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Conserved domains on  [gi|150951211|ref|XP_001387494|]
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mitochondrial protein, partial [Scheffersomyces stipitis CBS 6054]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
1-460 2.19e-120

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 360.55  E-value: 2.19e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKcsdNMRINLDFFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMDNHKVRFLGNVNIGKD 80
Cdd:PLN02852  29 VCVVGSGPAGFYTADKLLKA---HDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRD 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  81 ISLKQLESYYHSIVLSYGSTSaDNKLQVAGSDLPGVISARQFVNWYNGHPDFyatgkKFVPPPLDQIEDVTIIGNGNVAL 160
Cdd:PLN02852 106 VSLSELRDLYHVVVLAYGAES-DRRLGIPGEDLPGVLSAREFVWWYNGHPDC-----VHLPPDLKSSDTAVVLGQGNVAL 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 161 DVARILLAdPATHWSKTDISVDALQVLQNSTVKNVNIVARRGLLESAFSNKEIRELFELSN------ENSIKFIPLDDKE 234
Cdd:PLN02852 180 DCARILLR-PTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNvrvrikEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 235 FENidikslGRVDKRKVSIIEKYTKASHTAPAAD-RTWSLQYLKSPKAFLPHASNAKLLSATEVVKNELIHDPLTNTAKV 313
Cdd:PLN02852 259 LKA------SRPKRRVYELLSKAAAAGKCAPSGGqRELHFVFFRNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVA 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 314 RPTSESETIKNELVILSIGYQGSPLlgfeeNGILFEKNR--LFNKH----EEEHNSVYKKGWYTSGWIKNGPKGVIATTM 387
Cdd:PLN02852 333 VGTGEFEDLPCGLVLKSIGYKSLPV-----DGLPFDHKRgvVPNVHgrvlSSASGADTEPGLYVVGWLKRGPTGIIGTNL 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 388 MDSFDTADKVLEDLSNG-IHLETSGGD-----IHDLLKDK--TVVGWDNWKVLDAYEKSKGEKEGKSRYKICNSEDMIKI 459
Cdd:PLN02852 408 TCAEETVASIAEDLEQGrLRGVASPPKpgrdgLLELLESRgvRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKA 487

                 .
gi 150951211 460 A 460
Cdd:PLN02852 488 A 488
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
1-460 2.19e-120

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 360.55  E-value: 2.19e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKcsdNMRINLDFFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMDNHKVRFLGNVNIGKD 80
Cdd:PLN02852  29 VCVVGSGPAGFYTADKLLKA---HDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRD 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  81 ISLKQLESYYHSIVLSYGSTSaDNKLQVAGSDLPGVISARQFVNWYNGHPDFyatgkKFVPPPLDQIEDVTIIGNGNVAL 160
Cdd:PLN02852 106 VSLSELRDLYHVVVLAYGAES-DRRLGIPGEDLPGVLSAREFVWWYNGHPDC-----VHLPPDLKSSDTAVVLGQGNVAL 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 161 DVARILLAdPATHWSKTDISVDALQVLQNSTVKNVNIVARRGLLESAFSNKEIRELFELSN------ENSIKFIPLDDKE 234
Cdd:PLN02852 180 DCARILLR-PTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNvrvrikEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 235 FENidikslGRVDKRKVSIIEKYTKASHTAPAAD-RTWSLQYLKSPKAFLPHASNAKLLSATEVVKNELIHDPLTNTAKV 313
Cdd:PLN02852 259 LKA------SRPKRRVYELLSKAAAAGKCAPSGGqRELHFVFFRNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVA 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 314 RPTSESETIKNELVILSIGYQGSPLlgfeeNGILFEKNR--LFNKH----EEEHNSVYKKGWYTSGWIKNGPKGVIATTM 387
Cdd:PLN02852 333 VGTGEFEDLPCGLVLKSIGYKSLPV-----DGLPFDHKRgvVPNVHgrvlSSASGADTEPGLYVVGWLKRGPTGIIGTNL 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 388 MDSFDTADKVLEDLSNG-IHLETSGGD-----IHDLLKDK--TVVGWDNWKVLDAYEKSKGEKEGKSRYKICNSEDMIKI 459
Cdd:PLN02852 408 TCAEETVASIAEDLEQGrLRGVASPPKpgrdgLLELLESRgvRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKA 487

                 .
gi 150951211 460 A 460
Cdd:PLN02852 488 A 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
1-383 1.07e-30

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 122.94  E-value: 1.07e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHiLSKcsdnMRINLDFFERLPAPFGLSRYGVaPDHPEVKnceEYLE---NIMDNHKVRFLGNVNI 77
Cdd:COG0493  124 VAVVGSGPAGLAAAYQ-LAR----AGHEVTVFEALDKPGGLLRYGI-PEFRLPK---DVLDreiELIEALGVEFRTNVEV 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  78 GKDISLKQLESYYHSIVLSYGSTsADNKLQVAGSDLPGVISARQFVNWYNGHPDFY---ATGKKfvpppldqiedVTIIG 154
Cdd:COG0493  195 GKDITLDELLEEFDAVFLATGAG-KPRDLGIPGEDLKGVHSAMDFLTAVNLGEAPDtilAVGKR-----------VVVIG 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 155 NGNVALDVARILLADPAthwsktdisvdalqvlqnstvKNVNIVARRGLLESAFSNKEIRELFElsnensikfiplddke 234
Cdd:COG0493  263 GGNTAMDCARTALRLGA---------------------ESVTIVYRRTREEMPASKEEVEEALE---------------- 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 235 fENIDIkslgrvdkrkvsiiekytkashtapaadrtwslQYLKSPKAFLPHASNAklLSATEVVKNELIHDPLTNTAKVR 314
Cdd:COG0493  306 -EGVEF---------------------------------LFLVAPVEIIGDENGR--VTGLECVRMELGEPDESGRRRPV 349
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 315 PTSESE-TIKNELVILSIGYQGSPLLGFEENGILFEKNRLFNKHEEEHNSVyKKGWYTSGWIKNGPKGVI 383
Cdd:COG0493  350 PIEGSEfTLPADLVILAIGQTPDPSGLEEELGLELDKRGTIVVDEETYQTS-LPGVFAGGDAVRGPSLVV 418
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
1-460 2.19e-120

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 360.55  E-value: 2.19e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKcsdNMRINLDFFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMDNHKVRFLGNVNIGKD 80
Cdd:PLN02852  29 VCVVGSGPAGFYTADKLLKA---HDGARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRVSFFGNVTLGRD 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  81 ISLKQLESYYHSIVLSYGSTSaDNKLQVAGSDLPGVISARQFVNWYNGHPDFyatgkKFVPPPLDQIEDVTIIGNGNVAL 160
Cdd:PLN02852 106 VSLSELRDLYHVVVLAYGAES-DRRLGIPGEDLPGVLSAREFVWWYNGHPDC-----VHLPPDLKSSDTAVVLGQGNVAL 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 161 DVARILLAdPATHWSKTDISVDALQVLQNSTVKNVNIVARRGLLESAFSNKEIRELFELSN------ENSIKFIPLDDKE 234
Cdd:PLN02852 180 DCARILLR-PTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNvrvrikEADLTLSPEDEEE 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 235 FENidikslGRVDKRKVSIIEKYTKASHTAPAAD-RTWSLQYLKSPKAFLPHASNAKLLSATEVVKNELIHDPLTNTAKV 313
Cdd:PLN02852 259 LKA------SRPKRRVYELLSKAAAAGKCAPSGGqRELHFVFFRNPTRFLDSGDGNGHVAGVKLERTVLEGAAGSGKQVA 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 314 RPTSESETIKNELVILSIGYQGSPLlgfeeNGILFEKNR--LFNKH----EEEHNSVYKKGWYTSGWIKNGPKGVIATTM 387
Cdd:PLN02852 333 VGTGEFEDLPCGLVLKSIGYKSLPV-----DGLPFDHKRgvVPNVHgrvlSSASGADTEPGLYVVGWLKRGPTGIIGTNL 407
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 388 MDSFDTADKVLEDLSNG-IHLETSGGD-----IHDLLKDK--TVVGWDNWKVLDAYEKSKGEKEGKSRYKICNSEDMIKI 459
Cdd:PLN02852 408 TCAEETVASIAEDLEQGrLRGVASPPKpgrdgLLELLESRgvRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLKA 487

                 .
gi 150951211 460 A 460
Cdd:PLN02852 488 A 488
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
1-459 9.19e-55

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 190.48  E-value: 9.19e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSkcsdNMRINLDFFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMDNHKVRFLGNVNIGKD 80
Cdd:PTZ00188  42 VGIIGAGPSALYCCKHLLK----HERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPNYRFFGNVHVGVD 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  81 ISLKQLESYYHSIVLSYGSTSA--------DNKLQVAGSDLP----GVISARQFVNWYNghpDFYATGK-KFVPPPLDQI 147
Cdd:PTZ00188 118 LKMEELRNHYNCVIFCCGASEVsipigqqdEDKAVSGGETNPrkqnGIFHARDLIYFYN---NMYNDVRcKAVDNYLNSF 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 148 EDVT---IIGNGNVALDVARILLADPaTHWSKTDISVDALQVLQNSTVKNVNIVARRGLLESAFSNKEIRELFELSNENS 224
Cdd:PTZ00188 195 ENFTtsiIIGNGNVSLDIARILIKSP-DDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRELISLENTKV 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 225 IkfipLDDKEFE-NIDIKSLGRVDKRKVSIIEKYTKASHtapaadrtwSLQYLKSPKAFLPHASNAKLLSATEVVKNELI 303
Cdd:PTZ00188 274 I----LSKKNYDlCCHLKSDEENTNMKKRQHEIFQKMVK---------NYEEVEKNKEFYKTYKIIEFIFYFEIRQIRPI 340
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 304 HDPLTNTA----KVRPTS-----ESETIKNELVILSIGYQGSpllGFEENgiLFekNRLFNKHEEEHNSvYKKGWYTSGW 374
Cdd:PTZ00188 341 DGAMKNVElelnKNVPMSfssfkENKVLVTPLVIFATGFKKS---NFAEN--LY--NQSVQMFKEDIGQ-HKFAIFKAGW 412
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 375 IKNGPKGVIATTMMDSFDTADKVLEDLSN-GIHLETsggDIHDLLKDKTV--VGWDNWKVLDAYEKSKGEKEGKSRYKIC 451
Cdd:PTZ00188 413 FDKGPKGNIASQILNSKNSTHLVLNFLQKvDIFFDN---DISSLLKEKQIpyVSFDDWTYLHQLEKQMGAQQNKIAQKFS 489

                 ....*...
gi 150951211 452 NSEDMIKI 459
Cdd:PTZ00188 490 QTGEVLRI 497
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
1-383 1.07e-30

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 122.94  E-value: 1.07e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHiLSKcsdnMRINLDFFERLPAPFGLSRYGVaPDHPEVKnceEYLE---NIMDNHKVRFLGNVNI 77
Cdd:COG0493  124 VAVVGSGPAGLAAAYQ-LAR----AGHEVTVFEALDKPGGLLRYGI-PEFRLPK---DVLDreiELIEALGVEFRTNVEV 194
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  78 GKDISLKQLESYYHSIVLSYGSTsADNKLQVAGSDLPGVISARQFVNWYNGHPDFY---ATGKKfvpppldqiedVTIIG 154
Cdd:COG0493  195 GKDITLDELLEEFDAVFLATGAG-KPRDLGIPGEDLKGVHSAMDFLTAVNLGEAPDtilAVGKR-----------VVVIG 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 155 NGNVALDVARILLADPAthwsktdisvdalqvlqnstvKNVNIVARRGLLESAFSNKEIRELFElsnensikfiplddke 234
Cdd:COG0493  263 GGNTAMDCARTALRLGA---------------------ESVTIVYRRTREEMPASKEEVEEALE---------------- 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 235 fENIDIkslgrvdkrkvsiiekytkashtapaadrtwslQYLKSPKAFLPHASNAklLSATEVVKNELIHDPLTNTAKVR 314
Cdd:COG0493  306 -EGVEF---------------------------------LFLVAPVEIIGDENGR--VTGLECVRMELGEPDESGRRRPV 349
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 315 PTSESE-TIKNELVILSIGYQGSPLLGFEENGILFEKNRLFNKHEEEHNSVyKKGWYTSGWIKNGPKGVI 383
Cdd:COG0493  350 PIEGSEfTLPADLVILAIGQTPDPSGLEEELGLELDKRGTIVVDEETYQTS-LPGVFAGGDAVRGPSLVV 418
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
1-350 1.29e-19

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 91.01  E-value: 1.29e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFyTAHHILSKcsdnMRINLDFFERLPAPFGLSRYGVapdhPE-------VKNCEEYLENImdnhKVRFLG 73
Cdd:PRK11749 143 VAVIGAGPAGL-TAAHRLAR----KGYDVTIFEARDKAGGLLRYGI----PEfrlpkdiVDREVERLLKL----GVEIRT 209
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  74 NVNIGKDISLKQLESYYHSIVLSYGSTSAdNKLQVAGSDLPGVISARQFVNWYN-GHPDF-YATGKKfvpppldqiedVT 151
Cdd:PRK11749 210 NTEVGRDITLDELRAGYDAVFIGTGAGLP-RFLGIPGENLGGVYSAVDFLTRVNqAVADYdLPVGKR-----------VV 277
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 152 IIGNGNVALDVARilladpathwskTDISVDAlqvlqnstvKNVNIVARRGLLESAFSNKEIrelfELSNENSIKFIpld 231
Cdd:PRK11749 278 VIGGGNTAMDAAR------------TAKRLGA---------ESVTIVYRRGREEMPASEEEV----EHAKEEGVEFE--- 329
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 232 dkefenidikslgrvdkrkvsiiekytkashtapaadrtwslqYLKSPKAFLphaSNAKLLSATEVVKNELIHDPLTNTA 311
Cdd:PRK11749 330 -------------------------------------------WLAAPVEIL---GDEGRVTGVEFVRMELGEPDASGRR 363
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 150951211 312 KVRPTSESETIKNELVILSIGYQGSPLLGFEENGILFEK 350
Cdd:PRK11749 364 RVPIEGSEFTLPADLVIKAIGQTPNPLILSTTPGLELNR 402
PRK13984 PRK13984
putative oxidoreductase; Provisional
1-229 1.74e-17

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 85.20  E-value: 1.74e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFyTAHHILSKcsdnMRINLDFFERLPAPFGLSRYGVapdhPEVKNCEEYLE---NIMDNHKVRFLGNVNI 77
Cdd:PRK13984 286 VAIVGSGPAGL-SAAYFLAT----MGYEVTVYESLSKPGGVMRYGI----PSYRLPDEALDkdiAFIEALGVKIHLNTRV 356
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  78 GKDISLKQLESYYHSIVLSYGSTSAdNKLQVAGSDLPGVISA----RQFVNWYNGHpdfyatGKKfvpPPLDqiEDVTII 153
Cdd:PRK13984 357 GKDIPLEELREKHDAVFLSTGFTLG-RSTRIPGTDHPDVIQAlpllREIRDYLRGE------GPK---PKIP--RSLVVI 424
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 154 GNGNVALDVARilladpathwsktdiSVDALQVLQNSTVkNVNIVArrglLESAFSN-----KEIRElfelSNENSIKFI 228
Cdd:PRK13984 425 GGGNVAMDIAR---------------SMARLQKMEYGEV-NVKVTS----LERTFEEmpadmEEIEE----GLEEGVVIY 480

                 .
gi 150951211 229 P 229
Cdd:PRK13984 481 P 481
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
1-215 7.15e-15

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 77.08  E-value: 7.15e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKCSDnmrinLDFFERLPAPFGLSRYGVapdhPEVKNCEEYLENimDNHKVRFLG-----NV 75
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHD-----VTIFDANEQAGGMMRYGI----PRFRLPESVIDA--DIAPLRAMGaefrfNT 264
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  76 NIGKDISLKQLESYYHSIVLSYGSTSAdNKLQVAGSDLPGVISARQFVNwynghpdFYATGKKFVPPPldqieDVTIIGN 155
Cdd:PRK12814 265 VFGRDITLEELQKEFDAVLLAVGAQKA-SKMGIPGEELPGVISGIDFLR-------NVALGTALHPGK-----KVVVIGG 331
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211 156 GNVALDVARILLADPATHwsktdisvdalqvlqnstvknVNIVARRGLLESAFSNKEIRE 215
Cdd:PRK12814 332 GNTAIDAARTALRLGAES---------------------VTILYRRTREEMPANRAEIEE 370
gltD PRK12810
glutamate synthase subunit beta; Reviewed
1-164 1.30e-13

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 72.50  E-value: 1.30e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFyTAHHILSKCSdnmrINLDFFERLPAPFGLSRYGVapdhPEVKnceeyLE--------NIMDNHKVRFL 72
Cdd:PRK12810 146 VAVVGSGPAGL-AAADQLARAG----HKVTVFERADRIGGLLRYGI----PDFK-----LEkevidrriELMEAEGIEFR 211
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  73 GNVNIGKDISLKQLESYYHSIVLSYGSTSAdNKLQVAGSDLPGV-------ISARQFVNWYNGHPDFYATGKKfvpppld 145
Cdd:PRK12810 212 TNVEVGKDITAEELLAEYDAVFLGTGAYKP-RDLGIPGRDLDGVhfamdflIQNTRRVLGDETEPFISAKGKH------- 283
                        170
                 ....*....|....*....
gi 150951211 146 qiedVTIIGNGNVALDVAR 164
Cdd:PRK12810 284 ----VVVIGGGDTGMDCVG 298
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
1-164 6.34e-13

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 70.67  E-value: 6.34e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHiLSKCSDNMRInldfFERLPAPFGLSRYGVapdhPEVKNCEEYLEN----IMDnhkvrfLG--- 73
Cdd:PRK12771 140 VAVIGGGPAGLSAAYH-LRRMGHAVTI----FEAGPKLGGMMRYGI----PAYRLPREVLDAeiqrILD------LGvev 204
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  74 --NVNIGKDISLKQLESYYHSIVLSYGsTSADNKLQVAGSDLPGVISARQFVNWYN-GHPDFyaTGKKfvpppldqiedV 150
Cdd:PRK12771 205 rlGVRVGEDITLEQLEGEFDAVFVAIG-AQLGKRLPIPGEDAAGVLDAVDFLRAVGeGEPPF--LGKR-----------V 270
                        170
                 ....*....|....
gi 150951211 151 TIIGNGNVALDVAR 164
Cdd:PRK12771 271 VVIGGGNTAMDAAR 284
PRK12831 PRK12831
putative oxidoreductase; Provisional
1-167 5.97e-11

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 64.27  E-value: 5.97e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFyTAHHILSKcsdnMRINLDFFERLPAPFGLSRYGVapdhPEVK-NCEEYLENIMDNHK---VRFLGNVN 76
Cdd:PRK12831 143 VAVIGSGPAGL-TCAGDLAK----MGYDVTIFEALHEPGGVLVYGI----PEFRlPKETVVKKEIENIKklgVKIETNVV 213
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  77 IGKDISLKQL--ESYYHSIVLsyGSTSADNK-LQVAGSDLPGVISARQF---VNWYNGHPDFYAT----GKKfvpppldq 146
Cdd:PRK12831 214 VGKTVTIDELleEEGFDAVFI--GSGAGLPKfMGIPGENLNGVFSANEFltrVNLMKAYKPEYDTpikvGKK-------- 283
                        170       180
                 ....*....|....*....|.
gi 150951211 147 iedVTIIGNGNVALDVARILL 167
Cdd:PRK12831 284 ---VAVVGGGNVAMDAARTAL 301
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
1-164 1.90e-10

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 63.12  E-value: 1.90e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAhHILSKCSdnmrINLDFFERLPAPFGLSRYGVAPDHPEvKNCEEYLENIMDNHKVRFLGNVNIGKD 80
Cdd:PRK12809 313 VAVIGAGPAGLGCA-DILARAG----VQVDVFDRHPEIGGMLTFGIPPFKLD-KTVLSQRREIFTAMGIDFHLNCEIGRD 386
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  81 ISLKQLESYYHSIVL---SYGSTSADnklqVAGSDLPGVISARQFVNWYNGHPDFYATGKKFvppPLDQIE--DVTIIGN 155
Cdd:PRK12809 387 ITFSDLTSEYDAVFIgvgTYGMMRAD----LPHEDAPGVIQALPFLTAHTRQLMGLPESEEY---PLTDVEgkRVVVLGG 459

                 ....*....
gi 150951211 156 GNVALDVAR 164
Cdd:PRK12809 460 GDTTMDCLR 468
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
1-164 2.65e-10

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 62.93  E-value: 2.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKcsdnmRINLDFFERLPAPFGLSRYGVapdhPEVKNCEEYLENIMDNHKV---RFLGNVNI 77
Cdd:PRK12779 309 IAVVGSGPSGLINAYLLAVE-----GFPVTVFEAFHDLGGVLRYGI----PEFRLPNQLIDDVVEKIKLlggRFVKNFVV 379
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  78 GKDISLKQLESY-YHSIVLSYGStSADNKLQVAGSDLPGVISARQF---VNWYNGHPDFYATgkkfvppPLDQIED--VT 151
Cdd:PRK12779 380 GKTATLEDLKAAgFWKIFVGTGA-GLPTFMNVPGEHLLGVMSANEFltrVNLMRGLDDDYET-------PLPEVKGkeVF 451
                        170
                 ....*....|...
gi 150951211 152 IIGNGNVALDVAR 164
Cdd:PRK12779 452 VIGGGNTAMDAAR 464
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
1-163 8.69e-10

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 60.00  E-value: 8.69e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFYTAHHILSKCSDnmrinLDFFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMD-------NHKV---- 69
Cdd:PRK12770  21 VAIIGAGPAGLAAAGYLACLGYE-----VHVYDKLPEPGGLMLFGIPEFRIPIERVREGVKELEEagvvfhtRTKVccge 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  70 ---RFLGNVNIGKDISLKQLESYYHSIVLSYGSTSAdNKLQVAGSDLPGVISARQFVNWYNGHPDFYATGKKfVPPPLDQ 146
Cdd:PRK12770  96 plhEEEGDEFVERIVSLEELVKKYDAVLIATGTWKS-RKLGIPGEDLPGVYSALEYLFRIRAAKLGYLPWEK-VPPVEGK 173
                        170
                 ....*....|....*..
gi 150951211 147 ieDVTIIGNGNVALDVA 163
Cdd:PRK12770 174 --KVVVVGAGLTAVDAA 188
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
1-164 1.29e-09

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 60.53  E-value: 1.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGfytahhiLSKCSDNMRINLD--FFERLPAPFGLSRYGVapdhPEVKNCEEYLENIMDNHK---VRFLGNV 75
Cdd:PRK12778 434 VAVIGSGPAG-------LSFAGDLAKRGYDvtVFEALHEIGGVLKYGI----PEFRLPKKIVDVEIENLKklgVKFETDV 502
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  76 NIGKDISLKQLES-YYHSIVLSYGStSADNKLQVAGSDLPGVISARQF---VNWYNGHPDFYATgkkfvppPLDQIEDVT 151
Cdd:PRK12778 503 IVGKTITIEELEEeGFKGIFIASGA-GLPNFMNIPGENSNGVMSSNEYltrVNLMDAASPDSDT-------PIKFGKKVA 574
                        170
                 ....*....|...
gi 150951211 152 IIGNGNVALDVAR 164
Cdd:PRK12778 575 VVGGGNTAMDSAR 587
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
1-165 1.14e-05

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 48.01  E-value: 1.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211    1 IAVVGTGPAGfytahhiLSKCSDNMRINLD--FFERLPAPFGLSRYGVAPDHPEVKNCEEYLENIMDnHKVRFLGNVNIG 78
Cdd:PRK12775  433 VAICGSGPAG-------LAAAADLVKYGVDvtVYEALHVVGGVLQYGIPSFRLPRDIIDREVQRLVD-IGVKIETNKVIG 504
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   79 KDISLKQL--ESYYHSIVLSYGStSADNKLQVAGSDLPGVISARQFVNWYNghpdfYATGKKF--VPPPLDQIEDVTIIG 154
Cdd:PRK12775  505 KTFTVPQLmnDKGFDAVFLGVGA-GAPTFLGIPGEFAGQVYSANEFLTRVN-----LMGGDKFpfLDTPISLGKSVVVIG 578
                         170
                  ....*....|.
gi 150951211  155 NGNVALDVARI 165
Cdd:PRK12775  579 AGNTAMDCLRV 589
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
1-164 1.52e-03

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 40.89  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211   1 IAVVGTGPAGFytahhilsKCSDNMR---INLDFFERLPAPFGLSRYGVapdhPEVKNCEEYL---ENIMDNHKVRFLGN 74
Cdd:PRK12769 330 VAIIGAGPAGL--------ACADVLArngVAVTVYDRHPEIGGLLTFGI----PAFKLDKSLLarrREIFSAMGIEFELN 397
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150951211  75 VNIGKDISLKQLESYYHSIVLSYGsTSADNKLQVAGSDLPGVisarqfvnwYNGHPDFYATGKKFVPPPLDQIE------ 148
Cdd:PRK12769 398 CEVGKDISLESLLEDYDAVFVGVG-TYRSMKAGLPNEDAPGV---------YDALPFLIANTKQVMGLEELPEEpfinta 467
                        170
                 ....*....|....*...
gi 150951211 149 --DVTIIGNGNVALDVAR 164
Cdd:PRK12769 468 glNVVVLGGGDTAMDCVR 485
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-47 6.32e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 38.78  E-value: 6.32e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 150951211   1 IAVVGTGPAGFYTAHHILSKCSDNMRINLdfFERLPaPFGLsryGVA 47
Cdd:COG4529    8 IAIIGGGASGTALAIHLLRRAPEPLRITL--FEPRP-ELGR---GVA 48
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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