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Conserved domains on  [gi|1491165911|gb|RLG50122|]
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NADH-quinone oxidoreductase subunit NuoH [Candidatus Korarchaeota archaeon]

Protein Classification

similar to NADH dehydrogenase I subunit H( domain architecture ID 10002943)

protein similar to NADH dehydrogenase I subunit H

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-336 4.27e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440629  Cd Length: 329  Bit Score: 287.80  E-value: 4.27e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911   1 MSLFRWILdllfspWLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIP 80
Cdd:COG1005     1 MSLLLAPL------LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGP--FGLLQPLADGLKLLFKEDIIP 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  81 AETDKLAFVLGPILLFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMA 160
Cdd:COG1005    73 AGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMIS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 161 YEIPLFISALSMAALYGTMDLIEMVESQVGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILY 240
Cdd:COG1005   153 YEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKF 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 241 GLTMGASYVKFYVLCLLFSIMFLGGWKPVPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILP 320
Cdd:COG1005   233 ALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLP 312

                         330
                  ....*....|....*.
gi 1491165911 321 LSIGSVFLSLGLILLG 336
Cdd:COG1005   313 LSLVNLVLTAAVVLLF 328
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-336 4.27e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 287.80  E-value: 4.27e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911   1 MSLFRWILdllfspWLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIP 80
Cdd:COG1005     1 MSLLLAPL------LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGP--FGLLQPLADGLKLLFKEDIIP 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  81 AETDKLAFVLGPILLFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMA 160
Cdd:COG1005    73 AGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMIS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 161 YEIPLFISALSMAALYGTMDLIEMVESQVGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILY 240
Cdd:COG1005   153 YEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKF 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 241 GLTMGASYVKFYVLCLLFSIMFLGGWKPVPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILP 320
Cdd:COG1005   233 ALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLP 312

                         330
                  ....*....|....*.
gi 1491165911 321 LSIGSVFLSLGLILLG 336
Cdd:COG1005   313 LSLVNLVLTAAVVLLF 328
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
15-332 7.02e-90

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 272.07  E-value: 7.02e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  15 WLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPIL 94
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGP--FGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVI 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  95 LFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAA 174
Cdd:PRK06076   88 AFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 175 LYGTMDLIEMVESQvGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVL 254
Cdd:PRK06076  168 LAGSLNLSDIVEAQ-FLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILV 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1491165911 255 CLLFSIMFLGGWKPVPSFLSWDPigPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGL 332
Cdd:PRK06076  247 SALITTLFLGGWLPPFPLGGGIP--GAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
NADHdh pfam00146
NADH dehydrogenase;
25-330 3.76e-84

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 256.63  E-value: 3.76e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGP--FGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:pfam00146  84 VIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEI 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWkWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:pfam00146 164 VEAQAGG-WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1491165911 265 GWKPVPsflswdPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSL 330
Cdd:pfam00146 243 GWLGPF------PLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
 
Name Accession Description Interval E-value
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-336 4.27e-96

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 287.80  E-value: 4.27e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911   1 MSLFRWILdllfspWLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIP 80
Cdd:COG1005     1 MSLLLAPL------LITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGP--FGLLQPLADGLKLLFKEDIIP 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  81 AETDKLAFVLGPILLFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMA 160
Cdd:COG1005    73 AGADKFLFLLAPILAFIPALLAFAVIPFGPGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMIS 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 161 YEIPLFISALSMAALYGTMDLIEMVESQVGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILY 240
Cdd:COG1005   153 YEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKF 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 241 GLTMGASYVKFYVLCLLFSIMFLGGWKPVPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILP 320
Cdd:COG1005   233 ALFFLAEYANMFLVSALATTLFLGGWLGPFPILPLGGLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLP 312

                         330
                  ....*....|....*.
gi 1491165911 321 LSIGSVFLSLGLILLG 336
Cdd:COG1005   313 LSLVNLVLTAAVVLLF 328
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
15-332 7.02e-90

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 272.07  E-value: 7.02e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  15 WLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPIL 94
Cdd:PRK06076   10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGP--FGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVI 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  95 LFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAA 174
Cdd:PRK06076   88 AFIPAFLAWAVIPFGPELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 175 LYGTMDLIEMVESQvGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVL 254
Cdd:PRK06076  168 LAGSLNLSDIVEAQ-FLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILV 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1491165911 255 CLLFSIMFLGGWKPVPSFLSWDPigPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGL 332
Cdd:PRK06076  247 SALITTLFLGGWLPPFPLGGGIP--GAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
NADHdh pfam00146
NADH dehydrogenase;
25-330 3.76e-84

