|
Name |
Accession |
Description |
Interval |
E-value |
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
18-416 |
3.32e-155 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 444.19 E-value: 3.32e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 18 LELATQLGKKLGrhKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVVDINREGKTITLg 97
Cdd:COG1252 14 LEAARRLRKKLG--GDAEVTLIDPNPYHLFQPLLPEVAAGTLSPDDIAIPLRELLRRAGVRFIQGEVTGIDPEARTVTL- 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 98 elrnEKGellvaeRKLPYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANlganGKVNIAIVG 177
Cdd:COG1252 91 ----ADG------RTLSYDYLVIATGSVTNFFGIPGLAEHALPLKTLEDALALRERLLAAFERAERR----RLLTIVVVG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 178 GGATGVELSAELHNAVKQLHSYgyKGLTNEALNVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSADAGGL 257
Cdd:COG1252 157 GGPTGVELAGELAELLRKLLRY--PGIDPDKVRITLVEAGPRILPGLGEKLSEAAEKELEKRGVEVHTGTRVTEVDADGV 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 258 HTKDGEYIEADLMVWAAGIKAPDFMKEIGgLETNRINQLVVEPTLQTTRDADIFAIGDCASCARPEGGFVPPRAQAAHQM 337
Cdd:COG1252 235 TLEDGEEIPADTVIWAAGVKAPPLLADLG-LPTDRRGRVLVDPTLQVPGHPNVFAIGDCAAVPDPDGKPVPKTAQAAVQQ 313
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1460644627 338 ATCALNNILAQMKGKPLKAYTYKDHGSLVSLSNYSTVGSLMGnlmrgsMMVEGRIARFVYISLYRMHQIALHGYFKTGL 416
Cdd:COG1252 314 AKVLAKNIAALLRGKPLKPFRYRDKGCLASLGRGAAVADVGG------LKLSGFLAWLLKRAIHLYFLPGFRGRLRVLL 386
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
30-338 |
1.30e-56 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 188.68 E-value: 1.30e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 30 RHKKAKITLV-DRNHSHLWKPLLHEVATGSLDEGVDAL---SYLAHARNHGFQFQLG-------SVVDINREGKTITLGE 98
Cdd:pfam07992 20 AQLGGKVTLIeDEGTCPYGGCVLSKALLGAAEAPEIASlwaDLYKRKEEVVKKLNNGievllgtEVVSIDPGAKKVVLEE 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 99 LRNEKGEllvaerKLPYDTLVMALGSTSNDFNTPGVKENCIFL-DNPHQARRFHQEMLNLflkysanlgangkvNIAIVG 177
Cdd:pfam07992 100 LVDGDGE------TITYDRLVIATGARPRLPPIPGVELNVGFLvRTLDSAEALRLKLLPK--------------RVVVVG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 178 GGATGVELSAELHNAVKQlhsygykgltnealnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSADAGG- 256
Cdd:pfam07992 160 GGYIGVELAAALAKLGKE---------------VTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVKEIIGDGd 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 257 ---LHTKDGEYIEADLMVWAAGIKAPDFMKEIGGLETNRINQLVVEPTLQTTRDaDIFAIGDCascarpeGGFVPPRAQA 333
Cdd:pfam07992 225 gveVILKDGTEIDADLVVVAIGRRPNTELLEAAGLELDERGGIVVDEYLRTSVP-GIYAAGDC-------RVGGPELAQN 296
|
....*
gi 1460644627 334 AHQMA 338
Cdd:pfam07992 297 AVAQG 301
|
|
| PTZ00318 |
PTZ00318 |
NADH dehydrogenase-like protein; Provisional |
31-401 |
3.64e-47 |
|
NADH dehydrogenase-like protein; Provisional
Pssm-ID: 185553 [Multi-domain] Cd Length: 424 Bit Score: 167.25 E-value: 3.64e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 31 HKKAKITLVD-RNHsHLWKPLLHEVATGSLdEGVDALSYLAHARNH-GFQFQLGSVVDINREGKTITLGELRNEKGELlV 108
Cdd:PTZ00318 31 PKKYNITVISpRNH-MLFTPLLPQTTTGTL-EFRSICEPVRPALAKlPNRYLRAVVYDVDFEEKRVKCGVVSKSNNAN-V 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 109 AERKLPYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKysANLG------ANGKVNIAIVGGGATG 182
