NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|149243407]
View 

Chain B, Renilla-luciferin 2-monooxygenase

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK03592 super family cl46905
haloalkane dehalogenase; Provisional
 25-306 6.74e-108

haloalkane dehalogenase; Provisional


The actual alignment was detected with superfamily member PRK03592:

Pssm-ID: 481245  Cd Length: 295  Bit Score: 316.17  E-value: 6.74e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  25 KQMNVLDSFINYYDSEKHaeNAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSgNGSYRLLDHYKYLTAW 104
Cdd:PRK03592  10 RRVEVLGSRMAYIETGEG--DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKP-DIDYTFADHARYLDAW 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 105 FELLNLpKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIEsWDEWP-DIEEDIALIKS-EEGEKMVLENNFFV 182
Cdd:PRK03592  87 FDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT-WDDFPpAVRELFQALRSpGEGEEMVLEENVFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 183 ETVLPSKIMRKLEPEEFAAYLEPFKEKgEVRRPTLSWPREIPLvkGGKP-DVVQIVRNYNAYLRASdDLPKLFIESDPGF 261
Cdd:PRK03592 165 ERVLPGSILRPLSDEEMAVYRRPFPTP-ESRRPTLSWPRELPI--DGEPaDVVALVEEYAQWLATS-DVPKLLINAEPGA 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 149243407 262 --FSNAIVEGAKKFPNTEFVKV--KGLHFLQEDAPDEMGKYIKSFVERV 306
Cdd:PRK03592 241 ilTTGAIRDWCRSWPNQLEITVfgAGLHFAQEDSPEEIGAAIAAWLRRL 289
 
Name Accession Description Interval E-value
PRK03592 PRK03592
haloalkane dehalogenase; Provisional
 25-306 6.74e-108

haloalkane dehalogenase; Provisional


Pssm-ID: 235135  Cd Length: 295  Bit Score: 316.17  E-value: 6.74e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  25 KQMNVLDSFINYYDSEKHaeNAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSgNGSYRLLDHYKYLTAW 104
Cdd:PRK03592  10 RRVEVLGSRMAYIETGEG--DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKP-DIDYTFADHARYLDAW 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 105 FELLNLpKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIEsWDEWP-DIEEDIALIKS-EEGEKMVLENNFFV 182
Cdd:PRK03592  87 FDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT-WDDFPpAVRELFQALRSpGEGEEMVLEENVFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 183 ETVLPSKIMRKLEPEEFAAYLEPFKEKgEVRRPTLSWPREIPLvkGGKP-DVVQIVRNYNAYLRASdDLPKLFIESDPGF 261
Cdd:PRK03592 165 ERVLPGSILRPLSDEEMAVYRRPFPTP-ESRRPTLSWPRELPI--DGEPaDVVALVEEYAQWLATS-DVPKLLINAEPGA 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 149243407 262 --FSNAIVEGAKKFPNTEFVKV--KGLHFLQEDAPDEMGKYIKSFVERV 306
Cdd:PRK03592 241 ilTTGAIRDWCRSWPNQLEITVfgAGLHFAQEDSPEEIGAAIAAWLRRL 289
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
 45-292 8.67e-42

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 144.95  E-value: 8.67e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407   45 NAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGN-GSYRLLDHYKYLtAWFELLNLPKKIIFVGHDWG 122
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSRPKAqDDYRTDDLAEDL-EYILEALGLEKVNLVGHSMG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  123 AALAFHYAYEHQDRIKAIVHMESvvdvIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAY 202
Cdd:pfam00561  80 GLIALAYAAKYPDRVKALVLLGA----LDPPHELDEADRFILALFPGFFDGFVADFAPNPLGRLVAKLLALLLLRLRLLK 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  203 LEPfkeKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFI--ESDPGFFSNAIVEGAKKFPN-TEFV 279
Cdd:pfam00561 156 ALP---LLNKRFPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIwgDQDPLVPPQALEKLAQLFPNaRLVV 232

                         250
                  ....*....|...
gi 149243407  280 KVKGLHFLQEDAP 292
Cdd:pfam00561 233 IPDAGHFAFLEGP 245
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
 34-306 1.38e-24

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 98.92  E-value: 1.38e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  34 INYYDSEKHAEnAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGnGSYRLLDHYKYLTAWFELLNLpKK 113
Cdd:COG0596   14 LHYREAGPDGP-PVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPA-GGYTLDDLADDLAALLDALGL-ER 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 114 IIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALikseegekmvlennffvetvlpsKIMRK 193
Cdd:COG0596   91 VVLVGHSMGGMVALELAARHPERVAGLVLVDEVLAALAEPLRRPGLAPEALA-----------------------ALLRA 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 194 LEPEEFAAYLEpfkekgEVRRPTLswpreipLVKGGKPDVVQivrnynayLRASDDLpklfiesdpgffsnaivegAKKF 273
Cdd:COG0596  148 LARTDLRERLA------RITVPTL-------VIWGEKDPIVP--------PALARRL-------------------AELL 187

                        250       260       270
                 ....*....|....*....|....*....|....
gi 149243407 274 PNTEFVKVKGL-HFLQEDAPDEMGKYIKSFVERV 306
Cdd:COG0596  188 PNAELVVLPGAgHFPPLEQPEAFAAALRDFLARL 221
 
Name Accession Description Interval E-value
PRK03592 PRK03592
haloalkane dehalogenase; Provisional
 25-306 6.74e-108

haloalkane dehalogenase; Provisional


Pssm-ID: 235135  Cd Length: 295  Bit Score: 316.17  E-value: 6.74e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  25 KQMNVLDSFINYYDSEKHaeNAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSgNGSYRLLDHYKYLTAW 104
Cdd:PRK03592  10 RRVEVLGSRMAYIETGEG--DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKP-DIDYTFADHARYLDAW 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 105 FELLNLpKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIEsWDEWP-DIEEDIALIKS-EEGEKMVLENNFFV 182
Cdd:PRK03592  87 FDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT-WDDFPpAVRELFQALRSpGEGEEMVLEENVFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 183 ETVLPSKIMRKLEPEEFAAYLEPFKEKgEVRRPTLSWPREIPLvkGGKP-DVVQIVRNYNAYLRASdDLPKLFIESDPGF 261
Cdd:PRK03592 165 ERVLPGSILRPLSDEEMAVYRRPFPTP-ESRRPTLSWPRELPI--DGEPaDVVALVEEYAQWLATS-DVPKLLINAEPGA 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 149243407 262 --FSNAIVEGAKKFPNTEFVKV--KGLHFLQEDAPDEMGKYIKSFVERV 306
Cdd:PRK03592 241 ilTTGAIRDWCRSWPNQLEITVfgAGLHFAQEDSPEEIGAAIAAWLRRL 289
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
 45-292 8.67e-42

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 144.95  E-value: 8.67e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407   45 NAVIFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGN-GSYRLLDHYKYLtAWFELLNLPKKIIFVGHDWG 122
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSRPKAqDDYRTDDLAEDL-EYILEALGLEKVNLVGHSMG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  123 AALAFHYAYEHQDRIKAIVHMESvvdvIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAY 202
Cdd:pfam00561  80 GLIALAYAAKYPDRVKALVLLGA----LDPPHELDEADRFILALFPGFFDGFVADFAPNPLGRLVAKLLALLLLRLRLLK 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  203 LEPfkeKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFI--ESDPGFFSNAIVEGAKKFPN-TEFV 279
Cdd:pfam00561 156 ALP---LLNKRFPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIwgDQDPLVPPQALEKLAQLFPNaRLVV 232

                         250
                  ....*....|...
gi 149243407  280 KVKGLHFLQEDAP 292
Cdd:pfam00561 233 IPDAGHFAFLEGP 245
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
 34-306 1.38e-24

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 98.92  E-value: 1.38e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  34 INYYDSEKHAEnAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGnGSYRLLDHYKYLTAWFELLNLpKK 113
Cdd:COG0596   14 LHYREAGPDGP-PVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDKPA-GGYTLDDLADDLAALLDALGL-ER 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 114 IIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALikseegekmvlennffvetvlpsKIMRK 193
Cdd:COG0596   91 VVLVGHSMGGMVALELAARHPERVAGLVLVDEVLAALAEPLRRPGLAPEALA-----------------------ALLRA 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 194 LEPEEFAAYLEpfkekgEVRRPTLswpreipLVKGGKPDVVQivrnynayLRASDDLpklfiesdpgffsnaivegAKKF 273
Cdd:COG0596  148 LARTDLRERLA------RITVPTL-------VIWGEKDPIVP--------PALARRL-------------------AELL 187

                        250       260       270
                 ....*....|....*....|....*....|....
gi 149243407 274 PNTEFVKVKGL-HFLQEDAPDEMGKYIKSFVERV 306
Cdd:COG0596  188 PNAELVVLPGAgHFPPLEQPEAFAAALRDFLARL 221
PRK00870 PRK00870
haloalkane dehalogenase; Provisional
 47-303 2.09e-23

haloalkane dehalogenase; Provisional


Pssm-ID: 179147 [Multi-domain]  Cd Length: 302  Bit Score: 97.73  E-value: 2.09e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  47 VIFLHGNATSSYLWRHVVPHIepVA---RCIIPDLIGMGKSGKSGN-GSYRLLDHYKYLTAWFELLNLpKKIIFVGHDWG 122
Cdd:PRK00870  49 VLLLHGEPSWSYLYRKMIPIL--AAaghRVIAPDLIGFGRSDKPTRrEDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWG 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 123 AALAFHYAYEHQDRIKAIVHMESVV-----DVIESWDEWPDIEEDIAlikseegekmvlenNFFVETVLPSKIMRKLEPE 197
Cdd:PRK00870 126 GLIGLRLAAEHPDRFARLVVANTGLptgdgPMPDAFWAWRAFSQYSP--------------VLPVGRLVNGGTVRDLSDA 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 198 EFAAYLEPFkekgevrrPTLSW---PREIPLVKGGKPDVVQIVRNYNAYlRASDDLPKLFI----ESDP-------GFfs 263
Cdd:PRK00870 192 VRAAYDAPF--------PDESYkagARAFPLLVPTSPDDPAVAANRAAW-AVLERWDKPFLtafsDSDPitgggdaIL-- 260

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 149243407 264 NAIVEGAKKFPNTEFvkVKGLHFLQEDAPDEMGKYIKSFV 303
Cdd:PRK00870 261 QKRIPGAAGQPHPTI--KGAGHFLQEDSGEELAEAVLEFI 298
PRK03204 PRK03204
haloalkane dehalogenase; Provisional
 47-299 5.18e-22

haloalkane dehalogenase; Provisional


Pssm-ID: 179554 [Multi-domain]  Cd Length: 286  Bit Score: 93.38  E-value: 5.18e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  47 VIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELLNLpKKIIFVGHDWGAALA 126
Cdd:PRK03204  37 ILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPIS 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 127 FHYAYEHQDRIKAIVHMESVVdvieswdeWP----DIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAY 202
Cdd:PRK03204 116 MAVAVERADRVRGVVLGNTWF--------WPadtlAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHY 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 203 --LEPFKEK--------GEVR--RPTLS-WPREIPLVKGGKPDVVqIVRNYNAYLRASDDLPKLfiesdpgffsnaiveg 269
Cdd:PRK03204 188 raVQPNAAArrgvaempKQILaaRPLLArLAREVPATLGTKPTLL-VWGMKDVAFRPKTILPRL---------------- 250

                        250       260       270
                 ....*....|....*....|....*....|.
gi 149243407 270 AKKFPNTEFVKVKGL-HFLQEDAPDEMGKYI 299
Cdd:PRK03204 251 RATFPDHVLVELPNAkHFIQEDAPDRIAAAI 281
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
46-141 4.18e-12

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 64.64  E-value: 4.18e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  46 AVIFLHGNATSSYLWRHVVPHIepVAR---CIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELL--NLPKKIIFVGHD 120
Cdd:COG2267   30 TVVLVHGLGEHSGRYAELAEAL--AAAgyaVLAFDLRGHGRSDGPRGHVDSFDDYVDDLRAALDALraRPGLPVVLLGHS 107

                         90       100
                 ....*....|....*....|.
gi 149243407 121 WGAALAFHYAYEHQDRIKAIV 141
Cdd:COG2267  108 MGGLIALLYAARYPDRVAGLV 128
PLN02980 PLN02980
2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate ...
 33-141 2.74e-07

2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding


Pssm-ID: 215530 [Multi-domain]  Cd Length: 1655  Bit Score: 52.17  E-value: 2.74e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407   33 FINYYDSEKHAENAV-IFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGS-----------------YRL 94
Cdd:PLN02980 1359 LIKVHEVGQNAEGSVvLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKetqteptlsvelvadllYKL 1438

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 149243407   95 LDHykyLTawfellnlPKKIIFVGHDWGAALAFHYAYEHQDRIKAIV 141
Cdd:PLN02980 1439 IEH---IT--------PGKVTLVGYSMGARIALYMALRFSDKIEGAV 1474
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
 47-130 1.11e-06

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 48.62  E-value: 1.11e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407   47 VIFLHGnatSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDhykyLTAWFELLNLPKKIIFVGHDWGAALA 126
Cdd:pfam12697   1 VVLVHG---AGLSAAPLAALLAAGVAVLAPDLPGHGSSSPPPLDLADLAD----LAALLDELGAARPVVLVGHSLGGAVA 73


                  ....
gi 149243407  127 FHYA 130
Cdd:pfam12697  74 LAAA 77
PLN03084 PLN03084
alpha/beta hydrolase fold protein; Provisional
 47-141 3.06e-05

alpha/beta hydrolase fold protein; Provisional


Pssm-ID: 178633  Cd Length: 383  Bit Score: 45.26  E-value: 3.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  47 VIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGK--SGNGSYRLLDhyKYLTAWFELLN--LPKKIIFVGHDWG 122
Cdd:PLN03084 130 VLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKpqPGYGFNYTLD--EYVSSLESLIDelKSDKVSLVVQGYF 207

                         90
                 ....*....|....*....
gi 149243407 123 AALAFHYAYEHQDRIKAIV 141
Cdd:PLN03084 208 SPPVVKYASAHPDKIKKLI 226
PRK10349 PRK10349
pimeloyl-ACP methyl ester esterase BioH;
47-163 3.18e-05

pimeloyl-ACP methyl ester esterase BioH;


Pssm-ID: 137836 [Multi-domain]  Cd Length: 256  Bit Score: 44.62  E-value: 3.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  47 VIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSgkSGNGSYRLLDHYKYLtawfeLLNLPKKIIFVGHDWGAALA 126
Cdd:PRK10349  16 LVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRS--RGFGALSLADMAEAV-----LQQAPDKAIWLGWSLGGLVA 88

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 149243407 127 FHYAYEHQDRIKAIVHMESvVDVIESWDEWPDIEEDI 163
Cdd:PRK10349  89 SQIALTHPERVQALVTVAS-SPCFSARDEWPGIKPDV 124
PLN03087 PLN03087
BODYGUARD 1 domain containing hydrolase; Provisional
 43-140 9.65e-05

BODYGUARD 1 domain containing hydrolase; Provisional


Pssm-ID: 215567  Cd Length: 481  Bit Score: 43.64  E-value: 9.65e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  43 AENAVIFLHGNATSSYLWRHVV-PHIEPVA----RCIIPDLIGMGKSGKSGNGSYRLLDHYKYLT-AWFELLNLpKKIIF 116
Cdd:PLN03087 200 AKEDVLFIHGFISSSAFWTETLfPNFSDAAkstyRLFAVDLLGFGRSPKPADSLYTLREHLEMIErSVLERYKV-KSFHI 278

                         90       100
                 ....*....|....*....|....
gi 149243407 117 VGHDWGAALAFHYAYEHQDRIKAI 140
Cdd:PLN03087 279 VAHSLGCILALALAVKHPGAVKSL 302
PRK05855 PRK05855
SDR family oxidoreductase;
46-129 7.28e-04

SDR family oxidoreductase;


Pssm-ID: 235628 [Multi-domain]  Cd Length: 582  Bit Score: 41.12  E-value: 7.28e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  46 AVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGK-SGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAA 124
Cdd:PRK05855  27 TVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSApKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSI 106


                 ....*
gi 149243407 125 LAFHY 129
Cdd:PRK05855 107 QGWEA 111
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
 34-140 2.71e-03

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 39.16  E-value: 2.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  34 INYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKS-GNGSY--------RLLDHykyltaw 104
Cdd:PRK14875 121 VRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAvGAGSLdelaaavlAFLDA------- 193

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 149243407 105 felLNLPKkIIFVGHDWGAALAFHYAYEHQDRIKAI 140
Cdd:PRK14875 194 ---LGIER-AHLVGHSMGGAVALRLAARAPQRVASL 225
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
38-174 3.01e-03

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 38.46  E-value: 3.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  38 DSEKHAenAVIFLHGNATSSYL-WRHVVPHIepVAR---CIIPDLIGMGKS-GKSGNGSYR-LLDHYKYLTA--WFElln 109
Cdd:COG1506   19 DGKKYP--VVVYVHGGPGSRDDsFLPLAQAL--ASRgyaVLAPDYRGYGESaGDWGGDEVDdVLAAIDYLAArpYVD--- 91

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149243407 110 lPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKM 174
Cdd:COG1506   92 -PDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGTTREYTERLMGGPWEDPEAY 155
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
46-156 5.56e-03

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 37.61  E-value: 5.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  46 AVIFLHGNATSSYLWRhvvphiePVAR--------CIIPDLIGMGKSGKSGNGSyRLLDHYKYLTAWFELL-NLPKKIIF 116
Cdd:COG1647   17 GVLLLHGFTGSPAEMR-------PLAEalakagytVYAPRLPGHGTSPEDLLKT-TWEDWLEDVEEAYEILkAGYDKVIV 88

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 149243407 117 VGHDWGAALAFHYAYEHQDrIKAIVHMESVVDvIESWDEW 156
Cdd:COG1647   89 IGLSMGGLLALLLAARYPD-VAGLVLLSPALK-IDDPSAP 126
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
 45-270 7.04e-03

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 37.59  E-value: 7.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407  45 NAVIFLHGNA-----TSSYLWR-----HVVphiepvarcIIPDLIGMGKSGksgnGSYR---LLDHYKYLTAWFELLNLP 111
Cdd:COG1073   38 PAVVVAHGNGgvkeqRALYAQRlaelgFNV---------LAFDYRGYGESE----GEPReegSPERRDARAAVDYLRTLP 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 112 ----KKIIFVGHDWGAALAFHYAYEHQdRIKAIVhMESVVDVIeswdewpdieEDIALIKSEEGEKMVLENNFFVETVLP 187
Cdd:COG1073  105 gvdpERIGLLGISLGGGYALNAAATDP-RVKAVI-LDSPFTSL----------EDLAAQRAKEARGAYLPGVPYLPNVRL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149243407 188 SKIMRKLepeefaayLEPFKEKGEVRRPTLswpreipLVKGGKPDVVQIVRNYNAYLRASDdlPKLFIesdpgffsnaIV 267
Cdd:COG1073  173 ASLLNDE--------FDPLAKIEKISRPLL-------FIHGEKDEAVPFYMSEDLYEAAAE--PKELL----------IV 225


                 ...
gi 149243407 268 EGA 270
Cdd:COG1073  226 PGA 228
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH