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Conserved domains on  [gi|1496231080|gb|AYN73154|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Paulinia acuminata]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.15e-140

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 397.22  E-value: 8.15e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231080 245 TLVFLGGDFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFWFKTFYI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.15e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 397.22  E-value: 8.15e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231080 245 TLVFLGGDFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFWFKTFYI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-297 2.92e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.28  E-value: 2.92e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  13 VILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLMISLVIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  93 CIFPYLTYM--CSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSYNMYN 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 171 FMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1496231080 251 G------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 5.04e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.92  E-value: 5.04e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   4 DLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVL 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  84 NLMISLVIWCIFPYLTYMC--SFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 162 LLGSYNMYNFMIYQY-YCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1496231080 241 SMLMTLVFLGG--------DFYS----FMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 8.15e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 397.22  E-value: 8.15e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1496231080 245 TLVFLGGDFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFWFKTFYI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-298 8.58e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 358.96  E-value: 8.58e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   7 MFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLM 86
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  87 ISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSY 166
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 167 NMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTL 246
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1496231080 247 VFLGGDFYSFMFFLKLSIML--FIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLN 298
Cdd:MTH00225  242 LFFGGFFVTIDLFLILKIMLlaFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLA 295
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-298 3.33e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 324.52  E-value: 3.33e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   6 FMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  86 MISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 166 YNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMT 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231080 246 LVFLGGDF-----YSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLN 298
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLS 298
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 9-297 2.13e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 294.90  E-value: 2.13e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   9 ILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLMIS 88
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  89 LVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSYNM 168
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 169 YNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTLVF 248
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1496231080 249 LGGDFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-297 4.18e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 291.26  E-value: 4.18e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1496231080 245 TLVFLGGDfYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-297 1.41e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 285.36  E-value: 1.41e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 245 TLVFLGGDFYSFM-------FFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00071  244 TILFLGSTYNHLQpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-297 2.50e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 284.87  E-value: 2.50e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 165 SYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 245 TLVFLGGDFYS-----FMFFLKLSIMLF--IFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00111  244 TILFLNPSTLNlppelFTINLMTKTLLLtsGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-297 6.10e-95

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 283.82  E-value: 6.10e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   7 MFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  87 ISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSY 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 167 NMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231080 247 VFLGG-------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
NADHdh pfam00146
NADH dehydrogenase;
13-297 2.92e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.28  E-value: 2.92e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  13 VILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLMISLVIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  93 CIFPYLTYM--CSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSYNMYN 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 171 FMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1496231080 251 G------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-314 1.48e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 280.32  E-value: 1.48e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   3 YDLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPV 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  83 LNLMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 163 LGSYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 243 LMTLVFLGGDFYSFMFF--------LKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSLNFLFFFWFKTFYIFIIL 314
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-297 2.06e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 274.95  E-value: 2.06e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   1 MFYDLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  81 PVLNLMISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 161 ILLGSYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1496231080 241 SMLMTLVFLGGDFY-------SFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-297 3.05e-89

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 268.96  E-value: 3.05e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   8 FILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  88 SLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGSYN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 168 MyNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTLV 247
Cdd:MTH00010  165 F-SKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1496231080 248 FLGGDFYSF----MFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00010  244 FTSFIPSIFisdlMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSL 297
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 5.04e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 268.92  E-value: 5.04e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   4 DLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVL 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  84 NLMISLVIWCIFPYLTYMC--SFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 162 LLGSYNMYNFMIYQY-YCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1496231080 241 SMLMTLVFLGG--------DFYS----FMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 2.72e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 251.65  E-value: 2.72e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLTY--MCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 163 LGSYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231080 243 LMTLVFLGG----------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-297 1.12e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 245.02  E-value: 1.12e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   5 LFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  85 LMISLVIWCIFPYLT--YMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 163 LGSYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1496231080 243 LMTLVFLGGDFY----------SFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00054  241 FGVILFLGGWLVisgptsyfsnFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-297 4.16e-79

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 243.49  E-value: 4.16e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   1 MFYDLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  81 PVLNLMISLVIWCIFPYL--TYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 159 LIILLGSYNMYNFMIYQY-YCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1496231080 238 MFMSMLMTLVFLGG--------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSL 308
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-297 2.41e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.81  E-value: 2.41e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   3 YDLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPV 82
Cdd:MTH00029    4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  83 LNLMISLVIWCIFPYL--TYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00029   84 ISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 161 ILLGSYNMYNFMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFM 240
Cdd:MTH00029  164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 241 SMLMTLVFLGG-----------------------DFYSFMFFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00029  244 SCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-297 2.51e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 199.35  E-value: 2.51e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  11 NFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNLMISLV 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  91 IWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLiillgsynMYN 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSI--------MLH 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 171 FMIYQYYCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLMTLVFLg 250
Cdd:MTH00090  153 NNSFSFVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1496231080 251 gDFYSFMFFLKLSIMLFIfiwvRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIFI----RSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-297 3.90e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.48  E-value: 3.90e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   6 FMFILNFVILLICVLLsVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSPVLNL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  86 MISLVIWCIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILLGS 165
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 166 YNMYNFMiyqYYCWFMIISFPLFLSCFASC-LAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFMSMLM 244
Cdd:MTH00058  161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1496231080 245 TLVFLGGDFYSFMfflkLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFLPLSL 297
Cdd:MTH00058  238 SVLFFGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-297 3.77e-30

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 116.97  E-value: 3.77e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   2 FYDLFMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPILSNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  82 ---VLNLMIS-LVIwcIFPYLTYMCSFPYGFLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILL 157
Cdd:CHL00032  103 siaVISILLSyLVI--PFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 158 SLIILLGSYNMYN-------FMIYQYYCWFMIISFPLFlscFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIF 230
Cdd:CHL00032  181 SISLLSNSLSTVDiveaqskYGFWGWNLWRQPIGFIVF---LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 231 LAEYTSIMFMSMLMTLVFLGG-----------DFYS--------------FMFFLKLSIMLFIFIWVRGTLPRFRYDKLM 285
Cdd:CHL00032  258 VASYLNLLVSSLFVTVLYLGGwnlsipyifipELFEinktggvfgttigiFITLAKTYLFLFISITTRWTLPRLRMDQLL 337

                         330
                  ....*....|..
gi 1496231080 286 YLAWSSFLPLSL 297
Cdd:CHL00032  338 NLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-293 8.53e-22

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 92.94  E-value: 8.53e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080   6 FMFILNFVILLICVLLSVAFLTLLERKVLGYIQIRKGPnkvgflGIPQPFSDAIKLICKEQPIPILSNyLLYYFSPVLNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080  86 MISLVIWCIFPYLTYMCSFPYG--FLFFMCCTGLSVYTIMIAGWSSNSNYSLLGSMRSVAQTISYEVSLALILLSLIILL 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1496231080 164 GSYNMYNFMIYQY---YCWFMIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIMFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1496231080 241 SMLMTLVFLGGDFYSFM------FFLKLSIMLFIFIWVRGTLPRFRYDKLMYLAWSSFL 293
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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