|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 765.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 241 YGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 15079198 401 AITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILGITY 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 619.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 241 YGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 15079198 401 AITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILGI 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 602.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 241 YGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 15079198 401 AITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILGI 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
2.93e-179 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 509.11 E-value: 2.93e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFF-TDSLSSPLVVLSCWLLPLMMIA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 80 SQNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 160 LLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 240 GYGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 320 GLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 15079198 400 TAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFILG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
1.17e-156 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 451.32 E-value: 1.17e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 3 KILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNY-NSSFFTDSLSSPLVVLSCWLLPLMMIASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 82 NHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 162 VALLYLHNNIGSLHMLTISMMSTSMYpslSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 242 GIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 322 TSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTA 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 15079198 402 ITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
5.00e-145 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 422.08 E-value: 5.00e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLS-HNYNSSFFTDSLSSPLVVLSCWLLPLMMIA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 80 SQNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 160 LLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 240 GYGIMRMT-ILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLInLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 319 HGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 15079198 399 NTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-457 |
4.64e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 351.83 E-value: 4.64e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 37 ISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIASQNhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELI 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 117 MFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYpslSNSILW 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLS---SMGLWG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 197 FACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSIC 276
Cdd:MTH00150 156 LLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLIC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 277 LRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMC 356
Cdd:MTH00150 236 LRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 357 TWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHIL 436
Cdd:MTH00150 316 LWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
410 420
....*....|....*....|.
gi 15079198 437 MTLHLIPLLIISANPKFILGI 457
Cdd:MTH00150 396 LLLHWVPLLLLILKSDLLFMW 416
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-455 |
1.03e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 344.06 E-value: 1.03e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNStshsLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSL----LFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNHltKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00163 77 ESV--YKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLhmltisMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSL------SFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 241 YGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 15079198 401 AITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFIL 455
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
2.50e-108 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 328.24 E-value: 2.50e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTwLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00014 80 FK--IFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLHMLTISMMSTSMYPSlsnSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 241 YGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 15079198 401 AITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFI 454
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
28-454 |
3.83e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 311.91 E-value: 3.83e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 28 TSHSLTISVISLTLLYYNTDLSHNYNSSFFT-DSLSSPLVVLSCWLLPLMMIASQNHLtkESTNRKKTYLTMLIILQLSL 106
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSfDSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 107 IMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSM 186
Cdd:MTH00205 102 ILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSD 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 187 YpslSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSM 266
Cdd:MTH00205 182 F---YLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 267 WGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILAR 346
Cdd:MTH00205 259 WGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNK 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 347 GLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPI 426
Cdd:MTH00205 339 GVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSF 418
|
410 420
....*....|....*....|....*...
gi 15079198 427 KPSFTREHILMTLHLIPLLIISANPKFI 454
Cdd:MTH00205 419 LAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
2.19e-73 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 238.83 E-value: 2.19e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASqnhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QNeRLNAGLYFLFYTLAGSLPLLvallylhnnIGSLHMLTISMMSTSMYPSLSN--------SILWFACMTAFMVKMPLY 210
Cdd:COG1008 157 ER-RIYAAIKFFLYTLAGSLLML---------VAILALYFLAGALTFDIAELAAaplpltaqLLLFLAFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFII-LSMWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAaLGVIGIIYGALVALAQTDLKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 290 SVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLAL 369
Cdd:COG1008 307 SVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGL 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 370 PPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLitsQR---GKFTHHLHPIKPSFTREHILMTLHLIPLLI 446
Cdd:COG1008 387 PGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRELAVLAPLAALILL 463
|
410
....*....|..
gi 15079198 447 ISANPKFILGIT 458
Cdd:COG1008 464 LGLYPQPLLDLI 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-459 |
6.43e-67 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 221.74 E-value: 6.43e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASQnhltKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QNeRLNAGLYFLFYTLAGSLPLLVALLYLHNNIGslHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGLYFLGG--GTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 219 AHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFI-ILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 298 IIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 378 ELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSF-TREHILMTLHLIPLLIISANPKFILG 456
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLnGREIAVLAPLVVLILFLGLYPNPLLD 468
|
...
