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Conserved domains on  [gi|151946257|gb|EDN64488|]
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cis-prenyltransferase [Saccharomyces cerevisiae YJM789]

Protein Classification

undecaprenyl diphosphate synthase family protein( domain architecture ID 10794436)

undecaprenyl diphosphate synthase (UPPS) family protein catalyzes consecutive condensation reactions of farnesyl diphosphate (FPP) with specific numbers of isopentenyl diphosphate (IPP) to form long-chain polyprenyl diphosphates, similar to UPPS that catalyzes chain elongation of FPP by eight IPP to form the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
uppS TIGR00055
undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule ...
 68-292 3.15e-116

undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule that in bacteria is used a carrier in synthesizing cell wall components. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


:

Pssm-ID: 129165  Cd Length: 226  Bit Score: 335.53  E-value: 3.15e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257   68 EHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDefak 147
Cdd:TIGR00055   1 RHVAIIMDGNGRWAKKKGKPRAYGHKAGVKSLRRILRWCANLGVECLTLYAFSTENWKRPKEEVDFLMELFEKKLD---- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  148 RAKDYKDPlYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIR 227
Cdd:TIGR00055  77 REVKELHR-YNVRIRIIGDLSLLSKELQEKIKKAEEDTKNNTDFTLNIAFNYGGRNEILHAVKQIAEKVKSGKLLPEDID 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 151946257  228 KFTNKMYMG-FHSNKCELLIRTSGHRRLSDYMLWQVHEnATIEFSDTLWPNFSFFAMYLMILKWSF 292
Cdd:TIGR00055 156 EETLNKHLYtANLPPVDLLIRTSGEMRISNFLLWQSSY-AELYFTDILWPDFDPQDFELAILDFQF 220
 
Name Accession Description Interval E-value
uppS TIGR00055
undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule ...
 68-292 3.15e-116

undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule that in bacteria is used a carrier in synthesizing cell wall components. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129165  Cd Length: 226  Bit Score: 335.53  E-value: 3.15e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257   68 EHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDefak 147
Cdd:TIGR00055   1 RHVAIIMDGNGRWAKKKGKPRAYGHKAGVKSLRRILRWCANLGVECLTLYAFSTENWKRPKEEVDFLMELFEKKLD---- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  148 RAKDYKDPlYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIR 227
Cdd:TIGR00055  77 REVKELHR-YNVRIRIIGDLSLLSKELQEKIKKAEEDTKNNTDFTLNIAFNYGGRNEILHAVKQIAEKVKSGKLLPEDID 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 151946257  228 KFTNKMYMG-FHSNKCELLIRTSGHRRLSDYMLWQVHEnATIEFSDTLWPNFSFFAMYLMILKWSF 292
Cdd:TIGR00055 156 EETLNKHLYtANLPPVDLLIRTSGEMRISNFLLWQSSY-AELYFTDILWPDFDPQDFELAILDFQF 220
Cis_IPPS cd00475
Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) ...
 69-291 8.72e-82

Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.


Pssm-ID: 259850  Cd Length: 219  Bit Score: 247.67  E-value: 8.72e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  69 HVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDEFAKR 148
Cdd:cd00475    1 HVAIIMDGNRRWAKKRGLPRTEGHRAGAEALREILEWCLELGIKYLTLYAFSTENWKRPKEEVDALMKLLREYLEKELEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 149 AKDykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSP--RINI 226
Cdd:cd00475   81 LHK-----NGVRLRVIGDLSLLPEDLREAIEEAEEATKNNTGLTLNIALNYGGRDEIVRAVRKIARDVKAGELDpeDITE 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 151946257 227 RKFTNKMYMGfHSNKCELLIRTSGHRRLSDYMLWQVHEnATIEFSDTLWPNFSFFAMYLMILKWS 291
Cdd:cd00475  156 ELISKHLYTA-DLPDPDLLIRTSGEQRLSNFLLWQSAY-AELYFTDVLWPDFRKEDLLRAILDYQ 218
Prenyltransf pfam01255
Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family ...
 73-291 2.49e-81

Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.