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 256.63  E-value: 3.76e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKqlGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGP--FGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:pfam00146  84 VIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEI 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWkWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:pfam00146 164 VEAQAGG-WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1491165911 265 GWKPVPsflswdPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSL 330
Cdd:pfam00146 243 GWLGPF------PLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ndhA CHL00032
NADH dehydrogenase subunit 1
 15-335 1.72e-45

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 158.58  E-value: 1.72e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  15 WLFVPlIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkqlG--GAIQLVADLLRYLFAEPIIPAETDKLAFVLGP 92
Cdd:CHL00032   28 WILVP-ILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYA----GplGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  93 ILLFGASCFPTVAIPVSSSFyaIRSDISLLVAL--GLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISAL 170
Cdd:CHL00032  103 SIAVISILLSYLVIPFGYHL--VLADLSIGVFLwiAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 171 SMAALYGTMDLIEMVESQVG---WKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGAS 247
Cdd:CHL00032  181 SISLLSNSLSTVDIVEAQSKygfWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 248 YVKFYVLCLLFSIMFLGGWK------PVPSFLSWDPIGPALVLLLKSLILMV-------LGVFMRAVYPRYRIDQALKIG 314
Cdd:CHL00032  261 YLNLLVSSLFVTVLYLGGWNlsipyiFIPELFEINKTGGVFGTTIGIFITLAktylflfISITTRWTLPRLRMDQLLNLG 340

                         330       340
                  ....*....|....*....|...
gi 1491165911 315 WHMILPLSIGSVFL--SLGLILL 335
Cdd:CHL00032  341 WKFLLPISLGNLLLttSFQLLSL 363
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-335 1.07e-32

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 123.48  E-value: 1.07e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  16 LFVPLIFPGLVTVFLVIL--FIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPI 93
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAvaFLTLLERKVLGYMQLRKGPNVV--GPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  94 LLFGASCFPTVAIPVSSSFyaIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMA 173
Cdd:MTH00218   79 LALTLALLLWMPLPLPFSL--INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 174 ALYGTMDLIEMVESQVGWkWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYV 253
Cdd:MTH00218  157 ILTGGFSLEGFNLTQETI-WLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILF 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 254 LCLLFSIMFLGGWKPVPSFLswdpigpalvllLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLI 333
Cdd:MTH00218  236 MNTLSVILFLGTSLTTINLM------------LKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLP 303


                  ..
gi 1491165911 334 LL 335
Cdd:MTH00218  304 LS 305
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 25-334 1.46e-31

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 121.28  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00029   17 FVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPW--GLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00029   95 IVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEI 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQvgwKWGLLLNPL--AAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMF 262
Cdd:MTH00029  175 VISQ---RSVWLIIPLfpAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFF 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 263 LGGW--------KPVPSFLSWDPIGPALVLLLKSLILMVLGVFM---RAVYPRYRIDQALKIGWHMILPLSIGSVFLSLG 331
Cdd:MTH00029  252 LGGWlspldgipTPPEAFSIFEQIASSKSSFWFFTKSSIFILFFiwsRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAG 331


                  ...
gi 1491165911 332 LIL 334
Cdd:MTH00029  332 ILI 334
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
15-330 3.17e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 119.13  E-value: 3.17e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  15 WLFVPLIFPGLVTVFLVILFIIWFERKLAAKVQLRYGPlyvlkqlgGAIQLVADLLRYLFAEPIIPAETDKLaFVLGPIL 94
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP--------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYV 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  95 LFGASCFPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAA 174
Cdd:COG0650    72 ALAAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALAL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 175 LYGTMDLIEMVESQVGWKWGLLL--NPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFY 252
Cdd:COG0650   152 LAGSTSLSDIVAYQAAHGPLLLSpsLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLF 231

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1491165911 253 VLCLLFSIMFLGGWKPVPSFLSWdpigpaLVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWhMILPLSIGSVFLSL 330
Cdd:COG0650   232 VLLSLFVNLFLPWGIALTLLLAL------LLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLW-TAFLLALLALLLAV 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 25-339 1.91e-30