gi 15079198 457 ITY 459
Cdd:TIGR01972 469 LTE 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-458 |
2.97e-66 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 220.46 E-value: 2.97e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASqnhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QNeRLNAGLYFLFYTLAGSLPL----LVALLYLHNNIGSLHMLTIsmMSTSMYPSLSNsILWFACMTAFMVKMPLYGLHL 214
Cdd:PRK05846 157 KN-RIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADL--LNLPLPPGVQY-WLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFII-LSMWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 294 MGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 374 NLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKF 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
....*
gi 15079198 454 ILGIT 458
Cdd:PRK05846 473 LLDVI 477
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-401 |
4.72e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 211.02 E-value: 4.72e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 112 SSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 192 NSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSMWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 272 TSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLA-NTNYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 15079198 351 ILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTA 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
48-410 |
2.06e-59 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 202.22 E-value: 2.06e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 48 LSHNYNSSFFT-DSLSSPLVVLSCWLLPLMMIASQN---HLTKEstnrkktYLTMLIILQLSLIMAFSSSELIMFYVLFE 123
Cdd:MTH00204 70 LNFQWGPLVFAvDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 124 TTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMStsmYPSLSNSILWFACMTAF 203
Cdd:MTH00204 143 GILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLSIQKWLLVGFFLSL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFII-LSMWGMIMTSSICLRQTDL 282
Cdd:MTH00204 220 AVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDF 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 283 KSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLA 362
Cdd:MTH00204 300 KRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVL 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 15079198 363 SLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHM 410
Cdd:MTH00204 380 SLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
56-457 |
5.03e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 198.99 E-value: 5.03e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 56 FFTDSLSSPLVVLSCWLLPLMMIASQNHLTKEStnrkKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITR 135
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWHSVKYLT----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 136 WGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMmSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLW 215
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAS-CSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 216 LPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFII-LSMWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 295 GLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 375 LLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIISANPKFI 454
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFI 492
|
...
gi 15079198 455 LGI 457
Cdd:MTH00226 493 LEV 495
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
56-410 |
4.51e-56 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 193.34 E-value: 4.51e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 56 FFTDSLSSPLVVLSCWLLPLMMIASQN---HLTKEstnrkktYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIV 132
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 133 ITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFacmTAFMVKMPLYGL 212
Cdd:MTH00217 149 IGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFF---LSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFI-ILSMWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 292 SHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPP 371
Cdd:MTH00217 306 AHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350
....*....|....*....|....*....|....*....
gi 15079198 372 TINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHM 410
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
84-419 |
3.51e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 156.61 E-value: 3.51e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 84 LTKESTNRKKTYLTMLIILqlsLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLva 163
Cdd:MTH00094 56 LLSEKNFNLLILSNLLILI---CLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFL-- 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 164 llylhnnigSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGI 243
Cdd:MTH00094 131 ---------FVYLKNFFFFSLCYFDFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGF 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 244 MRMTILTQPItshLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTS 323
Cdd:MTH00094 202 LRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 324 SMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAIT 403
Cdd:MTH00094 279 TLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVS 358
|
330
....*....|....*.
gi 15079198 404 ALYSLHMLITSQRGKF 419
Cdd:MTH00094 359 FYYSLFLIVSSFMGKK 374
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-452 |
1.01e-40 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 152.11 E-value: 1.01e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASQNhltkeSTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFASWK-----VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QNeRLNAGLYFLFYTLAGSLPLLvallylhnnIGSLHM--------LTISMMSTSMYPSLSNSILWFACMTAFMVKMPLY 210
Cdd:PRK12561 133 QK-RLYAATKFILYTALASIFIL---------VAGLALalsgdtftFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPiTSHLYYP--FIILSMWGMIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLP-DAHVYFApaLAILGVVNIIYGALNAFAQDNVKRRLAY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 289 SSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLA 368
Cdd:PRK12561 282 SSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLA 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 369 LPPTINLLGELMVIVSSFSWSNFS-------IILLGLNTAITALYSLHML---ITSQRGKFTHHLHPIKPSFTREHILMT 438
Cdd:PRK12561 362 LPGMSGFVSELTVFLGITSSDVYSstfrtitILLAAVGLILTPIYLLSMLrrvFYGPRSELLPALAVVEDAKPRELFIAL 441
|
410
....*....|....
gi 15079198 439 LHLIPLLIISANPK 452
Cdd:PRK12561 442 SLLVPIIGIGFYPK 455
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-408 |
6.26e-40 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 148.37 E-value: 6.26e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 55 SFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKEStnRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVIT 134
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 135 RWGNQnERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFAcMTAFMVKMPLYGLHL 214
Cdd:COG0651 149 LGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALL-LVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIMRM--TILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVltLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 293 HMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPT 372
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350
....*....|....*....|....*....|....*.
