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Conserved domains on  [gi|1464446992|gb|AXQ56607|]
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geranylgeranyl reductase family protein [Streptomyces koyangensis]

Protein Classification

geranylgeranyl reductase family protein( domain architecture ID 11493467)

geranylgeranyl reductase family protein may be involved in chlorophyll and bacteriochlorophyll biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 5.91e-103

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


:

Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 307.71  E-value: 5.91e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwlRNKGLRIIGGGHRLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  91 LDWPdlasfPDYGLVRKRDDFDEQLARQAQKAGARLH-ERCNVGAPITDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELRlGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 170 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDKRGPGPdrllPGYGWVFGMGDGTSNVGLGVLNTs 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSRSA- 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 250 asFKELDWREVLKAWTASMPEewgyTEENMTGPIRGAALPMAFNRQPHYTKGLLLVGDAGGLVNPFNGEGIAYAMESGQI 329
Cdd:TIGR02032 217 --EEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1464446992 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 5.91e-103

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 307.71  E-value: 5.91e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwlRNKGLRIIGGGHRLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  91 LDWPdlasfPDYGLVRKRDDFDEQLARQAQKAGARLH-ERCNVGAPITDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELRlGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 170 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDKRGPGPdrllPGYGWVFGMGDGTSNVGLGVLNTs 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSRSA- 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 250 asFKELDWREVLKAWTASMPEewgyTEENMTGPIRGAALPMAFNRQPHYTKGLLLVGDAGGLVNPFNGEGIAYAMESGQI 329
Cdd:TIGR02032 217 --EEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1464446992 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
17-359 5.76e-67

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.83  E-value: 5.76e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  17 AGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDiSEEAGWLRNKGLRIIGGGHrlqldwPDL 96
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGGKS------VEL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  97 ASFPDYGLVRKRDDFDEQLARQAQKAGARLHERCNVGAPITDPrtGRITgVEAKLGEEktpvtFHAPLVVAADGNSTRLS 176
Cdd:COG0644    74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGEE-----IRADYVVDADGARSLLA 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 177 LAMGLHRREDRP--MGVAVRTYFTSPRHDDDYLESWLELWDKRGPGpdrllpGYGWVFGMGDGTSNVGlgvlntsasfke 254
Cdd:COG0644   146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFGEGAPG------GYGWVFPLGDGRVSVG------------ 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 255 ldwrevlkawtasmpeewgyteenmtgpirgaaLPMAFNRQPHYTKGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVI 334
Cdd:COG0644   208 ---------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAI 254

                         330       340
                  ....*....|....*....|....*
gi 1464446992 335 VQAHARSTPaqRERALLGYPKVLKE 359
Cdd:COG0644   255 AEALEGGDF--SAEALAEYERRLRE 277
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 12-383 3.49e-16

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 80.18  E-value: 3.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVAMG-IDISEEAGWLRNKGLRIIGGGHrLQ 90
Cdd:PLN00093   42 VAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKMKMISPSN-VA 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  91 LDWPDLASFPDY-GLVRkRDDFDEQLARQAQKAGAR----LHERCNVGAPITDPRTGRITGVEAKLGEeKTPVTFHAPLV 165
Cdd:PLN00093  114 VDIGKTLKPHEYiGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYVIHYTSYDSGSGA-GTPKTLEVDAV 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 166 VAADGNSTRLSLAMGLHrreDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGPDRllpgYGWVFGMGDGTSnVGLG- 244
Cdd:PLN00093  192 IGADGANSRVAKDIDAG---DYDYAIAFQERIKIPDDKMEYYEDLAEMYVGDDVSPDF----YGWVFPKCDHVA-VGTGt 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 245 VLNTSAsfkeldwrevLKAWTASMPEEwgyTEENMTGP--IRGAALPMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIA 321
Cdd:PLN00093  264 VVNKPA----------IKKYQRATRNR---AKDKIAGGkiIRVEAHPIPEHPRPRRVRGrVALVGDAAGYVTKCSGEGIY 330

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1464446992 322 YAMESGQIAADVIVQAHARSTPAQRERALLGYPKVLKETYGGYYSL-------------GR-AFVKLIGNPKVMKL 383
Cdd:PLN00093  331 FAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKVldilqkvfyrsnpAReAFVEMCADEYVQKM 406
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 10-324 1.18e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.51  E-value: 1.18e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  10 ADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVAMGID--ISEEAGWLRNKGLRII 83
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEdrILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  84 GGGHRLQLDWPDLASFP-DYGlvrkRDDFDEQLARQAQKAGARLHERCNVGAPITDPrtgriTGVEAKL--GEEKTPVTF 160
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVtVYP----QTELEPILVEHAEARGAQVRFGTEVLSLEQDG-----DGVTAVVrdRRDGEEYTV 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 161 HAPLVVAADG-NST-RLSLAMGLHRREDRPMGVaVRTYFTSPRHDDDYLESWLELW----DKRG----PGPDRLLPGYGW 230
Cdd:pfam01494 149 RAKYLVGCDGgRSPvRKTLGIEFEGFEGVPFGS-LDVLFDAPDLSDPVERAFVHYLiyapHSRGfmvgPWRSAGRERYYV 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 231 VFGMGDGTSNVGlgvlntsasfKELDWREVLKAWTASMPEEWGYTEenmtgPIRGAALPMAFNRQPHYTKG-LLLVGDAG 309
Cdd:pfam01494 228 QVPWDEEVEERP----------EEFTDEELKQRLRSIVGIDLALVE-----ILWKSIWGVASRVATRYRKGrVFLAGDAA 292

                         330
                  ....*....|....*
gi 1464446992 310 GLVNPFNGEGIAYAM 324
Cdd:pfam01494 293 HIHPPTGGQGLNTAI 307
 
Name Accession Description Interval E-value
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 11-334 5.91e-103

