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Conserved domains on  [gi|1524083810|gb|AZB82111|]
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NADH-plastoquinone oxidoreductase subunit 1 (chloroplast) [Schizachyrium ursulus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10000030)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
1-362 0e+00

NADH dehydrogenase subunit 1


:

Pssm-ID: 214341  Cd Length: 363  Bit Score: 687.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810   1 MIIDRVEVETINSFSKSELLKEIYGLIWIL-PILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGT 79
Cdd:CHL00032    1 MIIDTTEVQAINSFSRLESLKEVYGLIWILvPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  80 KLLLKEDILPSRGEIPLFSIGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSG 159
Cdd:CHL00032   81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 160 GLRAAAQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEEL 239
Cdd:CHL00032  161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 240 VAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQMNKIIGILEMVIGIFITLTKAYLFLFI 319
Cdd:CHL00032  241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINKTGGVFGTTIGIFITLAKTYLFLFI 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1524083810 320 SITIRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSSQLVSL 362
Cdd:CHL00032  321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
1-362 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 687.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810   1 MIIDRVEVETINSFSKSELLKEIYGLIWIL-PILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGT 79
Cdd:CHL00032    1 MIIDTTEVQAINSFSRLESLKEVYGLIWILvPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  80 KLLLKEDILPSRGEIPLFSIGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSG 159
Cdd:CHL00032   81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 160 GLRAAAQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEEL 239
Cdd:CHL00032  161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 240 VAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQMNKIIGILEMVIGIFITLTKAYLFLFI 319
Cdd:CHL00032  241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINKTGGVFGTTIGIFITLAKTYLFLFI 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1524083810 320 SITIRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSSQLVSL 362
Cdd:CHL00032  321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
26-354 2.88e-131

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 378.32  E-value: 2.88e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:COG1005    89 IPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSSTVDIVEAQSKYgffGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV 265
Cdd:COG1005   169 GSLNLSEIVEAQAGG---LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 266 SSLFVTVLYLGGWNFSIPYISFFGffqmnkiigilemVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLP 345
Cdd:COG1005   246 VSALATTLFLGGWLGPFPILPLGG-------------LPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLP 312

                  ....*....
gi 1524083810 346 ISLGNLLLT 354
Cdd:COG1005   313 LSLVNLVLT 321
NADHdh pfam00146
NADH dehydrogenase;
32-354 9.23e-120

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 348.31  E-value: 9.23e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  32 ILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLS 111
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 112 FLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTV 191
Cdd:pfam00146  82 FAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 192 DIVEAQSKygffGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVT 271
Cdd:pfam00146 162 EIVEAQAG----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 272 VLYLGGWNFSIPYISFFGFFqmnkiigilemvigifitlTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISLGNL 351
Cdd:pfam00146 238 TLFLGGWLGPFPLPGLLWFL-------------------LKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANL 298

                  ...
gi 1524083810 352 LLT 354
Cdd:pfam00146 299 LLT 301
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
33-351 6.30e-84

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 258.10  E-value: 6.30e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  33 LALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLSF 112
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 113 LVIPLG--------YRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLL 184
Cdd:NF040610   97 VAIPFGaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 185 SNSSSTVDIVEAQSKYgffgWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLL 264
Cdd:NF040610  177 AGSLNIVEIVEAQSPI----WFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLI 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 265 VSSLFVTVLYLGGWNFSipyisffGFFQMNKIIGILEMVIgifITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLL 344
Cdd:NF040610  253 LGSFLVVLLFLGGWNLP-------GFVTDIPVLGIILPTL---FFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLL 322

                  ....*..
gi 1524083810 345 PISLGNL 351
Cdd:NF040610  323 PLSLLNL 329
 
Name Accession Description Interval E-value
ndhA CHL00032
NADH dehydrogenase subunit 1
1-362 0e+00

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 687.07  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810   1 MIIDRVEVETINSFSKSELLKEIYGLIWIL-PILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGT 79
Cdd:CHL00032    1 MIIDTTEVQAINSFSRLESLKEVYGLIWILvPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  80 KLLLKEDILPSRGEIPLFSIGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSG 159
Cdd:CHL00032   81 KLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 160 GLRAAAQSISYEIPLTFCVLAISLLSNSSSTVDIVEAQSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEEL 239
Cdd:CHL00032  161 GLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEEL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 240 VAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSIPYISFFGFFQMNKIIGILEMVIGIFITLTKAYLFLFI 319
Cdd:CHL00032  241 VAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIPYIFIPELFEINKTGGVFGTTIGIFITLAKTYLFLFI 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1524083810 320 SITIRWTLPRMRMDQLLNLGWKFLLPISLGNLLLTTSSQLVSL 362
Cdd:CHL00032  321 SITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQLLSL 363
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
26-354 2.88e-131

