|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
1.89e-177 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 495.52 E-value: 1.89e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 146289862 321 KLTANLSPLIILSTLILPLSPMLALLE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.10e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 366.82 E-value: 1.10e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTiNLDLLLLMSIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 146289862 321 KLTANLSPLIILSTLILPLSP-MLALL 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPaILALL 346
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
5.29e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 344.88 E-value: 5.29e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|...
gi 146289862 321 KLTaNLSPLIILSTLILPLSPML 343
Cdd:MTH00112 321 KNT-LTATLTTLSTLLLPLSPMI 342
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.16e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 331.12 E-value: 1.16e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 146289862 321 KLTAnLSPLIILSTLILPLSPMLALL 346
Cdd:MTH00070 321 TNNL-LSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-339 |
2.04e-91 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 277.20 E-value: 2.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....
gi 146289862 321 K-----LTANLSPLIILSTLILPL 339
Cdd:MTH00041 321 ItvygvILSILSSISILGLLLIPL 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.53e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 264.52 E-value: 1.53e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 SGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKWQfNNK 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR-TKS 319
|
330 340
....*....|....*....|....*.
gi 146289862 321 KLTANLSPLIILSTLILPLSPMLALL 346
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.20e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 180.40 E-value: 5.20e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 1 MNPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLty 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 sgqwSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQIsptINLDLLLLMSIL 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 161 SILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 241 TTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYStslTMFPSTNNMKVKWQFNNK 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 146289862 321 KLTANLSPLIILSTLILPLSPMLALL 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
8-315 |
1.84e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.53 E-value: 1.84e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 8 MILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSMt 87
Cdd:MTH00144 8 LFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 88 kplnstaSIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMS-ILSILVGG 166
Cdd:MTH00144 87 -------MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVIsVLSALVGS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 167 WGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMwNKMPLLTTAILT 246
Cdd:MTH00144 160 IGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIIS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146289862 247 IMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTSLTMFPSTNNMKVKW 315
Cdd:MTH00144 239 LLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-341 |
4.81e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 156.86 E-value: 4.81e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 12 TVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVInltysgQWSMTKPLN 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 92 STASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSILSILVGGWGGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 172 QTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLLTTAILTIMLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 252 GGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLtystsltMFPSTNNMKVKWQFNNKKLTANLSPLII 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-------IFNFMYLSPTFSSLKSAPYEPKTKILIS 320
|
330
....*....|
gi 146289862 332 LSTLILPLSP 341
Cdd:MTH00011 321 MCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-339 |
4.79e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 135.57 E-value: 4.79e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 8 MILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLtysgqwsMT 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 88 KPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPtiNLDLLLLMSILSILVGGW 167
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 168 GGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYILLTTTTFVMLMVDSSTTTLSLSHMWNKMPLLTTAILTI 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 248 MLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYSTsltmFPSTNNMKVKwqfnNKKLTANLS 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS----LILSNWMINF----LMKINLLYS 304
|
330
....*....|..
gi 146289862 328 PLIILSTLILPL 339
Cdd:MTH00197 305 GLFILLMMMLPL 316
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-296 |
1.94e-27 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 112.13 E-value: 1.94e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 6 FTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIV--------I 76
Cdd:COG1007 104 FYALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISllygatgsL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 77 NLTYSGQWSMTKPLNST---ASIIMTLA-MAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLD 152
Cdd:COG1007 184 NLAGIAAALAAGGANSPlllLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 153 LLLLMSILSI-------LVGGWGGLNQTQLRKILAYSSIAHMGWM-TAIMVYNPTM---ALLNLAIYILLTTTTFVMLMV 221
Cdd:COG1007 264 LAADWQLLLAvlavlsmTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLGvsaALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 222 ----DSSTTTLS-LSHMWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRL 296
Cdd:COG1007 344 lsrkGGEAEEIEdLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
6.02e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 109.35 E-value: 6.02e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 13 VMLGTAIVMTTSHWVMAWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIV-------------INL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 79 TYSGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINldLLLLMS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 159 ILSILVGGWGGLNQTQLRKILAYSSIAHMG---WMTAIMVYNPTMA-LLNLAIYILLTTTTFVMLMVDSSTTTL--SLSH 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFESIQAsLVYLFIYIIMSICVFSIILALNVYKNLiiEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 146289862 233 MWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRL 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
25-268 |
5.05e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.09 E-value: 5.05e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 25 HWVMAWIGFEMNMLAIIP-ILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSMT-----------KPLNS 92
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskaltgglnSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 93 TASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILL-TWQKLAP-----MSILYQISPTINLDLLLLMSILSILVGG 166
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 167 WGGLNQTQLRKILAYSSIAHMGWMTAIM----VYNPTMALLNLAIYILLTTTTF-----VMLMVDSSTTTLSLSHMWNKM 237
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAKTM 242
|
250 260 270
....*....|....*....|....*....|.
gi 146289862 238 PLLTTAILTIMLSLGGLPPLSGFTPKWMIIQ 268
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
6-332 |
5.31e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.80 E-value: 5.31e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 6 FTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQW 84
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLfILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 85 SMtKPLNSTAS-----IIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSI 159
Cdd:MTH00199 179 SI-QGINSILTgdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVLS 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 160 LSilVGGWGGLNQTQLRKILAYSSIAHMG---WMTAIMVYNPTMA-LLNLAIYILLTTTTFVMLMVDSSTTTL--SLSHM 233
Cdd:MTH00199 258 II--YGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQAsLIYMIIYVIMSICSFSIILSLKLTKGLivEVSGL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 234 WNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLtysTSLTMFPSTNNMKV 313
Cdd:MTH00199 336 SRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV---VQIIYFQADYSILI 412
|
330
....*....|....*....
gi 146289862 314 KWQFNNKKLTANLSPLIIL 332
Cdd:MTH00199 413 WQKVLKKEERLDLSKSILI 431
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-296 |
1.38e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 92.19 E-value: 1.38e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 6 FTMILLTVmLGTAIVMTTSHWVMAWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSG-- 82
Cdd:PRK05777 106 YLLVLFAL-LGMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGsl 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 83 ----------QWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQI------- 145
Cdd:PRK05777 185 sfagiakalaDGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLlvvafgg 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 146 SPTINLDLLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWM-TAIMVYNPTM---ALLNLAIYILLTTTTFVMLMV 221
Cdd:PRK05777 265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlVGLAAGTAEGysaVLFYLLAYLFMTLGAFGVISL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 222 ----DSSTTTLS-LSHMWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRL 296
Cdd:PRK05777 345 lrrkGGEAESISdFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-338 |
6.80e-20 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 90.39 E-value: 6.80e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 6 FTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAI-IPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVI-------- 76
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLiygftgsl 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 77 ----NLTYSGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTI--- 149
Cdd:TIGR01770 184 nfedLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 150 ----NLDLLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGW----MTAIMVYNPTMALLNLAIYILLTTTTFVMLMV 221
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiligLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 222 DSST------TTLSLSHMWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMR 295
Cdd:TIGR01770 344 LRSYkdewieYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 146289862 296 LtystSLTMFPSTNN--MKVKWQFNNKKLTANLSPLIILSTLILP 338
Cdd:TIGR01770 424 V----VKVMYFDKPErrIPSNPQSKAQSLLLSISALFILFLGLFP 464
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
5-296 |
7.28e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.82 E-value: 7.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 5 IFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQW 84
Cdd:COG0651 108 RFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 85 SMT----------KPLNSTASIIMTLAMAMKLGLAPFHFWVPE-----------VTQGVQLSSGL--ILLTWQKLAPMSI 141
Cdd:COG0651 188 NMAdlaarlaeldPGLLLAAFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADP 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 142 LYQISPTInldllLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYIL---LTTTTFVM 218
Cdd:COG0651 268 ALFLGTLL-----LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhaLAKALLFL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 219 L--MVDSSTTTLSLSHM---WNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFY 293
Cdd:COG0651 343 AagAIERATGTRDLDKLgglGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYF 422
|
...
gi 146289862 294 MRL 296
Cdd:COG0651 423 VRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-267 |
9.83e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.04 E-value: 9.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 9 ILLTVMLGTAIVMTTSHWVMAWIGFEMNMLAIIPILMKKYNPRSM---------EASTKYFLTQATASMLLMLAIVINLT 79
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 80 YSGQWSMTKPL--------------NSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILyqI 145
Cdd:MTH00198 273 FTGNEGMLGTIlsatlettnielrqGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--T 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 146 SPTINLDLLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTaIMVYNPTMALLN-----LAIYILLTTTTFVMLM 220
Cdd:MTH00198 351 SLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIL-IGVSAGTYESLQaswtyAVTYLVSALASFTVIC 429
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 146289862 221 VDSSTTTLS---------------------LSHMWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMII 267
Cdd:MTH00198 430 TLEEFGTRTptsrqrdgsfgnynlvrrlvdLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-339 |
2.76e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.19 E-value: 2.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 50 PRSMEASTKYFLTQATASmLLMLAIVINLTYSGQWS------MTKPLNSTASIIMTL----AMAMKLGLAPFHFWVPEV- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGS-LLMLLAILGLYFLGGGTfdllelLNLPLPFGVQTWLFLaffiAFAVKVPLFPLHTWLPDAh 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 119 ----TQGVQLSSGLILltwqKLAP---MSILYQISP---TINLDLLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:TIGR01972 231 veapTAGSVILAGVLL----KMGTygfLRFNLPLFPdasLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 189 WMT-AIMVYNPTM---ALLNLAIYILLTTTTFVML-MVDSSTTTLSLSHM---WNKMPLLTTAILTIMLSLGGLPPLSGF 260
Cdd:TIGR01972 307 FVLlGIFSFNELGisgAVFQMISHGLITAALFLLVgVLYERAHTRDIAKYgglANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146289862 261 TPKWMIIQEMTKndSMITPTIMAVMTLLnlyfymrLTYSTSLTMFPSTNNMKVKWQFNNKKLTANLSPLIILSTLILPL 339
Cdd:TIGR01972 387 VGEFLILLGSFK--VNPVVAFLAALGIV-------LAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLI 456
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
1.64e-10 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 55.73 E-value: 1.64e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 146289862 291 YFYMRLTYSTSLTMFPSTNNMKVKWQFNNKKLTANLSPLIILSTLILPLSP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-267 |
1.95e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 61.64 E-value: 1.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 50 PRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWS------MTKPLNSTASII----MTLAMAMKLGLAPFHFWVPEV- 118
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiaelAAAPLPLTAQLLlflaFFIAFAVKVPMFPFHTWLPDAh 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 119 ----TQGVQLSSGLIL----------------LTWQKLAPM-------SILYqisptinldllllmsilsilvGGWGGLN 171
Cdd:COG1008 237 veapTAGSVLLAGVLLkmggygllrfalplfpEASAYFAPLlaalgviGIIY---------------------GALVALA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 172 QTQLRKILAYSSIAHMGWMT-AIMVYNPTM---ALLNLAIYILLTTTTFVML-MVDSSTTTLSLSHM---WNKMPLLTTA 243
Cdd:COG1008 296 QTDLKRLIAYSSVSHMGFVLlGIFALNPLGlqgAVLQMVSHGLITAALFLLVgVLYDRTHTRDIADLgglAKRMPVLAAL 375
|
250 260
....*....|....*....|....