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 307.71  E-value: 5.91e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISEEagwlRNKGLRIIGGGHRLQ 90
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPGELIVNL----VRGARFFSPNGDSVE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  91 LDWPdlasfPDYGLVRKRDDFDEQLARQAQKAGARLH-ERCNVGAPITDPRTGRITgveakLGEEKtpvTFHAPLVVAAD 169
Cdd:TIGR02032  78 IPIE-----TELAYVIDRDAFDEQLAERAQEAGAELRlGTRVLDVEIHDDRVVVIV-----RGSEG---TVTAKIVIGAD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 170 GNSTRLSLAMGlHRREDRPMGVAVRTYFTSPrhDDDYLESWLELWDKRGPGPdrllPGYGWVFGMGDGTSNVGLGVLNTs 249
Cdd:TIGR02032 145 GSRSIVAKKLG-LKKEPREYGVAARAEVEMP--DEEVDEDFVEVYIDRGIVP----GGYGWVFPKGDGTANVGVGSRSA- 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 250 asFKELDWREVLKAWTASMPEewgyTEENMTGPIRGAALPMAFNRQPHYTKGLLLVGDAGGLVNPFNGEGIAYAMESGQI 329
Cdd:TIGR02032 217 --EEGEDPKKYLKDFLARRPE----LKDAETVEVCGALIPIGRPDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDI 290


                  ....*
gi 1464446992 330 AADVI 334
Cdd:TIGR02032 291 AAEVV 295
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
17-359 5.76e-67

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 214.83  E-value: 5.76e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  17 AGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDiSEEAGWLRNKGLRIIGGGHrlqldwPDL 96
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLD-EPLERPVRGARFYSPGGKS------VEL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  97 ASFPDYGLVRKRDDFDEQLARQAQKAGARLHERCNVGAPITDPrtGRITgVEAKLGEEktpvtFHAPLVVAADGNSTRLS 176
Cdd:COG0644    74 PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDD--GRVV-VRTGDGEE-----IRADYVVDADGARSLLA 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 177 LAMGLHRREDRP--MGVAVRTYFTSPRHDDDYLESWLELWDKRGPGpdrllpGYGWVFGMGDGTSNVGlgvlntsasfke 254
Cdd:COG0644   146 RKLGLKRRSDEPqdYALAIKEHWELPPLEGVDPGAVEFFFGEGAPG------GYGWVFPLGDGRVSVG------------ 207

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 255 ldwrevlkawtasmpeewgyteenmtgpirgaaLPMAFNRQPHYTKGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVI 334
Cdd:COG0644   208 ---------------------------------IPLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAI 254

                         330       340
                  ....*....|....*....|....*
gi 1464446992 335 VQAHARSTPaqRERALLGYPKVLKE 359
Cdd:COG0644   255 AEALEGGDF--SAEALAEYERRLRE 277
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 8-353 2.88e-20

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 91.15  E-value: 2.88e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGI--DISEEAGWLRNKGLRIIGG 85
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLwdRLLARGAPIRGIRVRDGSD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  86 GHRL-QLDWPDLASFPDYGLvrKRDDFDEQLARQAQKAGARLHERCNVGAPITDPrtgriTGVEAKLGEEKtpvTFHAPL 164
Cdd:COG0654    82 GRVLaRFDAAETGLPAGLVV--PRADLERALLEAARALGVELRFGTEVTGLEQDA-----DGVTVTLADGR---TLRADL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 165 VVAADG-NSTrlslamglhrredrpmgvaVRTYFTSPRHDDDYLESWLelwdkrgpgpdrllpgygwVFGMgdgtsnvgl 243
Cdd:COG0654   152 VVGADGaRSA-------------------VRRLLGIGFTGRDYPQRAL-------------------WAGV--------- 184

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 244 gvlntsasfkELDWREVLKAWTASMPEewgyteenMTGPIRGAALPMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIAY 322
Cdd:COG0654   185 ----------RTELRARLAAAGPRLGE--------LLELSPRSAFPLRRRRAERWRRGrVVLLGDAAHTMHPLGGQGANL 246

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1464446992 323 AMESGQIAADVIVQAHARSTPaqrERALLGY 353
Cdd:COG0654   247 ALRDAAALAWKLAAALRGRDD---EAALARY 274
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 12-383 3.49e-16

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 80.18  E-value: 3.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEKTaFPREKVCGdGLTPratkqLVAMG-IDISEEAGWLRNKGLRIIGGGHrLQ 90
Cdd:PLN00093   42 VAVIGGGPAGACAAETLAKGGIETFLIERK-LDNAKPCG-GAIP-----LCMVGeFDLPLDIIDRKVTKMKMISPSN-VA 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  91 LDWPDLASFPDY-GLVRkRDDFDEQLARQAQKAGAR----LHERCNVGAPITDPRTGRITGVEAKLGEeKTPVTFHAPLV 165
Cdd:PLN00093  114 VDIGKTLKPHEYiGMVR-REVLDSFLRERAQSNGATlingLFTRIDVPKDPNGPYVIHYTSYDSGSGA-GTPKTLEVDAV 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 166 VAADGNSTRLSLAMGLHrreDRPMGVAVRTYFTSPRHDDDYLESWLELWDKRGPGPDRllpgYGWVFGMGDGTSnVGLG- 244
Cdd:PLN00093  192 IGADGANSRVAKDIDAG---DYDYAIAFQERIKIPDDKMEYYEDLAEMYVGDDVSPDF----YGWVFPKCDHVA-VGTGt 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 245 VLNTSAsfkeldwrevLKAWTASMPEEwgyTEENMTGP--IRGAALPMAFNRQPHYTKG-LLLVGDAGGLVNPFNGEGIA 321
Cdd:PLN00093  264 VVNKPA----------IKKYQRATRNR---AKDKIAGGkiIRVEAHPIPEHPRPRRVRGrVALVGDAAGYVTKCSGEGIY 330

