NCBI Conserved Domain Search

Conserved domains on [gi|149729233|gb|ABR28139|]

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NADH dehydrogenase subunit 2 (mitochondrion) [Aplonis brunneicapillus]

Protein Classification

NADH dehydrogenase subunit 2( domain architecture ID 11475904)

NADH dehydrogenase subunit 2 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

ND2

MTH00112

NADH dehydrogenase subunit 2; Provisional

1-346

1.33e-169

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 475.47 E-value: 1.33e-169

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00112   1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00112  81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320

                        330       340
                 ....*....|....*....|....*.
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTLV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346

Name

Accession

Description

Interval

E-value

ND2

MTH00112

NADH dehydrogenase subunit 2; Provisional

1-346

1.33e-169

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 475.47 E-value: 1.33e-169

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00112   1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00112  81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320

                        330       340
                 ....*....|....*....|....*.
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTLV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346

NuoN

COG1007

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...

7-283

5.73e-30

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase

Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 119.07 E-value: 5.73e-30

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   7 LIFATsllLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLF-SSMTNAwQTGQW 84
Cdd:COG1007  108 LLFAT---LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSL 183

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  85 DITQL-----TCPMSSTILTAAISM-------KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMK----FPPITLLFMTSQS 148
Cdd:COG1007  184 NLAGIaaalaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPG 263

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 149 LNP---TLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLAL--LNFYL--YVMMTAAVFLTLDS 221
Cdd:COG1007  264 LAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILL 343

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149729233 222 IK-----TLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIA 283
Cdd:COG1007  344 LSrkggeAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAV 410

Proton_antipo_M

pfam00361

Proton-conducting membrane transporter; This is a family of membrane transporters that ...

23-268

1.24e-26

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.

Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 107.01 E-value: 1.24e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   23 SNHWIMAWAGLELNTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQL-----TCPMSST 96
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   97 ILTAAISM------KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPT------LLTSMAILSAAL 164
Cdd:pfam00361  81 LLLLFLLIlvgflfKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  165 GGWMGLNQTQTRKILAFSSISHLGWMAIII----IYCPKLALLNFYLYVMMTAAVFLTLDSI-----KTLKLSTLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240

                         250       260       270
                  ....*....|....*....|....*....|...
gi 149729233  236 KTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273

NDH_I_N

TIGR01770

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...

14-282

2.49e-22

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]

Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 97.33 E-value: 2.49e-22

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   14 LLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   93 MSSTILT------------AAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMK---FPPITLLFMTSQSLNPTLLTSM 157
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFGFSEAWQIF 271

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  158 ----AILSAALGGWMGLNQTQTRKILAFSSISHLGWmAIIIIYCPKLAL---LNFYL--YVMMTAAVFLTLDSIKTLK-- 226
Cdd:TIGR01770 272 laiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGY-ILIGLLAGTLEGikaVLFYIfiYALMSLGAFGVLSLLRSYKde 350

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  227 ----LSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATII 282
Cdd:TIGR01770 351 wieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIA 410

Name

Accession

Description

Interval

E-value

ND2

MTH00112

NADH dehydrogenase subunit 2; Provisional

1-346

1.33e-169

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 475.47 E-value: 1.33e-169

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00112   1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00112  81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320

                        330       340
                 ....*....|....*....|....*.
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTLV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346

ND2

MTH00070

NADH dehydrogenase subunit 2; Provisional

1-345

6.62e-138

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 395.06 E-value: 6.62e-138

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00070   1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00070  81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320

                        330       340
                 ....*....|....*....|....*
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTL 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345

ND2

MTH00135

NADH dehydrogenase subunit 2; Provisional

1-346

3.18e-137

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 393.40 E-value: 3.18e-137

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00135   1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSlNPTLLTSMAIL 160
Cdd:MTH00135  81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319

                        330       340
                 ....*....|....*....|....*..
gi 149729233 321 VNTT-VSVLVTMSITLLPLSPLILTLV 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346

ND2

MTH00105

NADH dehydrogenase subunit 2; Provisional

1-345

4.67e-120

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 349.91 E-value: 4.67e-120

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00105   1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00105  81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPhTTNHMK-QW-YTN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWqFEN 319

                        330       340
                 ....*....|....*....|....*..
gi 149729233 319 KPVNTTVSVLVTMSITLLPLSPLILTL 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346

ND2

MTH00200

NADH dehydrogenase subunit 2; Provisional

1-345

4.00e-99

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.49 E-value: 4.00e-99

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00200   1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00200  81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320

                        330       340
                 ....*....|....*....|....*
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTL 345
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFL 345

ND2

MTH00041

NADH dehydrogenase subunit 2; Validated

1-345

3.56e-84

NADH dehydrogenase subunit 2; Validated

Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 258.71 E-value: 3.56e-84

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ 80
Cdd:MTH00041   1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAIL 160
Cdd:MTH00041  81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWYTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320

                        330       340
                 ....*....|....*....|....*...
gi 149729233 321 VN---TTVSVLVTMSITLLPLSPLILTL 345
Cdd:MTH00041 321 ITvygVILSILSSISILGLLLIPLFLSF 348

ND2

MTH00160

NADH dehydrogenase subunit 2; Provisional

1-345

9.63e-61

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 197.74 E-value: 9.63e-61

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   1 MNPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWq 80
Cdd:MTH00160   2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 tgqwdITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTsqsLNPTLLTSMAIL 160
Cdd:MTH00160  81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIALLSLLSLFFYLRLAYCATITLppHTTNHMKQWYTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310

                        330       340
                 ....*....|....*....|....*
gi 149729233 321 VNTTVSVLVTMSITLLPLSPLILTL 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335

ND2

MTH00011

NADH dehydrogenase subunit 2; Validated

7-275

4.25e-49

NADH dehydrogenase subunit 2; Validated

Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.65 E-value: 4.25e-49

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   7 LIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSmtnawqTGQWDI 86
Cdd:MTH00011   9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  87 TQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTSMAILSAALGG 166
Cdd:MTH00011  83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 167 WMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPALSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242

                        250       260
                 ....*....|....*....|....*....
gi 149729233 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSM 271

ND2

MTH00144

NADH dehydrogenase subunit 2; Provisional

5-275

8.88e-48

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 163.90 E-value: 8.88e-48

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   5 AKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQW 84
Cdd:MTH00144   5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  85 DitqltcpmSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNP-TLLTSMAILSAA 163
Cdd:MTH00144  85 F--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 164 LGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLdSIKTLKLSTLMTTWTKTPALSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL-WSGDSGSMKDLGSLKPSYKTGLS 235

                        250       260       270
                 ....*....|....*....|....*....|..
gi 149729233 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267

ND2

MTH00197

NADH dehydrogenase subunit 2; Provisional

8-270

2.88e-39

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 141.35 E-value: 2.88e-39

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   8 IFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTgqwdit 87
Cdd:MTH00197   2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  88 qLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLfmTSQSLNPTLLTSMAILSAALGGW 167
Cdd:MTH00197  76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 168 MGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPALSAMLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232

                        250       260
                 ....*....|....*....|...
gi 149729233 248 LLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSL 255

ND2

MTH00196

NADH dehydrogenase subunit 2; Provisional

13-267

3.74e-30

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.82 E-value: 3.74e-30

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  13 LLLGSTITISSNHWIMAWAGLELNTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLVLFS-------------SMTNA 78
Cdd:MTH00196   2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  79 WQTGQWDITQLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFmtSQSLNPTLLTSMA 158
Cdd:MTH00196  82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 159 ILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIII----IYCPKLALLNFYLYVMMTAAVFLTLDSIKTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239

                        250       260       270
                 ....*....|....*....|....*....|....*
gi 149729233 233 TWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274

NuoN

COG1007

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...

7-283

5.73e-30

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase

Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 119.07 E-value: 5.73e-30

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   7 LIFATsllLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLF-SSMTNAwQTGQW 84
Cdd:COG1007  108 LLFAT---LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSL 183

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  85 DITQL-----TCPMSSTILTAAISM-------KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMK----FPPITLLFMTSQS 148
Cdd:COG1007  184 NLAGIaaalaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPG 263

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 149 LNP---TLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLAL--LNFYL--YVMMTAAVFLTLDS 221
Cdd:COG1007  264 LAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILL 343

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149729233 222 IK-----TLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIA 283
Cdd:COG1007  344 LSrkggeAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAV 410

ND2

MTH00199

NADH dehydrogenase subunit 2; Provisional

13-267

7.16e-27

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 110.11 E-value: 7.16e-27

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  13 LLLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  88 QLTCPMSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPTLLTsmAILSAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 168 MGLNQTQTRKILAFSSISHLGW----MAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLK--LSTLMTTWTKTPALS 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343

                        250       260
                 ....*....|....*....|....*.
gi 149729233 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369

Proton_antipo_M

pfam00361

Proton-conducting membrane transporter; This is a family of membrane transporters that ...