Cdd:PTZ00318 108 NTFSVPYDKLVVAHGARPNTFNIPGVEERAFFLKEVNHARGIRKRIVQCIER--ASLPttsveeRKRLLHFVVVGGGPTG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 183 VELSAELHNAVKQLHSYGYKGLTNEAlNVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSADAGGLHTKDG 262
Cdd:PTZ00318 186 VEFAAELADFFRDDVRNLNPELVEEC-KVTVLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTKTAVKEVLDKEVVLKDG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 263 EYIEADLMVWAAGIKAPDFMKEIGGLETNRiNQLVVEPTLQTTRDADIFAIGDCASCarpEGGFVPPRAQAAHQMATCAL 342
Cdd:PTZ00318 265 EVIPTGLVVWSTGVGPGPLTKQLKVDKTSR-GRISVDDHLRVKPIPNVFALGDCAAN---EERPLPTLAQVASQQGVYLA 340
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 343 NNILAQMKGKPL-KAYTYKDHGSLVSLSNYSTVGSLmgnlmrGSMMVEGRIARFVYISLY 401
Cdd:PTZ00318 341 KEFNNELKGKPMsKPFVYRSLGSLAYLGNYSAIVQL------GAFDLSGFKALLFWRSAY 394
|
|
| Nterm_to_SelD |
TIGR03169 |
pyridine nucleotide-disulfide oxidoreductase family protein; Members of this protein family ... |
72-391 |
2.77e-40 |
|
pyridine nucleotide-disulfide oxidoreductase family protein; Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Pssm-ID: 274465 Cd Length: 364 Bit Score: 147.35 E-value: 2.77e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 72 ARNHGFQFQLGSVVDINREGKTITLgelrnEKGellvaeRKLPYDTLVMALGSTSNDFNTPGVKENCI-------FLDNP 144
Cdd:TIGR03169 64 ARFAGARLILDRAIGLDLAAKQVIC-----AGR------PPIAYDVLSIDIGSTPALPDVPGFAEHAIpakplgqFAQRW 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 145 HQarrfhqemlnlflkYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSygykgltneALNVTLVEAGERILPAL 224
Cdd:TIGR03169 133 QR--------------FLERAKPQQPPRIAVIGGGAAGVELALAMAHRLRQLGR---------NAEVTLIDRGNVLLPGH 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 225 PPRISGAAHNELTKLGVRVLTQTMVTSADAGGLHTKDGEYIEADLMVWAAGIKAPDFMKEIGgLETNRINQLVVEPTLQT 304
Cdd:TIGR03169 190 NARVRRRLERALQERGVTLHLGATVAEVTADAVRLEDGQTLPADFTFWATGARPPGWLAESG-LALDEDGFIRVGPTLQS 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 305 TRDADIFAIGDCAScarpeggFVP-PRAQA---AHQMATCALNNILAQMKGKPLKAYT-YKDHGSLVSLSNYSTVGSlmg 379
Cdd:TIGR03169 269 LSHPDIFAAGDCAH-------LVHaPRPKAgvfAVRQAPVLAENLRAALTGGPLRPYRpQSDYLKLISTGDKSAVAS--- 338
|
330
....*....|..
gi 1460644627 380 nlmRGSMMVEGR 391
Cdd:TIGR03169 339 ---RGGLAFSGA 347
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
30-355 |
2.18e-37 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 138.41 E-value: 2.18e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 30 RHKKAKITLVDRNHSH------LWKPLLHEVATgsldegVDALSYLAHA--RNHGFQFQLGS-VVDINREGKTITLgelr 100
Cdd:COG0446 2 LGPDAEITVIEKGPHHsyqpcgLPYYVGGGIKD------PEDLLVRTPEsfERKGIDVRTGTeVTAIDPEAKTVTL---- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 101 nEKGEllvaerKLPYDTLVMALGSTSNDFNTPGVKENCIF-LDNPHQARRFHQEMLNlflkysanlgANGKvNIAIVGGG 179
Cdd:COG0446 72 -RDGE------TLSYDKLVLATGARPRPPPIPGLDLPGVFtLRTLDDADALREALKE----------FKGK-RAVVIGGG 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 180 ATGVELSAELHNAvkqlhsygykGLtnealNVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSADAGG--- 256
Cdd:COG0446 134 PIGLELAEALRKR----------GL-----KVTLVERAPRLLGVLDPEMAALLEEELREHGVELRLGETVVAIDGDDkva 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 257 LHTKDGEYIEADLMVWAAGIkAPDFmkEIG---GLETNRINQLVVEPTLQtTRDADIFAIGDCASCARPEGG--FVPPRA 331
Cdd:COG0446 199 VTLTDGEEIPADLVVVAPGV-RPNT--ELAkdaGLALGERGWIKVDETLQ-TSDPDVYAAGDCAEVPHPVTGktVYIPLA 274
|
330 340
....*....|....*....|....
gi 1460644627 332 QAAHQMATCALNNILaqmkGKPLK 355
Cdd:COG0446 275 SAANKQGRVAAENIL----GGPAP 294
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
48-346 |
1.04e-34 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 132.96 E-value: 1.04e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 48 KPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGS-VVDINREGKTITLgelrnEKGEllvaerKLPYDTLVMALGSTS 126
Cdd:COG1251 42 RPPLSKVLAGETDEEDLLLRPADFYEENGIDLRLGTrVTAIDRAARTVTL-----ADGE------TLPYDKLVLATGSRP 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 127 NDFNTPGV-KENCIFLDNPHQARRFHQEMlnlflkysanlgANGKvNIAIVGGGATGVELSAELHNAvkqlhsyGYKglt 205
Cdd:COG1251 111 RVPPIPGAdLPGVFTLRTLDDADALRAAL------------APGK-RVVVIGGGLIGLEAAAALRKR-------GLE--- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 206 nealnVTLVEAGERILP-ALPPRISGAAHNELTKLGVRVLTQTMVTS----ADAGGLHTKDGEYIEADLMVWAAGIKaP- 279
Cdd:COG1251 168 -----VTVVERAPRLLPrQLDEEAGALLQRLLEALGVEVRLGTGVTEiegdDRVTGVRLADGEELPADLVVVAIGVR-Pn 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 280 -DFMKEIGgLETNR-InqlVVEPTLQTTrDADIFAIGDCASCA-RPEGGFVPPRAQAAHQMATCALNNIL 346
Cdd:COG1251 242 tELARAAG-LAVDRgI---VVDDYLRTS-DPDIYAAGDCAEHPgPVYGRRVLELVAPAYEQARVAAANLA 306
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
173-348 |
1.84e-19 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 90.15 E-value: 1.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVEL-SAelhnavkqLHSYGYKgltnealnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTS 251
Cdd:COG1249 171 LVVIGGGYIGLEFaQI--------FARLGSE--------VTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTS 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 252 ADAGG----LHTKDG---EYIEADLMVWAAGIKApdFMKEIG----GLETNRINQLVVEPTLQTTrDADIFAIGDCAsca 320
Cdd:COG1249 235 VEKTGdgvtVTLEDGggeEAVEADKVLVATGRRP--NTDGLGleaaGVELDERGGIKVDEYLRTS-VPGIYAIGDVT--- 308
|
170 180
....*....|....*....|....*...
gi 1460644627 321 rpeGGfvPPRAQAAHQMATCALNNILAQ 348
Cdd:COG1249 309 ---GG--PQLAHVASAEGRVAAENILGK 331
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
84-348 |
6.44e-19 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 87.66 E-value: 6.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 84 VVDINREGKTITlgelrnekgellVAERKLPYDTLVMALGSTSndFNTPGVKENCIFLDNPHQARRFHQEMLnlflkysa 163
Cdd:PRK04965 81 VTDIDAEAQVVK------------SQGNQWQYDKLVLATGASA--FVPPIPGRELMLTLNSQQEYRAAETQL-------- 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 164 nlgANGKvNIAIVGGGATGVELSAELHNAVKQlhsygykgltnealnVTLVEAGERILPAL-PPRISGAAHNELTKLGVR 242
Cdd:PRK04965 139 ---RDAQ-RVLVVGGGLIGTELAMDLCRAGKA---------------VTLVDNAASLLASLmPPEVSSRLQHRLTEMGVH 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 243 VLTQTMV---TSADAG-GLHTKDGEYIEADLMVWAAGIKAPDFMKEIGGLETNRinQLVVEPTLQTTrDADIFAIGDCAS 318
Cdd:PRK04965 200 LLLKSQLqglEKTDSGiRATLDSGRSIEVDAVIAAAGLRPNTALARRAGLAVNR--GIVVDSYLQTS-APDIYALGDCAE 276
|
250 260 270
....*....|....*....|....*....|
gi 1460644627 319 CarpeGGFVPPRAQAAHQMATCALNNILAQ 348
Cdd:PRK04965 277 I----NGQVLPFLQPIQLSAMALAKNLLGQ 302
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
50-357 |
2.53e-18 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 87.58 E-value: 2.53e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 50 LLHEVATGSLDEGVDALSYLAHARNHGFQFQLG-SVVDINREGKTItlgelrnekgeLLVAERKLPYDTLVMALGSTSND 128
Cdd:TIGR02374 42 LLSSVLQGEADLDDITLNSKDWYEKHGITLYTGeTVIQIDTDQKQV-----------ITDAGRTLSYDKLILATGSYPFI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 129 FNTPGV-KENCifldnpHQARRFH--QEMLNlflkysanlGANGKVNIAIVGGGATGVELSaelhnavkqlhsygyKGLT 205
Cdd:TIGR02374 111 LPIPGAdKKGV------YVFRTIEdlDAIMA---------MAQRFKKAAVIGGGLLGLEAA---------------VGLQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 206 NEALNVTLVEAGERILPALPPRISGAA-HNELTKLGVRVLTQT----MVTSADAGGLHTKDGEYIEADLMVWAAGIKAPD 280
Cdd:TIGR02374 161 NLGMDVSVIHHAPGLMAKQLDQTAGRLlQRELEQKGLTFLLEKdtveIVGATKADRIRFKDGSSLEADLIVMAAGIRPND 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1460644627 281 FMKEIGGLETNRinQLVVEPTLQTTrDADIFAIGDCASCARPEGGFVPPraqaAHQMATCALNNILaqmkGKPLKAY 357
Cdd:TIGR02374 241 ELAVSAGIKVNR--GIIVNDSMQTS-DPDIYAVGECAEHNGRVYGLVAP----LYEQAKVLADHIC----GVECEEY 306
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
84-318 |
1.48e-14 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 75.08 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 84 VVDINREGKTITLGELRNEKgellvaERKLPYDTLVMALGSTSNdfnTPGVKEncIFLDNPHQARRFH--QEMLNLFLKY 161
Cdd:PRK09564 79 VVKVDAKNKTITVKNLKTGS------IFNDTYDKLMIATGARPI---IPPIKN--INLENVYTLKSMEdgLALKELLKDE 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 162 SanlgangKVNIAIVGGGATGVELSAELHNAVKqlhsygykgltnealNVTLVEAGERILP-ALPPRISGAAHNELTKLG 240
Cdd:PRK09564 148 E-------IKNIVIIGAGFIGLEAVEAAKHLGK---------------NVRIIQLEDRILPdSFDKEITDVMEEELRENG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 241 VRVLTQTMVTSADAG----GLHTKDGEYiEADLMVWAAGIK-APDFMKEiGGLETNRINQLVVEPTLQTTrDADIFAIGD 315
Cdd:PRK09564 206 VELHLNEFVKSLIGEdkveGVVTDKGEY-EADVVIVATGVKpNTEFLED-TGLKTLKNGAIIVDEYGETS-IENIYAAGD 282
|
...