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1464446992 322 YAMESGQIAADVIVQAHARSTPAQRERALLGYPKVLKETYGGYYSL-------------GR-AFVKLIGNPKVMKL 383
Cdd:PLN00093  331 FAAKSGRMCAEAIVEGSENGTRMVDEADLREYLRKWDKKYWPTYKVldilqkvfyrsnpAReAFVEMCADEYVQKM 406
PRK06185 PRK06185
FAD-dependent oxidoreductase;
4-205 3.99e-14

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 73.74  E-value: 3.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   4 PRTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA-FPREkVCGDGLTPRATKQLVAMG-IDISEEAGWLRNKGLR 81
Cdd:PRK06185    1 MAEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKHAdFLRD-FRGDTVHPSTLELMDELGlLERFLELPHQKVRTLR 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  82 IIGGGHRLQLdwPDLASFP---DYGLVRKRDDFDEQLARQAQK-AGARLHERCNVGAPITDPrtGRITGVEAKLGEEktP 157
Cdd:PRK06185   80 FEIGGRTVTL--ADFSRLPtpyPYIAMMPQWDFLDFLAEEASAyPNFTLRMGAEVTGLIEEG--GRVTGVRARTPDG--P 153

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1464446992 158 VTFHAPLVVAADGNSTRLSLAMGLH-RREDRPMGVavrTYFTSPRHDDD 205
Cdd:PRK06185  154 GEIRADLVVGADGRHSRVRALAGLEvREFGAPMDV---LWFRLPREPDD 199
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
8-335 1.54e-13

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 71.47  E-value: 1.54e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREK------VCGDGLTPRATKQLVAM---------------GI 66
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGAsgrnagQLRPGLAALADRALVRLarealdlwrelaaelGI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  67 DIS-EEAGWLR--------------NKGLRIIGGGHRLqLD-------WPDLASFPDYGLVRKRDDFD-------EQLAR 117
Cdd:COG0665    81 DCDfRRTGVLYlarteaelaalraeAEALRALGLPVEL-LDaaelrerEPGLGSPDYAGGLYDPDDGHvdpaklvRALAR 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 118 QAQKAGARLHERCNVGApiTDPRTGRITGVEAKLGeektpvTFHAP-LVVAADGNSTRLSLAMGLhrredRPMGVAVRTY 196
Cdd:COG0665   160 AARAAGVRIREGTPVTG--LEREGGRVTGVRTERG------TVRADaVVLAAGAWSARLLPMLGL-----RLPLRPVRGY 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 197 FTSPRHDDDYLESWLeLWDKRG---PGPD-RLLPGYGWVFGMGDGTSNVGLGVLN---TSASFKELDWREVLKAWTASMP 269
Cdd:COG0665   227 VLVTEPLPDLPLRPV-LDDTGVylrPTADgRLLVGGTAEPAGFDRAPTPERLEALlrrLRRLFPALADAEIVRAWAGLRP 305

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1464446992 270 eewgYTEENMtgPIRGAAlpmafnrqPHYtKGLLLvgdAGGlvnpFNGEGIAYAMESGQIAADVIV 335
Cdd:COG0665   306 ----MTPDGL--PIIGRL--------PGA-PGLYV---ATG----HGGHGVTLAPAAGRLLADLIL 349
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 10-324 1.18e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.51  E-value: 1.18e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  10 ADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA----FPRekvcGDGLTPRATKQLVAMGID--ISEEAGWLRNKGLRII 83
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHAttsvLPR----AHGLNQRTMELLRQAGLEdrILAEGVPHEGMGLAFY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  84 GGGHRLQLDWPDLASFP-DYGlvrkRDDFDEQLARQAQKAGARLHERCNVGAPITDPrtgriTGVEAKL--GEEKTPVTF 160
Cdd:pfam01494  78 NTRRRADLDFLTSPPRVtVYP----QTELEPILVEHAEARGAQVRFGTEVLSLEQDG-----DGVTAVVrdRRDGEEYTV 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 161 HAPLVVAADG-NST-RLSLAMGLHRREDRPMGVaVRTYFTSPRHDDDYLESWLELW----DKRG----PGPDRLLPGYGW 230
Cdd:pfam01494 149 RAKYLVGCDGgRSPvRKTLGIEFEGFEGVPFGS-LDVLFDAPDLSDPVERAFVHYLiyapHSRGfmvgPWRSAGRERYYV 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 231 VFGMGDGTSNVGlgvlntsasfKELDWREVLKAWTASMPEEWGYTEenmtgPIRGAALPMAFNRQPHYTKG-LLLVGDAG 309
Cdd:pfam01494 228 QVPWDEEVEERP----------EEFTDEELKQRLRSIVGIDLALVE-----ILWKSIWGVASRVATRYRKGrVFLAGDAA 292

                         330
                  ....*....|....*
gi 1464446992 310 GLVNPFNGEGIAYAM 324
Cdd:pfam01494 293 HIHPPTGGQGLNTAI 307
PRK10015 PRK10015
oxidoreductase; Provisional
 6-361 1.53e-11

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 65.77  E-value: 1.53e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGIDISE--EAGWLRNKgLRII 83
Cdd:PRK10015    2 SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASApvERKVTREK-ISFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  84 GGGHRLQLDW----PDLASFPDYGLVRKRddFDEQLARQAQKAGARLHERCNVGAPItdpRTG-RITGVEAklGEEktpv 158
Cdd:PRK10015   81 TEESAVTLDFhreqPDVPQHASYTVLRNR--LDPWLMEQAEQAGAQFIPGVRVDALV---REGnKVTGVQA--GDD---- 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 159 TFHAPLVVAADGNSTRLSLAMGLHRRED---RPMGVAVRTYFTSPRHDDDYLESWLE--LWDKRGPGPDRLLPG------ 227
Cdd:PRK10015  150 ILEANVVILADGVNSMLGRSLGMVPASDphhYAVGVKEVIGLTPEQINDRFNITGEEgaAWLFAGSPSDGLMGGgflytn 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 228 -----YGWVFGMGD---GTSNVG--LGVLNTSASFKELDWREVLKAWTASMPEEWGYteenmtgpirgAALPMAFNrqph 297
Cdd:PRK10015  230 kdsisLGLVCGLGDiahAQKSVPqmLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGL-----------AMVPQLVN---- 294