Pssm-ID: 460138  Cd Length: 220  Bit Score: 246.51  E-value: 2.49e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257   73 IMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLF-TVKLDEFAKRAKD 151
Cdd:pfam01255   1 IMDGNRRWAKKRGLPREAGHRAGAEALREVLEWCLELGIKYLTLYAFSTENWKRPKEEVDALMELLkEEYLRRELPELHK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  152 ykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTN 231
Cdd:pfam01255  81 -----NGVRVRVIGDLSLLPEDLQEAIEEAEEATKNNTGLTLNIALNYGGRDEIVDAVRKIVKEGKKLDPEDIDEELISS 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  232 KMYMGFHSNkCELLIRTSGHRRLSDYMLWQVHeNATIEFSDTLWPNFSFFAMYLMILKWS 291
Cdd:pfam01255 156 HLYTAGLPD-PDLLIRTSGEQRLSNFLLWQSA-YSELYFTDVLWPDFRKEDLLRAIRDYQ 213
UppS COG0020
Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];
55-279 1.24e-62

Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];


Pssm-ID: 439791  Cd Length: 248  Bit Score: 199.51  E-value: 1.24e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  55 NILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTL 134
Cdd:COG0020    4 RALLPEIDPGNLPRHVAIIMDGNGRWAKKRGLPRIEGHRAGVEAVREVVEACAELGIKYLTLYAFSTENWKRPKEEVSFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 135 MNLFTVKLDEFAKRAKDykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVE 214
Cdd:COG0020   84 MGLLREYLRRELDELHK-----NNVRVRVIGDRSRLPESLQEAIEEAEELTKNNTGLTLNIALNYGGRWEIVDAVRKIAR 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 151946257 215 DHLENK-SP-RINIRKFTNKMYMGFHSNkCELLIRTSGHRRLSDYMLWQV--HEnatIEFSDTLWPNFS 279
Cdd:COG0020  159 DVAAGElDPeDIDEETISRYLYTADLPD-PDLLIRTSGEQRISNFLLWQLayAE---LYFTDVLWPDFD 223
PRK14836 PRK14836
undecaprenyl pyrophosphate synthase; Provisional
 66-279 3.76e-45

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237831  Cd Length: 253  Bit Score: 154.84  E-value: 3.76e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLD-E 144
Cdd:PRK14836  14 IPRHIAIIMDGNGRWAKRRGKPRVEGHRAGVRAVRRTIEFCLEKGIEMLTLFAFSSENWLRPADEVSALMELFLKALDrE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 145 FAKRAKDykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENK-SP- 222
Cdd:PRK14836  94 VDKLHRN------GIRVRFIGDRSRLSPKLQERMEYAERLTASNTRLILSLAVSYGGRWDIVTAARALAREVAAGKlAPd 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 151946257 223 RINIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQVhenATIE--FSDTLWPNFS 279
Cdd:PRK14836 168 EIDEALLAQHLALADLPEP-DLFIRTSGELRISNFLLWQL---AYTElyFTDTLWPDFD 222
 
Name Accession Description Interval E-value
uppS TIGR00055
undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule ...
 68-292 3.15e-116

undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule that in bacteria is used a carrier in synthesizing cell wall components. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129165  Cd Length: 226  Bit Score: 335.53  E-value: 3.15e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257   68 EHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDefak 147
Cdd:TIGR00055   1 RHVAIIMDGNGRWAKKKGKPRAYGHKAGVKSLRRILRWCANLGVECLTLYAFSTENWKRPKEEVDFLMELFEKKLD---- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  148 RAKDYKDPlYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIR 227
Cdd:TIGR00055  77 REVKELHR-YNVRIRIIGDLSLLSKELQEKIKKAEEDTKNNTDFTLNIAFNYGGRNEILHAVKQIAEKVKSGKLLPEDID 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 151946257  228 KFTNKMYMG-FHSNKCELLIRTSGHRRLSDYMLWQVHEnATIEFSDTLWPNFSFFAMYLMILKWSF 292
Cdd:TIGR00055 156 EETLNKHLYtANLPPVDLLIRTSGEMRISNFLLWQSSY-AELYFTDILWPDFDPQDFELAILDFQF 220
Cis_IPPS cd00475
Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) ...
 69-291 8.72e-82

Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.


Pssm-ID: 259850  Cd Length: 219  Bit Score: 247.67  E-value: 8.72e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  69 HVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDEFAKR 148
Cdd:cd00475    1 HVAIIMDGNRRWAKKRGLPRTEGHRAGAEALREILEWCLELGIKYLTLYAFSTENWKRPKEEVDALMKLLREYLEKELEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 149 AKDykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSP--RINI 226
Cdd:cd00475   81 LHK-----NGVRLRVIGDLSLLPEDLREAIEEAEEATKNNTGLTLNIALNYGGRDEIVRAVRKIARDVKAGELDpeDITE 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 151946257 227 RKFTNKMYMGfHSNKCELLIRTSGHRRLSDYMLWQVHEnATIEFSDTLWPNFSFFAMYLMILKWS 291
Cdd:cd00475  156 ELISKHLYTA-DLPDPDLLIRTSGEQRLSNFLLWQSAY-AELYFTDVLWPDFRKEDLLRAILDYQ 218
Prenyltransf pfam01255
Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family ...
 73-291 2.49e-81

Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.


Pssm-ID: 460138  Cd Length: 220  Bit Score: 246.51  E-value: 2.49e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257   73 IMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLF-TVKLDEFAKRAKD 151
Cdd:pfam01255   1 IMDGNRRWAKKRGLPREAGHRAGAEALREVLEWCLELGIKYLTLYAFSTENWKRPKEEVDALMELLkEEYLRRELPELHK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  152 ykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTN 231
Cdd:pfam01255  81 -----NGVRVRVIGDLSLLPEDLQEAIEEAEEATKNNTGLTLNIALNYGGRDEIVDAVRKIVKEGKKLDPEDIDEELISS 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  232 KMYMGFHSNkCELLIRTSGHRRLSDYMLWQVHeNATIEFSDTLWPNFSFFAMYLMILKWS 291
Cdd:pfam01255 156 HLYTAGLPD-PDLLIRTSGEQRLSNFLLWQSA-YSELYFTDVLWPDFRKEDLLRAIRDYQ 213
UppS COG0020
Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];
55-279 1.24e-62

Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];


Pssm-ID: 439791  Cd Length: 248  Bit Score: 199.51  E-value: 1.24e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  55 NILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTL 134
Cdd:COG0020    4 RALLPEIDPGNLPRHVAIIMDGNGRWAKKRGLPRIEGHRAGVEAVREVVEACAELGIKYLTLYAFSTENWKRPKEEVSFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 135 MNLFTVKLDEFAKRAKDykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVE 214
Cdd:COG0020   84 MGLLREYLRRELDELHK-----NNVRVRVIGDRSRLPESLQEAIEEAEELTKNNTGLTLNIALNYGGRWEIVDAVRKIAR 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 151946257 215 DHLENK-SP-RINIRKFTNKMYMGFHSNkCELLIRTSGHRRLSDYMLWQV--HEnatIEFSDTLWPNFS 279
Cdd:COG0020  159 DVAAGElDPeDIDEETISRYLYTADLPD-PDLLIRTSGEQRISNFLLWQLayAE---LYFTDVLWPDFD 223
PRK14836 PRK14836
undecaprenyl pyrophosphate synthase; Provisional
 66-279 3.76e-45

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237831  Cd Length: 253  Bit Score: 154.84  E-value: 3.76e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLD-E 144
Cdd:PRK14836  14 IPRHIAIIMDGNGRWAKRRGKPRVEGHRAGVRAVRRTIEFCLEKGIEMLTLFAFSSENWLRPADEVSALMELFLKALDrE 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 145 FAKRAKDykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENK-SP- 222
Cdd:PRK14836  94 VDKLHRN------GIRVRFIGDRSRLSPKLQERMEYAERLTASNTRLILSLAVSYGGRWDIVTAARALAREVAAGKlAPd 167

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 151946257 223 RINIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQVhenATIE--FSDTLWPNFS 279
Cdd:PRK14836 168 EIDEALLAQHLALADLPEP-DLFIRTSGELRISNFLLWQL---AYTElyFTDTLWPDFD 222
PRK14831 PRK14831
undecaprenyl pyrophosphate synthase; Provisional
 66-278 1.36e-40

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 184841  Cd Length: 249  Bit Score: 142.78  E-value: 1.36e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFT----VK 141
Cdd:PRK14831  20 LPKHVAVIMDGNGRWAKRRGLPRIMGHRRGVDALKDLLRCCKDWGIGALTAYAFSTENWSRPLEEVNFLMTLFErvlrRE 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 142 LDEFAKRakdykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENK- 220
Cdd:PRK14831 100 LEELMEE---------NVRIRFVGDLDPLPKSLQEEISRSTELTKNNNGIHFNVCTNYGGRQEIVQAARAIAQQVQQGEl 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 151946257 221 SPR-INIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQVhENATIEFSDTLWPNF 278
Cdd:PRK14831 171 DPSeIDENLFESELYTAGIKDP-DLLIRTSGEMRISNFLLWQL-AYAEIYVTDVLWPDF 227
PRK14830 PRK14830
undecaprenyl pyrophosphate synthase; Provisional
 46-278 1.93e-38

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 184840  Cd Length: 251  Bit Score: 137.32  E-value: 1.93e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  46 FSWFYVNLQNILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFN 125
Cdd:PRK14830   2 FKFFKKKKKTSFDEELDKGNIPKHIAIIMDGNGRWAKKRMLPRIAGHKAGMDTVKKITKAASELGVKVLTLYAFSTENWK 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 126 RPKEEVDTLMNL----FTVKLDEFAKRakdykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTS 201
Cdd:PRK14830  82 RPKDEVKFLMNLpvefLDKFVPELIEN---------NVKVNVIGDTDRLPEHTLRALEKAIEKTKNNTGLILNFALNYGG 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 202 RNDMLHTIRDSVEDHLENKsprINIRKFTNKMY----MGFHSNKCELLIRTSGHRRLSDYMLWQVhenATIE--FSDTLW 275
Cdd:PRK14830 153 RAEIVSAVKEIAKDVLDGK---LNPEDITEELIsnylMTKGLPDPDLLIRTSGELRLSNFLLWQL---AYSEfyFTDVLW 226


                 ...
gi 151946257 276 PNF 278
Cdd:PRK14830 227 PDF 229
PRK14841 PRK14841
undecaprenyl pyrophosphate synthase; Provisional
 66-302 6.82e-38

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173302  Cd Length: 233  Bit Score: 135.12  E-value: 6.82e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLD-- 143
Cdd:PRK14841   3 IPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKRPKEEVEFLMDLFVQMIDre 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 144 -EFAKRAKdykdplygSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSP 222
Cdd:PRK14841  83 mELLRRER--------VRVRILGRKEGLPEKVLKKWQEVEEKTKEFDRMTLVIAFNYGGRREILDAVESILKDVSQGKKI 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 223 RINIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQvHENATIEFSDTLWPNFSffamylmilKWSFFSTIQKYNEK 302
Cdd:PRK14841 155 ELTEETFRQYLYLPDVPDP-DLIIRTSGEMRLSNFLLWQ-SAYSELYFFKKLWPDFT---------KRDFLRAIESYSKR 223
PRK14838 PRK14838
isoprenyl transferase;
66-278 2.42e-37

isoprenyl transferase;


Pssm-ID: 184846  Cd Length: 242  Bit Score: 134.23  E-value: 2.42e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDE- 144
Cdd:PRK14838  10 IPQHIAIIMDGNGRWAKERGKERSFGHQAGAETVHIITEEAARLGVKFLTLYTFSTENWNRPSDEVAALMSLLLDSIEEe 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 145 -FAKRakdykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENK--- 220
Cdd:PRK14838  90 tFMKN---------NIRFRIIGDIAKLPEEVQERLNECEEHTAKNTGMCLVLALSYSSRWEITEATRQIATLVQNGElnp 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 151946257 221 ----SPRINIRKFTNKMymgfhsNKCELLIRTSGHRRLSDYMLWQVhENATIEFSDTLWPNF 278
Cdd:PRK14838 161 eeitEESISEHLTTNFM------PDPDLLIRTGGEIRLSNYLLWQC-AYSELYFCDTFWPDF 215
PRK14833 PRK14833
di-trans,poly-cis-decaprenylcistransferase;
67-279 2.69e-35

di-trans,poly-cis-decaprenylcistransferase;


Pssm-ID: 237828  Cd Length: 233  Bit Score: 128.39  E-value: 2.69e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  67 PEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLftvkLDEFA 146
Cdd:PRK14833   5 LKHLAIIMDGNGRWAKLRGKARAAGHKKGVKTLREITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKL----LKKYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 147 KRAKdykdPLY---GSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVE------DHL 217
Cdd:PRK14833  81 KDER----STYlenNIRFKAIGDLEGFSKELRDTILQLEEDTRSFKGFTQVLALNYGSKDEISRAFKKLLEsppshiGEL 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 151946257 218 ENKSPRINIRKFTNKMymgfhsNKCELLIRTSGHRRLSDYMLWQvHENATIEFSDTLWPNFS 279
Cdd:PRK14833 157 ESLEEEISNCLDTADL------PEVDLLIRTGGEMRLSNFLLWQ-SSYAELFFTPILWPDFT 211
PRK14834 PRK14834
isoprenyl transferase;
66-278 9.64e-35

isoprenyl transferase;


Pssm-ID: 237829  Cd Length: 249  Bit Score: 127.56  E-value: 9.64e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLftvkLDEF 145
Cdd:PRK14834  14 VPRHVAIIMDGNGRWAKARGLPRAAGHRAGVEALRRVVRAAGELGIGYLTLFAFSSENWSRPASEVSDLFGL----LRLF 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 146 AKR--AKDYKDplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPR 223
Cdd:PRK14834  90 IRRdlAELHRN---GVRVRVIGERAGLEADICALLNEAEELTRNNTGLNLVIAFNYGSRDEIARAVRRLAREVAEGRLDP 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 151946257 224 INIRKFTNKMYMGFHS-NKCELLIRTSGHRRLSDYMLWQVhENATIEFSDTLWPNF 278
Cdd:PRK14834 167 ASIDAETISANLDTADiPDPDLIIRTSGEQRLSNFLLWQA-AYSELLFVPIHWPDF 221
PRK14832 PRK14832
undecaprenyl pyrophosphate synthase; Provisional
 66-290 1.03e-34

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237827  Cd Length: 253  Bit Score: 127.42  E-value: 1.03e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKL-DE 144
Cdd:PRK14832  18 IPQHIAVIMDGNGRWATSQGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENWQRPIEEVDFLMLLFERLLrRE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 145 FAKRAKDykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVED-HLENKSP- 222
Cdd:PRK14832  98 LAQMHRE------GVRISFIGDLSALPKSLQTEMERSMTETLNNQAIHFTVAVNYGSRNEITRACRQVAELvQQGKLSAd 171

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 223 RINIRKFTNKMYMGfHSNKCELLIRTSGHRRLSDYMLWQVhenATIE--FSDTLWPNFSFFAMYLMILKW 290
Cdd:PRK14832 172 AVNEQLVEQHLYTA-DTPPPDLLIRTSGEMRLSNFLLWQM---AYTEmyFTDILWPDFDRAAFHQALLSY 237
PRK14839 PRK14839
di-trans,poly-cis-decaprenylcistransferase;
69-278 8.47e-33

di-trans,poly-cis-decaprenylcistransferase;


Pssm-ID: 237832  Cd Length: 239  Bit Score: 122.17  E-value: 8.47e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  69 HVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDEFAKR 148
Cdd:PRK14839  12 HVAIIMDGNGRWATARGLPRLAGHRAGVEAIRRVVEAAPDLGIGTLTLYAFSSDNWRRPAAEVGGLMRLLRAYLRNETER 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 149 AKDykdplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRdsvedhlenksPRINIRK 228
Cdd:PRK14839  92 LAR-----NGVRLTVIGRRDRLPDGIPEAIARAEAATAGGDRLHLRIAVDYSARDAILAAAA-----------KALGPEG 155

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 151946257 229 FTNKMY---MGFHSNKCELLIRTSGHRRLSDYMLWqvhENATIE--FSDTLWPNF 278
Cdd:PRK14839 156 LSREAFsdlLTGDGGDVDLLIRTGGEKRLSDFLLW---ESAYAElhFTDRMWPDF 207
PRK14828 PRK14828
undecaprenyl pyrophosphate synthase; Provisional
 65-278 1.47e-32

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237825  Cd Length: 256  Bit Score: 121.78  E-value: 1.47e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  65 PVPEHVSFIMDGNRRYAK-SRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLD 143
Cdd:PRK14828  25 QVPGHVGIIVDGNRRWARkAGFTDVSQGHRAGAAKIGEFLGWCDETDVNVVTLYLLSTDNLGRPSEELNPLLDIIEDVVR 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 144 EFAkrakdykdPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSP- 222
Cdd:PRK14828 105 QLA--------PDGRWRVRHVGSLDLLPAPSANRLKEAEEATVGNDGIKVNVAVGYGGRQEIVDAVRSLLTEHKDKGTSi 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 151946257 223 -----RINIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQvHENATIEFSDTLWPNF 278
Cdd:PRK14828 177 delaeSVTVDAISTHLYTGGQPDP-DLVIRTSGEQRLSGFMLWQ-SAHSEYYFCETYWPAF 235
PRK14829 PRK14829
undecaprenyl pyrophosphate synthase; Provisional
 66-278 4.05e-31

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237826  Cd Length: 243  Bit Score: 117.58  E-value: 4.05e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNlFTvklDEF 145
Cdd:PRK14829  14 LPRHIAVVMDGNGRWATQRGLKRTEGHKAGEPVLFDVVAGAIEAGVPYLSLYTFSTENWKRSPDEVRFLMG-FS---RDV 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 146 AKRAKDYKDPlYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENK-SP-R 223
Cdd:PRK14829  90 IHRRREQMDE-WGVRVRWSGRRPRLWKSVIDELEAAEELTKNNTTMDLVFCVNYGGRAEIADAAAAIAREVRDGKiSGdR 168

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 151946257 224 INIRKFTNKMYMGFHSNkCELLIRTSGHRRLSDYMLWQVhENATIEFSDTLWPNF 278
Cdd:PRK14829 169 VTEKMISDHLYNPDMPD-VDLFLRTSGEQRTSNFLLWQS-AYAELDFVPKLFPDF 221
PRK14835 PRK14835
isoprenyl transferase;
48-278 1.38e-30

isoprenyl transferase;


