|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-330 |
2.60e-142 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 409.54 E-value: 2.60e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVMFYIFMILAFLV 80
Cdd:MTH00163 114 IFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLV 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 81 KMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSL 160
Cdd:MTH00163 194 KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 161 IAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSS 240
Cdd:MTH00163 274 IAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSS 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 241 NMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFMHWLPLN 320
Cdd:MTH00163 354 NMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLN 433
|
330
....*....|
gi 1496231257 321 ILCLKGEYFF 330
Cdd:MTH00163 434 LLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
1-330 |
2.41e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 329.49 E-value: 2.41e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVL---FNVYFCFNTLYFPLLYDFGSVYVMFYIFMILA 77
Cdd:MTH00150 82 FFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDL 157
Cdd:MTH00150 162 FLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 158 KSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLL 237
Cdd:MTH00150 242 KSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLF 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 238 SSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFMHWL 317
Cdd:MTH00150 322 CIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWV 401
|
330
....*....|...
gi 1496231257 318 PLNILCLKGEYFF 330
Cdd:MTH00150 402 PLLLLILKSDLLF 414
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-327 |
1.10e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 313.99 E-value: 1.10e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLL-YDFGSVYV--MFYIFMILA 77
Cdd:MTH00014 117 IFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILA 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDL 157
Cdd:MTH00014 197 FMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 158 KSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLL 237
Cdd:MTH00014 277 KSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLL 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 238 SSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFMHWL 317
Cdd:MTH00014 357 SAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLV 436
|
330
....*....|
gi 1496231257 318 PLNILCLKGE 327
Cdd:MTH00014 437 PLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-327 |
6.65e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 312.13 E-value: 6.65e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSV------YVMFYIFM 74
Cdd:MTH00124 120 IMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLAC 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:MTH00124 200 LMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQ 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWW 234
Cdd:MTH00124 280 TDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWW 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 235 FLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFM 314
Cdd:MTH00124 360 LLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTL 439
|
330
....*....|...
gi 1496231257 315 HWLPLNILCLKGE 327
Cdd:MTH00124 440 HIIPLLLLILKPE 452
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-330 |
6.54e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 306.52 E-value: 6.54e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVM---FYIFMILA 77
Cdd:MTH00205 115 ITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYlflYWIFLMLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDL 157
Cdd:MTH00205 195 FLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 158 KSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLL 237
Cdd:MTH00205 275 KSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLL 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 238 SSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFMHWL 317
Cdd:MTH00205 355 ISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWF 434
|
330
....*....|...
gi 1496231257 318 PLNILCLKGEYFF 330
Cdd:MTH00205 435 PLNILILKLKIFI 447
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-330 |
1.95e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 297.98 E-value: 1.95e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVM------FYIFM 74
Cdd:MTH00068 120 IFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLAC 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:MTH00068 200 LLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQ 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWW 234
Cdd:MTH00068 280 TDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWW 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 235 FLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFM 314
Cdd:MTH00068 360 LLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLAL 439
|
330
....*....|....*.
gi 1496231257 315 HWLPLNILCLKGEYFF 330
Cdd:MTH00068 440 HILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-319 |
1.54e-95 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 290.72 E-value: 1.54e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLY------DFGSVYVMFYIFM 74
Cdd:MTH00044 121 IAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFC 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKF-NYFWMSLGLFGGVIVSFICFR 153
Cdd:MTH00044 201 ILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLR 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 154 QIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLW 233
Cdd:MTH00044 281 QTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLW 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 234 WFLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLF 313
Cdd:MTH00044 361 WLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
....*.
gi 1496231257 314 MHWLPL 319
Cdd:MTH00044 441 LHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-324 |
2.01e-90 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 277.54 E-value: 2.01e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVY-------FCFNTLYFPLLYDFGSVYVMFYIF 73
Cdd:MTH00110 120 ILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQnnlgslnFLLLQLWAQPLPNSWSNNLLWLAC 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 74 MiLAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFR 153
Cdd:MTH00110 200 M-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLR 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 154 QIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLW 233
Cdd:MTH00110 279 QTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATW 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 234 WFLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLF 313
Cdd:MTH00110 359 WLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
330
....*....|.