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1464446992 298 ytKGLLLVGDAGGL-VN-PFNGEGIAYAMESGQIAADVIVQAHARSTPAQreRALLGYPKVLKETY 361
Cdd:PRK10015  295 --DGVMIVGDAAGFcLNlGFTVRGMDLAIASAQAAATTVIAAKERADFSA--SSLAQYKRELEQSC 356
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 11-195 2.31e-09

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 58.56  E-value: 2.31e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPRE-------KVCGDGLTPRATKQLVAM---------------GIDI 68
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnaGLIHPGLRYLEPSELARLalealdlweeleeelGIDC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  69 -------------SEEAGWLRNKGLRIIGGGHRLQLD-------WPDLASF------PDYGLVRkRDDFDEQLARQAQKA 122
Cdd:pfam01266  81 gfrrcgvlvlardEEEEALEKLLAALRRLGVPAELLDaeelrelEPLLPGLrgglfyPDGGHVD-PARLLRALARAAEAL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1464446992 123 GARLHERCnvgapitdprtgRITGVEAKLGEEKTPVTFHAPLVVAADGNSTRLSLAMGLHRREDRPMGVAVRT 195
Cdd:pfam01266 160 GVRIIEGT------------EVTGIEEEGGVWGVVTTGEADAVVNAAGAWADLLALPGLRLPVRPVRGQVLVL 220
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 7-170 1.71e-08

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 56.38  E-value: 1.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   7 EQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPR-----------------EKVCGD------------GLTPRA 57
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGghtaaaqgginaagtnvQKAAGEdspeehfydtvkGGDGLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  58 TKQLVAMGIDISEEA-GWLRNKGLRIIGGGHrlqldwPDLASFPDYGLVRKRDDFD-------EQLARQAQKAGARLHER 129
Cdd:COG1053    81 DQDLVEALAEEAPEAiDWLEAQGVPFSRTPD------GRLPQFGGHSVGRTCYAGDgtghallATLYQAALRLGVEIFTE 154

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1464446992 130 CNVGAPITDprTGRITGVEAKlGEEKTPVTFHAPLVVAADG 170
Cdd:COG1053   155 TEVLDLIVD--DGRVVGVVAR-DRTGEIVRIRAKAVVLATG 192
PLN02985 PLN02985
squalene monooxygenase
 3-170 1.92e-08

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 56.45  E-value: 1.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   3 EPRTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRATKQLVAMGI-DISEEAGWLRNKGLR 81
Cdd:PLN02985   37 EERKDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMGEFMQPGGRFMLSKLGLeDCLEGIDAQKATGMA 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  82 IIGGGHRLQLDWP-DLASFPDYGLVR--KRDDFDEQLARQAQKAGARLHERCNVGAPITDprTGRITGVEAK--LGEEKT 156
Cdd:PLN02985  117 VYKDGKEAVAPFPvDNNNFPYEPSARsfHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEE--KGVIKGVTYKnsAGEETT 194

                         170
                  ....*....|....
gi 1464446992 157 PVtfhAPLVVAADG 170
Cdd:PLN02985  195 AL---APLTVVCDG 205
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 6-341 2.01e-08

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 56.07  E-value: 2.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREK-VCGDGLTPRATKQLVAmgiDISEEAGWLR---NKGLR 81
Cdd:PRK10157    2 SEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKnVTGGRLYAHSLEHIIP---GFADSAPVERlitHEKLA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  82 IIGGGHRLQLDWPDL----ASFPDYGLVRKRddFDEQLARQAQKAGARLHERCNVGAPITdpRTGRITGVEAKlGEektp 157
Cdd:PRK10157   79 FMTEKSAMTMDYCNGdetsPSQRSYSVLRSK--FDAWLMEQAEEAGAQLITGIRVDNLVQ--RDGKVVGVEAD-GD---- 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 158 vTFHAPLVVAADGNSTRLSLAMGLHRR-EDRPMGVAVRTYFTSPRhddDYLESWLELWDKRGPgpdrllpgyGWVFGMGD 236
Cdd:PRK10157  150 -VIEAKTVILADGVNSILAEKLGMAKRvKPTDVAVGVKELIELPK---SVIEDRFQLQGNQGA---------ACLFAGSP 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 237 GTSNVGLGVLNTSASFKELDW---REVLKAWTASMPEEW-GYTEENMTGP-IRGAAL--------PMA-FNRQPHYTK-G 301
Cdd:PRK10157  217 TDGLMGGGFLYTNENTLSLGLvcgLHHLHDAKKSVPQMLeDFKQHPAVAPlIAGGKLveysahvvPEAgINMLPELVGdG 296

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1464446992 302 LLLVGDAGGLVNP--FNGEGIAYAMESGQIAADVIVQAHARS 341
Cdd:PRK10157  297 VLIAGDAAGMCMNlgFTIRGMDLAIAAGEAAAKTVLSAMKSD 338
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
5-39 1.66e-07

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 53.00  E-value: 1.66e-07
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1464446992   5 RTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLE 39
Cdd:COG1231     3 RRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLE 37
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
11-40 2.09e-07

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 52.81  E-value: 2.09e-07
                          10        20        30
                  ....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:COG2509    32 DVVIVGAGPAGLFAALELAEAGLKPLVLER 61
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 11-170 2.35e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 52.68  E-value: 2.35e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKT--------------AFPREKVCGDGLTP-------------RATKQLVA 63
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGqpfggatawssggiDALGNPPQGGIDSPelhptdtlkgldeLADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  64 MGIDISEEA-GWLRNKGLRIIG--GGHrlqLDWPDLASF------PDYGLVRKRDDFD-----EQLARQAQKAGARLHER 129
Cdd:pfam00890  81 AFVEAAPEAvDWLEALGVPFSRteDGH---LDLRPLGGLsatwrtPHDAADRRRGLGTghallARLLEGLRKAGVDFQPR 157

