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Conserved domains on  [gi|1481142260|gb|AYB42974|]
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O-methyltransferase [Paenibacillus lautus]

Protein Classification

O-methyltransferase( domain architecture ID 11467877)

O-methyltransferase of the class I-like SAM-binding methyltransferase superfamily, such as catechol O-methyltransferases that can use various catechol-like compounds

CATH:  2.20.25.110
EC:  2.1.1.-|2.1.-.-
Gene Ontology:  GO:0008757|GO:0032259|GO:1904047|GO:0008168|GO:0008171
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 48-225 4.08e-65

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


:

Pssm-ID: 443298  Cd Length: 173  Bit Score: 199.26  E-value: 4.08e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  48 PAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQL 127
Cdd:COG4122     2 PEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260 128 EQLAEektEPFDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTDPRVHGIRKFMDMLSADSAIAGT 207
Cdd:COG4122    82 PRLAD---GPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLESV 158

                         170
                  ....*....|....*...
gi 1481142260 208 AIQTvgskgYDGFYIGIV 225
Cdd:COG4122   159 LLPI-----GDGLLLARK 171
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 48-225 4.08e-65

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 199.26  E-value: 4.08e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  48 PAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQL 127
Cdd:COG4122     2 PEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260 128 EQLAEektEPFDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTDPRVHGIRKFMDMLSADSAIAGT 207
Cdd:COG4122    82 PRLAD---GPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLESV 158

                         170
                  ....*....|....*...
gi 1481142260 208 AIQTvgskgYDGFYIGIV 225
Cdd:COG4122   159 LLPI-----GDGLLLARK 171
Methyltransf_3 pfam01596
O-methyltransferase; Members of this family are O-methyltransferases. The family includes ...
 27-204 1.59e-39

O-methyltransferase; Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.


Pssm-ID: 396257 [Multi-domain]  Cd Length: 203  Bit Score: 134.93  E-value: 1.59e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  27 EVLEKVLAANREAGLPEIDVSPAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSN 106
Cdd:pfam01596   8 EYLKELREETAKLPLAPMQVSPDEGQFLGMLVKLTGAKNVLEIGVFTGYSALAMALALPEDGKITAIDIDPEAYEIAKKF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260 107 VALAGLEDRVSIRVGDALVQLEQLAEEKTEP-FDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTD 185
Cdd:pfam01596  88 IQKAGVAHKISFILGPALKVLEQLTQDKPLPeFDFIFIDADKSNYPNYYERLLELLKVGGLMAIDNTLWHGKVTEPDDQE 167

                         170
                  ....*....|....*....
gi 1481142260 186 PRVHGIRKFMDMLSADSAI 204
Cdd:pfam01596 168 AKTQRLQEFNKDLAQDPRV 186
PLN02476 PLN02476
O-methyltransferase
 7-205 5.87e-29

O-methyltransferase


Pssm-ID: 178094  Cd Length: 278  Bit Score: 109.76  E-value: 5.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260   7 DAATWGKVDDYVTEHLIP-----YDEVLE-----KVLAANRE--AGLP--EIDVSPAQGKLLNVIVQIKGAKRILEIGTL 72
Cdd:PLN02476   49 DPVVVANDDKYGNKQVISltprlYDYVLSnvrepKILRQLREetSKMRgsQMQVSPDQAQLLAMLVQILGAERCIEVGVY 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  73 GGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVG---DALVQLEQLAEEKTepFDLIFIDADKPN 149
Cdd:PLN02476  129 TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGlaaESLKSMIQNGEGSS--YDFAFVDADKRM 206

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1481142260 150 NPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTDPRVHGIRKFMDMLSADSAIA 205
Cdd:PLN02476  207 YQDYFELLLQLVRVGGVIVMDNVLWHGRVADPLVNDAKTISIRNFNKKLMDDKRVS 262
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 65-145 1.19e-06

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 45.88  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  65 RILEIGTLGGYSTIWMARAIGAegRLISLELDPHHAKVAKSNVAlAGLEDRVSIRVGDAlvqlEQLAEEKTEPFDLIFID 144
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGA--RVTGVDISPVALELARKAAA-ALLADNVEVLKGDA----EELPPEADESFDVIISD 73


                  .
gi 1481142260 145 A 145
Cdd:cd02440    74 P 74
methyltr_grsp TIGR04188
methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are ...
 65-111 2.77e-03

methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are predicted SAM-dependent methyltransferases that regularly occur in the context of a putative peptide modification ATP-grasp enzyme (TIGR04187, related to enzymes of microviridin maturation) and a putative ribosomal peptide modification target (TIGR04186).


