|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.49e-165 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 465.45 E-value: 1.49e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1462331552 321 TNMAITTFITLSTMLLPLSPMLFTIP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.82e-141 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 403.03 E-value: 4.82e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSlNPTLLTMMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQT-NK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLpST 319
|
330 340
....*....|....*....|....*.
gi 1462331552 320 STNMAITTFITLSTMLLPLSPMLFTI 345
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.78e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 393.13 E-value: 4.78e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 1462331552 321 TNMAITTFITLSTMLLPLSPMLFTI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.51e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 363.01 E-value: 3.51e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQTNKS 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*.
gi 1462331552 321 TNMA-ITTFITLSTMLLPLSPMLFTI 345
Cdd:MTH00105 321 KPMTlLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.29e-101 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 303.04 E-value: 1.29e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1462331552 321 TNMAITTFITLSTMLLPLSPMLFTIP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
6.04e-87 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 265.64 E-value: 6.04e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPNSINYMKQWQTNKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 1462331552 321 TNMAITTFITLSTMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.18e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 207.37 E-value: 2.18e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 1 MNPQAKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 tgqwdITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTspsLNPTLLTMMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 241 TAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCAtITLPPNSINYMKQWQTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 1462331552 321 tNMAITTFITLSTMLLPLSPMLFTI 345
Cdd:MTH00160 312 -SLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-336 |
6.48e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 182.39 E-value: 6.48e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 5 AKLLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 85 DITqlthptscLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPttLFLLTSPSLNPTLLT---MMAIAS 161
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYllcVISVLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 162 TALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTiKTLKLTTVSTAWTKIPPLT 241
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 242 AILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATItlppnSINYMKQWQTNKST 321
Cdd:MTH00144 234 LSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL-----SSSKSKKSNSSKVL 308
|
330
....*....|....*
gi 1462331552 322 NMAITTFITLSTMLL 336
Cdd:MTH00144 309 NSSIISLNLLGGLLF 323
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-337 |
7.77e-50 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 169.58 E-value: 7.77e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 7 LLSIASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSmtnawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 87 TQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIASTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 167 WAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPLTAILML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 247 MLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYcATITLPPNSINYmkQWQTNKSTNMAIT 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSSL--KSAPYEPKTKILI 319
|
330
....*....|.
gi 1462331552 327 TFITLSTMLLP 337
Cdd:MTH00011 320 SMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-298 |
1.21e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.60 E-value: 1.21e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 11 ASLFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 91 HPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPttLFLLTSPSLNPTLLTMMAIASTALGGWAGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 171 NQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTKIPPLTAILMLMLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1462331552 251 LAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
15-298 |
4.37e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 133.32 E-value: 4.37e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAMAWTGLEINTLAILPLIS-KSHHPRAIEATTKYFLVQAAASALLLF-SSMTNAWhTGQWDITQLTHP 92
Cdd:COG1007 113 LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 93 TS------------CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLK----FPPTTLFLLTSPSLNP---TL 153
Cdd:COG1007 192 LAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 154 LTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTL--ITFYL--YCLMTIPIFLTLNTIKTLKLTT 229
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1462331552 230 VSTA-----WTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAY 298
Cdd:COG1007 352 EEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
15-296 |
6.06e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 121.85 E-value: 6.06e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAMAWTGLEINTLAILPLIS-KSHHPRAIEATTKYFLVQAAASALLL--------------FSSMTNAW 79
Cdd:PRK05777 114 LGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKAL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 80 HTGQWDITQLThpTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLK---FPPTT-LFLLTSPSLNPT--- 152
Cdd:PRK05777 194 ADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqq 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 153 LLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTL--ITFYL--YCLMTIPIF--LTLNTIKTLK 226
Cdd:PRK05777 272 VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1462331552 227 LTTVST----AWTKiPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK05777 352 AESISDfaglSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
1.34e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.28 E-value: 1.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAMAWTGLEINTLAILPLI-SKSHHPRAIEATTKYFLVQAAASALLLFS-------------SMTNAWH 80
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 81 TGQWDITQLTHPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFppTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKL--GIFSILVSIGLNVNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWMTIIL----IYNPKLTLITFYLYCLMTIPIF---LTLNTIKTLkLTTVSTA 233
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFSGL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331552 234 WTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.78e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 108.50 E-value: 2.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 14 FLGTTITISSNHWAMAWTGLEINTLAILPLIS-KSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 93 TSC------------LLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLK----FPPTTLFLLTSPSLNPT---L 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifAVFLRLFLYILFGFSEAwqiF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 154 LTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTL--ITFYL--YCLMTIPIFLTLNTIKTLKLTT 229
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1462331552 230 VST-----AWTKIPPLTAILM-LMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYisdfaGLFKTNPILAILIlIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
15-337 |
3.93e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 108.18 E-value: 3.93e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAMAWTGLEINTLAILPLIS-KSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDI----TQL 89
Cdd:MTH00199 108 LGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSIL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 90 THPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTmmAIASTALGGWAG 169
Cdd:MTH00199 188 TGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAIGA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 170 LNQTQTRKILAFSSITHLGWMTIILIYNP----KLTLITFYLYCLMTIPIF---LTLNTIKTLkLTTVSTAWTKIPPLTA 242
Cdd:MTH00199 266 LNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVIAL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 243 ILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYcaTITLPPNS--------INYMKQ 314
Cdd:MTH00199 345 TLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ--IIYFQADYsiliwqkvLKKEER 422
|
330 340
....*....|....*....|...
gi 1462331552 315 WQTNKSTNMAITTFITLSTMLLP 337
Cdd:MTH00199 423 LDLSKSILIGVTFFIILFLMISP 445
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.53e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 103.93 E-value: 1.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 23 SNHWAMAWTGLEINTLAILPLI-SKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 91 HPTSCLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLK----FPPTTLFLLTSPSLN--PTLLTMMAIASTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVkaggYGLIRRSLLYLPSSPfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 165 GGWAGLNQTQTRKILAFSSITHLGWMTIIL----IYNPKLTLITFYLYCLMTIPIFL-----TLNTIKTLKLTTVSTAWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1462331552 236 KIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
30-296 |
1.46e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.05 E-value: 1.46e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 30 WTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQLTH----------PTSCLLLT 99
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaeldpgllLAAFALLL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 100 TAISIKLGLVPFHFWFPE-----------VLQGTSLTTGL--LLATVLKFPPTTLFLLTSPslnptLLTMMAIASTALGG 166
Cdd:COG0651 213 VGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALFLGT-----LLLVLGLLTMLVGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 167 WAGLNQTQTRKILAFSSITHLGWMTI-ILIYNPKLTLITFYLY---CLMTIPIFLT----LNTIKTLKLTTVSTAWTKIP 238
Cdd:COG0651 288 LGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFLAagaiERATGTRDLDKLGGLGKRMP 367
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1462331552 239 PLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:COG0651 368 LTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
2.67e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 86.07 E-value: 2.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAI---------EATTKYFLVQAAASALLLFSSMTNAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 84 --WDITQLTHPTS----------CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFppTTLFLLTSPSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 152 TLLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIIL-------IYNPKLTLITFYLYCLMTIPIFLTLNTIKT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLEEFGT 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 225 L------------------KLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLS 286
Cdd:MTH00198 437 RtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 1462331552 287 LLGL-------FFYLRL 296
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
8.16e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.12 E-value: 8.16e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 51 RAIEATTKYFLVQAAASALLL--FSSM--TNAWHTGQWDI------TQLTHPTSCLL----LTTAISIKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 117 EVLQG-----------TSLTTGLLLATvlkfpptTLFLLTSPSLNP---TLLTMMAIASTALGGWAGLNQTQTRKILAFS 182
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALAT-------RIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYS 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 183 SITHLGWMTIILI----YNPKLTLITFylyclMTIPIFLTLNTIKTLKLTTVSTA----------WTKIPPLTAILMLML 248
Cdd:CHL00049 312 SIGQIGYVIIGIIvgdsNDGYASMITY-----MLFYIFMNLGTFACIVLFGLRTGtdnirdyaglYTKDPFLALSLALCL 386
|
250
....*....|....*
gi 1462331552 249 LSLAGLPPLTGFLPK 263
Cdd:CHL00049 387 LSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.05e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.62 E-value: 1.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 50 PRAIEATTKYFLVQAAASALLLF-SSMTNAWHTGQwdiTQL--------THPTSCLLLT-----TAISIKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 116 PEVLQGT-----------SLTTGLLLATVLKfppTTLFLLTSPSLNpTLLTMMAIASTALGGWAGLNQTQTRKILAFSSI 184
Cdd:PRK02504 234 PDVYEGSptpvvaflsvgSKAAGFALAIRLL---VTAFPSFDEQWK-LLFTALAILSMVLGNVVALAQTSMKRMLAYSSI 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 185 THLGWMTIILIYNPK--LTLITFYL--YCLMTIPIF--LTLNTIKTL--KLTTVSTAWTKIPPLTAILMLMLLSLAGLPP 256
Cdd:PRK02504 310 GQAGFVMIGLVAGTEagYASMVFYLlaYLFMNLGAFacVILFSLRTGtdQISDYAGLYQKDPLLTLGLSLCLLSLGGIPP 389
|
....*..