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1464446992 130 CNVGAPITDPrtGRITGVEAKLGEEKTPVTFHAP--LVVAADG 170
Cdd:pfam00890 158 TAADDLIVED--GRVTGAVVENRRNGREVRIRAIaaVLLATGG 198
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 8-40 2.37e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 52.93  E-value: 2.37e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:COG1233     2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEK 34
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 11-373 2.83e-07

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 52.42  E-value: 2.83e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHL--AKAGLDVLLLEKTA---FPREKV-CGDGLTPRATKQLVamgidiseEAGWlrnKGLRIIG 84
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARLaaAKPGLSVVLIEPGPsllRPNNYVwSDEFEDLGALEDCV--------GHSW---PGTRVHF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  85 GGHRlqldwPDLASFPdYGLVRkRDDFDEQLARQAQKAGARLHErcnvgapitdprtGRITGVEAKLGEEKTPV-----T 159
Cdd:pfam05834  70 DDGK-----PILIGRA-YGRVS-SKRLEEEMLQRCVENGVIRLN-------------AKVESVEADPVGESLVVceggrT 129

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 160 FHAPLVVAADGN-STRLSLAMGLHrredRPMGVAVRTyfTSPRHDDDYleswLELWDKRGPGPDRlLPGYGWVFGMGDG- 237
Cdd:pfam05834 130 IRARLVFDARGLgSLPPGRTLGYQ----TFYGVEVEV--DNPPFDPDV----MVLMDARVPQPLK-GPTFLYALPLDPDr 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 238 -----TSNVGLGVLNTSASFKELDWREVLKAWTAS--MPEEWGYTEENMTGPIRG-AALPMAFnrqphytkglllvGDAG 309
Cdd:pfam05834 199 llveeTYLSSGPVLPFDALKKRLAAYLRALGIRILevVEEEQGVIPMTLGGDLPNtPQKVLRI-------------GAAA 265

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1464446992 310 GLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAQRERALLgYPKVLKETYGGYYSLGRAFVK 373
Cdd:pfam05834 266 GMVHPATGYSVARSLRLAPKLASAIAAALRLSSPSARAWRDL-WPRERWRQRGFFRLLGRMLFL 328
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 5-349 2.93e-07

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 52.55  E-value: 2.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   5 RTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPR-EKVCGDGLTP---RATKQL----VAMGIDISEEagwlr 76
Cdd:PTZ00367   29 RTNYDYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFSKpDRIVGELLQPggvNALKELgmeeCAEGIGMPCF----- 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  77 nkGLRII-GGGHRLQLDWPDLA---SFpDYGlvrkrdDFDEQLAR---QAQKAGARLHERCNVGAPITDPRTG-RITGVE 148
Cdd:PTZ00367  104 --GYVVFdHKGKQVKLPYGAGAsgvSF-HFG------DFVQNLRShvfHNCQDNVTMLEGTVNSLLEEGPGFSeRAYGVE 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 149 AKLGEEK----TP----------------VTFHAPLVVAADGNSTRLSlamglhRRedrpmgvaVRTYFTSPRHDDDYLE 208
Cdd:PTZ00367  175 YTEAEKYdvpeNPfredppsanpsattvrKVATAPLVVMCDGGMSKFK------SR--------YQHYTPASENHSHFVG 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 209 swLELWDKRGPgpdrlLPGYGWVFGMGDG--------TSNVGLGV------LNTSASFKELDWREVLKAWTASMPEEWGY 274
Cdd:PTZ00367  241 --LVLKNVRLP-----KEQHGTVFLGKTGpilsyrldDNELRVLVdynkptLPSLEEQSEWLIEDVAPHLPENMRESFIR 313

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1464446992 275 TEENmTGPIRgaALPMAFnRQPHYT--KGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAQRERA 349
Cdd:PTZ00367  314 ASKD-TKRIR--SMPNAR-YPPAFPsiKGYVGIGDHANQRHPLTGGGMTCCFSDCIRLAKSLTGIKSLRSIDQNEMA 386
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 11-42 4.17e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 51.76  E-value: 4.17e-07
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA 42
Cdd:COG1232     3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD 34
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
14-56 5.30e-07

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 46.76  E-value: 5.30e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1464446992  14 VVGAGPAGSTTAYHLAKAGLDVLLLEKtafpREKVCGDGLTPR 56
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEK----RDRLGGNAYSYR 39
solA PRK11259
N-methyl-L-tryptophan oxidase;
8-40 5.81e-07

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 51.38  E-value: 5.81e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK11259    2 MRYDVIVIGLGSMGSAAGYYLARRGLRVLGLDR 34
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
11-71 8.11e-07

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 50.50  E-value: 8.11e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA----------------FPrEKVCGDGLTPRATKQLVAMGIDISEE 71
Cdd:COG0492     2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEpggqlattkeienypgFP-EGISGPELAERLREQAERFGAEILLE 77
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 11-58 1.26e-06

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 50.21  E-value: 1.26e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFP--REKVCGDGLTPRAT 58
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPhsRGSSHGQSRIIRKA 51
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 11-40 1.59e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 49.86  E-value: 1.59e-06
                          10        20        30
                  ....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:COG2072     8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
PRK07208 PRK07208
hypothetical protein; Provisional
 11-42 4.90e-06

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 48.73  E-value: 4.90e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA 42
Cdd:PRK07208    6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
PRK06184 PRK06184
hypothetical protein; Provisional
 8-56 5.81e-06

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 48.44  E-value: 5.81e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPR 56
Cdd:PRK06184    2 TTTDVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPR 50
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 6-39 7.27e-06