gi 15079198 373 INLLGELMVIVSSFSWSNFSIILLGLNTAITALYSL 408
Cdd:COG0651 387 SGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYF 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
46-411 |
2.81e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 145.23 E-value: 2.81e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 46 TDLSHNYNSSffTDSLSSPLVVLSCwLLPLMMIASqnhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETT 125
Cdd:PRK06473 67 DSLGLSYHLG--VDGLSLPLLVLNS-LLTLIAIYS----SDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELE 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 126 LIPTLIVITRWGNQNeRLNAGLYFLFYTLAGSLPLLvallylhnnIGSLHMLTISMMSTSMY-PSLSNS-------ILWF 197
Cdd:PRK06473 140 LIPLYLLIAIWGGQR-RGYAATKFLLYTAISGILIL---------VSFLGLVWLSGASSFDYePLRSHTlplstqlLLLA 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 198 ACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFiiLSMWGMIMT---SS 274
Cdd:PRK06473 210 PILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygAS 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 275 ICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGL---QTI 351
Cdd:PRK06473 288 CAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERG 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 352 LPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHML 411
Cdd:PRK06473 368 LPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
107-457 |
7.00e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 133.15 E-value: 7.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 107 IMAFSSSELIMFYVLFETTLIPTLIVITRWGNQnERLNAGLYFLFYTLAGSLPLLVALLYL---HNNIGSLHMLTISMMS 183
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLANQS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 184 tsmYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPF-I 262
Cdd:CHL00011 205 ---YPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 263 ILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIhsRTM 342
Cdd:CHL00011 282 IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLV 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 343 ILAR--GLQTILPLMCTWWLLASLANLALPPTINLLGELMV---IVSSFSWSNFSIILLGLNTAI----TALYSLHMLIT 413
Cdd:CHL00011 360 YLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPKILITFVMAIgmilTPIYLLSMLRQ 439
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 15079198 414 SQRG-KFTHHLHP-IKPSFTREHILMTLHLIPLLIISANPKFILGI 457
Cdd:CHL00011 440 MFYGyKLFNVPNSyFFDSGPRELFISICILLPVIGIGIYPDFVLSL 485
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-423 |
5.66e-33 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 130.60 E-value: 5.66e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCwLLPLMMIASQNhltkESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNS-LLTWIAIYSIG----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QnERLNAGLYFLFYTlAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYT-AVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 219 AHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPfiILSMWGMIMT---SSICLRQTDLKSLIAYSSVSHMG 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 296 LVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTI---LPLMCTWWLLASLANLALPPT 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 15079198 373 INLLGELMVIVSSFSWSNFSIILLGLNTAITALYSLHMLITSQRGKFTHHL 423
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKL 439
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
58-411 |
1.98e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 129.06 E-value: 1.98e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 58 TDSLSSPLVVLSCWLLPLMMIASQnhltkESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWG 137
Cdd:PRK02546 85 ADGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 138 NQNeRLNAGLYFLFYTlAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLP 217
Cdd:PRK02546 160 GKK-RQYAATKFILYT-AGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 218 KAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYP-FIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGL 296
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 297 VIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLL 376
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 15079198 377 GELMVIV----SSFSWSNFSIILLGL---NTAITALYSLHML 411
Cdd:PRK02546 398 AELMVFVgfatSDAYTLPFRVVVVFLaavGVILTPIYLLSML 439
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
2.34e-26 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 102.60 E-value: 2.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFF-TDSLSSPLVVLSCWLLPLMMIA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLgIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 15079198 80 SQNHLTKESTNRKKTYLTMLIILQLSLIMA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-459 |
5.56e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 110.45 E-value: 5.56e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASQNHLTKESTNrkKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGP--EWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 139 QNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLS---------NSILWFACMT-AFMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTgglagnpplALGVALALALwAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 209 LYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRM-------TILTQPITSHLYYPFIILSMWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 282 LKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 362 ASLANLALPPTINLLGELMvIVSSFSWSNFSI--ILLGLNTAITALYSLHMLITSQRGKFTHHLHPIKpsftREHILMTL 439
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLL-LFNALLESGFYLpaLVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEH----KESPSMSV 473
|
410 420
....*....|....*....|
gi 15079198 440 HLIPLLIISanpkFILGITY 459
Cdd:PRK12667 474 VILVLALAV----LILGILA 489
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-457 |
2.93e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 93.02 E-value: 2.93e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 56 FFTDSLSSPLVVLScwLLPLMMIASQNHLTKESTNRKktYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPT--LIVI 133
Cdd:PRK08375 73 LRADSLSALFLLVT--SILAIAALLYAIGYGEHRQTR--FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSyaLVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 134 TRwgnQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILwfaCMTAFMVKMPLYGLH 213
Cdd:PRK08375 149 GG---DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGF---VLLALALKAAVFPLH 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSMW----GMIMTSSICLRQTDLKSLIAYS 289
Cdd:PRK08375 223 TWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLLAVlallSMLVGSLAALGQDDVKRVLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 290 SVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLAL 369
Cdd:PRK08375 303 TVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGV 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 370 PPTINLLGELMVIVSSFS-WSNFSIILLGLNTAITALYslhMLITSQRGKFTHHLHPIKPSFTREHILMTLHLIPLLIIS 448
Cdd:PRK08375 383 PPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY---FLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLS 459
|
....*....
gi 15079198 449 anpkFILGI 457
Cdd:PRK08375 460 ----LLLGI 464
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-405 |
3.39e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.99 E-value: 3.39e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILT-QPITSHLYYP-FIILSMWGMIMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdAAIGSDFPGRlLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 284 SLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLAS 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 15079198 364 LANLALPPTINLLGELMVIVSSFS---WSNFSIILLGLNTAITAL 405
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-339 |
2.97e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.60 E-value: 2.97e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 89 TNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITrWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLH 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 169 NNIGSLhmltiSMMSTSMYPSLSNSILwfacMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMti 248
Cdd:PRK07234 169 QANGTF-----AFSGLATADPEAFALI----ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC-- 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 249 ltQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMqsplsfmgATALMIAHGLTSSMLFC 328
Cdd:PRK07234 238 --ALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFL 307
|
250
....*....|.
gi 15079198 329 LANTNYERIHS 339
Cdd:PRK07234 308 CAGALPSRNFT 318
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
89-327 |
9.57e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.49 E-value: 9.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 89 TNRKKTYLTMLIILQLS-LIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERlnAGLYFLFYTLAGSLPLLVALLYL 167
Cdd:PRK08668 93 KTKNDAYFNMFALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRK--ASLKYFVLSAIGAYAMLYAIFLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 168 HNNIGSLhmlTISMMSTSMYPSLSNSILWFA---CMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYG-- 242
Cdd:PRK08668 171 YAKTGTF---DFADISQGLINDTSTGFALIVflfLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfl 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 243 -----IMRMTILTQPITSH----LYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGAT 313
Cdd:PRK08668 248 lvlyvLPGTKLFSEFGTYRgvplFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGL 327
|
250
....*....|....
gi 15079198 314 ALMIAHGLTSSMLF 327
Cdd:PRK08668 328 FHVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
200-327 |
2.07e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.09 E-value: 2.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 200 MTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMT-ILTQPITSHLYYPFII-LSMWGMIMTSSICL 277
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSaLLRQSGAAEQFSNVLIgLGIFSIAVAAFSML 292
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 15079198 278 RQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLF 327
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-407 |
3.24e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 71.69 E-value: 3.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 55 SFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKTYLTMLI-ILQLSLIMAFSSSELIMFYVLFETTLIPTLIVI 133
Cdd:PRK08667 72 TFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTaLFILSMLGVVASANTFSFLFFWEIMALSSFFLV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 134 TRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMltismmSTSMYPSLSNSILWFACMTAFMVKMPLYGLH 213
Cdd:PRK08667 152 MNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL------SPLGASAGILSLVFLLLFLGFGIKAGIIPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 214 LWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRmtILTQPITSHLYYPFIILS--MWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08667 226 KWLPYAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILLagSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 292 SHMGLVII-----------AALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWL 360
Cdd:PRK08667 304 ENIGIILMgiglyvifgvyGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFL 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 15079198 361 LASLANLALPPTINLLGELMVIVS---SFSWSNFSI-ILLGLNTAITALYS 407
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYESffqSFSVADPLIkILLFSVLAIFALTS 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-448 |
1.18e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.59 E-value: 1.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 2 LKILIPTFMLIPLTWLSKKP----WIWLNSTSHSLTISVISLTLLYYNTDLSHN-------YNSSFFTDSLSSPLVVLSC 70
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPiiqrYVALIGSLLTLVAAIILVANVYKHGIQTLElgnwkapFGIVFVADMFAALLVLTSS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 71 WLLPLMMIASQNHLTKEstnRKKTYLTMLIILQLS-LIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNErLNAGLYF 149
Cdd:PRK07691 88 IITFLVILYSFQTIGIE---RERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKY 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 150 LFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSN--SILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAG 227
Cdd:PRK07691 164 VLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGliTVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAI 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 228 SMVLAAILLKLGGYGIMRM-TILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSP 306
Cdd:PRK07691 244 AALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTE 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 307 LSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSF 386
Cdd:PRK07691 324 SGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15079198 387 SWSNFSIILLGLNTAITALYS-LHMLITSQRGKFTHHLHPIKPSFTRehilMTLHLIPLLIIS 448
Cdd:PRK07691 404 EAGFYVSGIIVLLSSLLVLYSvIKIFLKGFWGEPKGYDLNNKVPVKK----LLLPAVVLVAIT 462
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-353 |
3.60e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 68.20 E-value: 3.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 57 FTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKtYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRW 136
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDK-YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 137 GNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMsTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWL 216
Cdd:PRK08376 165 NDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVK-MSENPTVVAKIALALFIAGLAMKSGAVPVHMWL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 217 PKAHVEAPIAGSMVLAAIllKLGG-YGIMRM--TILTQPI-TSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK08376 244 PDAYPAAPSSISAMLLVI--KQAGlYALARVlfSIYGPAInLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 15079198 293 HMGLVI------IAALMQSPLSFMGATAL------MIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILP 353
Cdd:PRK08376 322 QIGYMLlglgvgLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP 394
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
75-408 |
1.02e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 66.71 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 75 LMMIASQNHLTKESTNRkktYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIpTLIVITRWGNQNERLNAGLYFLFYTL 154
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDK---YAMLFLLLMLGATGMIATGDIFNLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGG 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 155 AGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSnsILWFACMT-AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAA 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVA--QVGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITVMFSA 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 234 ILLKLGGYGIMRMTILTQPIT--SHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMG 311
Cdd:PRK08377 247 FVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 312 ATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLmctwwllaslanLALPPTINLLGELMVIVSSFSWSNF 391
Cdd:PRK08377 327 GVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPL------------TALALTIGALSTVGIPLFNVFWSKF 394
|
330
....*....|....*..
gi 15079198 392 SIILLGLNTAITALYSL 408
Cdd:PRK08377 395 RIILAGLSAGYTWPVAL 411
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
94-327 |
8.56e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 63.83 E-value: 8.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 94 TYLtmliILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRwGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGS 173
Cdd:PRK12665 116 TYL----ILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 174 LHMLTISMMSTSMyPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPi 253
Cdd:PRK12665 191 LNMADLAVRLDEL-PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP- 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 15079198 254 TSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12665 269 GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF 342
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-354 |
4.23e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.86 E-value: 4.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 213 HLWLPKAhVEAPIAGSMVL-AAILLKLGGYGIMRMTiltqPITSHLYYPFIILSMWG---MIMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLN----PVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15079198 289 SSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPL 354
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPI 355
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
52-395 |
1.01e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 60.32 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 52 YNSSFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKEStnrkktyLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLI 131
Cdd:MTH00062 37 FNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVS-------RFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 132 VITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISmmSTSMYPSLSNSILWFacmtAFMVKMPLYG 211
Cdd:MTH00062 110 LLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWG--SDDSVSLIVYYVLSF----MFITKVPLFP 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 212 LHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLrqtDLKSLIAYSSV 291
Cdd:MTH00062 184 FHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 292 SHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPP 371
Cdd:MTH00062 261 SHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPP 340
|
330 340
....*....|....*....|....
gi 15079198 372 TINLLGELMVIVSSFSWSNFSIIL 395
Cdd:MTH00062 341 TIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
83-448 |
3.62e-09 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 58.83 E-value: 3.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 83 HLTKESTNRKKTYLTMLIILQLSLIMafsSSELIMFYVLFETTLIPTLIVITRWGNQnERLNAGLYFLFYTLAGSLPLLV 162
Cdd:PRK06525 106 HPVHEGTGRYYAFLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 163 ALLYLHNNIGSLHMLTISMMSTSMypslsNSILWFACMTAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGY 241
Cdd:PRK06525 182 AAATLFLQTGTFALSALSGLHGSL-----KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVY 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 242 GIMRMTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIA---ALMQSPLSFMGATALMIA 318
Cdd:PRK06525 256 IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGlslAILGSRLALEGSIAYIFN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 319 HGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGL 398
Cdd:PRK06525 336 HAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 15079198 399 nTAITALYSLHMLITSQrgKFTHHLHPIKPSFTREHI-----LMTLHLIPLLIIS 448
Cdd:PRK06525 416 -MVLLLIESVASFAWFL--RWFGRVVFGEPSEAVADAaplpgSMKLVLIVLIVMS 467
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
4-408 |
5.97e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 58.04 E-value: 5.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 4 ILIPTFMLIPLTWLSKK---PWIWLNSTSHSLTISVISLTLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIAS 80
Cdd:TIGR01770 11 LLGAFILLLYGLFYSRKkrnPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 81 QNHLTKESTNRKKTYLTMLIILqLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPL 160
Cdd:TIGR01770 91 LSYLSKEKINKFEFYILLLFAL-LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 161 LVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACM-TAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAaILLKLG 239
Cdd:TIGR01770 170 LFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLLGIVLIlVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 240 GYGI-MRMTILTQPITSHLYYPFI-ILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAAL------MQSPLSFMG 311
Cdd:TIGR01770 249 IFAVfLRLFLYILFGFSEAWQIFLaIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLagtlegIKAVLFYIF 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 312 ATALMIAHGLTSSMLfcLANTNYERIHSrtMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSNF 391
Cdd:TIGR01770 329 IYALMSLGAFGVLSL--LRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLY 404
|
410
....*....|....*...
gi 15079198 392 SIILLG-LNTAITALYSL 408
Cdd:TIGR01770 405 WLAVIAvLTSVIGAFYYL 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-336 |
1.45e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 56.75 E-value: 1.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 51 NYNSSFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTL 130
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 131 IVITrWGNQNERLNAGLYFL-FYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSmypslsNSILWFACMTAFMVKMPL 209
Cdd:PRK06589 154 FLIG-HTRNNISLSGGYKYLkILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKN------QSIILLLMFIYGIAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 210 YGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMR-------MTILTQPITSHLYYPFIilSMWGMIMTSSICLRQTDL 282
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFI--PIVSIFYSSLKALKTDNI 304
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 15079198 283 KSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYER 336
Cdd:PRK06589 305 KKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSL 358
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
212-327 |
2.13e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 56.86 E-value: 2.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 212 LHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGIMRMTiltqPITSHL---YYPFIILSMWGMIMTSSICLRQTDLKSLIA 287
Cdd:PRK12644 222 FHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA----PGFADVpvwRPTVLVLGLATMLLGGWRALRQHDLKLILA 296
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 15079198 288 YSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 297 YGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
213-330 |
2.49e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.59 E-value: 2.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITShLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
90 100 110
....*....|....*....|....*....|....*...
gi 15079198 293 HMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12650 307 QLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
212-448 |
4.22e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 55.54 E-value: 4.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 212 LHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGIMRMtiltQPI---TSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIA 287
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARL----SPLfalSPVWLTVVAIIGAITALFAALIALAQTDIKRVLA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 288 YSSVSHMGLVIIAALMQsplSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLmcTWWLLASLANL 367
Cdd:COG1009 305 YSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPI--TAITFLIGALS 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 368 AL--PPTINLLGELMVIVSSFSWSNFSIILLGLNT---AITALYSLHMLI----TSQRGKFTHHLHPIKPsftrehiLMT 438
Cdd:COG1009 380 LAgiPPFAGFFSKEAILEAALEAGGLGPLLLAVALlgaFLTAFYSFRLFFlvffGKPRPKTPKHPHESPW-------LMT 452
|
250
....*....|
gi 15079198 439 LHLIPLLIIS 448
Cdd:COG1009 453 LPLVVLAVLS 462
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
23-323 |
7.71e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 54.35 E-value: 7.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 23 IWLNSTSHSLT--ISVISL------TLLYYNTDLSHNYNSSFFTDSLSSPLVVLSCWLLPLMMIASQNHLTKESTNRKKT 94
Cdd:COG1007 25 LFLPRRSRRLLagLALLGLllalalLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 95 YLTMLIILqLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGL-YF---------------LFYTLAGSl 158
Cdd:COG1007 105 YALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllgalssgfllygisLLYGATGS- 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 159 pllvallylhnnigslhmLTISMMSTSMYPSLSNSILWFACM----TAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
Cdd:COG1007 183 ------------------LNLAGIAAALAAGGANSPLLLLGLvlvlAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 235 LlKLGGYGI-MR-MTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGA 312
Cdd:COG1007 245 P-KIAAFAAlLRlLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAA 323
|
330
....*....|.
gi 15079198 313 TALMIAHGLTS 323
Cdd:COG1007 324 LFYLLAYLFMN 334
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
55-408 |
8.19e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.57 E-value: 8.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 55 SFFTDSLSSPLVVLSCWLLPLMMIASQNhlTKESTNRKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVIT 134
Cdd:PRK12663 72 QFTGDSLSALMVTTASFVATAIMAYGFG--DIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 135 rWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHl 214
Cdd:PRK12663 150 -LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM- 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 215 WLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPFI-ILSMWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK12663 228 WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLaTMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 294 MGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTI 373
Cdd:PRK12663 308 IGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFS 387
|
330 340 350
....*....|....*....|....*....|....*
gi 15079198 374 NLLGELMVIVSSFSWSNFSIILLGLNTAITALYSL 408
Cdd:PRK12663 388 GFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-342 |
1.09e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.12 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 117 MFYVLFET-TLIPTLIVITrwgNQNERLN--AGLYFLFYTLAGSLPLLVALLYLHNNIGSLhmlTISMMSTSMYPSLSNS 193
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSY---DFAAMRAAHLSPFWAS 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 194 ILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTI-LTQPITSHLYYPFIILSMWGMIMT 272
Cdd:PRK06521 211 LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLG 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 273 SSICLRQTDLKSLIAYSSVSHMGLVIIA--------ALMQSPLSFMGATALM---IAHGLTSSMLFCLANTNYERIHSRT 341
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGlglamvfiAYGMPLLAALALTAALyhlLNHALFKSLLFLGAGAVLHATGTRD 370
|
.
gi 15079198 342 M 342
Cdd:PRK06521 371 M 371
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-330 |
2.79e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 52.81 E-value: 2.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 1 MLKILIPTFMLIPLTWLSKKPWIWLNSTSHSLTISVISLTLL----------YYNTDLSHNYNSSFFTDSLSSPLVVLSC 70
Cdd:PRK12662 7 ILQVIIPLLSAVVCALLKNRKLVKIISCIVVAVSFFIALVLFvqvysggvikYSLGGWGPPYGIELRVDILSATMLVLVN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 71 WLLPLMMIASQNHLTKESTNRKKTYLTMLIILQLS-LIMAFSSSELIMFYVLFETTLIPTLIVITRwGNQNERLNAGLYF 149
Cdd:PRK12662 87 FIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGgLLGILVSNDVFNIYVFLEISSISSYVLVAM-GRDKKALVAAFEY 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 150 LFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSM 229
Cdd:PRK12662 166 LIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISV 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 230 VLAAILLKLGGYGIMRM--TILTQP---ITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQ 304
Cdd:PRK12662 246 FFSGTSTKVMIYLIIRIvyDVFKANfvfTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLN 325
|
330 340
....*....|....*....|....*.