Pssm-ID: 275041  Cd Length: 363  Bit Score: 38.11  E-value: 2.77e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1481142260  65 RILEIGTLGGYSTIWMARAIGAEgRLISLELDPHHAKVAKSNVALAG 111
Cdd:TIGR04188 110 RVLEIGTGTGYSAALLCHRLGDD-NVTSVEVDPGLAARAASALAAAG 155
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 48-225 4.08e-65

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 199.26  E-value: 4.08e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  48 PAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQL 127
Cdd:COG4122     2 PEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260 128 EQLAEektEPFDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTDPRVHGIRKFMDMLSADSAIAGT 207
Cdd:COG4122    82 PRLAD---GPFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLESV 158

                         170
                  ....*....|....*...
gi 1481142260 208 AIQTvgskgYDGFYIGIV 225
Cdd:COG4122   159 LLPI-----GDGLLLARK 171
Methyltransf_3 pfam01596
O-methyltransferase; Members of this family are O-methyltransferases. The family includes ...
 27-204 1.59e-39

O-methyltransferase; Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.


Pssm-ID: 396257 [Multi-domain]  Cd Length: 203  Bit Score: 134.93  E-value: 1.59e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  27 EVLEKVLAANREAGLPEIDVSPAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSN 106
Cdd:pfam01596   8 EYLKELREETAKLPLAPMQVSPDEGQFLGMLVKLTGAKNVLEIGVFTGYSALAMALALPEDGKITAIDIDPEAYEIAKKF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260 107 VALAGLEDRVSIRVGDALVQLEQLAEEKTEP-FDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTD 185
Cdd:pfam01596  88 IQKAGVAHKISFILGPALKVLEQLTQDKPLPeFDFIFIDADKSNYPNYYERLLELLKVGGLMAIDNTLWHGKVTEPDDQE 167

                         170
                  ....*....|....*....
gi 1481142260 186 PRVHGIRKFMDMLSADSAI 204
Cdd:pfam01596 168 AKTQRLQEFNKDLAQDPRV 186
PLN02476 PLN02476
O-methyltransferase
 7-205 5.87e-29

O-methyltransferase


Pssm-ID: 178094  Cd Length: 278  Bit Score: 109.76  E-value: 5.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260   7 DAATWGKVDDYVTEHLIP-----YDEVLE-----KVLAANRE--AGLP--EIDVSPAQGKLLNVIVQIKGAKRILEIGTL 72
Cdd:PLN02476   49 DPVVVANDDKYGNKQVISltprlYDYVLSnvrepKILRQLREetSKMRgsQMQVSPDQAQLLAMLVQILGAERCIEVGVY 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  73 GGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVG---DALVQLEQLAEEKTepFDLIFIDADKPN 149
Cdd:PLN02476  129 TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGlaaESLKSMIQNGEGSS--YDFAFVDADKRM 206

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1481142260 150 NPNYLKWALQFSKAGTVIISDNVIRNGEVIDYHSTDPRVHGIRKFMDMLSADSAIA 205
Cdd:PLN02476  207 YQDYFELLLQLVRVGGVIVMDNVLWHGRVADPLVNDAKTISIRNFNKKLMDDKRVS 262
PLN02589 PLN02589
caffeoyl-CoA O-methyltransferase
 47-179 2.65e-20

caffeoyl-CoA O-methyltransferase


Pssm-ID: 166230  Cd Length: 247  Bit Score: 85.82  E-value: 2.65e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  47 SPAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQ 126
Cdd:PLN02589   64 SADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPV 143

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1481142260 127 LEQLAEEKTE--PFDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVI 179
Cdd:PLN02589  144 LDQMIEDGKYhgTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVV 198
PLN02781 PLN02781
Probable caffeoyl-CoA O-methyltransferase
 17-179 3.19e-19

