-RGGGPYRVRHGFGYSRFEHRSHGIEQELTVFVPR--DDPVKisRLRLRNTSGRPRRL 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 145 KLFSFVEFCLWNAYDDMTNFqrnLNTGEVEIQDSVIYHKTEYRERRNHYAFFDANRPLAGYDTDCEAFLGLYNGLDQPQT 224
Cdd:cd11756   153 SVTYYAEWVLGVNREKTAPH---IVTEYDEETGALLARNPYNEDFGGRVAFLAVSGGPRSFTGDRREFIGRNGSLANPAA 229
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1526256126 225 ITAGQASNSIASGWSPIGSHCIEITLEPGEETSCNFVLGYVENPEE 270
Cdd:cd11756   230 LKRGRLSGRTGAGLDPCAALQVDLELAPGEEKEIVFLLGEADDAEE 275
GH94N_like_3 cd11750
Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function; The ...
3-272 1.43e-27

Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel]. The GH64N domain, as represented by this model, is found at the N-terminus of GH94 members with uncharacterized specificities.


Pssm-ID: 213066 [Multi-domain]  Cd Length: 282  Bit Score: 113.34  E-value: 1.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126   3 YGFFDDANQEYVIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDARLRRLTRYRYNNIPVDNGGRYFYIY--DDGDY 80
Cdd:cd11750     1 YGYFDDANKEYVITTPKTPIKWINYVGTLDFGGFVDHTGGSLVCKGDPALNRITKYIAQLPSSDFKGSTIYIRvkDGDNY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  81 --WTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAY 158
Cdd:cd11750    81 kiFSPFYVPTLDKYDKYECHVGLGYSRIIAEAYGIRTEITIFVPEGDQVLLQDIKVTNIRDKPVEVDVIPVVEYTHFDAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 159 DDMTNF----QRNLNTGEVEIQDSVIYHKTEYRERRNHYAFFDANRPLAGYDTDCEAFLGL--YNGLDQPQTITAGQASN 232
Cdd:cd11750   161 KQLTNAdwvpQTMTSKAHQEENGHTVLEQYAFMKRDYAVNYFTSNRPVSSFEGDRRSFLGQneYGTWANPLSLQNDELSN 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1526256126 233 SIASGWSPIGSHCIEI-TLEPGEETSCNFVLGYVENPEEEK 272
Cdd:cd11750   241 YECLRGDNIGALMHHLgWLAPGETKRVITQLGQEESLKAAQ 281
GH94N_ChvB_NdvB_2_like cd11753
Second GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains; The glycoside ...
14-301 1.26e-15

Second GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This second of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.


Pssm-ID: 213069 [Multi-domain]  Cd Length: 336  Bit Score: 79.10  E-value: 1.26e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  14 VIHTPQTPYPWINYLGNERFFGLISNTGGGYAFYRDarlrrltryrynnIPV---------DNGGRYFYIYD--DGDYWT 82
Cdd:cd11753    52 RFTTPDTALPEVHLLSNGRYSVMLTASGSGYSRWND-------------LAVtrwredatrDNWGSFIYLRDvdSGKVWS 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  83 PGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKLFSFVEFCLWNAYDDMT 162
Cdd:cd11753   119 ATYQPTRDPPDEYEVVFSEDRAEFRRRDGGIETTTEVVVSPEDDAEIRRVTLTNLSRRPRELEVTSYAEVVLAPPAADEA 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 163 N--FQrNL--NTGEVEIQDSVIYHkteyRERRNH-----YAFF------DANRPLaGYDTDCEAFLGLYNGLDQPQTITA 227
Cdd:cd11753   199 HpaFS-KLfvQTEFLPEQGALLAT----RRPRSPdepppWAAHfvavegEAVGPL-QYETDRARFIGRGRSLANPAAMDD 272
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1526256126 228 GQA-SNSIASGWSPIGSHCIEITLEPGEETSCNFVLGYVENPEEekwespgiinkkrAHAMIAQFADETDVERAL 301
Cdd:cd11753   273 GAPlSGTVGAVLDPIFSLRRRVRLPPGETARVTFVTGVADSREE-------------ALELADKYRDPSAVERAF 334
CBM_X smart01068
Putative carbohydrate binding domain;
1-49 1.87e-15

Putative carbohydrate binding domain;


Pssm-ID: 215008 [Multi-domain]  Cd Length: 62  Bit Score: 71.07  E-value: 1.87e-15
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1526256126    1 MKYGFFDDANQEYVIH--TPQTPYPWINYLGNERFFGLISNTGGGYAFYRD 49
Cdd:smart01068   1 NGLGGFDDDGREYVRTldGPDTPAPWINVLSNGRYGVMVSASGSGYSRWAD 51
GH94N_NdvB_like cd11748
Glycoside hydrolase family 94 N-terminal-like domain of NdvB-like proteins; The glycoside ...
69-270 4.08e-07

Glycoside hydrolase family 94 N-terminal-like domain of NdvB-like proteins; The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel)]. The GH64N domain, as represented by this model, is found at the N-terminus of largely uncharacterized proteins, some members from Xanthomonas campestris and related organisms are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.


Pssm-ID: 213064 [Multi-domain]  Cd Length: 294  Bit Score: 52.32  E-value: 4.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126  69 GRYFYIYDD--GDYWTPGWMPVKRELEQYECRHGLGYTSIMGERRGIRATQLAFVPLSFDGEVHQVKLQNTSLQTKKIKL 146
Cdd:cd11748    75 GRFFYVKDEdtGELFSAPYEPVRRPPDSFAFSVGKNDIRWVVEQDGLEVELTLSLPVDDPAELWEVKVRNLSDRARKLSL 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1526256126 147 FSF--VEFCLW----NAYDDmtnfqrNLNTgevEIQDSVI-YHKTEYRERRNHY---AFFDANRPLAGYDTDCEAFLGLy 216
Cdd:cd11748   155 YPYfpVGYMSWmnqsARYDE------GLNA---IVASSVTpYQKVEDYFKNKDLkdkTFLLADRKPDSWEARQEAFEGE- 224
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1526256126 217 NGLDQPQTITAGQASNSIASGWSPIGSHCIEITLEPGEETSCNFVLGYVENPEE 270
Cdd:cd11748   225 GGLHNPSALQAPTLANGDARYETPAAVMQYRLTLDPGETEQYRFVFGPAKDEAE 278
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH