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Conserved domains on  [gi|1494235699|gb|AYM85018|]
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NADH dehydrogenase subunit 3 [Petamella prosternalis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.76e-40

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 128.74  E-value: 5.76e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   3 TLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1494235699  83 TSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.76e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 128.74  E-value: 5.76e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   3 TLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1494235699  83 TSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 4.79e-22

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 82.86  E-value: 4.79e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699  19 MLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKtSNIMVWTMSSMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1494235699  99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 9.98e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 77.47  E-value: 9.98e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  88 -VWTMssMFFIMVLLGGLYHEWNQGALQW 115
Cdd:COG0838    91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 5.76e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 128.74  E-value: 5.76e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   3 TLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1494235699  83 TSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-117 2.56e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 124.97  E-value: 2.56e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-117 6.38e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 118.94  E-value: 6.38e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 1.18e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 110.72  E-value: 1.18e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 5.88e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 95.78  E-value: 5.88e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISfiipMIVMLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00106    4 MLTLLTNTLLA----SLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 7.13e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 93.12  E-value: 7.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSInDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-116 3.01e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 91.48  E-value: 3.01e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   3 TLSTSIMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMK 82
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1494235699  83 TSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 3.52e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 88.82  E-value: 3.52e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  81 MKTSNIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 8-117 8.38e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 85.43  E-value: 8.38e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILS---KKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKTS 84
Cdd:MTH00069    2 IMLMLLISTILSLILITISfwlPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1494235699  85 NIMVWTMSSMFFIMVLLGGLYHEWNQGALQWAE 117
Cdd:MTH00069   82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 4.79e-22

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 82.86  E-value: 4.79e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699  19 MLIATILSKKSINdREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKtSNIMVWTMSSMFFIM 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1494235699  99 VLLGGLYHEWNQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.12e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 82.25  E-value: 1.12e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIAtILSKKSINDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1494235699  81 MKTSNimVWTMSSMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00203   80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-116 8.91e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 80.29  E-value: 8.91e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKTSNiM 87
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-W 92

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  88 VWTMSSMFFIMVLLGGLYHEWNQGALQWA 116
Cdd:PRK06602   93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 9.98e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 77.47  E-value: 9.98e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKTSNIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  88 -VWTMssMFFIMVLLGGLYHEWNQGALQW 115
Cdd:COG0838    91 gLIEM--LVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-115 7.48e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 70.09  E-value: 7.48e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMK-TSNI 86
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNqIAPF 85

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  87 MVWTMssMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00018   86 GFWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 8-115 1.45e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 67.04  E-value: 1.45e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKTSNIM 87
Cdd:MTH00055   12 LLFSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLF 90

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  88 -VWTMssMFFIMVLLGGLYHEWNQGALQW 115
Cdd:MTH00055   91 gFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 3-115 9.08e-12

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 57.25  E-value: 9.08e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   3 TLSTSIMISFIIPMIVMLIATILSKKSIN----DREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIV 78
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWS 86

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1494235699  79 IIMKTSNIMVWTMSSMFFIMVLLgGLYHEWNQGALQW 115
Cdd:MTH00030   87 IVFNQLNLFSFWIVYTFLIVLAI-GLAYEWIKGGLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
8-115 1.68e-06

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 43.58  E-value: 1.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   8 IMISFIIPMIVMLIATILSKKSINDrEKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVIIMKtsNIM 87
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYD--KLG 92

                          90       100
                  ....*....|....*....|....*....
gi 1494235699  88 VWTMSSMF-FIMVLLGGLYHEWNQGALQW 115
Cdd:PRK07756   93 LFALIEMLiFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 2.65e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 2.65e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   1 MLTLSTSIMISFIIPMIVMLIATILSKKSiNDREKSSPFECGFDPKSSARMPFSLRFFLIAVIFLIFDVEIVLILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1494235699  81 MKTSNIMVWTMssMFFImvlLGGLYHEWNQGALQW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 7.57e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 39.27  E-value: 7.57e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699  19 MLIATILSKKSINdREKSSPFECGFDPKSSARMP--FSLRFFLIAVIFLIFDVEIVLILPIVIIMKTSNIMVWTMSSMFF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFM 100

                          90
                  ....*....|....*....
gi 1494235699  97 IMVLLGGLYhEWNQGALQW 115
Cdd:PRK07928  101 LTVFVAYAY-VWRRGGLEW 118
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
9-115 2.58e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 37.72  E-value: 2.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235699   9 MISFIIPMIVMLIATILSKKSIN-DRE--KSSPFECGFDP-KSSARMpfSLRFFLIAVIFLIFDVEIVLILPIVIIMKTS 84
Cdd:PRK08489   18 VLTFVAFFLTTRLARFISRKLAQkNTEklKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLL 95

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1494235699  85 NIMVwtMSSMF-FIMVLLGGLYHEWNQGALQW 115
Cdd:PRK08489   96 GLFG--LIEMLlFIVLLTIGFIYAWKKGALEW 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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