gi 146289862 244 ILTIMLSLGGLPPLSGFTPKWMII 267
Cdd:COG1008 376 FLLAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
6-260 |
2.54e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 61.61 E-value: 2.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 6 FTMILLTVMLGTAIVMTTSHWVMAWIGFEMnmLAIIPILMKKY---NPRSMEASTKYFLTQATASMLLMLAIviNLTY-- 80
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTGYmkrDPRSNEAALKYLLIGAASSAIFLYGS--SLLYgl 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 81 -SGQWSMTK---PLNSTASIIMTLAM-------AMKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLA----PMSILYQI 145
Cdd:PRK02504 188 sGGSTQLSAialALITSPSLGLALALvfviagiAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 146 SPTINL---DLLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNP----TMALLNLAIYILLTTTTFVM 218
Cdd:PRK02504 268 FPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFAC 347
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 146289862 219 LMVDSSTT----TLSLSHMWNKMPLLTTAILTIMLSLGGLPPLSGF 260
Cdd:PRK02504 348 VILFSLRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
49-270 |
5.74e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 60.55 E-value: 5.74e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 49 NPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSMTKPLNSTASII----MTLAMAM-------KLGLAPFHFWVPE 117
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILssplLTLILLLlllgafgKSAQFPLHFWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 118 -----------------VTQGVQLssglilltwqkLAPMSILYQISPTInLDLLLLMSILSILVGGWGGLNQTQLRKILA 180
Cdd:COG1009 237 amegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVW-LTVVAIIGAITALFAALIALAQTDIKRVLA 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 181 YSSIAHMGWMTAIMVYNPTMAllnlAIYILLTTTTFVMLM------VDSSTTTLSLSHM---WNKMPLLTTAILTIMLSL 251
Cdd:COG1009 305 YSTVSQLGYMFLALGVGAYVA----ALFHLLTHAFFKALLflgagsVIHATGTRDIRKMgglRKKMPITAITFLIGALSL 380
|
250
....*....|....*....
gi 146289862 252 GGLPPLSGFTPKWMIIQEM 270
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAA 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-282 |
8.02e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.01 E-value: 8.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 2 NPLIFTMILLTVMLGTAIVMTTSHWVMAWIGFEMNMLA--IIPILMKKYNprsMEASTKYFLTQATASMLLMLAIVINLT 79
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfMMVPMGKKES---RKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 80 YSGQWS--------MTKPLNSTASIIMTLAMAM---KLGLAPFHFWVPEV------TQGVQLSSGLI------------L 130
Cdd:PRK08668 173 KTGTFDfadisqglINDTSTGFALIVFLFLLAFgvaKAGIFPLHVWAPDAyseapqSFSAVLSGQLSklgaygfllvlyV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 131 LTWQKLAPMSILYQISPTINLDLLLLMSILSIlVGGWGGLNQTQLRKILAYSSIAHMGW-------MTAIMVYNPTMALL 203
Cdd:PRK08668 253 LPGTKLFSEFGTYRGVPLFNYILAWLGNISII-VGTLMAILQEDIKKLIAYSSVANGGYilvglglGTSLGFAGGLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 204 NLAIYILLTTTTFVMLMVDSSTTTLS-LSHMWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIM 282
Cdd:PRK08668 332 NHALFKGLFFLIFAAVIYRTGTTKISeMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-298 |
2.04e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 58.74 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 49 NPRSMEASTKYFLTQATASMLLMLAIVinLTYSgqwsMTKPLN--------------STASIIMTLAMAMKLGLAPFHFW 114
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVG--LLYG----VTGTLNmadlagalaenptvVTAFGFVLLALALKAAVFPLHTW 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 115 VPEVTQGVQLSSGLILLTWQKLAPMSILYQISPTINLDLLLLMSILSIL----------VGGWGGLNQTQLRKILAYSSI 184
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWLlavlallsmlVGSLAALGQDDVKRVLAYSTV 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 185 AHMGWMTA-IMVYNPTM---ALLNLAIYILLTTTTFV---MLMVDSSTTTLS-LSHMWNKMPLLTTAILTIMLSLGGLPP 256
