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Conserved domains on  [gi|1498901563|gb|RML98212|]
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Malto-oligosyltrehalose trehalohydrolase [Pseudomonas savastanoi]

Protein Classification

alpha-glucosidase; alpha-amylase family glycosyl hydrolase( domain architecture ID 10571433)

alpha-glucosidase catalyzes the hydrolysis of terminal, non-reducing, alpha-glucosidic linkages of oligosaccharides to produce alpha-glucose; alpha-amylase family glycosyl hydrolase functions as a glycoside hydrolase that may act on starch, glycogen, and related oligo- and polysaccharides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3459 pfam11941
Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. ...
 2-86 6.28e-22

Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 110 amino acids in length. This domain is found associated with pfam00128, pfam02922.


:

Pssm-ID: 432205 [Multi-domain]  Cd Length: 92  Bit Score: 81.99  E-value: 6.28e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498901563   2 LALRHKEIVPRLPGARF--LKTDILGDKAVSARWVLGDGSELRIDLNLSEQAVDAPPQKNARQIFSSAAKSSELsPQAIL 79
Cdd:pfam11941   6 LALRREHIVPRLADARLggVRVTVLGPGALLVRWRLGDGGDLRLAANLGDEPVALPPGAAGEVLFASGPARAGL-GGGRL 84


                  ....*..
gi 1498901563  80 NPYTAIV 86
Cdd:pfam11941  85 PPWSVVV 91
 
Name Accession Description Interval E-value
DUF3459 pfam11941
Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. ...
 2-86 6.28e-22

Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 110 amino acids in length. This domain is found associated with pfam00128, pfam02922.


Pssm-ID: 432205 [Multi-domain]  Cd Length: 92  Bit Score: 81.99  E-value: 6.28e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498901563   2 LALRHKEIVPRLPGARF--LKTDILGDKAVSARWVLGDGSELRIDLNLSEQAVDAPPQKNARQIFSSAAKSSELsPQAIL 79
Cdd:pfam11941   6 LALRREHIVPRLADARLggVRVTVLGPGALLVRWRLGDGGDLRLAANLGDEPVALPPGAAGEVLFASGPARAGL-GGGRL 84


                  ....*..
gi 1498901563  80 NPYTAIV 86
Cdd:pfam11941  85 PPWSVVV 91
 
Name Accession Description Interval E-value
DUF3459 pfam11941
Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. ...
 2-86 6.28e-22

Domain of unknown function (DUF3459); This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 110 amino acids in length. This domain is found associated with pfam00128, pfam02922.


Pssm-ID: 432205 [Multi-domain]  Cd Length: 92  Bit Score: 81.99  E-value: 6.28e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498901563   2 LALRHKEIVPRLPGARF--LKTDILGDKAVSARWVLGDGSELRIDLNLSEQAVDAPPQKNARQIFSSAAKSSELsPQAIL 79
Cdd:pfam11941   6 LALRREHIVPRLADARLggVRVTVLGPGALLVRWRLGDGGDLRLAANLGDEPVALPPGAAGEVLFASGPARAGL-GGGRL 84


                  ....*..
gi 1498901563  80 NPYTAIV 86
Cdd:pfam11941  85 PPWSVVV 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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