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Conserved domains on  [gi|15224587|ref|NP_180649|]
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coenzyme Q 3 [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02396 PLN02396
hexaprenyldihydroxybenzoate methyltransferase
 1-322 0e+00

hexaprenyldihydroxybenzoate methyltransferase


:

Pssm-ID: 178018 [Multi-domain]  Cd Length: 322  Bit Score: 651.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587    1 MLASVRVNQLQRLLLSARRLSSSPIIPPSRLLHQRLFSTSDTDASAASFSSSHPKIQTLEGKASNKSRSTSSTTSLNEDE 80
Cdd:PLN02396   1 MLASLLSNQLQRLLLSARRLSSSRIIPPSRLLHQRLFSTSDTDDSAASFSSSHPKMQTLEGKASNKSRSTSTTTSLNEDE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160
Cdd:PLN02396  81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240
Cdd:PLN02396 161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320
Cdd:PLN02396 241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQRASVDVKEMAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320


                 ..
gi 15224587  321 DI 322
Cdd:PLN02396 321 DI 322
 
Name Accession Description Interval E-value
PLN02396 PLN02396
hexaprenyldihydroxybenzoate methyltransferase
 1-322 0e+00

hexaprenyldihydroxybenzoate methyltransferase


Pssm-ID: 178018 [Multi-domain]  Cd Length: 322  Bit Score: 651.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587    1 MLASVRVNQLQRLLLSARRLSSSPIIPPSRLLHQRLFSTSDTDASAASFSSSHPKIQTLEGKASNKSRSTSSTTSLNEDE 80
Cdd:PLN02396   1 MLASLLSNQLQRLLLSARRLSSSRIIPPSRLLHQRLFSTSDTDDSAASFSSSHPKMQTLEGKASNKSRSTSTTTSLNEDE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160
Cdd:PLN02396  81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240
Cdd:PLN02396 161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320
Cdd:PLN02396 241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQRASVDVKEMAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320


                 ..
gi 15224587  321 DI 322
Cdd:PLN02396 321 DI 322
UbiG TIGR01983
ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase ...
 80-310 1.01e-132

ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273910  Cd Length: 224  Bit Score: 376.25  E-value: 1.01e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587    80 ELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKdpssakPFEGLKFIDIGCGGGLLSEPLARMGATVTGV 159
Cdd:TIGR01983   1 EIAKFSALAHEWWDPNGKFKPLHKMNPLRLDYIRDRIRKNFKN------PLDGLRVLDVGCGGGLLSEPLARLGANVTGI 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   160 DAVDKNVKIARLHADMDPVTstIEYLCTTAEKLADEGRK-FDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINR 238
Cdd:TIGR01983  75 DASEENIEVAKLHAKKDPLQ--IDYRCTTVEDLAEKKAGsFDVVTCMEVLEHVPDPQAFIRACAQLLKPGGILFFSTINR 152

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15224587   239 TMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYI 310
Cdd:TIGR01983 153 TPKSYLLAIVGAEYILRIVPKGTHDWEKFIKPSELLSWLESAGLRVKDIKGLVYNPIKNTWKLSKDTDVNYM 224
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 131-237 1.83e-30

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 111.65  E-value: 1.83e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 131 EGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADmdpvTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEH 210
Cdd:COG2227  24 AGGRVLDVGCGTGRLALALARRGADVTGVDISPEALEIARERAA----ELNVDFVQGDLEDLPLEDGSFDLVICSEVLEH 99

                        90       100
                ....*....|....*....|....*..
gi 15224587 211 VANPAEFCKSLSALTIPNGATVLSTIN 237
Cdd:COG2227 100 LPDPAALLRELARLLKPGGLLLLSTPN 126
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 136-229 8.32e-20

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 82.33  E-value: 8.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   136 IDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTstieYLCTTAEKL--ADEgrKFDAVLSLEVIEHVAN 213
Cdd:pfam08241   1 LDVGCGTGLLTELLARLGARVTGVDISPEMLELAREKAPREGLT----FVVGDAEDLpfPDN--SFDLVLSSEVLHHVED 74