gi 15079198 305 SPLSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12662 326 TYYGLAAAVAYIVNHSIVKSALFMVS 351
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
83-447 |
4.27e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.45 E-value: 4.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 83 HLTKESTNRKKTYLtMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLV 162
Cdd:PRK12646 101 YLSSRKDNLPRFYF-YLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLV 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 163 ALLYLH-----NNIGSLHMLTISMMSTSMYPSLSNSILwfacMTAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILL 236
Cdd:PRK12646 180 GFIMLYimtgtNNITEILGQADHIKNHGLFIPMIFMFL----LGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 237 KLGGYGIMRMTILTQpITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVII-----AALMQSP----- 306
Cdd:PRK12646 254 KAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQqdaia 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 307 ----LSFMGATALMIAHGLTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMV- 381
Cdd:PRK12646 333 siyvFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFl 412
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15079198 382 --IVSSFSWSNFSIILLGLNTAI-------TALYSLHMLITSQRGKFTHHLHPIKPsfTREHILMTLHLIPLLII 447
Cdd:PRK12646 413 daLTQTGQLSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGKYDSKVFTKKN--IHEPWLFSLPSLILMVL 485
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-330 |
6.80e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 51.75 E-value: 6.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 53 NSSFFTDSLSSPLVVLSCWLLPLMMIASQNHL-TKESTNRKKTYLtmLIILQLSLIMAFSSSELIMFyVLFETTLIPTLI 131
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMsHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFM 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 132 VITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTIsMMSTSMYPSLSNSILWFACMTAFMV----KM 207
Cdd:PRK12649 150 LIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATI-LQDSELIENIKGHPLFLITLILIFIgaaaKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 208 PLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGIMRMtiltQPITSHLYYPFIILS---MWGMIMTSSICLRQTDLK 283
Cdd:PRK12649 229 AQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI----HPIFSGTEAWFILVSgtgMITMVLAGFLAFRQTDIK 303
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 15079198 284 SLIAYSSVSHMGLVII----AALMQSPLSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12649 304 AILAYSTISQLAYLMTmygyTTYHEPGLGVAAATFHLLNHATFKACLFLVA 354
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
172-390 |
4.62e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 49.06 E-value: 4.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 172 GSLHMLTISMMSTSMypsLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQ 251
Cdd:PRK08042 162 GTLDLRLLDMRMQQL---PLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 252 PITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIA--------ALMQSPL---SFMGATALMIAHG 320
Cdd:PRK08042 239 NAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGlgagvtgiALEQPALialGLVGGLYHLLNHS 318
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 321 LTSSMLFCLANTNYERIHSRTMILARGLQTILPLMCTWWLLASLANLALPPTINLLGELMVIVSSFSWSN 390
Cdd:PRK08042 319 LFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSN 388
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
213-323 |
1.12e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.43 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 213 HLWLPKAHVEAPIAGSMVLAAILlKLGGYGI-MR-MTILTQPITSHLYYPFIILSMWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRlLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|...
gi 15079198 291 VSHMGLVIIAALMQSPLSFMGATALMIAHGLTS 323
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
174-327 |
1.15e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.50 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 174 LHMLTISMMSTSMYPSLSNSILWFAcMTAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMtiltqpi 253
Cdd:PRK12668 165 LHYAETGSFAFGAIAGLGGTAAWLI-LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA------- 236
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15079198 254 tshlyYP-FIILSMWGMIMT---SSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 237 -----FPgTELLIYIGAAMAvygVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
203-300 |
3.55e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 3.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 203 FMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAILLKLGGYGIMRMTILTQPItSHLYYPFIILSMWGM--IMTSSICLR 278
Cdd:PRK06459 168 FIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTI-PIGYFGLTILAIGAFsiLFGALYAYV 246
|
90 100
....*....|....*....|..
gi 15079198 279 QTDLKSLIAYSSVSHMGLVIIA 300
Cdd:PRK06459 247 SENVKGLLAFSTIENNGAILVA 268
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
212-327 |
6.24e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 42.20 E-value: 6.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 212 LHLWLPKAhVEAPIAGSMVLAAILLKLGGYGIMRMTILTQ--PITSHLyypFIILSMWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:PRK07390 240 LHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLAlsPVALTV---LIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
90 100 110
....*....|....*....|....*....|....*...
gi 15079198 290 SVSHMGLVIIAALMQSPLSfmgATALMIAHGLTSSMLF 327
Cdd:PRK07390 316 TSAYLGLVFIAVGLQQPDI---ALLLLLTHAIAKALLF 350
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
204-300 |
6.48e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 42.32 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 204 MVKMPLYGLHLWLPKAhVEAPI-------AGSMVLAAILLklggygIMRMtiltQPITSHLYYPFIILSMWGMI---MTS 273
Cdd:PRK07376 238 MAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPAVMTVIAWTGAItafLGA 306
|
90 100
....*....|....*....|....*..