23-268

1.24e-26

Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 107.01 E-value: 1.24e-26

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   23 SNHWIMAWAGLELNTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQL-----TCPMSST 96
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   97 ILTAAISM------KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPT------LLTSMAILSAAL 164
Cdd:pfam00361  81 LLLLFLLIlvgflfKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  165 GGWMGLNQTQTRKILAFSSISHLGWMAIII----IYCPKLALLNFYLYVMMTAAVFLTLDSI-----KTLKLSTLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240

                         250       260       270
                  ....*....|....*....|....*....|...
gi 149729233  236 KTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273

PRK05777

NADH-quinone oxidoreductase subunit NuoN;

14-281

1.08e-23

NADH-quinone oxidoreductase subunit NuoN;

Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 101.44 E-value: 1.08e-23

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  14 LLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  93 MSSTI------------LTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMK---FPPIT-LLFMTSQSLNPT---L 153
Cdd:PRK05777 193 LADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 154 LTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLAL--LNFYL--YVMMTAAVF--LTLDSIKTLKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEA 352

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 149729233 228 STLmTTWT----KTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATI 281
Cdd:PRK05777 353 ESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVI 409

NDH_I_N

TIGR01770

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...

14-282

2.49e-22

Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 97.33 E-value: 2.49e-22

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   14 LLGSTITISSNHWIMAWAGLELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   93 MSSTILT------------AAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMK---FPPITLLFMTSQSLNPTLLTSM 157
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFGFSEAWQIF 271

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  158 ----AILSAALGGWMGLNQTQTRKILAFSSISHLGWmAIIIIYCPKLAL---LNFYL--YVMMTAAVFLTLDSIKTLK-- 226
Cdd:TIGR01770 272 laiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGY-ILIGLLAGTLEGikaVLFYIfiYALMSLGAFGVLSLLRSYKde 350

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  227 ----LSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATII 282
Cdd:TIGR01770 351 wieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIA 410

HyfB

COG0651

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...

13-283

2.85e-21

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];

Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.06 E-value: 2.85e-21

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  13 LLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCP 92
Cdd:COG0651  116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  93 MSS----------TILTAAISMKLGLAPFHFWFPE-----------VLQGCSLTTGLVLstVMKFppITLLFMTSQSLNP 151
Cdd:COG0651  196 LAEldpglllaafALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVYA--ILRV--LTLLFGADPALFL 271

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 152 -TLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYV----MMTAAVFLTLDSI---- 222
Cdd:COG0651  272 gTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAAGAIerat 351

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149729233 223 KTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIA 283
Cdd:COG0651  352 GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412

ND2

MTH00198

NADH dehydrogenase subunit 2; Provisional

15-267

1.97e-19

NADH dehydrogenase subunit 2; Provisional

Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 89.15 E-value: 1.97e-19

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  15 LGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAI---------EAATKYFLVQAAASTLVLFSSMTNAWQTGQWD 85
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEG 278

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  86 I--TQLTCPMSST------------ILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLfmTSQSLNP 151
Cdd:MTH00198 279 MlgTILSATLETTnielrqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITS 356

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 152 TLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMM-------TAAVFLTLDSIKT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsalaSFTVICTLEEFGT 436

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149729233 225 L------------------KLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 437 RtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497

ndhB

CHL00049

NADH dehydrogenase subunit 2

7-263

5.45e-16

NADH dehydrogenase subunit 2

Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.51 E-value: 5.45e-16

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   7 LIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHP-RAIEAATKYFLVQAAASTLVL--FSSM--TNAWQT 81
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLygLSGGEI 193

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  82 GQWDI------TQLTCPMSSTI----LTAAISMKLGLAPFHFWFPEVLQGC-----------SLTTGLVLSTVMkfppIT 140
Cdd:CHL00049 194 ELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FD 269

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 141 LLFMTSQSLNPTLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII-------YCPKLALLNFYLYVMMTA 213
Cdd:CHL00049 270 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMNLGT 349

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 149729233 214 AVFLTLDSIK--TLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 350 FACIVLFGLRtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401

PRK02504

NAD(P)H-quinone oxidoreductase subunit N;

50-263

7.83e-14

NAD(P)H-quinone oxidoreductase subunit N;

Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 72.01 E-value: 7.83e-14

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  50 PRAIEAATKYFLVQAAASTLVLF-SSMTNAWQTGQwdiTQLTCpMSSTILT--------------AAISMKLGLAPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSA-IALALITspslglalalvfviAGIAFKISAVPFHQW 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 115 FPEVLQGC-----------SLTTGLVLST---VMKFPPITLLFMTsqslnptLLTSMAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK02504 233 TPDVYEGSptpvvaflsvgSKAAGFALAIrllVTAFPSFDEQWKL-------LFTALAILSMVLGNVVALAQTSMKRMLA 305

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 181 FSSISHLGWMAIIII------YCPKLALLNFYLYVMMTAAVFLTLDSIKT--LKLSTLMTTWTKTPALSAMLMLTLLSLA 252
Cdd:PRK02504 306 YSSIGQAGFVMIGLVagteagYASMVFYLLAYLFMNLGAFACVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLG 385

                        250
                 ....*....|.
gi 149729233 253 GLPPLTGFLPK 263
Cdd:PRK02504 386 GIPPLAGFFGK 396

NuoM

COG1008

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...