Cdd:PRK08375 305 SQMGYILLgLALLTPLAlaaGLLHLLHHALMKGALFLaagAIEVTYGTRRLSeLSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 146289862 257 LSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTY 298
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-296 |
3.15e-09 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 58.09 E-value: 3.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 51 RSMEASTKYFLTQATASMLLMLAIVINLTYSG----------QWSMTKPLNSTAS----IIMTLAMAMKLGLAPFHFWVP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGgeielqeivnGLINTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 117 EVTQG-----------VQLSSGLILLTwqklAPMSILYQISPTINLDLLLLMSILSILVGGWGGLNQTQLRKILAYSSIA 185
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALAT----RIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 186 HMGW-MTAIMVYNP----TMALLNLAIYILLTTTTFVMLMVDSSTTTL----SLSHMWNKMPLLTTAILTIMLSLGGLPP 256
Cdd:CHL00049 315 QIGYvIIGIIVGDSndgyASMITYMLFYIFMNLGTFACIVLFGLRTGTdnirDYAGLYTKDPFLALSLALCLLSLGGIPP 394
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 146289862 257 LSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRL 296
Cdd:CHL00049 395 LAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-337 |
8.20e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 8.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 48 YNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSM----------TKPLNSTASIIMTLAMAMKLGLAPFHFWVPE 117
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylavkmsenPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 118 VTQGVQLSSGLILLTWQK---LAPMSILYQI-SPTINLDL----LLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:PRK08376 246 AYPAAPSSISAMLLVIKQaglYALARVLFSIyGPAINLATvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 190 M-----TAIMVY-NPTMA-------------LLNLAIYILLTTTTFVMLMVDSSTTTLS-LSHMWNKMPLLTTAILTIML 249
Cdd:PRK08376 326 MllglgVGLAALgDPAMAsygeialaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNeLGGLARTMPKTTIAFLIGAA 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 250 SLGGLPPLSGFTPKWMIIQEMTKNDSMITpTIMAVMTLLNLYFYMRLTYSTSLTMfPSTNNMKVKwqfnnKKLTANLSPL 329
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSALFNPILG-VIAMIGSVLTLASFVKVFHTAFFGP-PSEKVMNVK-----EPPKPMLVPM 478
|
....*...
gi 146289862 330 IILSTLIL 337
Cdd:PRK08376 479 LILAIAII 486
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-299 |
2.01e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 52.28 E-value: 2.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 47 KYNPRSMEASTKYFLTQATASMLLMLAIVI-----------NLTY-SGQWSMTKPLNSTASIIMTLAMAM---------K 105
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmaDLSAkIRGLSFPLTGGLAGNPPLALGVALalalwaftiK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 106 LGLAPFHFWVPEV-----------TQGVQLSSG-------LILLTWQKLAPMSILYQISPTInldllLLMSILSILVGGW 167
Cdd:PRK12667 237 AAIFPNHFWLPDAhpaapspvsamLSGLVVNVGayaiirfLYTIFGISPSLIDFRAALSPIL-----IILGAVSAIIGAL 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 168 GGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYI--------LLTTTTFVMLMVDSSTTTLSLSHMWNKMPL 239
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 240 LTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTYS 299
Cdd:PRK12667 392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
93-263 |
9.81e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 9.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 93 TASIIMTLAMA--MKLGLAPFHFWVPEVTQGVQLSSGLILLTWQKLAPMSILYQISP-----TINLDLLLLMSILSILVG 165
Cdd:PRK12650 207 TTVVAVLIAVAafTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPvfhdvAVWNWLLIIVGMITALMG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 166 GWGGLNQTQLRKILAYSSIAHMGWMTA-IMVYNP---TMALLNLAIYILLTTTTFVML-MVDSSTTTLS---LSHMWNKM 237
Cdd:PRK12650 287 AVFAVQKTDLKKLTAYSTVSQLGWIVAtIGVGTPfalTAAVVHTLAHALFKSSLFMLIgVVDHQAGTRDirrLGSLWRRM 366
|
170 180
....*....|....*....|....*.
