|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
14-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 691.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 14 FKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMF 93
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 94 FICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAV 173
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 174 DNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCLLSPYLL 253
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 254 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQIMFWIMVV 333
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1509167435 334 VVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLIN 368
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-367 |
3.99e-125 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 366.04 E-value: 3.99e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 17 LNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFIC 96
Cdd:COG1290 23 LVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 97 IYLHVGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVD 174
Cdd:COG1290 103 VYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 175 NATLNRFFTFH-FVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEK----IPFHPYFTFKDLITIVLltsMLIMLCLLS 249
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV---FLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 250 PYL-LGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQI 326
Cdd:COG1290 260 FFFpINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTA 339
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1509167435 327 MFWIMVVVVILLTWIGKRPveEPYIMTGQILTIIYFIYFLI 367
Cdd:COG1290 340 LGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
12-209 |
5.79e-89 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 266.93 E-value: 5.79e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 12 PLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGAS 91
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 92 MFFICIYLHVGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWG 169
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1509167435 170 GFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSS 209
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
21-207 |
7.48e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.06 E-value: 7.48e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 21 LIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFICIYLH 100
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 101 VGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVDNATL 178
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1509167435 179 NRFFTFHFVLPFGIAAMAAIHLFFLHQTG 207
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
233-342 |
3.47e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.27 E-value: 3.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 233 ITIVLLTSMLIMLCLLSPYLLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN- 311
Cdd:TIGR01156 42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116
|
90 100 110
....*....|....*....|....*....|....*
gi 1509167435 312 ----KTPFRgiqfYPINQIMFWIMVVVVIlltWIG 342
Cdd:TIGR01156 117 vnkfQNPFR----RPVATTVFLFGTVVAL---WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
14-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 691.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 14 FKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMF 93
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 94 FICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAV 173
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 174 DNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCLLSPYLL 253
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 254 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQIMFWIMVV 333
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1509167435 334 VVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLIN 368
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
3-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 627.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLINVHVANSWDKLI 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
3-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 609.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
7-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 609.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 7 LRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLH 86
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 87 ANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQW 166
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 167 VWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLC 246
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 247 LLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQI 326
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1509167435 327 MFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
7-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 603.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 7 LRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLH 86
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 87 ANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQW 166
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 167 VWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLC 246
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 247 LLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQI 326
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1509167435 327 MFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
6-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 595.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 6 PLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTL 85
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 86 HANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQ 165
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 166 WVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIML 245
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 246 CLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQ 325
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1509167435 326 IMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
3-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 595.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLINVHVANSWD-KLIK 380
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEnKLLK 379
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
3-380 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 595.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLINVHVANSWDKLIK 380
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
6-367 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 551.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 6 PLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTL 85
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 86 HANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQ 165
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 166 WVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIML 245
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 246 CLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQ 325
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1509167435 326 IMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
3-381 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 522.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLINVHVANSWDKLIKI 381
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLNA 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
6-367 |
3.48e-179 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 502.69 E-value: 3.48e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 6 PLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTL 85
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 86 HANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQ 165
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 166 WVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIML 245
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 246 CLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQ 325
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1509167435 326 IMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
3-381 |
6.73e-175 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 491.91 E-value: 6.73e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 3 MNKPLRLKHPLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWII 82
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 83 RTLHANGASMFFICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGND 162
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 163 LVQWVWGGFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSML 242
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 243 IMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYP 322
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 323 INQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLINVHVANSWD-KLIKI 381
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEnKLLKL 380
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
19-369 |
1.43e-133 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 387.37 E-value: 1.43e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 19 NSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFICIY 98
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 99 LHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVDNATL 178
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 179 NRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCLLS--PYLLGDP 256
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 257 DNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQIMFWIMVVVVI 336
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350
....*....|....*....|....*....|....