49-283

2.18e-11

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase

Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 64.72 E-value: 2.18e-11

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  49 HPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQW-----DITQLTCPMSSTILT-----AAISMKLGLAPFHFWFPEV 118
Cdd:COG1008  156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAQLLLflaffIAFAVKVPMFPFHTWLPDA 235

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 119 LQGCSLTTGLVLSTVM---------KFPpITLLFMTSQSLNPTLLTsMAILSAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008  236 HVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAPLLAA-LGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 190 MAIIIiycpklALLNFY-----LYVM-----MTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLP 255
Cdd:COG1008  314 VLLGI------FALNPLglqgaVLQMvshglITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387

                        250       260
                 ....*....|....*....|....*...
gi 149729233 256 PLTGFLPKWLIIQELTKQemAPVATIIA 283
Cdd:COG1008  388 GTSGFVGEFLVLLGAFQV--NPWLAILA 413

PRK08376

putative monovalent cation/H+ antiporter subunit D; Reviewed

33-266

1.16e-10

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 1.16e-10

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  33 LELNTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCPMSST----------ILTAA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENptvvakialaLFIAG 229

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 102 ISMKLGLAPFHFWFPEVLQGC--SLTTGLVLSTVMKFPPITLLFMT--SQSLNPT----LLTSMAILSAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 174 QTRKILAFSSISHLGWM------AIIIIYCPKL----------ALLNFYLYVMMTAAVFLTLDSI----KTLKLSTLMTT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMasygeialagGIYHIVNHALYKALLFLTAGAViyetGTRNLNELGGL 389

                        250       260       270
                 ....*....|....*....|....*....|...
gi 149729233 234 WTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422

NDH_I_M

TIGR01972

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...

50-268

5.53e-10

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]

Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.34 E-value: 5.53e-10

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   50 PRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQ-WDITQL-TCPMSSTILT-------AAISMKLGLAPFHFWFPEVlQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDA-H 230

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  121 GCSLTTGLVL--STVMKFPP-------ITLLFMTSQSLNPtLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMA 191
Cdd:TIGR01972 231 VEAPTAGSVIlaGVLLKMGTygflrfnLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  192 IIIIYCPKLALLNFYLYV----MMTAAVFLTL----DSIKTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMishgLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389


                  ....*
gi 149729233  264 WLIIQ 268
Cdd:TIGR01972 390 FLILL 394

PRK08375

putative monovalent cation/H+ antiporter subunit D; Reviewed

33-282

9.29e-10

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 59.51 E-value: 9.29e-10

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  33 LELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFS-SMTNAwQTGQWDITQLT--CPMSSTILTA------AIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAgaLAENPTVVTAfgfvllALA 213

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 104 MKLGLAPFHFWFPEVLQGCSLTTGLVLS-TVMK----------FPPITLLFMTSQSLNpTLLTSMAILSAALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKvavyaliriyFTVFGGDFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 173 TQTRKILAFSSISHLGWMAIIIIYCPKLALLN--FYL--YVMMTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAML 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 149729233 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATII 282
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410

PRK08668

NADH dehydrogenase subunit M; Validated

2-282

4.01e-09

NADH dehydrogenase subunit M; Validated

Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.70 E-value: 4.01e-09

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   2 NPQAKLIFATSLLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHpRAIEAATKYFLVQAAASTLVLFSSMTNAWQT 81
Cdd:PRK08668  96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  82 GQWDITQLTCPM---SST--------ILTAAISMKLGLAPFHFWFPE-----------VLQGCSLTTG-LVLSTVMKFPP 138
Cdd:PRK08668 175 GTFDFADISQGLindTSTgfalivflFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaYGFLLVLYVLP 254

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 139 ITLLFMT-----SQSLNPTLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKL----ALLNFYLYV 209
Cdd:PRK08668 255 GTKLFSEfgtyrGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFNHA 334

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149729233 210 MMTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATII 282
Cdd:PRK08668 335 LFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411

PRK06458

hydrogenase 4 subunit F; Validated

8-268

1.91e-08

hydrogenase 4 subunit F; Validated

Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 55.71 E-value: 1.91e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   8 IFATSLLLgstiTISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  78 AWQTGQW-DITQLTCPMSSTILTAAISM-------KLGLAPFHFWFPE-----------VLQGCSLTTGLVLstVMKFPP 138
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRYYI 269

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 139 ITLLFMTSQSLNPtLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMM----TAA 214
Cdd:PRK06458 270 LIDAAIGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSA 348

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 149729233 215 VFLT----LDSIKTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 349 IFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406

PRK12644

putative monovalent cation/H+ antiporter subunit A; Reviewed

97-263

2.10e-08

putative monovalent cation/H+ antiporter subunit A; Reviewed

Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 55.70 E-value: 2.10e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  97 ILTAAISmKLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLL------FMTSQSLNPTLLTsMAILSAALGGWMGL 170
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRAL 286

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 171 NQTQTRKILAFSSISHLGWMAIII-IYCPKLALLNFYLYV---MMTAAVFLTLDSIK----TLKLSTLMTTWTKTPALSA 242
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGIIDhstgTRDIRKLSGLGRRQPVLAV 366

                        170       180
                 ....*....|....*....|.
gi 149729233 243 MLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAK 387

PRK07234

putative monovalent cation/H+ antiporter subunit D; Reviewed

33-271

4.88e-08

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.19 E-value: 4.88e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  33 LELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTC--PMSSTILTAAISMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 111 FHFWFPEVLQGCSLTTGLVLS-TVMK---FPPITLLFMTSQSLNPtlLTSMAILSAALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 187 LGWmaiiIIYCPKLALLNFYLYVMMTAAVFLTLDSIKTLKLSTLMTTWTKTPALSAMLMLTlLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07234 281 LGF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMAS-FSIAGFPLLAGFVSKVLT 355


                 ....*
gi 149729233 267 IQELT 271
Cdd:PRK07234 356 LKNLL 360

PRK12650

DUF4040 family protein;

29-263

1.81e-07

DUF4040 family protein;

Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 52.74 E-value: 1.81e-07

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  29 AWaglELNTLAILPLISKSHhPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQwdiTQLTCPMSSTI------LTAAI 102
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVwaekpgLTTVV 210

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 103 SMKLGLA--------PFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLL--FMTSQSLNPT---LLTSMAILSAALGGWMG 169
Cdd:PRK12650 211 AVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFA 290

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 170 LNQTQTRKILAFSSISHLGWM-AIIIIYCP---KLALLNFYLYVMMTAAVFLTLDSIK----TLKLSTLMTTWTKTPALS 241
Cdd:PRK12650 291 VQKTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTF 370

                        250       260
                 ....*....|....*....|..
gi 149729233 242 AMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 371 VSVTIAALSMAAVPPLFGFVSK 392

NuoL

COG1009

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...

23-283

1.16e-06

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase

Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 50.15 E-value: 1.16e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  23 SNHWIMAWAGLELNTLAILPLISKSHH-PRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQL----TCPMSSTI 97
Cdd:COG1009  130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaPTILSSPL 209

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  98 LTAAISM-------KLGLAPFHFWFPEVLQG-----------CSLTTGLVLstVMKFPPITllfmtsqSLNPTLLTSMAI 159
Cdd:COG1009  210 LTLILLLlllgafgKSAQFPLHFWLPDAMEGptpvsallhaaTMVKAGVYL--LARLSPLF-------ALSPVWLTVVAI 280

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 160 LSAA---LGGWMGLNQTQTRKILAFSSISHLGWMAIIIiycpKLALLNFYLYVMMT-----AAVFLTLDS-IKTL----- 225
Cdd:COG1009  281 IGAItalFAALIALAQTDIKRVLAYSTVSQLGYMFLAL----GVGAYVAALFHLLThaffkALLFLGAGSvIHATgtrdi 356

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 226 -KLSTLmttWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMAPVATIIA 283
Cdd:COG1009  357 rKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVA 413

PRK06277

energy conserving hydrogenase EhbF;

34-268

3.15e-06

energy conserving hydrogenase EhbF;

Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.49 E-value: 3.15e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  34 ELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQ-----LTCPMSSTILTAAISMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 109 A------PFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNP--------TLLTSMAILSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGlsyfpsaqGVLIALSVLAMVFGVVMALLQTD 289

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 175 TRKILAFSSISHLGWMAIIIIYCPKLA----LLNFYLYVMMTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAMLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369

                        250       260
                 ....*....|....*....|..
gi 149729233 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391

ND5

MTH00032

NADH dehydrogenase subunit 5; Provisional

103-268

3.17e-06

NADH dehydrogenase subunit 5; Provisional

Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.80 E-value: 3.17e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 103 SMKLGLapfHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMT-----SQSLNPTLLTSMAILSAALGGWMGLNQTQTRK 177
Cdd:MTH00032 239 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSfplfeKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 178 ILAFSSISHLGWMAIIIIY--CPKLALLNFYLYVMMTAAVFL---------TLDSIKTLKLSTLMTTwtkTPALSAMLML 246
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLI 392

                        170       180
                 ....*....|....*....|..
gi 149729233 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414

PRK12663

Na+/H+ antiporter subunit D;

90-268

8.40e-06

Na+/H+ antiporter subunit D;

Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 47.25 E-value: 8.40e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  90 TCPMSSTILTAAISMKLGLAPFhFWFPEVLQGCSLTTGLVLSTVMK-------FPPITLLFMTSQSLNPTLLTSMAILSA 162
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITM 283

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 163 ALGGWMGLNQTQTRKILAFSSISHLGWMAIiiiycpKLALLN--------FYLY--VMMTAAVFLTLDSIKTL----KLS 228
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVhdMVVKTALFLIAGSLVRLtgyrSLQ 357

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 149729233 229 TLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397

PRK08676

hydrogenase membrane subunit; Validated

13-270

9.40e-06

hydrogenase membrane subunit; Validated

Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.06 E-value: 9.40e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  13 LLLGSTITISSNHWIMAWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAA------STLVLFSSMTNAWQTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  87 TQL---TCPMSSTILTAAISM-------KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPT---- 152
Cdd:PRK08676 191 TELaahASLLSPSVLGASFLFifigflaKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 153 ----LLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVMMTAAVFLTL--------- 219
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhr 350

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 149729233 220 -------DSIKTLKLSTLMTTWTktpalsamLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08676 351 qyrsdrfDRIFDVFRLQPVAAWG--------VILGSAAIIGMPPFPLFLSKFFILLQL 400

PRK12647

putative monovalent cation/H+ antiporter subunit A; Reviewed

110-283

1.22e-05

putative monovalent cation/H+ antiporter subunit A; Reviewed

Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 47.22 E-value: 1.22e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 110 PFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLfmtsQSLNP---------TLLTSMAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLL----ARLNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLILA 288

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 181 FSSISHLGWMAIIIIYCPKLALLNFYLYV----MMTAAVFLTLDSIK----TLKLSTLMTTWTKTPALSAMLMLTLLSLA 252
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMA 368

                        170       180       190
                 ....*....|....*....|....*....|.
gi 149729233 253 GLPPLTGFLPKWLIIQELTKQEMAPVATIIA 283
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLILTVA 399

PRK12662

putative monovalent cation/H+ antiporter subunit D; Reviewed

33-267

1.24e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 46.65 E-value: 1.24e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  33 LELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFS-----SMTNAWQTGQWDITQLTCPMSSTI------LTAA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMGDMFLIIQDLPTNRAIqigvlfIMVG 218

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 102 ISMKLGLAPFHFW----FPEVLQGCSLTTGLVLSTVMKFPPITL--------LFMTSQSLNpTLLTSMAILSAALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWliqaYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 170 LNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYV----MMTAAVFLTLDSIK----TLKLSTLMTTWTKTPALS 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377

                        250       260
                 ....*....|....*....|....*.
gi 149729233 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403

PRK06589

putative monovalent cation/H+ antiporter subunit D; Reviewed

2-283

1.64e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.35 E-value: 1.64e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233   2 NPQAKLIFATSLLLGSTITISSNHWIMaWAGLELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQ- 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTk 193

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  81 TGQWDITQLTCPMSSTILTAAISMKLGLA-----PFHFWFPEVLQG----CSLTTGLVLSTVMKFPPITLLFMTSQSLNP 151
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAktaifPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYL 273

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 152 TLLTSM-------AILSAALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIIYCPKLALLNFYL--YVMMTAAVFLTLD 220
Cdd:PRK06589 274 QRIFAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149729233 221 SIKTLK----LSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPVATIIA 283
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420

NADH_dehy_S2_C

pfam06444

NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ...

295-340

1.94e-05

NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.

Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.47 E-value: 1.94e-05

                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 149729233  295 RLAYCATITLPPHTTNHMKQWYTNKPVNTT-VSVLVTMSITLLPLSP 340
Cdd:pfam06444   5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51

ND5

MTH00207

NADH dehydrogenase subunit 5; Provisional

82-268

4.22e-05

NADH dehydrogenase subunit 5; Provisional

Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.14 E-value: 4.22e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  82 GQWDITQLTCPMSSTILTAAISM----KLGLAPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLL-----FMTSQSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 153 LLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLG-WMAIIIIYCPKLALLNFYLYVMMTAAVFLTLDSI-----KTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 149729233 227 LSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366

PRK07691

putative monovalent cation/H+ antiporter subunit D; Reviewed

103-268

9.03e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.17 E-value: 9.03e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 103 SMKLGLAPFHFWFPE----------VLQGCSLTTGLVLSTVMKFppiTLLFMTSQSLNPTLLTSMAILSAALGGWMGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 173 TQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVM----MTAAVFLTLDSIKTL-------KLSTLMTTWtktPALS 241
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIhdmiVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLG 373

                        170       180
                 ....*....|....*....|....*..
gi 149729233 242 AMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 374 WMFFIAALSLAGIPPLSGFYGKFFIVE 400