                          90
                  ....*....|....*.
gi 15224587   214 PAEFCKSLSALTIPNG 229
Cdd:pfam08241  75 PERALREIARVLKPGG 90
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 134-234 2.63e-07

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 48.20  E-value: 2.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 134 KFIDIGCGGGLLSEPLAR-MGATVTGVDAVDKNVKIARLHADMdPVTSTIEYLCTTAEKLA-DEGRKFDAVLSLEVIEH- 210
Cdd:cd02440   1 RVLDLGCGTGALALALASgPGARVTGVDISPVALELARKAAAA-LLADNVEVLKGDAEELPpEADESFDVIISDPPLHHl 79

                        90       100
                ....*....|....*....|....
gi 15224587 211 VANPAEFCKSLSALTIPNGATVLS 234
Cdd:cd02440  80 VEDLARFLEEARRLLKPGGVLVLT 103
 
Name Accession Description Interval E-value
PLN02396 PLN02396
hexaprenyldihydroxybenzoate methyltransferase
 1-322 0e+00

hexaprenyldihydroxybenzoate methyltransferase


Pssm-ID: 178018 [Multi-domain]  Cd Length: 322  Bit Score: 651.41  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587    1 MLASVRVNQLQRLLLSARRLSSSPIIPPSRLLHQRLFSTSDTDASAASFSSSHPKIQTLEGKASNKSRSTSSTTSLNEDE 80
Cdd:PLN02396   1 MLASLLSNQLQRLLLSARRLSSSRIIPPSRLLHQRLFSTSDTDDSAASFSSSHPKMQTLEGKASNKSRSTSTTTSLNEDE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160
Cdd:PLN02396  81 LAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240
Cdd:PLN02396 161 AVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320
Cdd:PLN02396 241 RAYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQRASVDVKEMAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLG 320


                 ..
gi 15224587  321 DI 322
Cdd:PLN02396 321 DI 322
UbiG TIGR01983
ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase ...
 80-310 1.01e-132

ubiquinone biosynthesis O-methyltransferase; This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273910  Cd Length: 224  Bit Score: 376.25  E-value: 1.01e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587    80 ELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKdpssakPFEGLKFIDIGCGGGLLSEPLARMGATVTGV 159
Cdd:TIGR01983   1 EIAKFSALAHEWWDPNGKFKPLHKMNPLRLDYIRDRIRKNFKN------PLDGLRVLDVGCGGGLLSEPLARLGANVTGI 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   160 DAVDKNVKIARLHADMDPVTstIEYLCTTAEKLADEGRK-FDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINR 238
Cdd:TIGR01983  75 DASEENIEVAKLHAKKDPLQ--IDYRCTTVEDLAEKKAGsFDVVTCMEVLEHVPDPQAFIRACAQLLKPGGILFFSTINR 152

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15224587   239 TMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYI 310
Cdd:TIGR01983 153 TPKSYLLAIVGAEYILRIVPKGTHDWEKFIKPSELLSWLESAGLRVKDIKGLVYNPIKNTWKLSKDTDVNYM 224
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 131-237 1.83e-30

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 111.65  E-value: 1.83e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 131 EGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADmdpvTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEH 210
Cdd:COG2227  24 AGGRVLDVGCGTGRLALALARRGADVTGVDISPEALEIARERAA----ELNVDFVQGDLEDLPLEDGSFDLVICSEVLEH 99

                        90       100
                ....*....|....*....|....*..
gi 15224587 211 VANPAEFCKSLSALTIPNGATVLSTIN 237
Cdd:COG2227 100 LPDPAALLRELARLLKPGGLLLLSTPN 126
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 136-229 8.32e-20

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 82.33  E-value: 8.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   136 IDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTstieYLCTTAEKL--ADEgrKFDAVLSLEVIEHVAN 213
Cdd:pfam08241   1 LDVGCGTGLLTELLARLGARVTGVDISPEMLELAREKAPREGLT----FVVGDAEDLpfPDN--SFDLVLSSEVLHHVED 74

                          90
                  ....*....|....*.
gi 15224587   214 PAEFCKSLSALTIPNG 229
Cdd:pfam08241  75 PERALREIARVLKPGG 90
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 126-280 5.47e-18

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 79.78  E-value: 5.47e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   126 SAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPvtstieylcTTAEKLADEGRKFDAVLSL 205
Cdd:pfam13489  17 LPKLPSPGRVLDFGCGTGIFLRLLRAQGFSVTGVDPSPIAIERALLNVRFDQ---------FDEQEAAVPAGKFDVIVAR 87

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15224587   206 EVIEHVANPAEFCKSLSALTIPNGATVLSTINRTMRAyastivgAEYILRW---LPKGTHqwSSFVTPEEMSMILQRA 280
Cdd:pfam13489  88 EVLEHVPDPPALLRQIAALLKPGGLLLLSTPLASDEA-------DRLLLEWpylRPRNGH--ISLFSARSLKRLLEEA 156
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 131-238 5.35e-17

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 76.57  E-value: 5.35e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 131 EGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVtsTIEYLCTTAEKLADEGRKFDAVLSLEVIEH 210
Cdd:COG2226  22 PGARVLDLGCGTGRLALALAERGARVTGVDISPEMLELARERAAEAGL--NVEFVVGDAEDLPFPDGSFDLVISSFVLHH 99

                        90       100
                ....*....|....*....|....*...
gi 15224587 211 VANPAEFCKSLSALTIPNGATVLSTINR 238
Cdd:COG2226 100 LPDPERALAEIARVLKPGGRLVVVDFSP 127
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 137-214 2.40e-16

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 72.98  E-value: 2.40e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15224587   137 DIGCGGGLLSEPLARM-GATVTGVDAVDKNVKIARLHADMDPVTstIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANP 214
Cdd:pfam13649   3 DLGCGTGRLTLALARRgGARVTGVDLSPEMLERARERAAEAGLN--VEFVQGDAEDLPFPDGSFDLVVSSGVLHHLPDP 79
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
136-229 1.16e-13

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 68.10  E-value: 1.16e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 136 IDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADmdpvtsTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPA 215
Cdd:COG4976  51 LDLGCGTGLLGEALRPRGYRLTGVDLSEEMLAKAREKGV------YDRLLVADLADLAEPDGRFDLIVAADVLTYLGDLA 124

                        90
                ....*....|....
gi 15224587 216 EFCKSLSALTIPNG 229
Cdd:COG4976 125 AVFAGVARALKPGG 138
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 132-235 7.10e-13

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 65.34  E-value: 7.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 132 GLKFIDIGCGGGLLSEPLARM-GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRkFDAVLSLEVIEH 210
Cdd:COG2230  52 GMRVLDIGCGWGGLALYLARRyGVRVTGVTLSPEQLEYARERAAEAGLADRVEVRLADYRDLPADGQ-FDAIVSIGMFEH 130

                        90       100
                ....*....|....*....|....*..
gi 15224587 211 V--ANPAEFCKSLSALTIPNGATVLST 235
Cdd:COG2230 131 VgpENYPAYFAKVARLLKPGGRLLLHT 157
PRK07580 PRK07580
Mg-protoporphyrin IX methyl transferase; Validated
 132-225 2.84e-11

Mg-protoporphyrin IX methyl transferase; Validated


Pssm-ID: 236059 [Multi-domain]  Cd Length: 230  Bit Score: 62.16  E-value: 2.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  132 GLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLAdeGRkFDAVLSLEVIEHV 211
Cdd:PRK07580  64 GLRILDAGCGVGSLSIPLARRGAKVVASDISPQMVEEARERAPEAGLAGNITFEVGDLESLL--GR-FDTVVCLDVLIHY 140