gi 1496231257 314 MHWLPLNILCL 324
Cdd:MTH00110 439 LHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-319 |
4.63e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 273.74 E-value: 4.63e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVY---VMFYIFMILA 77
Cdd:MTH00206 119 ILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTwnnNLWWLACILA 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDL 157
Cdd:MTH00206 199 FLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDL 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 158 KSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLL 237
Cdd:MTH00206 279 KSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLF 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 238 SSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFMHWL 317
Cdd:MTH00206 359 FLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLF 438
|
..
gi 1496231257 318 PL 319
Cdd:MTH00206 439 PV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-327 |
3.54e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 251.41 E-value: 3.54e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTL------YFPLLYDFGSVYVMFYIFM 74
Cdd:MTH00127 121 VMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGC 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:MTH00127 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWW 234
Cdd:MTH00127 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWW 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 235 FLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYFREYHLLFM 314
Cdd:MTH00127 361 FIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMAL 440
|
330
....*....|...
gi 1496231257 315 HWLPLNILCLKGE 327
Cdd:MTH00127 441 HLLPLLLLILKPE 453
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-275 |
1.82e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 177.12 E-value: 1.82e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLL---YDFGSVYVMF---YIFM 74
Cdd:pfam00361 9 LGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaLTGGLNSSGLlllFLLI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:pfam00361 89 LVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALVQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINIMPSMSLW 233
Cdd:pfam00361 169 TDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILALV 248
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1496231257 234 WFLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLS 275
Cdd:pfam00361 249 FLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-286 |
8.45e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 177.97 E-value: 8.45e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYqPERLQAGIYLIFYTLVASLPLLIVLFNVYF---CFNTLYFPLL---YDFGSVYVMFYIFM 74
Cdd:COG1008 138 VFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFlagALTFDIAELAaapLPLTAQLLLFLAFF 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 IlAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------KFNYFWMSLGLFGGVIVS 148
Cdd:COG1008 217 I-AFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA-----LPLfpeasaYFAPLLAALGVIGIIYGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 149 FICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMP 228
Cdd:COG1008 291 LVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMP 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231257 229 SMSLWWFLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-286 |
7.23e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 164.85 E-value: 7.23e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTL-YFPLLYDFGSVYVMFYIFM--ILA 77
Cdd:MTH00204 139 ILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQID 156
Cdd:MTH00204 219 LAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVD 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 157 LKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFL 236
Cdd:MTH00204 299 FKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLV 378
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1496231257 237 LSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:MTH00204 379 LSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
1-286 |
4.49e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 160.22 E-value: 4.49e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFG-SVYVMFYIFM--ILA 77
Cdd:MTH00217 136 ILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKiEKELQYFIFLgfFLS 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 78 FLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQID 156
Cdd:MTH00217 216 LAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVD 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 157 LKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFL 236
Cdd:MTH00217 296 LKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLL 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1496231257 237 LSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:MTH00217 376 LVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-286 |
2.07e-44 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 158.44 E-value: 2.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYqPERLQAGIYLIFYTLVASLPLLIVLFNVYFC----FNTLYFPLLYDFGSVYVMFYIFMI- 75
Cdd:PRK05846 138 VFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYWLFLa 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 76 --LAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMkiisfLGL------KFNYFWMSLGLFGGVIV 147
Cdd:PRK05846 217 ffIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 148 SFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIM 227
Cdd:PRK05846 292 ALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVM 371
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 228 PSMSLWWFLLSSSNMAAPPSLNLIGE-LSLLNSIISWSTFMFLSLIFLsFFSAVYTLYMY 286
Cdd:PRK05846 372 PVLAAFFLFFAMASLGLPGTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
1-284 |
2.86e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 158.55 E-value: 2.86e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYV-----MFYIFMI 75
Cdd:MTH00226 158 ILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSeqtqkWIFLGIF 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 76 LAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLK-FNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQ 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWW 234
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIM 397
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1496231257 235 FLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLY 284
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
1-286 |
6.16e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 154.33 E-value: 6.16e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGyQPERLQAGIYLIFYTLVASLPLLIVLFNVYF--CFNTLYFPLL---YDFGSVYVMFYIFMI 75
Cdd:TIGR01972 133 VFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFlgGGTFDLLELLnlpLPFGVQTWLFLAFFI 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 76 lAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQ 154
Cdd:TIGR01972 212 -AFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQ 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWW 234
Cdd:TIGR01972 291 TDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFF 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1496231257 235 FLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:TIGR01972 371 MLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
1-306 |
1.39e-42 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 151.60 E-value: 1.39e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFgsvyvMFYIFMILAFLV 80
Cdd:MTH00094 89 MFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-----EMFFILSLSFMM 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 81 KMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLglkFNYFWMSLGLFGGVIVSFICFRQIDLKSL 160
Cdd:MTH00094 164 KFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSKSL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 161 IAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSS 240
Cdd:MTH00094 241 AAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLS 320
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231257 241 NMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMYSYSQHGLIYSGVYTCSLGYF 306
Cdd:MTH00094 321 NSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLS 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
17-262 |
8.95e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 121.29 E-value: 8.95e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 17 WGYQpERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPL----LYDF-GSVYVMFYIFMILAFLVKMPIFLFHLWL 91
Cdd:PRK12561 130 WGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTWL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 92 PKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMS 170
Cdd:PRK12561 209 PDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 171 MVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNL 250
Cdd:PRK12561 289 FVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGF 368
|
250
....*....|..