ND5

MTH00020

NADH dehydrogenase subunit 5; Reviewed

103-268

1.19e-04

NADH dehydrogenase subunit 5; Reviewed

Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.91 E-value: 1.19e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 103 SMKLGLapfHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQ--SLNPTLLTSMAI---LSAALGGWMGLNQTQTRK 177
Cdd:MTH00020 224 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALIIVTIvgsLTVFFAATVGLVQNDLKK 300

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 178 ILAFSSISHLGWMAIII-IYCPKLALLNFYLYVMMTAAVFLTLDSI--------KTLKLSTLMTTwtkTPALSAMLMLTL 248
Cdd:MTH00020 301 VIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPLTYIFFLIGS 377

                        170       180
                 ....*....|....*....|
gi 149729233 249 LSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00020 378 LSLMGFPYLTGFYSKDLILE 397

PRK06473

NADH-quinone oxidoreductase subunit M;

55-266

2.44e-04

NADH-quinone oxidoreductase subunit M;

Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.44e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  55 AATKYFLVQAAASTLVLFSSMTNAWQTG--QWDITQL---TCPMSSTILTAA-----ISMKLGLAPFHFWFPEVLQGCSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEAST 237

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 125 TTGLVLSTVM---------KFPpITLLFMTSQSLNPTLLTsMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII 195
Cdd:PRK06473 238 PVSVLLAGVLlklgtygllRFG-VGLFPEAWVYLAPWLAT-WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 196 YCPKLALLNFYLYVM----MTAAVFLTL-------DSIKTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVFQMIshglISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395


                 ..
gi 149729233 265 LI 266
Cdd:PRK06473 396 LV 397

PRK08667

hydrogenase membrane subunit; Validated

59-270

3.51e-04

hydrogenase membrane subunit; Validated

Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 42.41 E-value: 3.51e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  59 YFLVQAAASTLVLFSSMTNAW-QTGQWDITQLTCP-----MSSTILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLST 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 133 VM-KFPPITLLFMTSQSLNPTLLTSMAIL-----SAALGGWMGLNQTQTRKILAFSSISHLG--WMAI---IIIYC---P 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPELWWGVLILlagsiSALLGVIYALKEHDLKGLLAYSSIENIGiiLMGIglyVIFGVyglD 325

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 199 KLALLNF-------YLYVMMTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405


                 ...
gi 149729233 268 QEL 270
Cdd:PRK08667 406 ESF 408

ND5

MTH00210

NADH dehydrogenase subunit 5; Provisional

103-271

5.03e-04

NADH dehydrogenase subunit 5; Provisional

Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 41.92 E-value: 5.03e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 103 SMKLGLapfHFWFPEVLQGCSLTTGLVLSTVMKFPPITL------LFMTSqSLNPTLLTSMAILSAALGGWMGLNQTQTR 176
Cdd:MTH00210 225 SAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLiirsgpLFEGS-PLALTIVTILGALTAFFAATVGVVQNDLK 300

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 177 KILAFSSISHLGWMAIII-IYCPKLALLNFYLYVMMTAAVFLTLDSI--------KTLKLSTLMTTwtkTPALSAMLMLT 247
Cdd:MTH00210 301 KVIAYSTCSQLGYMVMVCgISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeqDMRKMGGLIKS---IPFTYVMILIG 377

                        170       180
                 ....*....|....*....|....
gi 149729233 248 LLSLAGLPPLTGFLPKWLIIqELT 271
Cdd:MTH00210 378 SLSLMGFPYLTGFYSKDLIL-ELT 400

PRK06525

hydrogenase 4 subunit D; Validated

33-267

6.01e-04

hydrogenase 4 subunit D; Validated

Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.50 E-value: 6.01e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  33 LELNTLAILPLISKSHHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQLTCPMSST-------ILTAAISMK 105
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLkylvflgILFAAWGKS 221

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 106 LGLaPFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNP------TLLTSMAILSAALGGWMGLNQTQTRKIL 179
Cdd:PRK06525 222 AQL-PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLL 300

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 180 AFSSISHLGWMAIII---IYCPKLALLNFYLYVMMTAAV----FLTLDSIK----TLKLSTLMTTWTKTPALSAMLMLTL 248
Cdd:PRK06525 301 AYSTITQLGYMFFGLslaILGSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAA 380

                        250
                 ....*....|....*....
gi 149729233 249 LSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIF 399

PRK12649

putative monovalent cation/H+ antiporter subunit A; Reviewed

48-263

7.57e-04

putative monovalent cation/H+ antiporter subunit A; Reviewed

Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.35 E-value: 7.57e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  48 HHPRAIEAATKYFLVQAAASTLVLFSSMTNAWQTGQWDITQL--------TCPMSSTILTAAISMKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselieNIKGHPLFLITLILIFIGAAaksaqgPFYI 235