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 117.77  E-value: 1.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00040   14 IVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPY--GLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWS 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSfyAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00040   92 LIPVPTP--TLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSI 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWKWGLLLNPLAAITFlILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00040  170 SNSQNGSWLLFPCLPLFYIWF-ISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLG 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1491165911 265 GWKPVPSFLSWDPIgpalVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGS-VFLSLGLILLGVVP 339
Cdd:MTH00040  249 GGSPFNEIFPINII----IVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLlIFYLLLLSLLNILP 320
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 25-335 3.09e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 116.77  E-value: 3.09e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00195   12 IVPVLLAVAFFTLLERKILGYIQLRKGPNKV--GPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWV 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPaiTLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00195   90 PIPSPFGFSSINLSVLFFLCVSSLSVYS--ILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIM 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQvGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00195  168 VISQ-GFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLG 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1491165911 265 GwkpvpsflswdpiGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLILL 335
Cdd:MTH00195  247 G-------------GGTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 26-332 1.18e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 115.35  E-value: 1.18e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  26 VTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPIL-----LFGASC 100
Cdd:MTH00143   12 LCVLLAVAFFTLLERKGLGYFQIRKGPNKV--GLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLslilaLLLWQL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 101 FPTVAIPVSSSFyairsdiSLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMD 180
Cdd:MTH00143   90 YPSYFSSSYFGW-------GLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 181 LIEMVESQVGWKWGLLLNPLAAITFLILaLMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSI 260
Cdd:MTH00143  163 FIEISESQFSVWLGFLMFPVFLMWFVSC-LAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVV 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1491165911 261 MFLGGWkpVPSFLSWDpigpaLVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGL 332
Cdd:MTH00143  242 LFFGGS--SVLFLLGG-----VVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 21-334 2.92e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 111.74  E-value: 2.92e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  21 IFPGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASC 100
Cdd:MTH00054    8 ILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVV--GVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 101 FPTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMD 180
Cdd:MTH00054   86 IAWGVIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLN 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 181 LIEMVESQVGWKWGLLLNPlAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSI 260
Cdd:MTH00054  166 LTEIVLAQKNIWFIFPLFP-AAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1491165911 261 MFLGGWKPVPSFLSWdpIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLIL 334
Cdd:MTH00054  245 LFLGGWLVISGPTSY--FSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 25-335 1.08e-27

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 109.87  E-value: 1.08e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00010   13 YVMALLAMAFYTLLERKALGYFQLRKGPNKV--GLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWS 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPaiTLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00010   91 LYPHKHPSFFLKFSILLFLCVSSMNVYT--TLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKI 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWKwgLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00010  169 IMSQYSWI--LLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTS 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1491165911 265 gwkPVPSFLSWDPIgpalvLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLILL 335
Cdd:MTH00010  247 ---FIPSIFISDLM-----LILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFL 309
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 25-334 1.78e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 109.82  E-value: 1.78e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00216   16 IVPLLIAVAYLTLAERKVLGYMQARKGPNVV--GVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWG 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00216   94 VIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEI 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00216  174 VLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLG 253

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 265 GWKPVPSFLSwdpiGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLIL 334
Cdd:MTH00216  254 GWLSPIKYFK----GGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 25-334 2.58e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 106.27  E-value: 2.58e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00225   11 LICLLLSVAFYTLLERKVLGYIQLRKGPNKV--GLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWS 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIR-SDISLLVALGLLAFGpaiTLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIE 183
Cdd:MTH00225   89 LYPSMFSIYSFKfGILFFLCISSLNVYT---ILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFD 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 184 MVESQvGWKWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFL 263
Cdd:MTH00225  166 FSYNQ-KYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1491165911 264 GGwkpvpSFLSWDpigpaLVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLIL 334
Cdd:MTH00225  245 GG-----FFVTID-----LFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 25-335 2.61e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 106.01  E-value: 2.61e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLkqLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00193   12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVG--FMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIrsDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00193   90 IYPYLFNLISF--NLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWKWGLLLNPLAaITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00193  168 MNYQKYIWFIFFSFPLF-LIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLG 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1491165911 265 GWKPVPSFLswdpigpalvllLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGLILL 335
Cdd:MTH00193  247 GDLLSLLFY------------LKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 25-339 3.16e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 106.24  E-value: 3.16e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00071   15 IIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPM--GLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWT 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFgpAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00071   93 PLPMPNNLSNLNLGILFILALSSLAV--YSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNF 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQvGWKWGLL-LNPLAAITFlILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFL 263
Cdd:MTH00071  171 NTTQ-EFMWLIIpAWPMAAMWF-ISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFL 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1491165911 264 GgwkpvPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSV--FLSLGLILLGVVP 339
Cdd:MTH00071  249 G-----STYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTifHISLPISTLGIPP 321
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 19-332 9.05e-23