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 378.32  E-value: 2.88e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:COG1005     9 LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:COG1005    89 IPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLA 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSSTVDIVEAQSKYgffGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV 265
Cdd:COG1005   169 GSLNLSEIVEAQAGG---LWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 266 SSLFVTVLYLGGWNFSIPYISFFGffqmnkiigilemVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLP 345
Cdd:COG1005   246 VSALATTLFLGGWLGPFPILPLGG-------------LPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLP 312

                  ....*....
gi 1524083810 346 ISLGNLLLT 354
Cdd:COG1005   313 LSLVNLVLT 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
26-354 1.42e-126

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 366.05  E-value: 1.42e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:PRK06076   90 IPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSSTVDIVEAQSkygfFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV 265
Cdd:PRK06076  170 GSLNLSDIVEAQF----LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMIL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 266 SSLFVTVLYLGGWNFSIPyisffgffqmnkiigILEMVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLP 345
Cdd:PRK06076  246 VSALITTLFLGGWLPPFP---------------LGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLP 310

                  ....*....
gi 1524083810 346 ISLGNLLLT 354
Cdd:PRK06076  311 LSLVNLLLT 319
NADHdh pfam00146
NADH dehydrogenase;
32-354 9.23e-120

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 348.31  E-value: 9.23e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  32 ILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLS 111
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 112 FLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTV 191
Cdd:pfam00146  82 FAVIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 192 DIVEAQSKygffGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVT 271
Cdd:pfam00146 162 EIVEAQAG----GWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 272 VLYLGGWNFSIPYISFFGFFqmnkiigilemvigifitlTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISLGNL 351
Cdd:pfam00146 238 TLFLGGWLGPFPLPGLLWFL-------------------LKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANL 298

                  ...
gi 1524083810 352 LLT 354
Cdd:pfam00146 299 LLT 301
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
33-351 6.30e-84

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 258.10  E-value: 6.30e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  33 LALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLSF 112
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 113 LVIPLG--------YRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLL 184
Cdd:NF040610   97 VAIPFGaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 185 SNSSSTVDIVEAQSKYgffgWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLL 264
Cdd:NF040610  177 AGSLNIVEIVEAQSPI----WFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLI 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 265 VSSLFVTVLYLGGWNFSipyisffGFFQMNKIIGILEMVIgifITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLL 344
Cdd:NF040610  253 LGSFLVVLLFLGGWNLP-------GFVTDIPVLGIILPTL---FFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLL 322

                  ....*..
gi 1524083810 345 PISLGNL 351
Cdd:NF040610  323 PLSLLNL 329
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
26-356 2.55e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 194.56  E-value: 2.55e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:MTH00054   82 TLAFIAWGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSSTVDIVEAQSKYGFFgwnLWRQPIGfLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV 265
Cdd:MTH00054  162 GSLNLTEIVLAQKNIWFI---FPLFPAA-IMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIIL 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 266 SSLFVTVLYLGGW-NFSIPYISFFGFFQMNKIIGILemvigifitltkayLFLFisITIRWTLPRMRMDQLLNLGWKFLL 344
Cdd:MTH00054  238 MSTFGVILFLGGWlVISGPTSYFSNFVWFGIKIALI--------------IFLF--IWIRASYPRIRYDQLMALLWKSYL 301
                         330
                  ....*....|..
gi 1524083810 345 PISLGNLLLTTS 356
Cdd:MTH00054  302 PLSLAFVVLVSG 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
29-356 2.12e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 189.56  E-value: 2.12e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  29 ILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISI 108
Cdd:MTH00216    9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 109 LLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSS 188
Cdd:MTH00216   89 LIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 189 STVDIVEAQSKYGFFGWNLWrqPIGfLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSL 268
Cdd:MTH00216  169 SITEIVLAQNNGIWFFFPLF--PVA-IMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 269 FVTVLYLGGWNFSIPYISffgffqmnkiigilemvIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISL 348
Cdd:MTH00216  246 LTTILFLGGWLSPIKYFK-----------------GGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSL 308

                  ....*...
gi 1524083810 349 GNLLLTTS 356
Cdd:MTH00216  309 GVVIFVAS 316
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
49-353 5.81e-56