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 114 WFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPT-----LLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 189 WMAIIIIYCPK------LALLNFYL--YVMMTAAVFLTLDSI----KTLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395


                 ....*..
gi 149729233 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402

PRK07363

NADH-quinone oxidoreductase subunit M;

96-268

1.50e-03

NADH-quinone oxidoreductase subunit M;

Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.50e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  96 TILTAAISMKLGLAPFHFWFPEVLQGCSLTTGLVLSTVM-KFPPITL------LFMTSQSLNPTLLTSMAILSAALGGWM 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALS 288

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 169 GLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYVM---MTAAVFLTLDSIKTLKLST--------LMTTWTKT 237
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMIshgLILALLFHLVGIVERKVGTrdldvlngLMNPIRGL 368

                        170       180       190
                 ....*....|....*....|....*....|.
gi 149729233 238 PALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399

PRK06459

hydrogenase 4 subunit B; Validated

15-270

3.45e-03

hydrogenase 4 subunit B; Validated

Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 3.45e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  15 LGSTITISSNHWIMAWAGLELNTLA---ILPLISKSHHPRAIeaatkyFLVQAAASTLVLFSSMTNAW-QTGQWDITQLT 90
Cdd:PRK06459  83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFiISGTTNFSYLP 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  91 CPMSSTILTAAISMKLGLAPFHF--WFPEVLQGCSLTTGLVLSTVMK----FPPITLLFMTSQS-LNPTLLTSMAI--LS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIpIGYFGLTILAIgaFS 236

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 162 AALGGWMGLNQTQTRKILAFSSISHLGWM-----AIIIIYCPKLALLNFYLYVMMTAA---------VFLTLDSIKTLKL 227
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSI 316

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 149729233 228 STLMTTWTKTPALSAMLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 317 TYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357

PRK12561

NAD(P)H-quinone oxidoreductase subunit 4; Provisional

55-274

3.90e-03

NAD(P)H-quinone oxidoreductase subunit 4; Provisional

Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.86 E-value: 3.90e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233  55 AATKYFLVQAAASTLVLFSSMTNAWQTGQ--WDITQLTC---PMSSTILT-----AAISMKLGLAPFHFWFPEVLQGCSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 125 TTGLVLSTVM-KFPPITLLFMTSQSLNPT------LLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYC 197
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 198 PKL----ALLNFYLYVMMTAAVFL----TLDSIKTL---KLSTLMTTWTKTPALsaMLMLTLLSLAgLPPLTGFLPKWLI 266
Cdd:PRK12561 298 TDLgisgAMLQMISHGLIAAALFFltgvTYERTHTLsipNMGGLAKVMPKTFAL--FTASSMASLA-LPGMSGFVSELTV 374


                 ....*...
gi 149729233 267 IQELTKQE 274
Cdd:PRK12561 375 FLGITSSD 382

PRK12665

putative monovalent cation/H+ antiporter subunit D; Reviewed

140-268

5.04e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed

Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 38.80 E-value: 5.04e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 140 TLLFmTSQSLNpTLLTSMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNFYLYV----MMTAAV 215
Cdd:PRK12665 264 TLLF-PGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTL 341

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149729233 216 FLTLDSIK----TLKLSTLMTTWTKTPALSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 342 FLVVGLIErqagSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398

PRK12646

DUF4040 family protein;

110-272

5.79e-03

DUF4040 family protein;

Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.58 E-value: 5.79e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 110 PFHFWFPEVLQGCSLTTGLVLSTVMKFPPITLLFMTSQSLNPT-----LLTSMAILSAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 185 SHLGW-MAII-----IIYCPKLALLNFYLYVMMTA------------AVFLTLDSIK----TLKLSTLMTTWTKTPALSA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYVFVLFAAlfhlmnhaifkcALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387

                        170       180       190
                 ....*....|....*....|....*....|
gi 149729233 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417

ND4

MTH00226

NADH dehydrogenase subunit 4; Provisional

101-267

6.11e-03

NADH dehydrogenase subunit 4; Provisional

Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 38.36 E-value: 6.11e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 101 AISMKLGLAPFHFWFPEV-----LQGCSLTTGLVLS------TVMKFPpitLLFMTSQSLNPTLLtSMAILSAALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKlggyglVRLSWP---ILPLGAQNLAPAVI-AMGIVGIVYGSFAT 314

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149729233 170 LNQTQTRKILAFSSISHLGWMAIIIIYCPKLALLNfYLYVMMTAAVFLTL---------DSIKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTG-SIFIMLAHGIVSSLlfilvtilyDRHHTRLIKYYRGLSITMPIW 393

                        170       180
                 ....*....|....*....|....*..
gi 149729233 241 SAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 394 GTIMIVTSLANVAVPPSGNFIGEYLSI 420

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01