gi 146289862 238 PLLTTAILTIMLSLGGLPPLSGFTPK 263
Cdd:PRK12650 367 PFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
33-337 |
1.40e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.95 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 33 FEMNMLAIIPILMKKYNPRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSM------------TKPLnSTASIIMTL 100
Cdd:PRK12663 137 FEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMahiamrlndmgdTATL-TTIALLFLL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 101 AMAMKLGLAPFhFWVPEV--TQGVQLSSGLI-LLT----WQKLAPMSILYQISPTINLDLLLLMSILSILVGGWGGLNQT 173
Cdd:PRK12663 216 AFGMKAALFPF-MWLPAAyhTPNTEVAALFAaLLTkvgiYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYK 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 174 QLRKILAYSSIAHMGWMTAIMVYNpTMALLNLAIY-----ILLTTTTF----VMLMVDSSTTTLSLSHMWNKMPLLTTAI 244
Cdd:PRK12663 295 DIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFylvhdMVVKTALFliagSLVRLTGYRSLQYLGGLYRKEPLFGALF 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 245 LTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRLTystsLTMFPSTNNMKVKWQfnNKKLTA 324
Cdd:PRK12663 374 LILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF----FLAYWGDKDGEEVNF--KPIPLY 447
|
330
....*....|...
gi 146289862 325 NLSPLIILSTLIL 337
Cdd:PRK12663 448 RKLPLSILAVVVI 460
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-263 |
1.43e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.92 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 62 TQA----TASMLLMLA-IVINLTYSGQWSMTKPLNS-------TASIIMTLAMAM-KLGLAPFHFWVPE----------- 117
Cdd:PRK12644 160 LQAllvtTAGGLAMLVgIIILGQAAGTYRLSELLADpptgpavSVAVVLILVGALsKSAIVPFHFWLPGamaaptpvsay 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 118 ------VTQGVQLSSglilltwqKLAPM-SILYQISPTInldllLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK12644 240 lhaaamVKAGIYLVA--------RLAPGfADVPVWRPTV-----LVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 191 TAIMVY-NPTMALLNLAIYI---LLTTTTF-VMLMVDSSTTTLS---LSHMWNKMPLLT-TAILTIMlSLGGLPPLSGFT 261
Cdd:PRK12644 307 TVLVGIgTRDAALAGLAMLLahaLFKAALFlVVGIIDHSTGTRDirkLSGLGRRQPVLAvVAALAAA-SMAGLPPLLGFV 385
|
..
gi 146289862 262 PK 263
Cdd:PRK12644 386 AK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
175-296 |
7.04e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.34 E-value: 7.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 175 LRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYIL---LTTTTFVMLMVDSS-----TTTLSLSHMWNKMPLLTTAILT 246
Cdd:PRK12662 303 IKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsIVKSALFMVSGSISyhfgtTKLEDCLNLWKSMPKITLAFVL 382
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 146289862 247 IMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMAVMTLLNLYFYMRL 296
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-263 |
8.01e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 44.52 E-value: 8.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 164 VGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNLAIYIL---LTTTTFVML--MVDSSTTTLSLSHM---WN 235
Cdd:PRK12647 272 TGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVahsLYKGALFMVagIIDHETGTRDITKLgglRR 351
|
90 100
....*....|....*....|....*...
gi 146289862 236 KMPLLTTAILTIMLSLGGLPPLSGFTPK 263
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAK 379
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
60-290 |
1.40e-04 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 43.75 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 60 FLTQATASMLLMLAIVINLTYSG--------QWSMTKPLNSTASIIMTLAM----AMKLGLAPFHFWVPEVTQG------ 121
Cdd:PRK07390 177 FLTKRVGDLLLLMGVVALSPLAGtlnfsdlaAWAATANLDPLTATLLGLALiagpTGKCAQFPLHLWLDEAMEGpnpasi 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 122 ----VQLSSGLILLTwqKLAPmsiLYQISPTINLDLLLLMSilsilVGGWGG----LNQTQLRKILAYSSIAHMGWM-TA 192
Cdd:PRK07390 257 lrnsVVVATGAWVLI--KLQP---VLALSPVALTVLIVIGT-----VTAIGAslvaIAQIDIKRALSYSTSAYLGLVfIA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 193 IMVYNPTMALLNLAIYILLTTTTFVML-MVDSSTTTLSLSHM---WNKMPLLTTAILTIMLSLGGLPPLSGFtpkWMIIQ 268
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVgSIILTTITQDLTELgglWSRMPATTLAFLVGSAGLVALLPLGGF---WALLR 403
|
250 260
....*....|....*....|..