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 48.29  E-value: 7.27e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAK-AGLDVLLLE 39
Cdd:COG2303     1 MLEEYDYVIVGAGSAGCVLANRLSEdAGLRVLLLE 35
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 11-148 2.05e-05

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 46.62  E-value: 2.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKtafprEKVCGD----GLTPraTKQLVAmGIDISEEAGWLRNKGLRIIGgg 86
Cdd:COG1249     5 DLVVIGAGPGGYVAAIRAAQLGLKVALVEK-----GRLGGTclnvGCIP--SKALLH-AAEVAHEARHAAEFGISAGA-- 74

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1464446992  87 hrLQLDWPDLASfpdyglvRKR---DDFDEQLARQAQKAGARLHErcnvG-APITDPRTGRITGVE 148
Cdd:COG1249    75 --PSVDWAALMA-------RKDkvvDRLRGGVEELLKKNGVDVIR----GrARFVDPHTVEVTGGE 127
HI0933_like pfam03486
HI0933-like protein;
11-40 2.53e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 46.03  E-value: 2.53e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:pfam03486   2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEK 31
Trp_halogenase pfam04820
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ...
 11-76 2.66e-05

Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.


Pssm-ID: 398475 [Multi-domain]  Cd Length: 457  Bit Score: 46.17  E-value: 2.66e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKA---GLDVLLLEKTAFPREKVcGDGLTPrATKQLVAM-GIDiseEAGWLR 76
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGV-GEATIP-SIRTFNRMlGID---EAEFLR 65
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
6-39 3.58e-05

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 45.94  E-value: 3.58e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLE 39
Cdd:COG3573     2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLD 35
GIDA pfam01134
Glucose inhibited division protein A;
11-38 4.00e-05

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 45.62  E-value: 4.00e-05
                          10        20
                  ....*....|....*....|....*...
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLL 38
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 11-74 4.91e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.00  E-value: 4.91e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEktafpREKVC-GDGLTPraTKQLVAMGIDISEEAGW 74
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQLGGKVTLIE-----DEGTCpYGGCVL--SKALLGAAEAPEIASLW 59
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
1-211 5.02e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 45.28  E-value: 5.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   1 MNEPRTEQ-TADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK--TAFPRekvcgdgltPRAT-------KQLVAMGID--- 67
Cdd:PRK06183    1 MAAQHPDAhDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERwpTLYDL---------PRAVgiddealRVLQAIGLAdev 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  68 --ISEEAGwlrnkGLRIIGGGHRLQLDWpDLASFPDYGLvRKRDDFDEQL------ARQAQKAGARLHERCNVGApITDP 139
Cdd:PRK06183   72 lpHTTPNH-----GMRFLDAKGRCLAEI-ARPSTGEFGW-PRRNAFHQPLleavlrAGLARFPHVRVRFGHEVTA-LTQD 143

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1464446992 140 RTGRITGVEAKLGEektPVTFHAPLVVAADG-NSTrlslamglhrredrpmgvaVRTYFTSPRHDDDYLESWL 211
Cdd:PRK06183  144 DDGVTVTLTDADGQ---RETVRARYVVGCDGaNSF-------------------VRRTLGVPFEDLTFPERWL 194
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
11-43 6.80e-05

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 45.24  E-value: 6.80e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAF 43
Cdd:COG1148   142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPE 174
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 11-43 9.06e-05

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 44.52  E-value: 9.06e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAF 43
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGF 33
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
6-40 1.30e-04

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 43.98  E-value: 1.30e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKA-GLDVLLLEK 40
Cdd:COG0579     1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEK 36
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 9-39 1.53e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 44.12  E-value: 1.53e-04
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1464446992   9 TADVIVVGAGPAGSTTAYHLAKAGLDVLLLE 39
Cdd:PRK12834    4 DADVIVVGAGLAGLVAAAELADAGKRVLLLD 34
PLN02976 PLN02976
amine oxidase
 12-58 1.64e-04

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 44.09  E-value: 1.64e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*..
gi 1464446992   12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEKtafpREKVCGDGLTPRAT 58
Cdd:PLN02976   696 IIVVGAGPAGLTAARHLQRQGFSVTVLEA----RSRIGGRVYTDRSS 738
PRK09126 PRK09126
FAD-dependent hydroxylase;
8-40 1.78e-04

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 43.39  E-value: 1.78e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK09126    2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIER 34
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 3-40 1.79e-04

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 43.81  E-value: 1.79e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1464446992   3 EPRTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK07804   10 APGWRDAADVVVVGSGVAGLTAALAARRAGRRVLVVTK 47
PRK12843 PRK12843
FAD-dependent oxidoreductase;
11-43 1.94e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 43.57  E-value: 1.94e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAF 43
Cdd:PRK12843   18 DVIVIGAGAAGMSAALFAAIAGLKVLLVERTEY 50
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 10-44 1.95e-04

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 42.46  E-value: 1.95e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1464446992  10 ADVIVVGAGPAGSTTAYHLAKA-GLDVLLLEKTAFP 44
Cdd:pfam01946  18 SDVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSP 53
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
13-40 2.10e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 43.12  E-value: 2.10e-04
                          10        20
                  ....*....|....*....|....*...
gi 1464446992  13 IVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:COG2081     1 IVIGAGAAGLMAAITAAERGARVLLLEK 28
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 6-43 2.25e-04

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 43.53  E-value: 2.25e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAF 43
Cdd:PRK12842    6 NELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEKEPV 43
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 11-44 2.56e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 42.92  E-value: 2.56e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFP 44
Cdd:COG3349     5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRL 38
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 3-40 2.89e-04

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 42.81  E-value: 2.89e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1464446992   3 EPRTEQTadVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:COG0493   117 APRTGKK--VAVVGSGPAGLAAAYQLARAGHEVTVFEA 152
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
6-42 3.11e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 43.10  E-value: 3.11e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA 42
Cdd:PRK07843    4 TVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKAP 40
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 6-42 3.27e-04

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 42.79  E-value: 3.27e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGlDVLLLEKTA 42
Cdd:COG0029     1 ERLKTDVLVIGSGIAGLSAALKLAERG-RVTLLTKGE 36
carotene-cycl TIGR01790
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ...
 11-370 3.62e-04

lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.


Pssm-ID: 130850 [Multi-domain]  Cd Length: 388  Bit Score: 42.42  E-value: 3.62e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKtafprekvcgdgltpratkqlvamgidiSEEAGWLRNKG-----LRIIGG 85
Cdd:TIGR01790   1 DLAVIGGGPAGLAIALELARPGLRVQLIEP----------------------------HPPIPGNHTYGvwdddLSDLGL 52

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  86 GHRLQLDWPDLAS--FPD--------YGLVrKRDDFDEQLARQAQKAGARLHERCNVGApitDPRTGRITGVEAKLGEek 155
Cdd:TIGR01790  53 ADCVEHVWPDVYEyrFPKqprklgtaYGSV-DSTRLHEELLQKCPEGGVLWLERKAIHA---EADGVALSTVYCAGGQ-- 126

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 156 tpvTFHAPLVVAADGNSTRLSL-----------AMGLHRREDRP---MGVAVRTYFTSPRHDDDYLESWLELWDKRGP-G 220
Cdd:TIGR01790 127 ---RIQARLVIDARGFGPLVQYvrfplnvgfqvAYGVEARLSRPphgPSSMVIMDARVDQLAAPELKGYRPTFLYAMPlG 203

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992 221 PDRLLPgygwvfgmgDGTSNVGLGVLNTSASFKELDWREVLKAWTASMP--EEWGYTEENMTGPIRgaalpmafnrqphy 298
Cdd:TIGR01790 204 STRVFI---------EETSLADRPALPRDRLRQRILARLNAQGWQIKTIeeEEWGALPVGLPGPFL-------------- 260

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1464446992 299 TKGLLLVGDAGGLVNPFNGEGIAYAMESGQIAADVIVQAHARSTPAQRErALLGYPKVLKETYGGYYSLGRA 370
Cdd:TIGR01790 261 PQRVAAFGAAAGMVHPTTGYSVARALSDAPGLAAAIAQALCQSSELATA-AWDGLWPTERRRQRYFRLLGRM 331
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 8-40 4.59e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 42.47  E-value: 4.59e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK06292    2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
PRK08244 PRK08244
monooxygenase;
11-170 9.72e-04

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 41.27  E-value: 9.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRaTKQLVAM-GIdiseeAGWLRNKGlRIIGGGH-- 87
Cdd:PRK08244    4 EVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPR-TLEILDMrGL-----LERFLEKG-RKLPSGHfa 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  88 --RLQLDWPDLASFPDYGLVRKRDDFDEQLARQAQKAGA---RLHERCNVgapitdprTGRITGVEAKLGEEKTPVTFHA 162
Cdd:PRK08244   77 glDTRLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVeifRGAEVLAV--------RQDGDGVEVVVRGPDGLRTLTS 148


                  ....*...
gi 1464446992 163 PLVVAADG 170
Cdd:PRK08244  149 SYVVGADG 156
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
11-40 1.18e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 40.91  E-value: 1.18e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK05249    7 DLVVIGSGPAGEGAAMQAAKLGKRVAVIER 36
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 6-40 1.37e-03

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 40.90  E-value: 1.37e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK06416    1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEK 35
PRK00711 PRK00711
D-amino acid dehydrogenase;
12-44 1.57e-03

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 40.55  E-value: 1.57e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992  12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFP 44
Cdd:PRK00711    3 VVVLGSGVIGVTSAWYLAQAGHEVTVIDRQPGP 35
PRK07233 PRK07233
hypothetical protein; Provisional
 14-44 1.74e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 40.26  E-value: 1.74e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1464446992  14 VVGAGPAGSTTAYHLAKAGLDVLLLEKTAFP 44
Cdd:PRK07233    4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQL 34
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 12-40 2.00e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 40.24  E-value: 2.00e-03
                          10        20
                  ....*....|....*....|....*....
gi 1464446992  12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK12771  140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEA 168
PRK12409 PRK12409
D-amino acid dehydrogenase small subunit; Provisional
 12-44 2.22e-03

D-amino acid dehydrogenase small subunit; Provisional


Pssm-ID: 237093 [Multi-domain]  Cd Length: 410  Bit Score: 40.01  E-value: 2.22e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1464446992  12 VIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFP 44
Cdd:PRK12409    4 IAVIGAGITGVTTAYALAQRGYQVTVFDRHRYA 36
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
6-195 2.30e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 39.89  E-value: 2.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLektafprekvcgDGLTPRA---TKQLVAMGIDISEEAG-WLRNKG-- 79
Cdd:PRK07494    4 EKEHTDIAVIGGGPAGLAAAIALARAGASVALV------------APEPPYAdlrTTALLGPSIRFLERLGlWARLAPha 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  80 -----LRIIGGGHRLqLDWP---------DLASF----PDYGLVRkrddfdEQLARQAQKAGArlhERCNVGAPITDPRT 141
Cdd:PRK07494   72 aplqsMRIVDATGRL-IRAPevrfraaeiGEDAFgyniPNWLLNR------ALEARVAELPNI---TRFGDEAESVRPRE 141

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1464446992 142 GRITgVEAKLGEektpvTFHAPLVVAADGnstRLSLAmglhrREdrPMGVAVRT 195
Cdd:PRK07494  142 DEVT-VTLADGT-----TLSARLVVGADG---RNSPV-----RE--AAGIGVRT 179
PRK05335 PRK05335
tRNA (uracil-5-)-methyltransferase Gid; Reviewed
 8-39 3.21e-03

tRNA (uracil-5-)-methyltransferase Gid; Reviewed


Pssm-ID: 235416  Cd Length: 436  Bit Score: 39.74  E-value: 3.21e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLE 39
Cdd:PRK05335    1 MMKPVNVIGAGLAGSEAAWQLAKRGVPVELYE 32
TrmFO COG1206
Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and ...
 11-39 4.75e-03