gi 1496231257 251 IGELSLLNSIIS 262
Cdd:PRK12561 369 VSELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
21-290 |
5.43e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 118.33 E-value: 5.43e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 21 PERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLL------YDFGSVYVMFyIFMILAFLVKMPIFLFHLWLPKA 94
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAF-ALLLVGFGIKAALFPLHFWLPDA 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 95 HVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMV 172
Cdd:COG0651 232 YPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 173 IGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIG 252
Cdd:COG0651 312 LLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
250 260 270
....*....|....*....|....*....|....*....
gi 1496231257 253 ELSLLNSIISWSTFMFLSLIFL-SFFSAVYTLYMYSYSQ 290
Cdd:COG0651 392 KWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
23-280 |
5.96e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 107.72 E-value: 5.96e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 23 RLQAGIYLIFYTLVASLPLLIVLFNVYFCFN---TLYFPLLYDFG---SVYVMFYIFMILAFLVKMPIFLFHLWLPKAHV 96
Cdd:CHL00011 160 RLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLANQSypvALEILFYIGFLIAYAVKLPIIPLHTWLPDTHG 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 97 EAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMVIGG 175
Cdd:CHL00011 240 EAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIG 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 176 LMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIGELS 255
Cdd:CHL00011 320 IGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELI 399
|
250 260
....*....|....*....|....*
gi 1496231257 256 LLNSIISWSTFMFLSLIFLSFFSAV 280
Cdd:CHL00011 400 VFFGIITSQKYLLMPKILITFVMAI 424
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
17-254 |
5.51e-24 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 102.09 E-value: 5.51e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 17 WGYQpERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPL----LYDFGSVYVMF-YIFMILAFLVKMPIFLFHLWL 91
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGLGFQLLcYAGLLIAYGVKLPIVPLHTWL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 92 PKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMS 170
Cdd:PRK02546 237 PDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMG 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 171 MVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNL 250
Cdd:PRK02546 317 FVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGF 396
|
....
gi 1496231257 251 IGEL 254
Cdd:PRK02546 397 VAEL 400
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-288 |
2.89e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 91.09 E-value: 2.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 21 PERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDF----GSVYVMFYiFMILAFLVKMPIFLFHLWLPKAHV 96
Cdd:PRK08375 152 RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaenPTVVTAFG-FVLLALALKAAVFPLHTWLPRAYP 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 97 EAPISGSMILAGVLLKLGGYGIFRVM----KIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMV 172
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 173 IGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIG 252
Cdd:PRK08375 311 LLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
250 260 270
....*....|....*....|....*....|....*..
