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Conserved domains on  [gi|1464308854|ref|YP_009507231|]
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hypothetical protein D1R32_gp469 [Tunisvirus fontaine2]

Protein Classification

toxin-antitoxin system YwqK family antitoxin( domain architecture ID 706116)

toxin-antitoxin (TA) system YwqK family antitoxin similar to YwqK (RtbO) antitoxin, the antitoxin component of the YwqJK (RtbNO) TA system that is encoded in the chromosome of Bacillus subtilis subsp. subtilis str. 168

PubMed:  31075979

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YwqK super family cl26911
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
90-178 3.60e-04

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


The actual alignment was detected with superfamily member COG2849:

Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 40.05  E-value: 3.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464308854  90 QEYKNGKKHGKYTFY----RIRYkephclekdeifttEGSFRHGKPHGVFTNTHR-GILQETCLFSNGRLVECAEYLFPN 164
Cdd:COG2849    83 GTYKNGKLEGEWKEYyengKLKS--------------EGNYKNGKLHGEWKEYYEnGKLKEEGNYKNGKKDGVWKYYDEN 148

                          90
                  ....*....|....
gi 1464308854 165 RRLLWTTFSTNEKE 178
Cdd:COG2849   149 GKLVKEEEYKNGKK 162
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
90-178 3.60e-04

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 40.05  E-value: 3.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464308854  90 QEYKNGKKHGKYTFY----RIRYkephclekdeifttEGSFRHGKPHGVFTNTHR-GILQETCLFSNGRLVECAEYLFPN 164
Cdd:COG2849    83 GTYKNGKLEGEWKEYyengKLKS--------------EGNYKNGKLHGEWKEYYEnGKLKEEGNYKNGKKDGVWKYYDEN 148

                          90
                  ....*....|....
gi 1464308854 165 RRLLWTTFSTNEKE 178
Cdd:COG2849   149 GKLVKEEEYKNGKK 162
 
Name Accession Description Interval E-value
YwqK COG2849
Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];
90-178 3.60e-04

Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms];


Pssm-ID: 442097 [Multi-domain]  Cd Length: 163  Bit Score: 40.05  E-value: 3.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1464308854  90 QEYKNGKKHGKYTFY----RIRYkephclekdeifttEGSFRHGKPHGVFTNTHR-GILQETCLFSNGRLVECAEYLFPN 164
Cdd:COG2849    83 GTYKNGKLEGEWKEYyengKLKS--------------EGNYKNGKLHGEWKEYYEnGKLKEEGNYKNGKKDGVWKYYDEN 148

                          90
                  ....*....|....
gi 1464308854 165 RRLLWTTFSTNEKE 178
Cdd:COG2849   149 GKLVKEEEYKNGKK 162
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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