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 185.07  E-value: 5.81e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  49 LEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLSFLVIPLGYRFVLadLSI 128
Cdd:MTH00143   24 LERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSSSY--FGW 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 129 GVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTVDIveaqSKYGFFGWNLW 208
Cdd:MTH00143  102 GLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEI----SESQFSVWLGF 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 209 RQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVTVLYLGGWNFSipyisff 288
Cdd:MTH00143  178 LMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVL------- 250
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524083810 289 gffqmNKIIGILEMVIGIFItltkAYLFLFisitIRWTLPRMRMDQLLNLGWKFLLPISLGNLLL 353
Cdd:MTH00143  251 -----FLLGGVVFMFKVLFF----AFLFIW----VRASYPRFRYDLLMMLCWKSFLPFSLSILVL 302
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
30-354 7.60e-54

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 180.98  E-value: 7.60e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  30 LPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISIL 109
Cdd:MTH00029   11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 110 LSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSS 189
Cdd:MTH00029   91 LAWAIVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 190 TVDIVEAQSKYgffgWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLF 269
Cdd:MTH00029  171 ISEIVISQRSV----WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCM 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 270 VTVLYLGGWnfSIPYISFFGFFQMNKIIGILEMVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISLG 349
Cdd:MTH00029  247 MTIFFLGGW--LSPLDGIPTPPEAFSIFEQIASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLG 324

                  ....*
gi 1524083810 350 NLLLT 354
Cdd:MTH00029  325 LVILT 329
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
24-354 3.18e-53

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 178.63  E-value: 3.18e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  24 YGLIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSI 103
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 104 AVISILLSFLVIPLGYRFVLADLSigVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISL 183
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLS--LLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 184 LSNSSSTVDIVEAQSkygfFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNL 263
Cdd:MTH00040  160 FSGSFSLSSISNSQN----GSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANI 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 264 LVSSLFVTVLYLGGwnfSIPYISFFgffqmnkiigilemVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFL 343
Cdd:MTH00040  236 IFMNLLSVILFLGG---GSPFNEIF--------------PINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNY 298
                         330
                  ....*....|.
gi 1524083810 344 LPISLGNLLLT 354
Cdd:MTH00040  299 LPLSIGLLIFY 309
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
26-356 1.49e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 176.25  E-value: 1.49e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLgyRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:MTH00218   82 TLALLLWMPLPL--PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSS--TVDIVEAQSKYGFFGWNLwrqpigFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNL 263
Cdd:MTH00218  160 GGFSleGFNLTQETIWLLIPEWPL------ALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 264 LVSSLFVTVLYLGGWNFSIPYisffgffqmnkiigilemvigifitLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFL 343
Cdd:MTH00218  234 LFMNTLSVILFLGTSLTTINL-------------------------MLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNF 288
                         330
                  ....*....|...
gi 1524083810 344 LPISLGNLLLTTS 356
Cdd:MTH00218  289 LPLSLALLLLHTS 301
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
26-356 1.97e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 176.24  E-value: 1.97e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPLgyRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:MTH00111   85 LLALTIWTPLPM--PFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 N--SSSTVDIVEAQSKYGFFGWNLwrqpigFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNL 263
Cdd:MTH00111  163 GgyTLQTLATTQEPLWLIFSSWPL------AMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANI 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 264 LVSSLFVTVLYLGGWNFSIPYisffGFFQMNkiigilemvigifiTLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFL 343
Cdd:MTH00111  237 LLMNTLTTILFLNPSTLNLPP----ELFTIN--------------LMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQF 298
                         330
                  ....*....|...
gi 1524083810 344 LPISLGNLLLTTS 356
Cdd:MTH00111  299 LPLTLALCLWHTS 311
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
26-353 1.46e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 171.11  E-value: 1.46e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPsiaV 105
Cdd:MTH00193    2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSP---V 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLSFLVIPL-GYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLL 184
Cdd:MTH00193   79 FSLFLSLLIWLIyPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 185 SNSSSTVDIveaqSKYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLL 264
Cdd:MTH00193  159 IGSFNLLDF----MNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSIL 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 265 VSSLFVTVLYLGGWNFSIpyisFFGFFQMnkiigilemvigifitltkayLFLFISITIRWTLPRMRMDQLLNLGWKFLL 344
Cdd:MTH00193  235 FMSMLFVLMFLGGDLLSL----LFYLKLL---------------------FISFLFIWVRGTLPRFRYDKLMYLAWKSFL 289