gi 1462331552 257 LTGFLPK 263
Cdd:PRK02504 390 LAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
3.05e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.05 E-value: 3.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 33 LEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFS-SMTNAwHTGQWDITQLTH--PTSCLLLT------TAIS 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 104 IKLGLVPFHFWFPEVLQGTS-LTTGLLLATVLKFPPTTLFLLT----------SPSLNpTLLTMMAIASTALGGWAGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKVAVYALIRIYftvfggdfrfALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 173 TQTRKILAFSSITHLGWMTIILIYNPKLTLI--TFYL--YCLMTIPIFLTLNTI----KTLKLTTVSTAWTKIPPLTAIL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331552 245 MLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCATITLPPN 307
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
3.18e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 57.78 E-value: 3.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 49 HPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQW--DITQLTH---PTS-----CLLLTTAISIKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 119 LQGTSLTTGLLLATVLK-----------FPpttLFLLTSPSLNPTLLTMmAIASTALGGWAGLNQTQTRKILAFSSITHL 187
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 188 GWMTI-ILIYNPK-LTLITFYL--YCLMTIPIFLTLNTI----KTLKLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTG 259
Cdd:COG1008 312 GFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
250 260 270
....*....|....*....|....*....|...
gi 1462331552 260 FLPKWLIIQELTKqemttTATIIALLSLLGLFF 292
Cdd:COG1008 392 FVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-284 |
8.28e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 53.77 E-value: 8.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 96 LLLTTAISiKLGLVPFHFWFPEVLQGTSLTTGLLLAT---------VLKFPPTtlfLLTSPSLNPTLLTMmAIASTALGG 166
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAamvkagiylVARLAPG---FADVPVWRPTVLVL-GLATMLLGG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 167 WAGLNQTQTRKILAFSSITHLGWMTIIL-IYNPKLTLITFYLYC---LMTIPIFLTLNTIK----TLKLTTVSTAWTKIP 238
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGIIDhstgTRDIRKLSGLGRRQP 362
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1462331552 239 PLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIAL 284
Cdd:PRK12644 363 VLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.15e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 33 LEINTLAILPLIS-KSHHPRAIEATTKYFLVQAAASALLLFS---------SMTNAWHTGQWDITQLTHPTSCL-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 102 ISIKLGLVPFHFWFPEVLQG--TSLTTGLLLATVLKFPPT--TLFLLTSPSLNPT----LLTMMAIASTALGGWAGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 174 QTRKILAFSSITHLGWM------TIILIYNPKLTLITF----------YLYCLMTIPIFLT----LNTIKTLKLTTVSTA 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEialaggiyhiVNHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|...
gi 1462331552 234 WTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
1.65e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 52.63 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 50 PRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQW----DITQLTHPTSC-----LLLTTAISIKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 120 QGTSLTTGLLLATVLKFPPTTLFLLTSPsLNP-------TLLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 193 ILIYNPKLTLITFYLYC----LMTIPIFLTLNTI----KTLKLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....*...
gi 1462331552 265 LIIQELTKqemttTATIIALLSLLGLFF 292
Cdd:TIGR01972 391 LILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
1.87e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.61 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 109 VPFHFWFPEVLQG-TSLTTGLLLATVLKfppTTLFLLTSpsLNP---------TLLTMMAIASTALGGWAGLNQTQTRKI 178
Cdd:PRK12647 212 FPFHFWLPNAMEApTPVSAYLHSATMVK---AGIYLLAR--LNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 179 LAFSSITHLGWMTIILIYNPKLTLITFYLY----CLMTIPIFLTLNTIK----TLKLTTVSTAWTKIPPLTAILMLMLLS 250
Cdd:PRK12647 287 LAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALS 366
|
170 180 190
....*....|....*....|....*....|....*....
gi 1462331552 251 LAGLPPLTGFLPKWLIIQELTkqEMTTTATIIALLSLLG 289
Cdd:PRK12647 367 MAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
8.15e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 45.33 E-value: 8.15e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1462331552 291 FFYLRLAYCATITLPPNSINYMKQWQTNKSTNMA-ITTFITLSTMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
3.05e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 48.84 E-value: 3.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 34 EINTLAILPLISKSHHpRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDIT-------QLTHPTSCLLLTTAISI-- 104
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLAfg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 105 --KLGLVPFHFWFPE-----------VLQGTSLTTG--LLLATVLKFPPTTLFL-----LTSPSLNPTLLTMMAIaSTAL 164
Cdd:PRK08668 207 vaKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGayGFLLVLYVLPGTKLFSefgtyRGVPLFNYILAWLGNI-SIIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 165 GGWAGLNQTQTRKILAFSSITHLGWmtiILIYNPKLTLITF-------YLYCLMTIPIFLTLNTI----KTLKLTTVSTA 233
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAViyrtGTTKISEMGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331552 234 WTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
3.42e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 48.61 E-value: 3.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 48 HHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQL-----THPTSCLLLTTAISI------KLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 117 EVLQG-----------TSLTTGLLLatVLKFPPttLFLLTspslnPTLLTMMAI--ASTAL-GGWAGLNQTQTRKILAFS 182
Cdd:COG1009 236 DAMEGptpvsallhaaTMVKAGVYL--LARLSP--LFALS-----PVWLTVVAIigAITALfAALIALAQTDIKRVLAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 183 SITHLGWMTIILiynpKLTLITFYLYCLMTIPIFLTL---------NTIKTLKLTTVSTAWTKIpPLTAILMLM-LLSLA 252
Cdd:COG1009 307 TVSQLGYMFLAL----GVGAYVAALFHLLTHAFFKALlflgagsviHATGTRDIRKMGGLRKKM-PITAITFLIgALSLA 381
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1462331552 253 GLPPLTGFLPKWLIIQE-LTKQEMTTTATIIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 382 GIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
7.37e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.42 E-value: 7.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 96 LLLTTAISIKLGLVPFHFWFPEV-----------LQGTSltTGLLLATVLKFPPTTL---FLLTSPSLNPTLLTMMAIAs 161
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAyseapsfisvfFSGTS--TKVMIYLIIRIVYDVFkanFVFTTLPFNNVFMILAALA- 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 162 TALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLY----CLMTIPIFLTLNTIK----TLKLTTVSTA 233
Cdd:PRK12662 290 IVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNL 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1462331552 234 WTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK12662 370 WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-298 |
1.17e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.87 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 92 PTSCLLLTTAISIKLGLVPFhFWFPEVLQGTSLTTGLLLATVLK-------FPPTTLFLLTSPSLNPTLLTMMAIASTAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 165 GGWAGLNQTQTRKILAFSSITHLGWMTI-ILIYNPK-LTLITFYLYCLMTIP--IFLTLNTIKTL----KLTTVSTAWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLgLALGTPAgINGAIFYLVHDMVVKtaLFLIAGSLVRLtgyrSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331552 237 IPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTTTATIIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
5.28e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.03 E-value: 5.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 29 AWtglEINTLAILPLISKSHhPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQLTHPTS-----------CLL 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 98 LTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSL--NPT---LLTMMAIASTALGGWAGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 173 TQTRKILAFSSITHLGWM-TIILIYNP-KLT--LITFYLYCLMTIPIFLTLNTIK----TLKLTTVSTAWTKIPPLTAIL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 245 MLMLLSLAGLPPLTGFLPKWLIIQELTKQEMtTTATIIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
6.75e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.55 E-value: 6.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 103 SIKLGLVPFHFWFPE----------VLQGTSLTTGLLLATVLKFpptTLFLLTSPSLNPTLLTMMAIASTALGGWAGLNQ 172
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 173 TQTRKILAFSSITHLGWMTI-ILIYNPK-LTLITFYLYCLMTIP--IFLTLNTI----KTLKLTTVSTAWTKIPPLTAIL 244
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLIHDMIVKaaLFLLIGIMikitGTTDLKKMGGLIKRYPVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1462331552 245 MLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-192 |
1.64e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 43.20 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 13 LFLGTTITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAA------SALLLFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 87 TQLTHPT----------SCLLLTTAISIKLGLVPFHFWFPEV-LQGTSLTTGLLLATVLKFPPTTLFLLTS-------PS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1462331552 149 LNPTLLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTI 192
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
2.29e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 42.76 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 95 CLLLTTAISIKLGLVPFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAIA-----STALGGWAG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 170 LNQTQTRKILAFSSITHLGWMTIILiynpKLTLITFYLYCLMTIPIFLTLntiktLKLTTVST--------------AWT 235
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVAC----GLSHYSISLFHLMNHAFFKAL-----LFLSAGSVihalsdeqdmrkmgGLI 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331552 236 KIPPLTAILMLM-LLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 364 SFLPLTYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
3.03e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 42.64 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 92 PTSCLLLTTAI--SIKLGLvpfHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLTSPSLNPTLLTMMAI----ASTAL- 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgALTAFf 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 165 GGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLMTIPIFLTLNTIKTLKLTTVSTAWTK-------- 236
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVDEQDMRkmgglihs 382
|
170 180 190
....*....|....*....|....*....|..
gi 1462331552 237 IPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.01e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 40.71 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 33 LEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQLTH--PTSCLLLTTAISIKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 111 FHFWFPEVLQGTSLTTGLLLA-TVLK---FPPTTLFLLtSPSLNPtLLTMMAIASTALGGWAGLNQTQTRKILAFSSITH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSgVVVKagvFPLVRCALD-VPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 187 LGWMTIILIYNPKLTLItfylYCLMTIPIFLTLNTIKTLKLT----TVSTAWTKIPpltaiLMLMLLSLAGLPPLTGFLP 262
Cdd:PRK07234 281 LGFILAAPLVGGLYALA----HGLVKSTLFLCAGALPSRNFTelisQMLGIGKWIP-----LTMASFSIAGFPLLAGFVS 351
|
....*....
gi 1462331552 263 KWLIIQELT 271
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
1.09e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 40.84 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 55 ATTKYFLVQAAASALLLFSSMTNAWHTG-------QWDITQLTHPTSCLLLT---TAISIKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGassfdyePLRSHTLPLSTQLLLLApilVGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1462331552 125 TTGLLLATVLKFPPT--------TLFLLTSPSLNPTLLTMMAIaSTALGGWAGLNQTQTRKILAFSSITHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLLKLGTygllrfgvGLFPEAWVYLAPWLATWAVV-SVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.56e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 55 ATTKYFLVQAAASALLLFSSMTNAWHTGQWD------ITQ-LTHPTSCLLLTTAI---SIKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 125 TTGLLLATVLKFPPT--------TLFLLTSPSLNPTLLTMMAIaSTALGGWAGLNQTQTRKILAFSSITHLGWMTIILIY 196
Cdd:PRK07363 238 AVAILLGGVLAKLGTygllrfglQLFPQTWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 197 NPKLT------------LITFYLYCLMTIpIFLTLNTIKTLKLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTGFLPKW 264
Cdd:PRK07363 317 GTQLSllgavaqmishgLILALLFHLVGI-VERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEF 395
|
....