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 96.60  E-value: 9.05e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  19 PLIFpgLVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGA 98
Cdd:MTH00134   12 PLAY--IVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPY--GLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  99 SCfpTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGT 178
Cdd:MTH00134   88 AL--TLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 179 MDLIEMVESQVGwKWGLLLN-PLAAITFlILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLL 257
Cdd:MTH00134  166 FTLQTFNTAQES-IWLLLPAwPLAAMWY-ISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTL 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1491165911 258 FSIMFLGgwkpvPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFLSLGL 332
Cdd:MTH00134  244 SAILFLG-----ASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLAL 313
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 25-323 3.14e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 95.08  E-value: 3.14e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCfpTV 104
Cdd:MTH00104   10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPY--GLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL--TM 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00104   86 WIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 VESQVGWkWGLLLN-PLAAITFlILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFL 263
Cdd:MTH00104  166 ITTQEHL-WLIFPSwPLAMMWF-ISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1491165911 264 GGwkpvpsflSWDPIGPALVLLLKSLILMVLGVF---MRAVYPRYRIDQALKIGWHMILPLSI 323
Cdd:MTH00104  244 GA--------FHNPYMPELYTTNFTIKTLLLTILflwIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 15-328 1.81e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 89.60  E-value: 1.81e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  15 WLFVPLIFpGLVTVFLVILFIIWFERKLAAKVQLRYGPLYVlkQLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPIL 94
Cdd:MTH00058    2 FGLVSGLE-GLLIILLLVAFFILGERKILGYIQLRKGPNKV--GIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  95 LFGASCFPTVAIpvSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAA 174
Cdd:MTH00058   79 LVLLVVFYCFIY--GSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 175 LYGTMDLIEMVESqvGWkWGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVL 254
Cdd:MTH00058  157 CYGSYSLVDFYYS--GW-LSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIF 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1491165911 255 CLLFSIMFLGGwkpvpsflswdpigpaLVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSIGSVFL 328
Cdd:MTH00058  234 SWLGSVLFFGG----------------GFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFV 291
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 21-323 5.25e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 88.80  E-value: 5.25e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  21 IFPGLVTV-FLVILfiiwfERKLAAKVQLRYGPLYVLKQlgGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGAS 99
Cdd:MTH00111   15 IIPILIAVaFLTLL-----ERKILGYMQLRKGPNIVGPF--GLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 100 CfpTVAIPVSSSFYAIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYG-- 177
Cdd:MTH00111   88 L--TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGgy 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 178 TMDLIEMVESQVgwkWGLLLN-PLAAITFlILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCL 256
Cdd:MTH00111  166 TLQTLATTQEPL---WLIFSSwPLAMMWY-ISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1491165911 257 LFSIMFLGgwkpvPSFLSWDPIGPALVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSI 323
Cdd:MTH00111  242 LTTILFLN-----PSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 25-323 2.12e-17

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 81.10  E-value: 2.12e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911  25 LVTVFLVILFIIWFERKLAAKVQLRYGPLYVLkqLGGAIQLVADLLRYLFAEPIIPAETDKLAFVLGPILLFGASCFPTV 104
Cdd:MTH00090    6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVS--FMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWF 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 105 AIPVSSSFyaIRSDISLLVALGLLAFGPAITLIIGWASNNKFSLIGGLREGYITMAYEIPLFISALSMAALYGTMDLIEM 184
Cdd:MTH00090   84 VLPYFFDF--LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1491165911 185 vesqvgwkwGLLLNPLAAITFLILALMSTSRFPFEIVEAESEIVMGPFTEYSGILYGLTMGASYVKFYVLCLLFSIMFLG 264
Cdd:MTH00090  162 ---------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1491165911 265 gwkpvpsflswdpigpalVLLLKSLILMVLGVFMRAVYPRYRIDQALKIGWHMILPLSI 323
Cdd:MTH00090  233 ------------------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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