Pssm-ID: 237830  Cd Length: 275  Bit Score: 117.25  E-value: 1.38e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  48 WFYvnlQNILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRP 127
Cdd:PRK14835  26 WGY---EQRLEREVKHGKLPRHLGLILDGNRRFARALGLQREMGHEFGVQKAYEVLEWCLELGIPTVTIWVFSTDNFSRS 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 128 KEEVDTLMNLFtvkLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDmlh 207
Cdd:PRK14835 103 PAEVETLMNLF---EREARRMAVDPRIHANRVRVRAIGRHDGFPPKVLEALEELEERTEGHEGMLLNIAVGYGGREE--- 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 208 tIRDSVEDHL-----ENKSPR-----INIRKFTNKMYMGFHSNKcELLIRTSGHRRLSDYMLWQ-VHenATIEFSDTLWP 276
Cdd:PRK14835 177 -IVDAVKSLLleaaaTGKSPEevaaeLTPEHISAHLYTAGVPDP-DFIIRTSGEIRLSGFLLWQsAY--SEYYFCDVYWP 252


                 ..
gi 151946257 277 NF 278
Cdd:PRK14835 253 GF 254
PTZ00349 PTZ00349
dehydrodolichyl diphosphate synthetase; Provisional
 53-297 4.16e-30

dehydrodolichyl diphosphate synthetase; Provisional


Pssm-ID: 185571  Cd Length: 322  Bit Score: 117.02  E-value: 4.16e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  53 LQNILIKALRVGPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVD 132
Cdd:PTZ00349   6 IERFITSLLRDFINIKHISIIMDGNRRFAKEKGLHSAIGHFMGSKALIQIIEICIKLKIKILSVFSFSLLNYNRSPEEIH 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 133 TL--MNLFT-VKLDEFAKRAKDYKdplygSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDML--- 206
Cdd:PTZ00349  86 FLfyLNLLIlINEDFFFKFIKDNK-----IKIKIIGNLSYINDAYRKIIHDIEEKTENFDNILLNIFFSYTSRNEMSlck 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 207 ---HTIRDSVEDHLENKSPRINIRKFTNKMYMGF--------------HSNKCE-------------------------- 243
Cdd:PTZ00349 161 fnpNLYFDTYKNLLEEKKILCGSNILTDPIKEGTfaipddedecdyldHELENEridldlkfdgdcicgeksflneeqie 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 151946257 244 -----------------LLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQ 297
Cdd:PTZ00349 241 ivnyhkklltsdlpppnILIRTSGEKRLSDFMLYQISEFTEIYFINEYWPIFNFLQFIYIILHYTIFQTTK 311
PRK10240 PRK10240
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase;
74-278 5.73e-30

(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase;


Pssm-ID: 182326  Cd Length: 229  Bit Score: 114.31  E-value: 5.73e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  74 MDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYK 153
Cdd:PRK10240   1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 154 dplygSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSPRINIRKFTNKM 233
Cdd:PRK10240  81 -----VRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEQVQQGNLQPDQIDEEMLNQ 155

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 151946257 234 YMGFHS-NKCELLIRTSGHRRLSDYMLWQVhENATIEFSDTLWPNF 278
Cdd:PRK10240 156 HICMHElAPVDLVIRTGGEHRISNFLLWQI-AYAELYFTDVLWPDF 200
PRK14842 PRK14842
undecaprenyl pyrophosphate synthase; Provisional
 66-278 4.51e-28

