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Conserved domains on  [gi|1494235649|gb|AYM84972|]
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NADH dehydrogenase subunit 1 [Ommatolampis quadrimaculata]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 4-309 5.15e-148

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 5.15e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIE 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 164 SYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 244 TLIFLGGDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 4-309 5.15e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 5.15e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIE 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 164 SYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 244 TLIFLGGDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
12-301 1.66e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.36  E-value: 1.66e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  12 ILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNLMISLFIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  92 IVFPYLTYM--CSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIESYNMYM 169
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 170 FMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLITLIFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1494235649 250 G------DFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-309 3.44e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.00  E-value: 3.44e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   3 DLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIF 82
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  83 NLMISLFIWIVFPYLTYMC--SFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIL 160
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 161 LIESYNMYMFMGYQF-YCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 240 SMLITLIFLGG--------DFYSY----MFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKI 307
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1494235649 308 LL 309
Cdd:COG1005   327 LF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 4-309 5.15e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 418.02  E-value: 5.15e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIE 163
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 164 SYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 244 TLIFLGGDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILL 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 5-307 2.06e-126

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 363.20  E-value: 2.06e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   5 IMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNL 84
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  85 MISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIES 164
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 165 YNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLIT 244
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1494235649 245 LIFLGGDFY--SYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKI 307
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 5-305 3.65e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 339.92  E-value: 3.65e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   5 IMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNL 84
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  85 MISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIES 164
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 165 YNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLIT 244
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 245 LIFLGGDFYSY-----MFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGL 305
Cdd:MTH00143  241 VLFFGGSSVLFllggvVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 4-312 3.76e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 314.54  E-value: 3.76e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIE 163
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 164 SYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235649 244 TLIFLGGDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLISL 312
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASL 309
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-312 1.11e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 306.16  E-value: 1.11e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   1 MYDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSP 80
Cdd:MTH00071    1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  81 IFNLMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIL 160
Cdd:MTH00071   81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 161 LIESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMS 240
Cdd:MTH00071  161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235649 241 MLITLIFLGGDFYSYMFYM-------KLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLISL 312
Cdd:MTH00071  241 TLSTILFLGSTYNHLQPELstmnlmiKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-312 7.25e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 304.13  E-value: 7.25e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   1 MYDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSP 80
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  81 IFNLMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIL 160
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 161 LIESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMS 240
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235649 241 MLITLIFL-------GGDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLISL 312
Cdd:MTH00111  241 TLTTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGL 319
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 4-309 1.89e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 302.43  E-value: 1.89e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIE 163
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 164 SYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 244 TLIFLGGDfYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILL 309
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 6-312 3.83e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 301.93  E-value: 3.83e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   6 MFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNLM 85
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  86 ISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIESY 165
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 166 NMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLITL 245
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1494235649 246 IFLGGDFYSYM-------FYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLISL 312
Cdd:MTH00104  241 LFLGAFHNPYMpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-312 3.97e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 291.90  E-value: 3.97e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   1 MYDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSP 80
Cdd:MTH00134    2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  81 IFNLMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIL 160
Cdd:MTH00134   82 MLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVII 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 161 LIESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMS 240
Cdd:MTH00134  162 FTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMN 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1494235649 241 MLITLIFLGGDFYSYM-------FYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLISL 312
Cdd:MTH00134  242 TLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-309 1.09e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 288.41  E-value: 1.09e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   2 YDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPI 81
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  82 FNLMISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILL 161
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 162 IESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSM 241
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 242 LITLIFLGGDFYSYMFY--------MKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILL 309
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
12-301 1.66e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.36  E-value: 1.66e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  12 ILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNLMISLFIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  92 IVFPYLTYM--CSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIESYNMYM 169
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 170 FMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLITLIFLG 249
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1494235649 250 G------DFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-310 2.63e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 279.36  E-value: 2.63e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   5 IMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNL 84
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  85 MISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIES 164
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 165 YNMYMFMGYQfYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLIT 244
Cdd:MTH00010  163 FSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 245 LIFLG----GDFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKILLI 310
Cdd:MTH00010  242 VFFTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-309 3.44e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 267.00  E-value: 3.44e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   3 DLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIF 82
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  83 NLMISLFIWIVFPYLTYMC--SFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIL 160
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 161 LIESYNMYMFMGYQF-YCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 239
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 240 SMLITLIFLGG--------DFYSY----MFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKI 307
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLpgilWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVL 326


                  ..
gi 1494235649 308 LL 309
Cdd:COG1005   327 LF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-305 1.00e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 252.73  E-value: 1.00e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   1 MYDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSP 80
Cdd:MTH00216    2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  81 IFNLMISLFIWIVFPYL--TYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 158
Cdd:MTH00216   82 VLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 159 ILLIESYNMYMFMGYQF-YCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSII 237
Cdd:MTH00216  162 LLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 238 FMSMLITLIFLGG--------DFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGL 305
Cdd:MTH00216  242 LMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 4-307 2.61e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 251.57  E-value: 2.61e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLT--YMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILL 161
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 162 IESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSM 241
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1494235649 242 LITLIFLGGDFYSY----------MFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKI 307
Cdd:MTH00054  241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-296 6.54e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 250.49  E-value: 6.54e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   4 LIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFN 83
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  84 LMISLFIWIVFPYLTY--MCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILL 161
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 162 IESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSM 241
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1494235649 242 LITLIFLGG----------DFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 296
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-307 3.75e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.04  E-value: 3.75e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   1 MYDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSP 80
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  81 IFNLMISLFIW--IVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 158
Cdd:MTH00029   83 IISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 159 ILLIESYNMYMFMGYQFYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIF 238
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 239 MSMLITLIFLGG-----------------------DFYSYMFYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLS 295
Cdd:MTH00029  243 MSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|..
gi 1494235649 296 LNFLIFFIGLKI 307
Cdd:MTH00029  323 LGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 10-307 8.27e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 200.51  E-value: 8.27e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  10 NFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNLMISLF 89
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  90 IWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVslaLILLSLILLIESYNMYM 169
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEI---AFSLYLLSIMLHNNSFS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 170 FMGYqfycwFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLITLIFLg 249
Cdd:MTH00090  158 FVSS-----FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1494235649 250 gDFYSYMFYMKLSIMSFIfiwvRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGLKI 307
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIFI----RSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-303 1.57e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.94  E-value: 1.57e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   5 IMFILNFILLVICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPIFNL 84
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  85 MISLFIWIVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLIES 164
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 165 YNMYMFMgyqFYCWFLIISFPLFLSCFASC-LAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFMSMLI 243
Cdd:MTH00058  161 YSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 244 TLIFLGGDFYSYMFYMKLsimsFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFI 303
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-310 1.68e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 120.83  E-value: 1.68e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   2 YDLIMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLICKEQPIPIMSNYFLYYFSPI 81
Cdd:CHL00032   24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPS 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  82 FnLMISLFIW---IVFPYLTYMCSFNYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 158
Cdd:CHL00032  104 I-AVISILLSylvIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 159 ILLIESYNM---------YMFMGYQfyCWFLIISFPLFlscFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIF 229
Cdd:CHL00032  183 SLLSNSLSTvdiveaqskYGFWGWN--LWRQPIGFIVF---LISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 230 LAEYTSIIFMSMLITLIFLGGDFYS--YMFYMKLSIMS-----------------------FIFIWVRGTLPRFRYDKLM 284
Cdd:CHL00032  258 VASYLNLLVSSLFVTVLYLGGWNLSipYIFIPELFEINktggvfgttigifitlaktylflFISITTRWTLPRLRMDQLL 337

                         330       340
                  ....*....|....*....|....*.
gi 1494235649 285 YLAWKSFLPLSLNFLIFFIGLKILLI 310
Cdd:CHL00032  338 NLGWKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
5-303 3.38e-21

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 91.40  E-value: 3.38e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649   5 IMFILNFILLVICVLISVAFLTLLERKVLGYIQIRKGPnkvgfvGIPQPFSDAIKLICKEQPIPIMSNyFLYYFSPIFNL 84
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649  85 MISLFIWIVFPYLTYMCSFNYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLILLI 162
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 163 ESYNMYMFMGYQ---FYCWFLIISFPLFLSCFASCLAETNRTPFDFAEGESELVSGFNIEYGSGGFTLIFLAEYTSIIFM 239
Cdd:COG0650   154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1494235649 240 SMLITLIFLGGDFYSYM------FYMKLSIMSFIFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFI 303
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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