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Conserved domains on  [gi|1511244830|ref|YP_009531186|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Ornebius fuscicerci]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-115 3.51e-32

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 109.10  E-value: 3.51e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   5 FIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTS 84
Cdd:MTH00161    3 LIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1511244830  85 NFLLWSLTLTFFIIILLLGLYHEWINGALQW 115
Cdd:MTH00161   83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-115 3.51e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 109.10  E-value: 3.51e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   5 FIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTS 84
Cdd:MTH00161    3 LIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1511244830  85 NFLLWSLTLTFFIIILLLGLYHEWINGALQW 115
Cdd:MTH00161   83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 5.30e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 5.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPsIIILYTSNFLLWSLTLTFFIIILLLGLYHEWING 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP-WAVSFRELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1511244830 112 ALQ 114
Cdd:pfam00507  92 ALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 5.32e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.24  E-value: 5.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLP-SIIILYTSNFLLWSLTLtfFIIILLLGLYHEWIN 110
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwAVVFRELGWFGLIEMLV--FIAILLVGLIYAWKK 112


                  ....*
gi 1511244830 111 GALQW 115
Cdd:COG0838   113 GALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-115 3.51e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 109.10  E-value: 3.51e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   5 FIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTS 84
Cdd:MTH00161    3 LIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1511244830  85 NFLLWSLTLTFFIIILLLGLYHEWINGALQW 115
Cdd:MTH00161   83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 5.01e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 108.79  E-value: 5.01e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   1 MYICFIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1511244830  81 LYTSNFLLWSLTLTFFIIILLLGLYHEWINGALQWTL 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 2.11e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 99.68  E-value: 2.11e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   1 MYICFIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1511244830  81 LYTSNFLLWSLTLTFFIIILLLGLYHEWINGALQW 115
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 1.90e-25

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 92.23  E-value: 1.90e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   1 MYICFIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1511244830  81 LYTSNFLLWSLTLTFFIIILLLGLYHEWINGALQWT 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
32-114 5.30e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 5.30e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPsIIILYTSNFLLWSLTLTFFIIILLLGLYHEWING 111
Cdd:pfam00507  13 NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP-WAVSFRELGWFGFVEMLIFIAILLVGLVYAWKKG 91


                  ...
gi 1511244830 112 ALQ 114
Cdd:pfam00507  92 ALE 94
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 29-115 2.44e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 86.90  E-value: 2.44e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  29 MTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPsiiilytsnfLLW-----SLTLTFF-----II 98
Cdd:MTH00136   28 MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLP----------LPWgdqlpSPLLTFFwatavLI 97

                          90
                  ....*....|....*..
gi 1511244830  99 ILLLGLYHEWINGALQW 115
Cdd:MTH00136   98 LLTLGLIYEWLQGGLEW 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 34-115 5.12e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 85.80  E-value: 5.12e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  34 EKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTSNFLLWSLTLTFFIIILLLGLYHEWINGAL 113
Cdd:MTH00042   33 EKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNGGL 112


                  ..
gi 1511244830 114 QW 115
Cdd:MTH00042  113 EW 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-116 1.24e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 84.99  E-value: 1.24e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  34 EKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTSNFLLWSLTLTFFIIILLLGLYHEWINGAL 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ...
gi 1511244830 114 QWT 116
Cdd:MTH00106  112 EWT 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 34-115 3.93e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 83.50  E-value: 3.93e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  34 EKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPS---IIILYTSNFLLWSltlTFFIIILLLGLYHEWIN 110
Cdd:MTH00069   31 EKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQLNTPTNTLFWS---TLILILLTLGLIYEWIQ 107


                  ....*
gi 1511244830 111 GALQW 115
Cdd:MTH00069  108 GGLEW 112
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 29-116 8.43e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 82.62  E-value: 8.43e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  29 MTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTSNFLLwSLTLTFFIIILL-LGLYHE 107
Cdd:MTH00113   27 TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTT-TLTWATIILTLLtLGLIYE 105