                         90
                 ....*....|....*.
gi 15224587  212 ANP--AEFCKSLSALT 225
Cdd:PRK07580 141 PQEdaARMLAHLASLT 156
PRK08317 PRK08317
hypothetical protein; Provisional
 129-234 4.56e-11

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 61.88  E-value: 4.56e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  129 PFEGLKFIDIGCGGGLLSEPLA-RMGAT--VTGVDAVDKNVKIARLHADMDpvTSTIEYLCTTAEKLADEGRKFDAVLSL 205
Cdd:PRK08317  17 VQPGDRVLDVGCGPGNDARELArRVGPEgrVVGIDRSEAMLALAKERAAGL--GPNVEFVRGDADGLPFPDGSFDAVRSD 94

                         90       100
                 ....*....|....*....|....*....
gi 15224587  206 EVIEHVANPAEFCKSLSALTIPNGATVLS 234
Cdd:PRK08317  95 RVLQHLEDPARALAEIARVLRPGGRVVVL 123
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
131-235 3.43e-10

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 56.37  E-value: 3.43e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 131 EGLKFIDIGCGGGLLSEPLARM--GATVTGVDAVDKNVKIARLHAdmdpvtSTIEYLCTTAEKLaDEGRKFDAVLSLEVI 208
Cdd:COG4106   1 PPRRVLDLGCGTGRLTALLAERfpGARVTGVDLSPEMLARARARL------PNVRFVVADLRDL-DPPEPFDLVVSNAAL 73

                        90       100
                ....*....|....*....|....*..
gi 15224587 209 EHVANPAEFCKSLSALTIPNGATVLST 235
Cdd:COG4106  74 HWLPDHAALLARLAAALAPGGVLAVQV 100
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 136-229 6.53e-09

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 52.76  E-value: 6.53e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   136 IDIGCGGGLLSEPLARM--GATVTGVDAVDKNVKIA--RLHADMDPVTSTIEYLCTTAEKLadEGRKFDAVLSLEVIEHV 211
Cdd:pfam08242   1 LEIGCGTGTLLRALLEAlpGLEYTGLDISPAALEAAreRLAALGLLNAVRVELFQLDLGEL--DPGSFDVVVASNVLHHL 78

                          90
                  ....*....|....*...
gi 15224587   212 ANPAEFCKSLSALTIPNG 229
Cdd:pfam08242  79 ADPRAVLRNIRRLLKPGG 96
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 131-234 1.08e-08

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 54.15  E-value: 1.08e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 131 EGLKFIDIGCGGGLLSEPLA-RMGATVTGVDAVDKNVKIARLHADMDPVtSTIEYLCTTAEKLAD-EGRKFDAVLSLEVI 208
Cdd:COG0500  26 KGGRVLDLGCGTGRNLLALAaRFGGRVIGIDLSPEAIALARARAAKAGL-GNVEFLVADLAELDPlPAESFDLVVAFGVL 104

                        90       100
                ....*....|....*....|....*...
gi 15224587 209 EHV--ANPAEFCKSLSALTIPNGATVLS 234
Cdd:COG0500 105 HHLppEEREALLRELARALKPGGVLLLS 132
PRK06202 PRK06202
hypothetical protein; Provisional
 137-279 2.23e-08

hypothetical protein; Provisional


Pssm-ID: 180466 [Multi-domain]  Cd Length: 232  Bit Score: 53.85  E-value: 2.23e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  137 DIGCGGGLLSEPLARMGA------TVTGVDAVDKNVKIARLHADMDPVTstieYLCTTAEKLADEGRKFDAVLSLEVIEH 210
Cdd:PRK06202  66 DIGCGGGDLAIDLARWARrdglrlEVTAIDPDPRAVAFARANPRRPGVT----FRQAVSDELVAEGERFDVVTSNHFLHH 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  211 VANP--AEFCKSLSALTipNGATVLSTINRTMRAYASTIVGAeyilRWLPKGthqwsSFV------------TPEEMSMI 276
Cdd:PRK06202 142 LDDAevVRLLADSAALA--RRLVLHNDLIRSRLAYALFWAGT----RLLSRS-----SFVhtdgllsvrrsyTPAELAAL 210