Folate-dependent tRNA-U54 methylase TrmFO/GidA [Translation, ribosomal structure and biogenesis]; Folate-dependent tRNA-U54 methylase TrmFO/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440819  Cd Length: 436  Bit Score: 38.89  E-value: 4.75e-03
                          10        20
                  ....*....|....*....|....*....
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLE 39
Cdd:COG1206     3 PVTVIGGGLAGSEAAWQLAERGVPVRLYE 31
HpnW_proposed TIGR03364
FAD dependent oxidoreductase TIGR03364; This clade of FAD dependent oxidoreductases (members ...
 11-45 5.06e-03

FAD dependent oxidoreductase TIGR03364; This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.


Pssm-ID: 132407 [Multi-domain]  Cd Length: 365  Bit Score: 38.82  E-value: 5.06e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPR 45
Cdd:TIGR03364   2 DLIIVGAGILGLAHAYAAARRGLSVTVIERSSRAQ 36
PRK06847 PRK06847
hypothetical protein; Provisional
 11-201 5.88e-03

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 38.70  E-value: 5.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTafPREKVCGDGLTP-----RATKQLvamGI-DISEEAGWLRNkGLRI-I 83
Cdd:PRK06847    6 KVLIVGGGIGGLSAAIALRRAGIAVDLVEID--PEWRVYGAGITLqgnalRALREL---GVlDECLEAGFGFD-GVDLfD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464446992  84 GGGHRL-QLDWPDLASfPDY----GLVRKRddFDEQLARQAQKAGARLHERCNVGApITDprtgRITGVEaklgeektpV 158
Cdd:PRK06847   80 PDGTLLaELPTPRLAG-DDLpgggGIMRPA--LARILADAARAAGADVRLGTTVTA-IEQ----DDDGVT---------V 142

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1464446992 159 TF------HAPLVVAADG-NSTRLSLAMGlHRREDRPMGVAV-RTYFtsPR 201
Cdd:PRK06847  143 TFsdgttgRYDLVVGADGlYSKVRSLVFP-DEPEPEYTGQGVwRAVL--PR 190
PRK06370 PRK06370
FAD-containing oxidoreductase;
11-63 6.95e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 38.64  E-value: 6.95e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAGLDVLLLEktafpREKVCGD----GLTPraTKQLVA 63
Cdd:PRK06370    7 DAIVIGAGQAGPPLAARAAGLGMKVALIE-----RGLLGGTcvntGCVP--TKTLIA 56
PRK02106 PRK02106
choline dehydrogenase; Validated
 6-39 7.12e-03

choline dehydrogenase; Validated


Pssm-ID: 235000 [Multi-domain]  Cd Length: 560  Bit Score: 38.66  E-value: 7.12e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHL-AKAGLDVLLLE 39
Cdd:PRK02106    2 TTMEYDYIIIGAGSAGCVLANRLsEDPDVSVLLLE 36
PLN02576 PLN02576
protoporphyrinogen oxidase
 5-50 7.29e-03

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 38.46  E-value: 7.29e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1464446992   5 RTEQTADVIVVGAGPAGSTTAYHLAKA-GLDVLLLEKtafpREKVCG 50
Cdd:PLN02576    8 AAASSKDVAVVGAGVSGLAAAYALASKhGVNVLVTEA----RDRVGG 50
PRK07190 PRK07190
FAD-binding protein;
8-65 7.57e-03

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 38.64  E-value: 7.57e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1464446992   8 QTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTAFPREKVCGDGLTPRaTKQLVAMG 65
Cdd:PRK07190    4 QVTDVVIIGAGPVGLMCAYLGQLCGLNTVIVDKSDGPLEVGRADALNAR-TLQLLELV 60
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 4-68 7.80e-03

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 38.24  E-value: 7.80e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1464446992   4 PRTEQTadVIVVGAGPAGSTTAYHLAKAGLDVLLLEKtafpREKVCG------------DGLTPRATKQLVAMGIDI 68
Cdd:PRK11749  137 PKTGKK--VAVIGAGPAGLTAAHRLARKGYDVTIFEA----RDKAGGllrygipefrlpKDIVDREVERLLKLGVEI 207
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
5-40 8.81e-03

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 38.68  E-value: 8.81e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1464446992   5 RTEQTADVIVVGAGPAGSTTAYHLAKAGLDVLLLEK 40
Cdd:PRK13800    9 ALRLDCDVLVIGGGTAGTMAALTAAEHGANVLLLEK 44
PRK07121 PRK07121
FAD-binding protein;
9-42 8.96e-03

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 38.33  E-value: 8.96e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1464446992   9 TADVIVVGAGPAGSTTAYHLAKAGLDVLLLEKTA 42
Cdd:PRK07121   20 EADVVVVGFGAAGACAAIEAAAAGARVLVLERAA 53
PRK11445 PRK11445
FAD-binding protein;
11-68 9.11e-03

FAD-binding protein;


Pssm-ID: 183139 [Multi-domain]  Cd Length: 351  Bit Score: 38.12  E-value: 9.11e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1464446992  11 DVIVVGAGPAGSTTAYHLAKAgLDVLLLEKTAF----PREKVCGDGLTPRATKQLVAMGIDI 68
Cdd:PRK11445    3 DVAIIGLGPAGSALARLLAGK-MKVIAIDKKHQcgteGFSKPCGGLLAPDAQKSFAKDGLTL 63
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
6-44 9.54e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 38.01  E-value: 9.54e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1464446992   6 TEQTADVIVVGAGPAGSTTAYHLAK---AGLDVLLLEKTAFP 44
Cdd:COG4529     2 TGARKRIAIIGGGASGTALAIHLLRrapEPLRITLFEPRPEL 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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