gi 1460644627 316 CAS 318
Cdd:PRK09564 283 CAT 285
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
173-315 |
1.08e-11 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 66.32 E-value: 1.08e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVEL-SAelhnavkqlhsygYKGLTNEalnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTS 251
Cdd:PRK06416 175 LVVIGGGYIGVEFaSA-------------YASLGAE---VTIVEALPRILPGEDKEISKLAERALKKRGIKIKTGAKAKK 238
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1460644627 252 ADAGG----LHTKDG---EYIEADLMVWAAGIkAPDfMKEIG----GLETNRiNQLVVEPTLQTTrDADIFAIGD 315
Cdd:PRK06416 239 VEQTDdgvtVTLEDGgkeETLEADYVLVAVGR-RPN-TENLGleelGVKTDR-GFIEVDEQLRTN-VPNIYAIGD 309
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
173-316 |
2.04e-11 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 65.58 E-value: 2.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVEL-SAelhnavkqLHSYGYKgltnealnVTLVEAGERILPALPPRISGAAHNELTKlGVRVLTQTMVTS 251
Cdd:PRK06292 172 LAVIGGGVIGLELgQA--------LSRLGVK--------VTVFERGDRILPLEDPEVSKQAQKILSK-EFKIKLGAKVTS 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1460644627 252 ADAGG-----LHTKDGE--YIEADLMVWAAGIKA--PDFMKEIGGLETNRINQLVVEPTLQTTrDADIFAIGDC 316
Cdd:PRK06292 235 VEKSGdekveELEKGGKteTIEADYVLVATGRRPntDGLGLENTGIELDERGRPVVDEHTQTS-VPGIYAAGDV 307
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
172-256 |
9.24e-11 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 57.60 E-value: 9.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 172 NIAIVGGGATGVELSAELHNAVKQlhsygykgltnealnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTS 251
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSK---------------VTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEA 65
|
....*
gi 1460644627 252 ADAGG 256
Cdd:pfam00070 66 IEGNG 70
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
73-318 |
1.77e-10 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 62.46 E-value: 1.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 73 RNHGFQFQLGSVVdinreGKTITLGELRNEkgellvaerklpYDTLVMALGST-SNDFNTPGvkENcifLDNPHQArrfh 151
Cdd:COG0493 182 EALGVEFRTNVEV-----GKDITLDELLEE------------FDAVFLATGAGkPRDLGIPG--ED---LKGVHSA---- 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 152 qemlNLFLKySANLG-------ANGKvNIAIVGGGATGVelsaelhNAVKQLHSYGykgltneALNVTLV---------- 214
Cdd:COG0493 236 ----MDFLT-AVNLGeapdtilAVGK-RVVVIGGGNTAM-------DCARTALRLG-------AESVTIVyrrtreempa 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 215 ----------EAGERILPALPPRISGAAHNELTklGVRVLTQTMVTSADAGGLHTKDGE----YIEADLMVWAAGIKA-P 279
Cdd:COG0493 296 skeeveealeEGVEFLFLVAPVEIIGDENGRVT--GLECVRMELGEPDESGRRRPVPIEgsefTLPADLVILAIGQTPdP 373
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1460644627 280 DFMKEIGGLETNRINQLVVEP-TLQTTRDaDIFAIGDCAS 318
Cdd:COG0493 374 SGLEEELGLELDKRGTIVVDEeTYQTSLP-GVFAGGDAVR 412
|
|
| PRK14989 |
PRK14989 |
nitrite reductase subunit NirD; Provisional |
75-348 |
2.56e-10 |
|
nitrite reductase subunit NirD; Provisional
Pssm-ID: 184951 [Multi-domain] Cd Length: 847 Bit Score: 62.44 E-value: 2.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 75 HGFQFQLGS-VVDINREGKTItlgelRNEKGellvaeRKLPYDTLVMALGSTSNdfnTPGVKenciflDNPHQARRFHQE 153
Cdd:PRK14989 72 HGIKVLVGErAITINRQEKVI-----HSSAG------RTVFYDKLIMATGSYPW---IPPIK------GSETQDCFVYRT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 154 MLNL-FLKYSANLGANGkvniAIVGGGATGVELSAelhnAVKQLhsygykGLTNEALNVTLVEAGERilpaLPPRISGAA 232