gi 1496231257 253 ELSLLNSIISWSTFMFLSLIFL-SFFSAVYTLYMYSY 288
Cdd:PRK08375 391 KWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
74-225 |
8.72e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 89.76 E-value: 8.72e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 74 MILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFIC-F 152
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaI 290
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1496231257 153 RQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 225
Cdd:PRK06473 291 AQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
73-285 |
5.61e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 87.33 E-value: 5.61e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 73 FMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFW-------MSLGLFGGV 145
Cdd:PRK12667 228 LALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRaalspilIILGAVSAI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 146 IVSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 225
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGR 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 226 IMPSMSLWWFLLSSSNMAAPPSLNLIGELSLLNSIISWStfMFLSLIFLSFFSAVYTLYM 285
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG--FYLPALVLLIASAISLVGY 445
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
21-314 |
1.61e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 85.75 E-value: 1.61e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 21 PERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVMFYIFMILAFLVKMPIFLFHLWLPKAHVEAPI 100
Cdd:MTH00062 118 SERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASS 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 101 SGSMILAGVLLKLGGYGIFRVMKIISFLGLkfnYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMN 180
Cdd:MTH00062 198 PVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGD 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 181 WWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIGELSLLNSI 260
Cdd:MTH00062 275 WSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSS 354
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1496231257 261 ISWSTFMFLSLIFLsFFSAVYTLYMYSysqHGLIYSGVYTCSLGYFREYHLLFM 314
Cdd:MTH00062 355 FGVLVYLLFWCFYL-FFGGLVPLILLG---HLLIRSESYESINVSNYSYLFFLI 404
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
71-281 |
2.06e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 85.75 E-value: 2.06e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 71 YIFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIS-FLGLKF-NYFWMSLGLFGGVIVS 148
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 149 FICFRQIDLKSLIAYSSVAHMSMV-----IGGLMsmnwwGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 223
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1496231257 224 INIMPSMSlWWFLLSSSNMA-APPSLNLIGELSLLNSIIS----WSTFMFLSLIFLSFFSAVY 281
Cdd:PRK06458 372 LKVSPLTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLArgplLIAILLLLLLTLAFAALVR 433
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-286 |
2.77e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 79.66 E-value: 2.77e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 41 LLIVLFNVYFCFNTLYFP-----LLYDFGSVYVMFYIFMILAF-LVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLG 114
Cdd:PRK08668 163 MLYAIFLIYAKTGTFDFAdisqgLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLG 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 115 GYGIFRVMKIISFLGL-----------KFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWG 183
Cdd:PRK08668 243 AYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLG 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 184 FMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIGELSLLNSIISW 263
Cdd:PRK08668 323 FAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISK 402
|
250 260
....*....|....*....|...
gi 1496231257 264 STFMFLSLIFlsFFSAVYTLYMY 286
Cdd:PRK08668 403 GMPITAFMAF--FGSIGSFLYVF 423
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
1-252 |
1.32e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 74.36 E-value: 1.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 1 IFFEASLLPTLLLILGWGYQpERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFpllyDFGSVY---------VMFY 71
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSF----DYDAIStqnlslntqLILL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRvmkiisfLGLK-FNYFWM----SLGLFGGVI 146
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-------FGLQlFPQTWSlvapGLAIIGTIS 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 147 V---SFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 223
Cdd:PRK07363 282 ViygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGL 361
|
250 260
....*....|....*....|....*....
gi 1496231257 224 INIMPSMSLWWFLLSSSNMAAPPSLNLIG 252
Cdd:PRK07363 362 MNPIRGLPLTSALLVLAGMASAGIPGLVG 390
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
71-286 |
2.12e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 73.64 E-value: 2.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 71 YIFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII--SFLGLKFNYFWMSLGLFGGVIVS 148
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 149 FICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMP 228
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231257 229 SMSLWWFLLSSSNMAAPPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
21-261 |
8.09e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.07 E-value: 8.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 21 PERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVMFYIFMILAFLVKMPIFLFHLWLPKAHVEAPI 100
Cdd:PRK08667 158 EETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 101 SGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMV---IG--- 174
Cdd:PRK08667 238 NVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgIGlyv 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 175 -----GLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLN 249
Cdd:PRK08667 318 ifgvyGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNG 397
|
250
....*....|..
gi 1496231257 250 LIGELSLLNSII 261
Cdd:PRK08667 398 FASELLLYESFF 409
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-291 |
3.11e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 67.07 E-value: 3.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKII-----SFLGLKFNYFWMSLGLFGGVI 146
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 147 VSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINI 226
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKS 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231257 227 MPSMSLWWFLLSSSNMAAPPSLNLIGELSLLNSIIswSTFMFLSLIFLSFFSAVYTLYMYSYSQH 291
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFI--KSNAWIGLVVLLVGSGLSVIYVWKIVEA 435
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-232 |
4.04e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 66.51 E-value: 4.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFwmslGLFGGVIVSFICFRQ 154
Cdd:PRK07234 191 ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIF----GVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVAHMSMVIGGlmsmnwwGFMGSlFLMIGHGLCSSGLFCLSNIIYER----LGSRSLLINKGMINIMPSM 230
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILAA-------PLVGG-LYALAHGLVKSTLFLCAGALPSRnfteLISQMLGIGKWIPLTMASF 338
|
..