                  ....*....
gi 1511244830 108 WINGALQWT 116
Cdd:MTH00113  106 WLQGGLEWA 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-115 3.11e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 78.79  E-value: 3.11e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   5 FIMFLLPLTISLIIITIISMTSKKMTMNREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTS 84
Cdd:MTH00203    4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1511244830  85 NFLLWSltLTFFIIILLLGLYHEWINGALQW 115
Cdd:MTH00203   84 SLSLLL--AFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 32-115 5.32e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 78.24  E-value: 5.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLP-SIIILYTSNFLLWSLTLtfFIIILLLGLYHEWIN 110
Cdd:COG0838    35 NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPwAVVFRELGWFGLIEMLV--FIAILLVGLIYAWKK 112


                  ....*
gi 1511244830 111 GALQW 115
Cdd:COG0838   113 GALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 34-115 9.26e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 75.13  E-value: 9.26e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  34 EKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIIlYTSNFLLWSLTLTFFIIILLLGLYHEWINGAL 113
Cdd:MTH00055   37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVV-YNQIGLFGFWVMYLFLIILTIGLIYEWVKGGL 115


                  ..
gi 1511244830 114 QW 115
Cdd:MTH00055  116 EW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-116 2.47e-18

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 74.13  E-value: 2.47e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLP-SIIILYTSNFLLWSltLTFFIIILLLGLYHEWIN 110
Cdd:PRK06602   38 DREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPwAVSFREIGWLGFVE--AMIFILVLLVGLVYLWRK 115


                  ....*.
gi 1511244830 111 GALQWT 116
Cdd:PRK06602  116 GALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-115 3.48e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 68.55  E-value: 3.48e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPsIIILYTSNFLLWSLTLTFFIIILLLGLYHEWING 111
Cdd:MTH00018   30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFP-WCVLYNQIAPFGFWTMVGFLFILTLGLIYEWIKG 108


                  ....
gi 1511244830 112 ALQW 115
Cdd:MTH00018  109 GLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 1.32e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 64.57  E-value: 1.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTSNFLLWSLTLTfFIIILLLGLYHEWING 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYT-FLIVLAIGLAYEWIKG 118


                  ....
gi 1511244830 112 ALQW 115
Cdd:MTH00030  119 GLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 3.17e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.20  E-value: 3.17e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIIlYTSNFLLWSLTLTFFIIILLLGLYHEWING 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVA-YDKLGLFALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 1511244830 112 ALQW 115
Cdd:PRK07756  118 VLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
5-115 3.71e-07

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 45.43  E-value: 3.71e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830   5 FIMFLLPLTISLIIITIISMTSKKMT-MNRE--KNSPFECGFDPFKSSRlPFSLQFFLITIIFLIFDVEIALLLP-SIII 80
Cdd:PRK08489   14 FVLLVLTFVAFFLTTRLARFISRKLAqKNTEklKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPwAVDF 92

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1511244830  81 LYTSNFLLWSLTLtfFIIILLLGLYHEWINGALQW 115
Cdd:PRK08489   93 KLLGLFGLIEMLL--FIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-116 8.14e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 38.88  E-value: 8.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  32 NREKNSPFECGFDPFKSSRLP--FSLQFFLITIIFLIFDVEIALLLPsIIILYTSNFLLWSLTLTFFIIILLLGLYHEWI 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP-WAVSFDALGVFGLVEMALFMLTVFVAYAYVWR 112


                  ....*..
gi 1511244830 110 NGALQWT 116
Cdd:PRK07928  113 RGGLEWD 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 35-116 1.04e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 36.03  E-value: 1.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  35 KNSPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLLPSIIILYTSNFLLWsltltFFIIILLLGLYHEWINGALQ 114
Cdd:MTH00092   34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISFF-----MLMIFIFFGFYMEWWYGKLI 108


                  ..
gi 1511244830 115 WT 116
Cdd:MTH00092  109 WV 110
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 37-116 6.74e-03

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 33.72  E-value: 6.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1511244830  37 SPFECGFDPFKSSRLPFSLQFFLITIIFLIFDVEIALLL--PSIIILYTSNFLLWsltltFFIIILLLGLYHEWINGALQ 114
Cdd:MTH00060   39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLnmPFQGLLFYNFWYYY-----FFLLLLFLGFVVELFSGYVR 113


                  ..
gi 1511244830 115 WT 116
Cdd:MTH00060  114 WV 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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