gi 1509167435 337 LLTWIGKRPV-EEPYIMTGQILTIIYFIYFLINV 369
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLV 366
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-367 |
3.25e-131 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 380.05 E-value: 3.25e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 15 KILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFF 94
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 95 ICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVD 174
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 175 NATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTsMLIMLCLLSPYLLG 254
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 255 DPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNktpFRGIQFYPINQIMFWIMVVV 334
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1509167435 335 VILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-367 |
3.99e-125 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 366.04 E-value: 3.99e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 17 LNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFIC 96
Cdd:COG1290 23 LVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 97 IYLHVGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVD 174
Cdd:COG1290 103 VYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 175 NATLNRFFTFH-FVLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEK----IPFHPYFTFKDLITIVLltsMLIMLCLLS 249
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFV---FLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 250 PYL-LGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQI 326
Cdd:COG1290 260 FFFpINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTA 339
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1509167435 327 MFWIMVVVVILLTWIGKRPveEPYIMTGQILTIIYFIYFLI 367
Cdd:COG1290 340 LGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
12-209 |
5.79e-89 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 266.93 E-value: 5.79e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 12 PLFKILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGAS 91
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 92 MFFICIYLHVGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWG 169
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1509167435 170 GFAVDNATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSS 209
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
15-367 |
1.45e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 261.07 E-value: 1.45e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 15 KILNNSLIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFF 94
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 95 ICIYLHVGRGIYYGSYMYTHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVD 174
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 175 NATLNRFFTFHFVLPFGIAAMAAIHLFFLHQTGSSNPLGL-NGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCLLSPYLL 253
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 254 GDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSISILMILPFYNKTPFRGIqfypINQIMFWIMVV 333
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLIVS 317
|
330 340 350
....*....|....*....|....*....|....
gi 1509167435 334 VVILLTWIGKRPVEEPYIMTGQILTIIYFIYFLI 367
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
21-207 |
7.48e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.06 E-value: 7.48e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 21 LIDLPAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFICIYLH 100
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 101 VGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVDNATL 178
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1509167435 179 NRFFTFHFVLPFGIAAMAAIHLFFLHQTG 207
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
210-356 |
1.91e-48 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 160.89 E-value: 1.91e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 210 NPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCLLSPYLLGDPDNFIPANPLVTPVHIQPEWYFLFAYAILRSIPN 289
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1509167435 290 KLGGVIALFLSISILMILPFYNKTPFRGiQFYPINQIMFWIMVVVVILLTWIGKRPVEEPYIMTGQI 356
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
261-361 |
2.16e-44 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 148.78 E-value: 2.16e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 261 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTPFRGIQFYPINQIMFWIMVVVVILLTW 340
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1509167435 341 IGKRPVEEPYIMTGQILTIIY 361
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
91-256 |
5.76e-44 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 150.08 E-value: 5.76e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 91 SMFFICIYLHVGRGIYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVW 168
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 169 GGFAVDNATLNRFFTFHF-VLPFGIAAMAAIHLFFLHQTGSSNPLGLNGDIEKIPFHPYFTFKDLITIVLLTSMLIMLCL 247
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1509167435 248 LSPYLLGDP 256
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
25-212 |
1.83e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.54 E-value: 1.83e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 25 PAPTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFICIYLHVGRG 104
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 105 IYYGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVDNATLNRFF 182
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 1509167435 183 TFH-FVLPFGIAAMAAIHLFFLHQTGSSNPL 212
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
27-212 |
8.22e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 114.05 E-value: 8.22e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 27 PTNISFWWNFGSLLGMCLVIQIMTGLFLAMHYTSNIEMAFSSVIHICRDVNNGWIIRTLHANGASMFFICIYLHVGRGIY 106
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 107 YGSYMYTH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGNDLVQWVWGGFAVDNATLNRFFTF 184
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 1509167435 185 H-FVLPFGIAAMAAIHLFFLHQTGSSNPL 212
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
242-338 |
1.45e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 62.33 E-value: 1.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 242 LIMLCLLSPYLLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPF---YNK--TPFR 316
Cdd:CHL00058 51 NVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlenVNKfqNPFR 125
|
90 100
....*....|....*....|..
gi 1509167435 317 giqfYPINQIMFWIMVVVVILL 338
Cdd:CHL00058 126 ----RPVATTVFLIGTAVALWL 143
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
240-348 |
1.30e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.42 E-value: 1.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 240 SMLIMLCLLSPYLLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN-----KTP 314
Cdd:COG5679 50 ALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIEnvnkfQNP 124
|
90 100 110
....*....|....*....|....*....|....
gi 1509167435 315 FRgiqfYPINQIMFWIMVVVVILLTWIGKRPVEE 348
Cdd:COG5679 125 FR----RPVATAVFLFGTLVTLWLGIGAALPIDK 154
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
233-342 |
3.47e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.27 E-value: 3.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1509167435 233 ITIVLLTSMLIMLCLLSPYLLGDPdnfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYN- 311
Cdd:TIGR01156 42 VVILGTIACVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIEn 116
|
90 100 110
....*....|....*....|....*....|....*
gi 1509167435 312 ----KTPFRgiqfYPINQIMFWIMVVVVIlltWIG 342
Cdd:TIGR01156 117 vnkfQNPFR----RPVATTVFLFGTVVAL---WLG 144
|
|
|