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173303  Cd Length: 241  Bit Score: 109.31  E-value: 4.51e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFT----VK 141
Cdd:PRK14842   8 IPAHIAVIMDGNGRWAESQGKKRSEGHREGANAIDRLMDASLEYGLKNISLYAFSTENWKRPITEIRSIFGLLVefieTR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 142 LDEFAKRakdykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLhtiRDSVEDHLENKS 221
Cdd:PRK14842  88 LDTIHAR---------GIRIHHSGSRKKLTRTVLDKIDFAMAKTKKNKNLTVNFCLNYGSHDELL---RAAQEVFLARKA 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 151946257 222 PRINIRK-FTNKMYMGFHSNK----CELLIRTSGHRRLSDYMLWQvHENATIEFSDTLWPNF 278
Cdd:PRK14842 156 KKVTLEKpLKEKEFEKFLYTSplppVDLLIRTAGEQRLSNFLLWQ-SAYAELYFTDTLWPDF 216
PRK14827 PRK14827
undecaprenyl pyrophosphate synthase; Provisional
 66-278 1.62e-27

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173288  Cd Length: 296  Bit Score: 109.27  E-value: 1.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  66 VPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLftvKLDEF 145
Cdd:PRK14827  67 LPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGF---NRDVV 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 146 AKRAKDYKDplYGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEdhlENKSPRIN 225
Cdd:PRK14827 144 RRRRDNLNK--MGVRIRWVGSRPRLWRSVINELAIAEEMTKSNDVITINYCVNYGGRTEITEATREIAR---EAAAGRLN 218

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 151946257 226 IRKFTNKMYmGFHSNK-----CELLIRTSGHRRLSDYMLWQVHENATIeFSDTLWPNF 278
Cdd:PRK14827 219 PERITESTI-ARHLQRpdipdVDLFLRTSGEQRSSNFMLWQAAYAEYI-FQDKLWPDY 274
PRK14840 PRK14840
undecaprenyl pyrophosphate synthase; Provisional
 59-279 2.95e-27

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173301  Cd Length: 250  Bit Score: 107.62  E-value: 2.95e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  59 KALRVGPVPEHVSFIMDGNRRYAKSRRLPVKK----GHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTL 134
Cdd:PRK14840  11 NFPSLQSLPRHVAIIMDGNRRWYRKHEQFCQKraisGHYYGAKSLPQIVDTALHLGIEVLTLFAFSTENFSRSKEEVAEL 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 135 MNLFTVKLDEfakrakdyKDP-LYGSKIRI--VGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRD 211
Cdd:PRK14840  91 FSLFNSQLDS--------QLPyLHENEIRLrcIGDLSKLPQELQNNIEQASSATAHYSRMELVLAINYGGKDELVRAFKK 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 151946257 212 SVEDHLENKSPRINIRKFTNKMYMGFHS-NKCELLIRTSGHRRLSDYMLWQVhenATIEF--SDTLWPNFS 279
Cdd:PRK14840 163 LHQDLANKKISSDDISEELISSYLDTSGlPDPDLLIRTGGEMRVSNFLLWQI---AYTELyvTDVLWPDFT 230
PRK14837 PRK14837
undecaprenyl pyrophosphate synthase; Provisional
 64-281 3.73e-27

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173298  Cd Length: 230  Bit Score: 106.83  E-value: 3.73e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257  64 GPVPEHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRPKEEVDTLMNLFTVKLD 143
Cdd:PRK14837   4 NSLPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFSTENWNRTDSEIEHLMFLIADYLS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 144 -EFAKRAKDykdplyGSKIRIVGDQSLLSPEMRKKIKKVEEITQDGDDFTLFICFPYTSRNDMLHTIRDSVEDHLENKSP 222
Cdd:PRK14837  84 sEFNFYKKN------NIKIIVSGDIESLSEEVKKSIKDAISFTKNFDGLVLNLAINYGGRNEIVRAVKKFLSSGLDLETL 157

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 151946257 223 RINI-RKFTNKMYMGfhsnKCELLIRTSGHRRLSDYMLWQVHENATIeFSDTLWPNFSFF 281
Cdd:PRK14837 158 NENVfSKFLDNPELP----DLDLLIRTGGDMRISNFLLWRIAYCEFI-FSNVLWPEYYVN 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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