gi 1496231257 231 SL 232
Cdd:PRK07234 339 SI 340
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-284 |
2.34e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 61.52 E-value: 2.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 18 GYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLL------YDFGSVYVMFYIFMIlAFLVKMPIFLFHLWL 91
Cdd:PRK12665 154 GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVLLV-AFGIKAAVFPLSFWL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 92 PKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIIsFLGLKFNYFWMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSM 171
Cdd:PRK12665 233 PDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGY 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 172 VIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLI 251
Cdd:PRK12665 312 MVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFI 391
|
250 260 270
....*....|....*....|....*....|...
gi 1496231257 252 GELSLLNSIISWSTFMFLSLIFLSFFSAVYTLY 284
Cdd:PRK12665 392 GKVALLEAGAEDGTWLAWALVAGGVVTSLLTLY 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
71-285 |
9.59e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 9.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 71 YIFMILAFLV----KMPIFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIISfLGLKFNYFWMSLGLFGGV 145
Cdd:PRK12646 209 FIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITML 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 146 IVSFICFRQIDLKSLIAYSSVAH----MSMV-IGGLMSMNWWGFM---------GSLFLMIGHGLCSSGLFCLSNIIYER 211
Cdd:PRK12646 287 FGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 212 LGSRSLLINKGMINIMPSMSLwWFLLSSSNMAAPPSLNliGELS---LLNSIISWSTFMFLSLIFL----------SFFS 278
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN--GFLSkemFLDALTQTGQLSQFSLISMiiivfigviaSIFT 443
|
....*..
gi 1496231257 279 AVYTLYM 285
Cdd:PRK12646 444 FTYALYM 450
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
74-249 |
3.46e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.98 E-value: 3.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 74 MILAFL---VKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkIISFLG---LKFNYFWMSLGLFGGVIV 147
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 148 SFICFRQIDLKSLIAYSSVAHM---SMVIG--------GLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRS 216
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIgiiFVGLGlamvfiayGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRD 370
|
170 180 190
....*....|....*....|....*....|...
gi 1496231257 217 LLINKGMINIMPSMSlWWFLLSSSNMAAPPSLN 249
Cdd:PRK06521 371 MEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-285 |
4.72e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 54.33 E-value: 4.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 17 WGYQPERLQAGI-YLIFYTLVASLPLLIV--LFNVYFCFNTLYFPLLYDFGSVYV--MFYIFMILAFLVKMPIFLFHLWL 91
Cdd:PRK08376 164 RNDTWEAIEAGIkYMFVGSLASSMVLLGIalLYGQYGTLNMAYLAVKMSENPTVVakIALALFIAGLAMKSGAVPVHMWL 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 92 PKAHVEAPISGSMILagVLLKLGG-YGIFRVMkiisflglkFNYFWMSLGLF--GGVIVSFICFR----------QIDLK 158
Cdd:PRK08376 244 PDAYPAAPSSISAML--LVIKQAGlYALARVL---------FSIYGPAINLAtvGWVIIILGCLTmfvgvamavvQKDVK 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 159 SLIAYSSVAH---------MSMVIGGLMSMNWWGFM---GSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINI 226
Cdd:PRK08376 313 RLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLART 392
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231257 227 MPsMSLWWFLLSSSNMAAPPSLN------LIGELS-LLNSIISWSTFMFLSLIFLSFFSAVYTLYM 285
Cdd:PRK08376 393 MP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
74-246 |
6.60e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 53.62 E-value: 6.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 74 MILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKIISFLGLKFNYFWM--SLGLFGGVIVSFIC 151
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 152 FRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMS 231
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 1496231257 232 LWWFLLSSSNMAAPP 246
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
18-283 |
9.88e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 53.03 E-value: 9.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 18 GYQPERLQAGIYLIFYTLVASLPLLIVLFNVYFCFNTLYFPLL------YDFGSVYVMFYIFMILAFLVKMPIFLFHlWL 91
Cdd:PRK12663 151 GQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALLFLLAFGMKAALFPFM-WL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 92 PKAHVEAPISGSMILAGVLLKLGGYGIFRVM--------KIISFLGLKFNYFWMSLGLFGGVIvsficfrQIDLKSLIAY 163
Cdd:PRK12663 230 PAAYHTPNTEVAALFAALLTKVGIYALIRVFtllfpqerELLHPLLATMAAITMVIGALGALA-------YKDIRRIAGY 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 164 SSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMA 243