Probable caffeoyl-CoA O-methyltransferase


Pssm-ID: 215417  Cd Length: 234  Bit Score: 82.94  E-value: 3.19e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  17 YVTEHlipydEVLEKVLAAN--REAGLPEIDVSPAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLE 94
Cdd:PLN02781   26 YPREH-----ELLKELREATvqKYGNLSEMEVPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTALALPEDGRITAID 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  95 LDPHHAKVAKSNVALAGLEDRVSIRVGDALVQLEQ-LAEEKTEPFDLIFIDADKPNNPNYLKWALQFSKAGTVIISDNVI 173
Cdd:PLN02781  101 IDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQlLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNTL 180


                  ....*.
gi 1481142260 174 RNGEVI 179
Cdd:PLN02781  181 WFGFVA 186
Gcd14 COG2519
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ...
 60-148 5.24e-17

tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442009 [Multi-domain]  Cd Length: 249  Bit Score: 77.12  E-value: 5.24e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  60 IKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDalvqLEQLAEEKTepFD 139
Cdd:COG2519    89 IFPGARVLEAGTGSGALTLALARAVGPEGKVYSYERREDFAEIARKNLERFGLPDNVELKLGD----IREGIDEGD--VD 162


                  ....*....
gi 1481142260 140 LIFIDADKP 148
Cdd:COG2519   163 AVFLDMPDP 171
Methyltransf_24 pfam13578
Methyltransferase domain; This family appears to be a methyltransferase domain.
 67-172 7.74e-17

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 433324 [Multi-domain]  Cd Length: 106  Bit Score: 73.11  E-value: 7.74e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  67 LEIGTLGGYSTIWMARAI--GAEGRLISLELDPHHAKVAKsNVALAGLEDRVSIRVGDALVQLEQLAEektEPFDLIFID 144
Cdd:pfam13578   1 VEIGTYSGVSTLWLAAALrdNGLGRLTAVDPDPGAEEAGA-LLRKAGLDDRVRLIVGDSREALPSLAD---GPIDLLFID 76

                          90       100       110
                  ....*....|....*....|....*....|
gi 1481142260 145 ADKPNNP--NYLKWALQFSKAGTVIISDNV 172
Cdd:pfam13578  77 GDHTYEAvlNDLELWLPRLAPGGVILFHDI 106
PCMT pfam01135
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
58-168 1.65e-10

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);


Pssm-ID: 395902 [Multi-domain]  Cd Length: 205  Bit Score: 58.53  E-value: 1.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  58 VQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLeDRVSIRVGDALVQLEQLAeekteP 137
Cdd:pfam01135  69 LELKPGMRVLEIGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLEKLGL-ENVIVVVGDGRQGWPEFA-----P 142

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1481142260 138 FDLIFIDADKPNNPNylKWALQFSKAGTVII 168
Cdd:pfam01135 143 YDAIHVGAAAPEIPE--ALIDQLKEGGRLVI 171
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 42-164 2.66e-10

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 56.86  E-value: 2.66e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  42 PEIDVSPAQGKLLNVIV---QIKGAKRILEIGTLGGYSTIWMARAIGAegRLISLELDPHHAKVAKSNVALAGLEDRVSI 118
Cdd:COG2230    28 PDDTLEEAQEAKLDLILrklGLKPGMRVLDIGCGWGGLALYLARRYGV--RVTGVTLSPEQLEYARERAAEAGLADRVEV 105

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1481142260 119 RVGDAlvqlEQLAEEktEPFDLIF-IDA----DKPNNPNYLKWALQFSKAG 164
Cdd:COG2230   106 RLADY----RDLPAD--GQFDAIVsIGMfehvGPENYPAYFAKVARLLKPG 150
RsmD COG0742
16S rRNA G966 N2-methylase RsmD [Translation, ribosomal structure and biogenesis]; 16S rRNA ...
 85-144 3.22e-09

16S rRNA G966 N2-methylase RsmD [Translation, ribosomal structure and biogenesis]; 16S rRNA G966 N2-methylase RsmD is part of the Pathway/BioSystem: 16S rRNA modification


Pssm-ID: 440505 [Multi-domain]  Cd Length: 183  Bit Score: 54.32  E-value: 3.22e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  85 GAEgRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQLEQLAeekTEPFDLIFID 144
Cdd:COG0742    63 GAA-SVVFVEKDRKAAAVIRKNLEKLGLEDRARVIRGDALRFLKRLA---GEPFDLVFLD 118
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 59-145 1.42e-07

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 50.09  E-value: 1.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  59 QIKGAKRILEIGTLGGYSTiwmarAIGAE--GRLISLELDPHHAKVAKSNVALAGLeDRVSIRVGDALVQLEQLAeekte 136
Cdd:COG2518    63 DLKPGDRVLEIGTGSGYQA-----AVLARlaGRVYSVERDPELAERARERLAALGY-DNVTVRVGDGALGWPEHA----- 131


                  ....*....
gi 1481142260 137 PFDLIFIDA 145
Cdd:COG2518   132 PFDRIIVTA 140
TrmN6 COG4123
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ...
 58-142 2.20e-07

tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443299 [Multi-domain]  Cd Length: 238  Bit Score: 49.76  E-value: 2.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  58 VQIKGAKRILEIGT------LggystiwMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDAlvqLEQLA 131
Cdd:COG4123    33 APVKKGGRVLDLGTgtgviaL-------MLAQRSPGARITGVEIQPEAAELARRNVALNGLEDRITVIHGDL---KEFAA 102

                          90
                  ....*....|.
gi 1481142260 132 EEKTEPFDLIF 142
Cdd:COG4123   103 ELPPGSFDLVV 113
PRK13944 PRK13944
protein-L-isoaspartate O-methyltransferase; Provisional
 14-168 4.49e-07

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 140001  Cd Length: 205  Bit Score: 48.66  E-value: 4.49e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  14 VDDYVTEHLIPYDEVLEKVLAANREAG-LPEIDVSPAQGKLLNV-----------------IVQIKGAKRILEIGTLGGY 75
Cdd:PRK13944    6 VEELVREGIIKSERVKKAMLSVPREEFvMPEYRMMAYEDRPLPLfagatisaphmvammceLIEPRPGMKILEVGTGSGY 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  76 STIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQLEQLAeektePFDLIFIDADKPNNPNYLk 155
Cdd:PRK13944   86 QAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHA-----PFDAIIVTAAASTIPSAL- 159

                         170
                  ....*....|...
gi 1481142260 156 wALQFSKAGTVII 168
Cdd:PRK13944  160 -VRQLKDGGVLVI 171
RlmK COG1092
23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure ...
 102-144 8.51e-07

23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure and biogenesis]; 23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI is part of the Pathway/BioSystem: 23S rRNA modification


Pssm-ID: 440709 [Multi-domain]  Cd Length: 392  Bit Score: 48.64  E-value: 8.51e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1481142260 102 VAKSNVALAGLEDRVSIRVGDALVQLEQLAEEKtEPFDLIFID 144
Cdd:COG1092   254 WAKENAALNGLDDRHEFVQADAFDWLRELAREG-ERFDLIILD 295
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 65-145 1.19e-06

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 45.88  E-value: 1.19e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  65 RILEIGTLGGYSTIWMARAIGAegRLISLELDPHHAKVAKSNVAlAGLEDRVSIRVGDAlvqlEQLAEEKTEPFDLIFID 144
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGA--RVTGVDISPVALELARKAAA-ALLADNVEVLKGDA----EELPPEADESFDVIISD 73


                  .
gi 1481142260 145 A 145
Cdd:cd02440    74 P 74
PRK13942 PRK13942
protein-L-isoaspartate O-methyltransferase; Provisional
 65-154 1.73e-06

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 184409  Cd Length: 212  Bit Score: 46.93  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  65 RILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDrVSIRVGDALVQLEQLAeektePFDLIFID 144
Cdd:PRK13942   79 KVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDN-VEVIVGDGTLGYEENA-----PYDRIYVT 152

                          90
                  ....*....|
gi 1481142260 145 ADKPNNPNYL 154
Cdd:PRK13942  153 AAGPDIPKPL 162
PRK13943 PRK13943
protein-L-isoaspartate O-methyltransferase; Provisional
 57-172 2.73e-06