                  ....*....
gi 1524083810 345 PISLGNLLL 353
Cdd:MTH00193  290 PLSLNYLLF 298
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
26-356 1.53e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 171.34  E-value: 1.53e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILalllgitIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:MTH00071   12 LLYIIPVL-------LAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMAL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLsfLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:MTH00071   85 TLALI--IWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 NSSSTVDIVEAQsKYGFFGWNLWrqPIGFLVFlISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV 265
Cdd:MTH00071  163 GGFSLMNFNTTQ-EFMWLIIPAW--PMAAMWF-ISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILM 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 266 SSLFVTVLYLGgwnfSIPYISFFGFFQMNKII--GILEMvigifitltkayLFLFisitIRWTLPRMRMDQLLNLGWKFL 343
Cdd:MTH00071  239 MNTLSTILFLG----STYNHLQPELSTMNLMIkaSILSM------------LFLW----VRASYPRFRYDQLMHLVWKNF 298
                         330
                  ....*....|...
gi 1524083810 344 LPISLGNLLLTTS 356
Cdd:MTH00071  299 LPITLAMTIFHIS 311
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
29-356 1.40e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 168.29  E-value: 1.40e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  29 ILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISI 108
Cdd:MTH00225    4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 109 LLSFLVIPlgYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSS 188
Cdd:MTH00225   84 LILWSLYP--SMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 189 STVDIVEAQSKYgffgWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSL 268
Cdd:MTH00225  162 NLFDFSYNQKYF----WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSM 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 269 FVTVLYLGGWNFSIPyisffgFFQMNKIIgilemvigifitltkayLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISL 348
Cdd:MTH00225  238 LTSILFFGGFFVTID------LFLILKIM-----------------LLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSL 294

                  ....*...
gi 1524083810 349 GNLLLTTS 356
Cdd:MTH00225  295 AYLFMVLI 302
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
32-356 9.05e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 161.33  E-value: 9.05e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  32 ILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAvISILLS 111
Cdd:MTH00104    6 ILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILA-LTLALT 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 112 fLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTV 191
Cdd:MTH00104   85 -MWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 192 DIVEAQSkygffgwNLW----RQPIGFLVFlISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSS 267
Cdd:MTH00104  164 TLITTQE-------HLWlifpSWPLAMMWF-ISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMN 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 268 LFVTVLYLGG-WNFSIPYIsffgfFQMNKIIGILEMVIgifitltkayLFLFisitIRWTLPRMRMDQLLNLGWKFLLPI 346
Cdd:MTH00104  236 ALTTILFLGAfHNPYMPEL-----YTTNFTIKTLLLTI----------LFLW----IRASYPRFRYDQLMHLLWKNFLPL 296
                         330
                  ....*....|
gi 1524083810 347 SLGNLLLTTS 356
Cdd:MTH00104  297 TLALCMWHIS 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
19-353 1.12e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 161.06  E-value: 1.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  19 LLKEIYGLIWILPILalllgitIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFS 98
Cdd:MTH00195    2 MISVIHFLIQIVPVL-------LAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFF 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  99 IGPSIAVISILLSFLVIPLGYRFVlaDLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCV 178
Cdd:MTH00195   75 FAPVLALALALILWVPIPSPFGFS--SINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLII 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 179 LAISLLSNSSSTVDIVEAQSKYgFFGWNLWrqPIGFlVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLV 258
Cdd:MTH00195  153 LCPICLAGSFDFTIMVISQGFS-WVILLCP--PISF-MWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMA 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 259 SYLNLLVSSLFVTVLYLGGWnfsipyisffgffqmnkiigilemviGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNL 338
Cdd:MTH00195  229 EYSNIIFMSVLTTILFLGGG--------------------------GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHL 282
                         330
                  ....*....|....*
gi 1524083810 339 GWKFLLPISLGNLLL 353
Cdd:MTH00195  283 TWKCYLPLILSLLIP 297
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
26-348 1.81e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 158.23  E-value: 1.81e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  26 LIWILPILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAV 105
Cdd:MTH00134    6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 106 ISILLsfLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLS 185
Cdd:MTH00134   86 TLALT--LWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFT 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 186 N--SSSTVDIVEAQSKYGFFGWNLwrqpigFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNL 263
Cdd:MTH00134  164 GgfTLQTFNTAQESIWLLLPAWPL------AAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANI 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 264 LVSSLFVTVLYLGGWNF-SIPYISFFGFfqmnkiigilemvigifitLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKF 342
Cdd:MTH00134  238 LLMNTLSAILFLGASHIpTLPELTTINL-------------------MTKAALLSVVFLWVRASYPRFRYDQLMHLVWKN 298

                  ....*.
gi 1524083810 343 LLPISL 348
Cdd:MTH00134  299 FLPLTL 304
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
32-362 1.10e-43

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 153.40  E-value: 1.10e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  32 ILALLLGITIEVLVIVW---LEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISI 108
Cdd:MTH00010    6 FISILLSYVMALLAMAFytlLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 109 LLSFLVIPLGYRFVLadLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSS 188
Cdd:MTH00010   86 LLLWSLYPHKHPSFF--LKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTF 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 189 STVDIVEAQSKygffgWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSL 268
Cdd:MTH00010  164 SFSKIIMSQYS-----WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSL 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 269 FVTVLYLGgwnfSIPYISffgffqmnkiigILEMVIgIFITLTKAYLFLFisitIRWTLPRMRMDQLLNLGWKFLLPISL 348
Cdd:MTH00010  239 FTSVFFTS----FIPSIF------------ISDLML-ILKTVFLAFLFIW----IRATFPRMRYDRLMNLTWKSFLPMSL 297
                         330
                  ....*....|....
gi 1524083810 349 GNLLLTTSSQLVSL 362
Cdd:MTH00010  298 TSLMISIPIMFLLL 311
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
28-353 5.77e-35

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 129.92  E-value: 5.77e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  28 WILPILALLLGITIEVLVIVWLeREISASIQQRIGPeyagplGLLQAIADGTKLLLKEDILPsRGEIPLFSIGPSIAVIS 107
Cdd:COG0650     4 ILLALLQLLLALLLAPLLLGII-RKVKARLQGRRGP------PILQPYYDLLKLLRKETVVP-ETASWLFRAAPYVALAA 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 108 ILLSFLVIPLGYRFVLADLSIGVFLWIAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNS 187
Cdd:COG0650    76 MLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGS 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 188 SSTVDIVEAQSKYGFFGWNLWRqPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLV-S 266
Cdd:COG0650   156 TSLSDIVAYQAAHGPLLLSPSL-LLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVlL 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 267 SLFVTVlylggwnfsipyisFFGFFQMnkiigiLEMVIGIFITLTKAYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPI 346
Cdd:COG0650   235 SLFVNL--------------FLPWGIA------LTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLA 294

                  ....*..
gi 1524083810 347 SLGNLLL 353
Cdd:COG0650   295 LLALLLA 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
32-348 4.21e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 126.94  E-value: 4.21e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  32 ILALLLGITIEVLVIVWLEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDILPSRGEIPLFSIGPSIAVISILLS 111
Cdd:MTH00090    2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 112 FLVIPLGYRFVLADLSIGVFLWIAISSIAPIglLMAGYSSNNKYSFSGGLRAAAQSISYEIPLTFCVLAISLLSNSSSTV 191
Cdd:MTH00090   82 WFVLPYFFDFLSFEYSLLFFLCLIGFSVYTT--LISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 192 diveaqskygfFGWNLWrQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGLFYLVSYLNLLVSSLFVT 271
Cdd:MTH00090  160 -----------SSFSLS-LFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTS 227
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1524083810 272 VLYLGgwnfsipyISFFGFfqmnkiigilemvigifitltkaYLFLFISITIRWTLPRMRMDQLLNLGWKFLLPISL 348
Cdd:MTH00090  228 VLFFK--------FSFLML-----------------------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
18-348 1.09e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 110.01  E-value: 1.09e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  18 ELLKEIYGLIWILPILAL-LLGitievlvivwlEREISASIQQRIGPEYAGPLGLLQAIADGTKLLLKEDI--LPSRGEI 94
Cdd:MTH00058    3 GLVSGLEGLLIILLLVAFfILG-----------ERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVygFQSRSWF 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810  95 PLFsiGPSIAVISILLSFLVIPLGYRFVLADLSIGVFLwiAISSIAPIGLLMAGYSSNNKYSFSGGLRAAAQSISYEIPL 174
Cdd:MTH00058   72 SLF--GVFLLVLLVVFYCFIYGSYYSGSYSSLSLLWFL--VVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACF 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 175 TFCVLAISLLSNSSSTVDIveaqskYGFFGWNLWRQPIGFLVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKYGL 254
Cdd:MTH00058  148 MCIVIFCGLCYGSYSLVDF------YYSGWLSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTC 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524083810 255 FYLVSYLNLLVSSLFVTVLYLGGwnfsipyisffgffqmnkiigilemviGIFITLTKAYLFLFisITIRWTLPRMRMDQ 334
Cdd:MTH00058  222 LFACEYLIIFIFSWLGSVLFFGG---------------------------GFVSIMLLFHLLFF--MWARATLPRVRYDY 272
                         330
                  ....*....|....
gi 1524083810 335 LLNLGWKFLLPISL 348
Cdd:MTH00058  273 FVNFFWEYCLVLLI 286
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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