Cdd:PRK12663 303 QVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1496231257 244 APPSLNLIGELSLLNSIISWSTFMFLSLIFLSFFSAVYTL 283
Cdd:PRK12663 383 LPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-283 |
1.66e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 52.51 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 29 YLIFYTLVASLPLLIVLFNVYFCFNTLYFPLLYDFGSVYVMFYIFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAG 108
Cdd:PRK06589 171 YLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAV 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 109 VLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIV-----SFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWG 183
Cdd:PRK06589 251 IVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKA 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 184 FMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSMSLWWFLLSSSNMAAPPSLNLIGELSLL-----N 258
Cdd:PRK06589 331 LGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQ 410
|
250 260
....*....|....*....|....*
gi 1496231257 259 SIISWSTFMFLSLIFLSFFSAVYTL 283
Cdd:PRK06589 411 NQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
84-249 |
4.04e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 51.37 E-value: 4.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 84 IFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkIISFLGLKFNYFWMSLGLFGGVIVSFI----CFRQIDLKS 159
Cdd:PRK08042 196 IIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQR 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 160 LIAYSSVAHMSMVIGGL------MSMNW-----WGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMP 228
Cdd:PRK08042 272 LLAYHTLENIGIILLGLgagvtgIALEQpaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|.
gi 1496231257 229 SMSLwWFLLSSSNMAAPPSLN 249
Cdd:PRK08042 352 VISI-AMLVGLMAMAALPPLN 371
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
75-257 |
6.33e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.20 E-value: 6.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 75 ILAFLVKMPIFL------FHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMKIisflglkFNYFWMSLGLF 142
Cdd:PRK12650 209 VVAVLIAVAAFTksaqfpFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 143 GGVIVSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKG 222
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180 190
....*....|....*....|....*....|....*.
gi 1496231257 223 MINIMPsMSLWWFLLSSSNMAA-PPSLNLIGELSLL 257
Cdd:PRK12650 362 LWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGML 396
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
72-202 |
3.37e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 45.20 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIV--SF 149
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLvgNL 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1496231257 150 ICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLF 202
Cdd:PRK05777 287 AALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
71-246 |
3.63e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.35 E-value: 3.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 71 YIFMILAFLVKMPIFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIISFLGLKFNYFWMSLGLFGGVIVSF 149
Cdd:PRK06525 210 FLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 150 ICFRQIDLKSLIAYSSVAHMS-MVIGGLMSM--NWWGFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINI 226
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGyMFFGLSLAIlgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKK 368
|
170 180
....*....|....*....|
gi 1496231257 227 MPSMSLWWFLLSSSNMAAPP 246
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPP 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
72-202 |
7.90e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.17 E-value: 7.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK-IISFLGLKFNYFWMSLGLFGGVIVSFI 150
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFG 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1496231257 151 CFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLF 202
Cdd:TIGR01770 287 ALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
72-202 |
3.02e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 42.41 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIF-RVMkIISFLGLKFNYFWMslglFGGVIV--- 147
Cdd:COG1007 207 VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRLL-VEAFPGLAADWQLL----LAVLAVlsm 280
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231257 148 ---SFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSSGLF 202
Cdd:COG1007 281 tvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
51-283 |