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 237568 [Multi-domain]  Cd Length: 322  Bit Score: 47.15  E-value: 2.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  57 IVQIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIrVGDALVQLEQLAeekte 136
Cdd:PRK13943   75 WVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGDGYYGVPEFA----- 148

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1481142260 137 PFDLIFIDADKPNNPNYlkWALQFSKAGTVIISDNV 172
Cdd:PRK13943  149 PYDVIFVTVGVDEVPET--WFTQLKEGGRVIVPINL 182
PLN02244 PLN02244
tocopherol O-methyltransferase
 61-126 2.90e-06

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 47.05  E-value: 2.90e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1481142260  61 KGAKRILEIGTLGGYSTIWMARAIGAEGRLISLEldPHHAKVAKSNVALAGLEDRVSIRVGDALVQ 126
Cdd:PLN02244  117 KRPKRIVDVGCGIGGSSRYLARKYGANVKGITLS--PVQAARANALAAAQGLSDKVSFQVADALNQ 180
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 60-180 1.19e-05

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 43.94  E-value: 1.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  60 IKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLeDRVSIRVGDALVQLEQLAEEKtepFD 139
Cdd:pfam13847   1 IDKGMRVLDLGCGTGHLSFELAEELGPNAEVVGIDISEEAIEKARENAQKLGF-DNVEFEQGDIEELPELLEDDK---FD 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1481142260 140 LIFIDA---DKPNNPNYLKWALQFSKAGTVIISDNVIRNGEVID 180
Cdd:pfam13847  77 VVISNCvlnHIPDPDKVLQEILRVLKPGGRLIISDPDSLAELPA 120
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 46-142 1.49e-05

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 44.14  E-value: 1.49e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  46 VSPAQGKLLNVIVQIKGAKRILEIGTLGGYSTIWMARAIGaeGRLISLELDPHHAKVAKSNVALAGLeDRVSIRVGDalv 125
Cdd:COG0500    10 LLPGLAALLALLERLPKGGRVLDLGCGTGRNLLALAARFG--GRVIGIDLSPEAIALARARAAKAGL-GNVEFLVAD--- 83

                          90
                  ....*....|....*..
gi 1481142260 126 qLEQLAEEKTEPFDLIF 142
Cdd:COG0500    84 -LAELDPLPAESFDLVV 99
RsmB COG0144
16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and ...
 80-145 2.18e-05

16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family is part of the Pathway/BioSystem: 16S rRNA modification


Pssm-ID: 439914 [Multi-domain]  Cd Length: 441  Bit Score: 44.61  E-value: 2.18e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1481142260  80 MARAIGAEGRLISLELDPHHAKVAKSNVALAGLeDRVSIRVGDALVQLEQLAEektePFDLIFIDA 145
Cdd:COG0144   267 LAELMGNKGRVVAVDISEHRLKRLRENLARLGL-SNVEVVVADARELLEWLPG----KFDRVLLDA 327
Cons_hypoth95 pfam03602
Conserved hypothetical protein 95;
85-144 4.67e-05

Conserved hypothetical protein 95;


Pssm-ID: 427391 [Multi-domain]  Cd Length: 179  Bit Score: 42.61  E-value: 4.67e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  85 GAEgRLISLELDPHHAKVAKSNVALAGLEDRVsiRVGDALVQLEQLAEeKTEPFDLIFID 144
Cdd:pfam03602  63 GAK-RVTLVEKDKRAVQILKENLQLLGLPGAV--LVMDALLALLRLAG-KGPVFDIVFLD 118
SpeE COG0421
Spermidine synthase (polyamine aminopropyltransferase) [Amino acid transport and metabolism];
63-145 6.25e-05

Spermidine synthase (polyamine aminopropyltransferase) [Amino acid transport and metabolism];


Pssm-ID: 440190 [Multi-domain]  Cd Length: 195  Bit Score: 42.51  E-value: 6.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  63 AKRILEIGtLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAG--LED-RVSIRVGDALVQLEQLAEEktepFD 139
Cdd:COG0421    38 PKRVLIIG-GGDGGLARELLKHPPVERVDVVEIDPEVVELAREYFPLLApaFDDpRLRVVIGDGRAFLREAEES----YD 112