gi 146289862 269 eMTKNDSMITPTIMAVMTLLNL 290
Cdd:PRK07390 404 -LADGLWAVSPWLVGVLLLVNA 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
8.75e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 8.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 100 LAMAMKLGLAPFHFWVPE------VTQGVQLSS--------GLILLTW-------QKLAPMSILYQISPTInldllllms 158
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKahveapVAGSVLLAGillklggyGLVRLSWpilplgaQNLAPAVIAMGIVGIV--------- 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 159 ilsilVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYNPTMALLNlAIYILLTTTTFVMLMVDSSTTTLSLSH------ 232
Cdd:MTH00226 309 -----YGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTG-SIFIMLAHGIVSSLLFILVTILYDRHHtrliky 382
|
170 180 190
....*....|....*....|....*....|....*...
gi 146289862 233 ---MWNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMII 267
Cdd:MTH00226 383 yrgLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
49-268 |
1.18e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.52 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 49 NPRSMEASTKYFLTQATASMLLMLAIVINLTySGQWSMTK----PLNSTASIIMTLAMAMKLGLAPFHFWVPEVTQGVQL 124
Cdd:MTH00207 133 NPKSLGAGMITALTNRIGDVMLLLSIGWTLN-QGHWSITNmwqtDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTP 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 125 SSGLILLTWQKLAPMSILYQISPTINLD-----LLLLMSILSILVGGWGGLNQTQLRKILAYSSIAHMGWMTAIMVYN-P 198
Cdd:MTH00207 212 VSALVHSSTLVTAGVFLLIRFYPFLSSTywfnpALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmP 291
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 146289862 199 TMALLNLAIYILLTTTTFVML--MVDSSTTTLSLSHM---WNKMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQ 268
Cdd:MTH00207 292 KLALFHLITHALFKALLFVCAgsLIHSHHHSQDLRTMgnlTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
172-288 |
1.53e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 40.34 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 172 QTQLRKILAYSSIAHMGWM---TAIMVYNPTMALLNLAIYIL----------LTTTTFVMlmvdsSTTTLSL---SHMWN 235
Cdd:PRK06525 293 QQDMKRLLAYSTITQLGYMffgLSLAILGSRLALEGSIAYIFnhafakslffLVAGALSY-----SCGTRLLprlRGVLK 367
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 146289862 236 KMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEmTKNDSMITPTIMAVMTLL 288
Cdd:PRK06525 368 KLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAA-GFELSVEYWILLPAMVLL 419
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-255 |
2.49e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.65 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 100 LAMAMKLGLAPFHFWVPE-----------VTQGVQLS---SGLILLTWQKLAPMSILYqiSPTInldllLLMSILSILVG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQahveapvagsvILAGVLLKlggYGFIRFSWPLLPEASEYF--SPLI-----QTLSLLAIIYG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 166 GWGGLNQTQLRKILAYSSIAHMGWMTaIMVYNPTMALLNLAIYILL-----TTTTF--VMLMVDSSTTTLSLSH--MWNK 236
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMGLVT-LGIFSHTIQGLVAAIFLMLahglvSSALFiaVTFLYERHHTRLIKYYrgMVIT 365
|
170
....*....|....*....
