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Conserved domains on  [gi|1490726208|gb|RLC97232|]
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hypothetical protein DRI40_00870 [Chloroflexi bacterium]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6485 super family cl45470
Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. ...
 6-67 4.68e-08

Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


The actual alignment was detected with superfamily member pfam20095:

Pssm-ID: 437927  Cd Length: 70  Bit Score: 44.63  E-value: 4.68e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490726208  6 EANKAKCTCTYEPCSRKGK-----CCECIAYHRAHGELPGCLFP---PEVERTYDRSAAKFAEIYSRGPK 67
Cdd:pfam20095  1 MNNSEFCTCTDHKCPFNPAnhdkgCTPCIAKNLKLGEIPSCFFKkvePDASEREDYSFEDFARFVLKNKK 70
 
Name Accession Description Interval E-value
DUF6485 pfam20095
Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. ...
 6-67 4.68e-08

Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 437927  Cd Length: 70  Bit Score: 44.63  E-value: 4.68e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490726208  6 EANKAKCTCTYEPCSRKGK-----CCECIAYHRAHGELPGCLFP---PEVERTYDRSAAKFAEIYSRGPK 67
Cdd:pfam20095  1 MNNSEFCTCTDHKCPFNPAnhdkgCTPCIAKNLKLGEIPSCFFKkvePDASEREDYSFEDFARFVLKNKK 70
 
Name Accession Description Interval E-value
DUF6485 pfam20095
Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. ...
 6-67 4.68e-08

Domain of unknown function (DUF6485); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 437927  Cd Length: 70  Bit Score: 44.63  E-value: 4.68e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1490726208  6 EANKAKCTCTYEPCSRKGK-----CCECIAYHRAHGELPGCLFP---PEVERTYDRSAAKFAEIYSRGPK 67
Cdd:pfam20095  1 MNNSEFCTCTDHKCPFNPAnhdkgCTPCIAKNLKLGEIPSCFFKkvePDASEREDYSFEDFARFVLKNKK 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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