                  ....*.
gi 1481142260 140 LIFIDA 145
Cdd:COG0421   113 VIIVDL 118
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 64-142 9.02e-05

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 40.77  E-value: 9.02e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1481142260  64 KRILEIGTLGGYSTIWMARAiGAegRLISLELDPHHAKVAKSNVAlaglEDRVSIRVGDalvqLEQLAEEKtEPFDLIF 142
Cdd:COG2227    26 GRVLDVGCGTGRLALALARR-GA--DVTGVDISPEALEIARERAA----ELNVDFVQGD----LEDLPLED-GSFDLVI 92
cbiT PRK00377
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
 60-173 1.16e-04

cobalt-precorrin-6Y C(15)-methyltransferase; Provisional


Pssm-ID: 234740  Cd Length: 198  Bit Score: 41.71  E-value: 1.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  60 IKGAKrILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQLEQLAEEktepFD 139
Cdd:PRK00377   39 RKGDM-ILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK----FD 113

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1481142260 140 LIFIDADKPNNPNYLKWALQFSKAGTVIISDNVI 173
Cdd:PRK00377  114 RIFIGGGSEKLKEIISASWEIIKKGGRIVIDAIL 147
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 58-143 1.18e-04

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 40.75  E-value: 1.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  58 VQIKGAKRILEIGTLGGYSTIWMARaigAEGRLISLELDPHHAKVAKSNVALAGLedRVSIRVGDAlvqlEQLAEEkTEP 137
Cdd:COG2226    18 LGLRPGARVLDLGCGTGRLALALAE---RGARVTGVDISPEMLELARERAAEAGL--NVEFVVGDA----EDLPFP-DGS 87


                  ....*.
gi 1481142260 138 FDLIFI 143
Cdd:COG2226    88 FDLVIS 93
Trm5 COG2520
tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]; tRNA G37 ...
 74-168 1.76e-04

tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]; tRNA G37 N-methylase Trm5 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442010 [Multi-domain]  Cd Length: 333  Bit Score: 41.77  E-value: 1.76e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  74 GYSTIWMARAIGAegRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDAlvqlEQLAEEKTEPFDLIFIdadkpNNP-- 151
Cdd:COG2520   192 GPFSIPIAKRSGA--KVVAIDINPDAVEYLKENIRLNKVEDRVTPILGDA----REVAPELEGKADRIIM-----NLPhs 260

                          90
                  ....*....|....*....
gi 1481142260 152 --NYLKWALQFSKAGTVII 168
Cdd:COG2520   261 adEFLDAALRALKPGGVIH 279
PRK14968 PRK14968
putative methyltransferase; Provisional
 53-154 3.47e-04

putative methyltransferase; Provisional


Pssm-ID: 237872 [Multi-domain]  Cd Length: 188  Bit Score: 40.27  E-value: 3.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  53 LLNVIVQIKGaKRILEIGTLGGYSTIWMARaigAEGRLISLELDPHHAKVAKSNVALAGLEDR-VSIRVGDAlvqLEQLA 131
Cdd:PRK14968   15 LAENAVDKKG-DRVLEVGTGSGIVAIVAAK---NGKKVVGVDINPYAVECAKCNAKLNNIRNNgVEVIRSDL---FEPFR 87

                          90       100
                  ....*....|....*....|....
gi 1481142260 132 EEKtepFDLI-FidadkpnNPNYL 154
Cdd:PRK14968   88 GDK---FDVIlF-------NPPYL 101
pcm PRK00312
protein-L-isoaspartate(D-aspartate) O-methyltransferase;
59-154 4.83e-04

protein-L-isoaspartate(D-aspartate) O-methyltransferase;


Pssm-ID: 178974 [Multi-domain]  Cd Length: 212  Bit Score: 39.80  E-value: 4.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  59 QIKGAKRILEIGTLGGYSTIWMARAIgaeGRLISLELDPHHAKVAKSNVALAGLEDrVSIRVGDALVQLEQLAeektePF 138
Cdd:PRK00312   75 ELKPGDRVLEIGTGSGYQAAVLAHLV---RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHGDGWKGWPAYA-----PF 145