                 ...
gi 15224587  277 LQR 279
Cdd:PRK06202 211 APQ 213
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 134-234 2.63e-07

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 48.20  E-value: 2.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 134 KFIDIGCGGGLLSEPLAR-MGATVTGVDAVDKNVKIARLHADMdPVTSTIEYLCTTAEKLA-DEGRKFDAVLSLEVIEH- 210
Cdd:cd02440   1 RVLDLGCGTGALALALASgPGARVTGVDISPVALELARKAAAA-LLADNVEVLKGDAEELPpEADESFDVIISDPPLHHl 79

                        90       100
                ....*....|....*....|....
gi 15224587 211 VANPAEFCKSLSALTIPNGATVLS 234
Cdd:cd02440  80 VEDLARFLEEARRLLKPGGVLVLT 103
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 131-237 1.85e-06

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 47.03  E-value: 1.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   131 EGLKFIDIGCGGGLLSEPLA---RMGATVTGVDAVDKNVKIARLHAD---MDPVTSTIEYLctTAEKLADEGRKFDAVLS 204
Cdd:pfam13847   3 KGMRVLDLGCGTGHLSFELAeelGPNAEVVGIDISEEAIEKARENAQklgFDNVEFEQGDI--EELPELLEDDKFDVVIS 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 15224587   205 LEVIEHVANPAEFCKSLSALTIPNGATVLSTIN 237
Cdd:pfam13847  81 NCVLNHIPDPDKVLQEILRVLKPGGRLIISDPD 113
PRK14968 PRK14968
putative methyltransferase; Provisional
 131-203 2.84e-04

putative methyltransferase; Provisional


Pssm-ID: 237872 [Multi-domain]  Cd Length: 188  Bit Score: 41.04  E-value: 2.84e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15224587  131 EGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTST-IE-YLCTTAEKLAdeGRKFDAVL 203
Cdd:PRK14968  23 KGDRVLEVGTGSGIVAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNgVEvIRSDLFEPFR--GDKFDVIL 95
TrmA COG2265
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure ...
 127-212 4.97e-04

tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 441866 [Multi-domain]  Cd Length: 377  Bit Score: 41.32  E-value: 4.97e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587 127 AKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTStIEYLCTTAEKLADE---GRKFDAV- 202
Cdd:COG2265 229 LDLTGGERVLDLYCGVGTFALPLARRAKKVIGVEIVPEAVEDARENARLNGLKN-VEFVAGDLEEVLPEllwGGRPDVVv 307

                        90
                ....*....|....*..
gi 15224587 203 -------LSLEVIEHVA 212
Cdd:COG2265 308 ldppragAGPEVLEALA 324
CMAS pfam02353
Mycolic acid cyclopropane synthetase; This family consist of ...
 131-236 5.74e-04

Mycolic acid cyclopropane synthetase; This family consist of Cyclopropane-fatty-acyl-phospholipid synthase or CFA synthase EC:2.1.1.79 this enzyme catalyze the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid <=> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.


Pssm-ID: 396777 [Multi-domain]  Cd Length: 272  Bit Score: 40.77  E-value: 5.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   131 EGLKFIDIGCG-GGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEgrkFDAVLSLEVIE 209
Cdd:pfam02353  61 PGMTLLDIGCGwGGLMRRAAERYDVNVVGLTLSKNQYKLARKRVAAEGLARKVEVLLQDYRDFDEP---FDRIVSVGMFE 137

                          90       100
                  ....*....|....*....|....*....
gi 15224587   210 HV--ANPAEFCKSLSALTIPNGATVLSTI 236
Cdd:pfam02353 138 HVghENYDTFFKKLYNLLPPGGLMLLHTI 166
PLN02585 PLN02585
magnesium protoporphyrin IX methyltransferase
 129-210 8.01e-04

magnesium protoporphyrin IX methyltransferase


Pssm-ID: 215319 [Multi-domain]  Cd Length: 315  Bit Score: 40.61  E-value: 8.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  129 PFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIAR------LHADMDPVTSTIEylcttAEKLADEGRKFDAV 202
Cdd:PLN02585 142 SLAGVTVCDAGCGTGSLAIPLALEGAIVSASDISAAMVAEAErrakeaLAALPPEVLPKFE-----ANDLESLSGKYDTV 216


                 ....*...
gi 15224587  203 LSLEVIEH 210
Cdd:PLN02585 217 TCLDVLIH 224
COG2263 COG2263
Predicted RNA methylase [General function prediction only];
130-204 9.02e-04

Predicted RNA methylase [General function prediction only];


Pssm-ID: 441864 [Multi-domain]  Cd Length: 199  Bit Score: 39.89  E-value: 9.02e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15224587 130 FEGLKFIDIGCGGGLLSEPLARMGAT-VTGVDAVDKNVKIARLHADMdpVTSTIEYLCTTAEKLADEGRkFDAVLS 204
Cdd:COG2263  44 IEGKTVLDLGCGTGMLAIGAALLGAKkVVGVDIDPEALEIARENAER--LGVRVDFIRADVTRIPLGGS-VDTVVM 116
PrmA pfam06325
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal ...
 131-236 9.91e-04

Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.


Pssm-ID: 428888 [Multi-domain]  Cd Length: 294  Bit Score: 40.33  E-value: 9.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   131 EGLKFIDIGCGGGLLSEPLARMGAT-VTGVDAVDKNVKIARLHADMDPVTSTIEYlcttaeKLADEG--RKFDAVLS--- 204
Cdd:pfam06325 161 PGESVLDVGCGSGILAIAALKLGAKkVVGVDIDPVAVRAAKENAELNGVEARLEV------YLPGDLpkEKADVVVAnil 234

                          90       100       110
                  ....*....|....*....|....*....|..
gi 15224587   205 LEVIEHVAnpaefcKSLSALTIPNGATVLSTI 236
Cdd:pfam06325 235 ADPLIELA------PDIYALVKPGGYLILSGI 260
Ubie_methyltran pfam01209
ubiE/COQ5 methyltransferase family;
103-202 2.12e-03

ubiE/COQ5 methyltransferase family;


Pssm-ID: 395966 [Multi-domain]  Cd Length: 228  Bit Score: 38.96  E-value: 2.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587   103 QMNPTrLAFIRSTLCRHFSKDPSSAKPfeGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKN---VKIARLHAdMDPVT 179
Cdd:pfam01209  17 LMNDV-ISFGIHRLWKDFTMKCMGVKR--GNKFLDVAGGTGDWTFGLSDSAGSSGKVVGLDINenmLKEGEKKA-KEEGK 92

                          90       100
                  ....*....|....*....|...
gi 15224587   180 STIEYLCTTAEKLADEGRKFDAV 202
Cdd:pfam01209  93 YNIEFLQGNAEELPFEDDSFDIV 115
PLN02244 PLN02244
tocopherol O-methyltransferase
 134-235 6.08e-03

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 37.80  E-value: 6.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15224587  134 KFIDIGCGGGLLSEPLARM-GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVA 212
Cdd:PLN02244 121 RIVDVGCGIGGSSRYLARKyGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMESGEHMP 200

                         90       100
                 ....*....|....*....|...
gi 15224587  213 NPAEFCKSLSALTIPNGATVLST 235
Cdd:PLN02244 201 DKRKFVQELARVAAPGGRIIIVT 223
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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