gi 15079198 274 SICLRQTDLKSLIAYSSVSHMGLVIIA 300
Cdd:PRK07376 307 SIALTQNDIKKGLAYSTISQLGYMVMA 333
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
104-327 |
6.68e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.94 E-value: 6.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 104 LSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGL-YFLFYTLAgSLPLLVALLYLHNNIGSLHMLTISMM 182
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALS-SGLFLFGCALLCGTTGGLHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 183 --STSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPKAHVEAPIAgSMVLAAILLKLGGYGIMRMTILTQPItshlyyp 260
Cdd:MTH00196 83 lnSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTK-TTALLAIVPKLGIFSILVSIGLNVNI------- 154
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15079198 261 FIILSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 155 LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-299 |
1.45e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 41.10 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 59 DSLSSPLVVLSCWLLPLMMIASQNHLTKES-TNRKKTYLTMLIILQLSLImafSSSELIMFYVLFETTLIPTLIVITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 138 NQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTIS-------MMSTSMYPSLSNSILW--FACMTAFMV--- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgIMDRGYYGGGAYESPLapFAIIGILLLigc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 206 --KMPLYGLHLWLPKAhVEAPIAGSMVLAAILLKLGGYGIMrmtILTQPITSHLYYPFIILSMWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250
....*....|....*....
gi 15079198 281 DLKSLIAYSSVSHMGLVII 299
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVL 330
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
200-330 |
2.25e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.22 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 200 MTAFMVKMPLYGLHLWLPKAHVEA--PIAGsmvLAAILLKLGGYGIMRMTIL----TQPITSHLYYPFIIlsmWGMIMTS 273
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLlfgpEAGASAGFGQDWLL---PGGLATL 290
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15079198 274 SI----CLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 291 AFgaigVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
31-300 |
4.60e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.57 E-value: 4.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 31 SLTISVISLTLLYYNTDLSHNYNSSFFTDSLSspLVVLSCWLLPLMMIASQNHLTKESTNRKKTYLTMLIILQLSLIMAF 110
Cdd:MTH00208 78 LLGCPNINISLSNWLSNTLFNFSLSFIFDFYF--ILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 111 SSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNNIGSLHMLTISMMSTSmyPSL 190
Cdd:MTH00208 156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNS--NSF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 191 SNSILWFACMTAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygIMRMTILTQPITSHLYYPFII 263
Cdd:MTH00208 234 LINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISNSPWFLSLCLIL 306
|
250 260 270
....*....|....*....|....*....|....*..
gi 15079198 264 LSMWGmIMTSSICLRQTDLKSLIAYSSVSHMGLVIIA 300
Cdd:MTH00208 307 GSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVA 342
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
185-300 |
4.79e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.29 E-value: 4.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 185 SMYPSLSNSILWFACMTAF---MVKMPLYGLHLWLPKAhVEAPIAGS-MVLAAILLKLGGYGIMRMTILTQPITSHLYYP 260
Cdd:MTH00020 199 NMVVSAPSSDITLICLFLFigaVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPLFEQAPLALIIV 277
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 15079198 261 FIILSMwGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIA 300
Cdd:MTH00020 278 TIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVA 316
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
213-298 |
6.37e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.14 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 213 HLWLPKAhVEAPIAGSMVL-AAILLKLGGYGIMRMTiltqPITSHLYYPFIILSMWGMIM---TSSICLRQTDLKSLIAY 288
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT----PIFAGSQVWFWTVTLVGLITlfwGSLNAVKQTDLKGILAF 304
|
90
....*....|
gi 15079198 289 SSVSHMGLVI 298
Cdd:PRK12645 305 STVSQLGLIM 314
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
102-406 |
9.23e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.22 E-value: 9.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 102 LQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSlpllvallylhnnigslhMLTISM 181
Cdd:MTH00011 15 MTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSG------------------LLLLGM 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 182 MSTSMYPSLSNSILWFACMTAFMVKMPLYGLHLWLPkaHVEAPIagSMVLAAILLKLGGYGIMRMTILTQPITSHLYYPF 261
Cdd:MTH00011 77 TMMWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFP--SVMSSI--SWTLCLILSTWQKIAPLSILFFFTSHNILPMMTS 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 262 IilSMWGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIAALMQSPLSFMGATALMIahgLTSSMLFCLANTNYERIHSRT 341
Cdd:MTH00011 153 M--AAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYII---ITTPLMLLFAYLNAFSTKFNS 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15079198 342 MILARGLQTILPLMctwwlLASLANLALPPTINLLGELMVIVSSFSWSNFSIILLGLNTAITALY 406
Cdd:MTH00011 228 KISSMSQTTSMSLF-----IMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLF 287
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
91-327 |
9.34e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 38.39 E-value: 9.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 91 RKKTYLTMLIILQLSLIMAFSSSELIMFYVLFETTLIPTLIVITRWGNQNERLNAGLYFLFYTLAGSLPLLVALLYLHNN 170
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLN 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 171 IGSLHMLTISMMSTSMYPSLsnsilwFACMTAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygI 243
Cdd:MTH00211 188 LNSWEISQLFILNLDLTLFL------LGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------L 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15079198 244 MRMTILTQPITSHLYYPFIILSMwGMIMTSSICLRQTDLKSLIAYSSVSHMGLVIIA-ALMQSPLSFMgataLMIAHGLT 322
Cdd:MTH00211 255 IRLSPLFQNNQLILGAVLLLGAL-TMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTlGLNQPQLAFL----HICTHAFF 329
|
....*
gi 15079198 323 SSMLF 327
Cdd:MTH00211 330 KAMLF 334
|
|
| |