                          90
                  ....*....|....*.
gi 1481142260 139 DLIFIDADKPNNPNYL 154
Cdd:PRK00312  146 DRILVTAAAPEIPRAL 161
COG4262 COG4262
Predicted spermidine synthase with an N-terminal membrane domain [General function prediction ...
 94-151 5.68e-04

Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only];


Pssm-ID: 443404 [Multi-domain]  Cd Length: 426  Bit Score: 40.23  E-value: 5.68e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1481142260  94 ELDPHHAKVAKSNVALAGL------EDRVSIRVGDALvqleQLAEEKTEPFDLIFIDADKPNNP 151
Cdd:COG4262   317 DLDPEVTDLAKTNPFLRELnggalnDPRVTVVNADAF----QFLRETDEKYDVIIVDLPDPSNF 376
PRK03612 PRK03612
polyamine aminopropyltransferase;
94-151 9.92e-04

polyamine aminopropyltransferase;


Pssm-ID: 235139 [Multi-domain]  Cd Length: 521  Bit Score: 39.82  E-value: 9.92e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1481142260  94 ELDPHHAKVAKSNVALAGL-----ED-RVSIRVGDALVQLEQLAEektePFDLIFIDADKPNNP 151
Cdd:PRK03612  328 DLDPAMTELARTSPALRALnggalDDpRVTVVNDDAFNWLRKLAE----KFDVIIVDLPDPSNP 387
Methyltransf_15 pfam09445
RNA cap guanine-N2 methyltransferase; RNA cap guanine-N2 methyltransferases such as ...
 63-142 2.27e-03

RNA cap guanine-N2 methyltransferase; RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe Tgs1 and Giardia lamblia Tgs2 catalyze methylation of the exocyclic N2 amine of 7-methylguanosine.


Pssm-ID: 370496  Cd Length: 165  Bit Score: 37.31  E-value: 2.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481142260  63 AKRILEIGTLGGYSTIWMARAIGaegRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDALVQLEQLAEEKTEpFDLIF 142
Cdd:pfam09445   1 ATRILDVFCGGGGNTIQFANVFD---SVISIDINLEHLACAQHNAEVYGVSDRIWLIHGDWFELLAKLKFEKIK-YDCVF 76
methyltr_grsp TIGR04188
methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are ...
 65-111 2.77e-03

methyltransferase, ATP-grasp peptide maturase system; Members of this protein family are predicted SAM-dependent methyltransferases that regularly occur in the context of a putative peptide modification ATP-grasp enzyme (TIGR04187, related to enzymes of microviridin maturation) and a putative ribosomal peptide modification target (TIGR04186).


Pssm-ID: 275041  Cd Length: 363  Bit Score: 38.11  E-value: 2.77e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1481142260  65 RILEIGTLGGYSTIWMARAIGAEgRLISLELDPHHAKVAKSNVALAG 111
Cdd:TIGR04188 110 RVLEIGTGTGYSAALLCHRLGDD-NVTSVEVDPGLAARAASALAAAG 155
COG4076 COG4076
Predicted RNA methylase [General function prediction only];
64-141 4.02e-03

Predicted RNA methylase [General function prediction only];


Pssm-ID: 443253 [Multi-domain]  Cd Length: 230  Bit Score: 37.32  E-value: 4.02e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1481142260  64 KRILEIGTLGGYSTIWMARAiGAEgRLISLELDPHHAKVAKSNVALAGLEDRVSIRVGDAL-VQLEqlaeektEPFDLI 141
Cdd:COG4076    37 DVVLDIGTGSGLLSMLAARA-GAK-KVYAVEVNPDIAAVARRIIAANGLSDRITVINADATdLDLP-------EKADVI 106
PRK08317 PRK08317
hypothetical protein; Provisional
 59-123 5.44e-03

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 36.84  E-value: 5.44e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1481142260  59 QIKGAKRILEIGTLGGYSTIWMARAIGAEGRLISLELDPHHAKVAKSnvALAGLEDRVSIRVGDA 123
Cdd:PRK08317   16 AVQPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAKE--RAAGLGPNVEFVRGDA 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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