gi 146289862 237 MPLLTTAILTIMLSLGGLP 255
Cdd:MTH00217 366 MPLFGILMLLLVLANASIP 384
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
164-291 |
3.53e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.18 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 164 VGGWGGLNQTQLRKILAYSSIAHMGWMT-AIMVYNP---TMALLNLAIYILLTTTTF-VMLMVDSSTTTLSLSHMWN--- 235
Cdd:PRK12665 286 VGILGAIAQSDIKRLLSFTLVSHIGYMVfGIALSTVaglSGAIYYVAHHITVQTTLFlVVGLIERQAGSSSLRRLGGlak 365
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 146289862 236 KMPLLTTAILTIMLSLGGLPPLSGFTPKWMIIQEMTKNDSMITPTIMA---VMTLLNLY 291
Cdd:PRK12665 366 ASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWLAWALVAggvVTSLLTLY 424
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
170-298 |
5.42e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.47 E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 170 LNQTQLRKILAYSSIAHMGWMTAIMVYN-PTMALLNLAIYILLTTTTF-----VMLMVDSSTTTLSLSHMWNKMPLLTTA 243
Cdd:MTH00209 258 NVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFicagnIIHSHGHSQDIRMVGNLWYQMPITSIC 337
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 146289862 244 ILTIMLSLGGLPPLSGFTPKWMIIQEMTKND-SMITPTIMAVMTLLNLYFYMRLTY 298
Cdd:MTH00209 338 LNIANLSLCGIPFLAGFYSKDLILESMLESNmPIMTLILMFLSTSLTAAYSMRLSY 393
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-268 |
7.29e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 38.34 E-value: 7.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 50 PRSMEASTKYFLTQATASMLLMLAIVINLTYSGQWSMT--KPLNSTASIIMTLAMAMKLGLAPFHFWVPE------VTQG 121
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGaiAGLGGTAAWLILIGFGVNAAFPPLHAWLPDaypeatVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 122 VQLS---------------SGLILLTWQKLApMSIlyqisptinldllllmsilsilVGGWGGLNQTQLRKILAYSSIAH 186
Cdd:PRK12668 219 VFLSafttktavyalarafPGTELLIYIGAA-MAV----------------------YGVFFALLENDLRRLLSYHIVSQ 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 187 MGWM-------TAIMVyNPTMA-LLNLAIY--ILLTTTTFVMLMVDSSTTTlSLSHMWNKMPLltTAILTIM--LSLGGL 254
Cdd:PRK12668 276 VGYMvagigigTALAI-NGAVAhAFNHILYkgLLFMSAGAVLYRTGTEKLT-ELGGLYRSMPL--TALFCLVgaLSISAF 351
|
250
....*....|....
gi 146289862 255 PPLSGFTPKWMIIQ 268
Cdd:PRK12668 352 PLFSGFVSKSMIIS 365
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-288 |
9.08e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 37.70 E-value: 9.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 55 ASTKYFLTQATASMLLMLA----------IVINLTYSGQWSMTKPLNSTASIIMTLAMAMKLGLAPFHFWVPE------- 117
Cdd:PRK12561 138 AATKFILYTALASIFILVAglalalsgdtFTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDahgeasa 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 118 ----VTQGVQLSSG---LILLTWQ-------KLAPMSILYQISPTInldllllmsilsilvggWGGLN---QTQLRKILA 180
Cdd:PRK12561 218 pvsmILAGVLLKMGgyaLIRFNVQmlpdahvYFAPALAILGVVNII-----------------YGALNafaQDNVKRRLA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146289862 181 YSSIAHMGW-MTAIMVYNP---TMALLNLAIYILLTTTTFVMLMVD-SSTTTLSLSHMWN---KMPlLTTAILTI--MLS 250
Cdd:PRK12561 281 YSSVSHMGFvLLGIAAFTDlgiSGAMLQMISHGLIAAALFFLTGVTyERTHTLSIPNMGGlakVMP-KTFALFTAssMAS 359
|
250 260 270
....*....|....*....|....*....|....*...
gi 146289862 251 LgGLPPLSGFTPKWMIIQEMTKNDSMiTPTIMAVMTLL 288
Cdd:PRK12561 360 L-ALPGMSGFVSELTVFLGITSSDVY-SSTFRTITILL 395
|
|
|