4.05e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.55 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 51 CFNTLYFPLLYDFGSVYVMFYIFMILAFLVKMPIFLFHLWLPKAHVEAPISGSMILAgVLLKLGgygifrVMKIISFLGL 130
Cdd:MTH00196 78 YINLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG------IFSILVSIGL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 131 KFNYFwMSLGLFGGVIVSFICFRQIDLKSLIAYSSVAHMSMVIGGLMSMNWWGFMGSLFLMIGHGLCSsglFCLSNIIYE 210
Cdd:MTH00196 151 NVNIL-LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILA 226
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231257 211 RLGSRSLLIN-KGMINIMPSMSLWWFLLSSSNMAAPPSLNLIGE-LSLLNSIISWSTFMFLSLIFLSFFSAVYTL 283
Cdd:MTH00196 227 LNVYKNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYV 301
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
72-260 |
1.85e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 72 IFMILAFLVKMPIFLFHL--WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKI-ISFLGLKFNYFWMSLGLFGGVIVS 148
Cdd:PRK06459 162 ILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILtQTIPIGYFGLTILAIGAFSILFGA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 149 FICFRQIDLKSLIAYSSV----AHMSMVIGGLMSMNWWGFMGSLFLM------IGHGLCSSGLFCLSNIIYERLGSRSLL 218
Cdd:PRK06459 242 LYAYVSENVKGLLAFSTIenngAILVALGLYMVTKQLITSIEHFSLItvilysFAHSVAKTGLFLSSGLQEKQSITYSKK 321
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1496231257 219 INKGMinimpsMSLWWFLLSSSNMAAPPSLNLIGELSLLNSI 260
Cdd:PRK06459 322 IRNRW------IELGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-249 |
1.95e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.81 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 66 VYVMFYIFMILAFLVKMPIFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIISflGLKFNYFWMS-LGLFG 143
Cdd:PRK12649 212 LFLITLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgTGMIT 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 144 GVIVSFICFRQIDLKSLIAYSSVAHMSMviggLMSMNWW--------GFMGSLFLMIGHGLCSSGLFCLSNIIYERLGSR 215
Cdd:PRK12649 289 MVLAGFLAFRQTDIKAILAYSTISQLAY----LMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAATR 364
|
170 180 190
....*....|....*....|....*....|....
gi 1496231257 216 SLLINKGMINIMPsMSLWWFLLSSSNMAAPPSLN 249
Cdd:PRK12649 365 DIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
85-249 |
2.25e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.91 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 85 FLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKIISFLGLkfnYFW--MSLGLFGGVIVSFICFRQIDLKSLI 161
Cdd:PRK12645 227 FPFYIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVARFTPIFAGSQV---WFWtvTLVGLITLFWGSLNAVKQTDLKGIL 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 162 AYSSVAH----MSMVIGGLMSMNWWG---------FMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMP 228
Cdd:PRK12645 303 AFSTVSQlgliMSLLGIGAASLHYQGddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMP 382
|
170 180
....*....|....*....|.
gi 1496231257 229 sMSLWWFLLSSSNMAAPPSLN 249
Cdd:PRK12645 383 -ITFTIALIGALSMAGLPPFN 402
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
85-275 |
2.66e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 39.52 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 85 FLFHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKIISFLGLKFNYFWmSLGLFGG---VIVSFICFRQ 154
Cdd:PRK12647 212 FPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQT-ILPLFGGltmLTGALLAVRQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 155 IDLKSLIAYSSVahmsMVIGGLMSMNWWG----FMGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPSM 230
Cdd:PRK12647 281 TDLKLILAYSTV----SALGTLVMLLGLGselaIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPIT 356
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1496231257 231 SLWWFLLSSSNMAAPPSLNLIGELSLLNSII---SWSTFmFLSLIFLS 275
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLAKELIYEALLeapLWSLI-LTVAAVLG 403
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
85-286 |
6.97e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 38.21 E-value: 6.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 85 FLFHLWLPKAhVEAPISGS-------MILAGVLLklggygifrVMKIISFLGLKFNYFW--MSLGLFGGVIVSFICFRQI 155
Cdd:COG1009 228 FPLHFWLPDA-MEGPTPVSallhaatMVKAGVYL---------LARLSPLFALSPVWLTvvAIIGAITALFAALIALAQT 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231257 156 DLKSLIAYSSVAHMSMVIGGLMSMNWWgfmGSLFLMIGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINIMPsMSLWWF 235
Cdd:COG1009 298 DIKRVLAYSTVSQLGYMFLALGVGAYV---AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITF 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1496231257 236 LLSSSNMAA-PPSLNLIGELSLLNSII---SWSTFMFLSLIFLSFFSAVYTLYMY 286
Cdd:COG1009 374 LIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
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