gi 1462331552 265 LIIQ 268
Cdd:PRK07363 396 IVFQ 399
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-345 |
2.10e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.75 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 82 GQWDITQLTHPTSCLLLTTAISI----KLGLVPFHFWFPE-----------VLQGTSLTTGLLLatVLKFPPttlFLLTS 146
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAamaaptpvsalVHSSTLVTAGVFL--LIRFYP---FLSST 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 147 PSLNPTLLtMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIIL-IYNPKLTLITFYLYCLMTIPIFLTLNTI--- 222
Cdd:MTH00207 240 YWFNPALL-LTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMPKLALFHLITHALFKALLFVCAGSLihs 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 223 --KTLKLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAYCA 300
Cdd:MTH00207 319 hhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1462331552 301 TITLPPNSINYMKQWQTNKS--------TNMAITTFITLS-TMLLPLSPMLFTI 345
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSlttpmlllTLGAITSGSALNwWLPTPQEEPILPL 452
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
12-288 |
2.42e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 39.53 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 12 SLFLGTT-ITISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYF---------------LVQAAASALLLFSSM 75
Cdd:PRK06458 115 QLFLFTMlLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIiicsvgvafalfgtiLVYANAATVMGDGEM 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 76 TNAW-----HTGQWDITQLTHPTSCLLLttAISIKLGLVPFHFWFPE-----------VLQGTSLTTGLLLatVLKFppt 139
Cdd:PRK06458 195 AILWtellkHASLLDPTLMKLAFVFLLI--GFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--VLRY--- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 140 tlFLLTSPSLNP----TLLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYCLM---- 211
Cdd:PRK06458 268 --YILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhslt 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 212 TIPIFLTLNTIKTLKLTTVSTA---WTKIPPLTAI-LMLMLLSLAGLPPLTGFLPKWLIIQElTKQEMTTTATIIALLSL 287
Cdd:PRK06458 346 KSAIFFASGNVLQKYGTRDINVirgLLKVSPLTGWgLMLGALAIAGMPPFGVFISEFLILTA-GLARGPLLIAILLLLLL 424
|
.
gi 1462331552 288 L 288
Cdd:PRK06458 425 T 425
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-284 |
2.98e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.41 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 12 SLFLGTTITISSNHWAMaWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMT---NAWHTGQW-DIT 87
Cdd:PRK06589 125 TILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvSGG 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 88 QLTHPTSCLLLTTAIS--IKLGLVPFHFWFPEVLQGTSLTTGLLLATVL----KFPPTTLFLLTSPSLNPTLLTMM---- 157
Cdd:PRK06589 204 LFSKNQSIILLLMFIYgiAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfnwl 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 158 ---AIASTALGGWAGLNQTQTRKILAFSSITHLGW--MTIILIYNPKLTLITFYLYC--LMTIPIFLTLNTIKTLKLTTV 230
Cdd:PRK06589 284 ifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKKEDQ 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1462331552 231 STAWTKIPPLTAILMLML----LSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIAL 284
Cdd:PRK06589 364 VDKLHGTSKSFPLISFIIsissLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-296 |
3.52e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.99 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 21 ISSNHWAMAWTGLEINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQ----LTHPTSCL 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 97 LLTTAIS-------IKLGLVPFHFWFPEVLQGTSLTTGLLLA---------TVLKFPPTTLFLLTSPSLNPTLLTMMAIA 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLAgistiigiyIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 161 STALGGWAGLNQTQTRKILAFSSITHLGWmtIILIYNPKLtlitfylyCLMTIPIFLTLNTIKTLKLTTVST--AWTKIP 238
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGY--VFLLYVTEN--------GIIILPSLLLADSINKIALFLIDAynESYKRE 361
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1462331552 239 PLTAILMLMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRL 296
Cdd:PRK06591 362 PNKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-192 |
4.18e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 38.86 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 55 ATTKYFLVQAAASALLLFSSMTNAWHTGQ--WDITQLTH---PTSCLLLT-----TAISIKLGLVPFHFWFPEVLQGTSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1462331552 125 TTGLLLATVL-KFPPTTLFLLTSPSLNPT------LLTMMAIASTALGGWAGLNQTQTRKILAFSSITHLGWMTI 192
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
4.24e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 38.94 E-value: 4.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 59 YFLVQAAASALLLFSSMTNAWHTGQWDITQLTHPT-----SCLLLTTAISIKLGLVPFHFWFPEVLQG-----TSLTTGL 128
Cdd:PRK08667 167 YFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPAspsnvSALMSGV 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 129 LLATVLKFPPTTLFLLTSPSLNPTLLTMMAIASTA-LGGWAGLNQTQTRKILAFSSITHLG--------WMTIILIYNPK 199
Cdd:PRK08667 247 MLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISAlLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLDT 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 200 LTLITFYLYCLMTIP-------IFLTLNTI----KTLKLTTVSTAWTKIPPLTAILMLMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK08667 327 LALLALGGALFHSLNhalfkslLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
250 260
....*....|....*....|....
gi 1462331552 269 ELTKQEMTTTATI-IALLSLLGLF 291
Cdd:PRK08667 407 SFFQSFSVADPLIkILLFSVLAIF 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-195 |
4.26e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 38.75 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 101 AISIKLGLVPFHFWFPEVLQGTSLTTGLLLATV-LKFPPTTLFLLTSP-------SLNPTLLTmMAIASTALGGWAGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCRQ 317
|
90 100
....*....|....*....|...
gi 1462331552 173 TQTRKILAFSSITHLGWMTIILI 195
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLV 340
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
5.62e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 38.47 E-value: 5.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 34 EINTLAILPLISKSHHPRAIEATTKYFLVQAAASALLLFSSMTNAWHTGQWDITQ-----LTHPTSCLLLTTAISIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 109 V------PFHFWFPEVLQGTSLTTGLLLATVLKFPPTTLFLLT---------SPSLNpTLLTMMAIASTALGGWAGLNQT 173
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIfklfgglsyFPSAQ-GVLIALSVLAMVFGVVMALLQT 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 174 QTRKILAFSSITHLGWMTIILIYNPKLTLITFYLYC----LMTIPIFLTLNTI----KTLKLTTVSTAWTKIPPLTAILM 245
Cdd:PRK06277 289 DYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1462331552 246 LMLLSLAGLPPLTGFLPKWLIIQELTKQEMTTTATIIALLSLLGLFFYLRLAY 298
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
6.06e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 38.26 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 50 PRAIEATTKYFLVQAAASALLLFSSMTNAWH----TGQWDITQLTHPTSCLLLTT--------AISIKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 118 V-LQGTSLTTGLLLATVLK----------FPpttLFLLTSPSLNPTLLTMmAIASTALGGWAGLNQTQTRKILAFSSITH 186
Cdd:PRK05846 237 AhVQAPTAGSVLLAGILLKmgaygllrfsLP---LFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 187 LGWMTI-ILIYNPK------------------LTLITFYLYCLMtipifltlntiKTLKLTTVSTAWTKIPPLTAILMLM 247
Cdd:PRK05846 313 MGFVTLgIFAGNQLgiqgaifqmishglssaaLFLLVGVLYDRL-----------HTRDIADYGGLAKVMPVLAAFFLFF 381
|
250 260
....*....|....*....|
gi 1462331552 248 LLSLAGLPPLTGFLPKWLII 267
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLIL 401
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
7.25e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 38.23 E-value: 7.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 15 LGTTITISSNHWAM---AWTGLEINTLAILPLISKSHHPRAIeattkyFLVQAAASALLLFSSMTNAWH-TGQWDITQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 91 HPTSCLLLTTAISIKLGLVPFHF--WFPE-----------VLQGTSLTTGLLLatVLKFpptTLFLLTSPSLNPTLLTMM 157
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIahgnapsnfsaILSATMTLMGVYG--ILKM---TILTQTIPIGYFGLTILA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1462331552 158 AIASTAL-GGWAGLNQTQTRKILAFSSITHLGWM-----TIILIYNPKLTLITFYLYCLMTIPIFLTLN------TIKTL 225
Cdd:PRK06459 232 IGAFSILfGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAktglflSSGLQ 311
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1462331552 226 KLTTVSTAWTKIPPLTAI-LMLMLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 312 EKQSITYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| |