Cdd:PRK14989 132 IEDLnAIEACARRSKRG----AVVGGGLLGLEAAG----ALKNL------GVETHVIEFAPMLMAEQ----LDQMGGEQL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 233 HNELTKLGVRVLTQTMVTSADAGG------LHTKDGEYIEADLMVWAAGIKAPDFMKEIGGLETNRINQLVVEPTLQTTr 306
Cdd:PRK14989 194 RRKIESMGVRVHTSKNTLEIVQEGvearktMRFADGSELEVDFIVFSTGIRPQDKLATQCGLAVAPRGGIVINDSCQTS- 272
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1460644627 307 DADIFAIGDCASCARPEGGFVPPraqaAHQMATCALNNILAQ 348
Cdd:PRK14989 273 DPDIYAIGECASWNNRVFGLVAP----GYKMAQVAVDHLLGS 310
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
78-324 |
3.10e-10 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 61.48 E-value: 3.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 78 QFQLGSVVDInREGKTI-TLGelRNEKGELLVAERKLPYDTLVMALGSTSNDFNT-PGVKENCIFLDNPHQARRFHQEMl 155
Cdd:PRK09754 66 NWWQENNVHL-HSGVTIkTLG--RDTRELVLTNGESWHWDQLFIATGAAARPLPLlDALGERCFTLRHAGDAARLREVL- 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 156 nlflkysanlgANGKvNIAIVGGGATGVELSAElhnavkqlhsygykgLTNEALNVTLVEAGERIL-PALPPRISGAAHN 234
Cdd:PRK09754 142 -----------QPER-SVVIVGAGTIGLELAAS---------------ATQRRCKVTVIELAATVMgRNAPPPVQRYLLQ 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 235 ELTKLGVRVLTQTMVTSADAGG---LHTKDGEYIEADLMVWAAGIKAPDFMKEIGGLETNriNQLVVEPTLQTTrDADIF 311
Cdd:PRK09754 195 RHQQAGVRILLNNAIEHVVDGEkveLTLQSGETLQADVVIYGIGISANDQLAREANLDTA--NGIVIDEACRTC-DPAIF 271
|
250
....*....|...
gi 1460644627 312 AIGDCASCARPEG 324
Cdd:PRK09754 272 AGGDVAITRLDNG 284
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
173-316 |
2.79e-08 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 55.55 E-value: 2.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVELSAELHnavkqlhsygykGLTNEalnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSA 252
Cdd:PRK06116 170 VAVVGAGYIAVEFAGVLN------------GLGSE---THLFVRGDAPLRGFDPDIRETLVEEMEKKGIRLHTNAVPKAV 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1460644627 253 DAGG-----LHTKDGEYIEADLMVWAAGiKAP---DFMKEIGGLETNRINQLVVEpTLQTTRDADIFAIGDC 316
Cdd:PRK06116 235 EKNAdgsltLTLEDGETLTVDCLIWAIG-REPntdGLGLENAGVKLNEKGYIIVD-EYQNTNVPGIYAVGDV 304
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
173-315 |
3.12e-07 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 52.47 E-value: 3.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVElsaelhnavkqlhsY-------GYKgltnealnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLT 245
Cdd:PRK05249 178 LIIYGAGVIGCE--------------YasifaalGVK--------VTLINTRDRLLSFLDDEISDALSYHLRDSGVTIRH 235
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1460644627 246 QTMVTSADAGG----LHTKDGEYIEADLMVWAAG-IKAPDFMK-EIGGLETNRINQLVVEPTLQTTRDaDIFAIGD 315
Cdd:PRK05249 236 NEEVEKVEGGDdgviVHLKSGKKIKADCLLYANGrTGNTDGLNlENAGLEADSRGQLKVNENYQTAVP-HIYAVGD 310
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
173-316 |
2.87e-06 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 49.43 E-value: 2.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVELSaelhnavkqlhsYGYKGLTNEalnVTLVEAGERILPALPPRISGAAHNELTKLGVRVLTQTMVTSA 252
Cdd:PRK06370 174 LVIIGGGYIGLEFA------------QMFRRFGSE---VTVIERGPRLLPREDEDVAAAVREILEREGIDVRLNAECIRV 238
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1460644627 253 --DAGGL-----HTKDGEYIEADLMVWAAGiKAP---DFMKEIGGLETNRINQLVVEPTLQTTRDaDIFAIGDC 316
Cdd:PRK06370 239 erDGDGIavgldCNGGAPEITGSHILVAVG-RVPntdDLGLEAAGVETDARGYIKVDDQLRTTNP-GIYAAGDC 310
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
70-318 |
1.50e-05 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 46.65 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 70 AHARNHGFQFQLGSVVDINREGKTITLgelRNEKGELLVAerklpyDTLVMALGSTSNDFNTPGVKE-------NCIFLD 142
Cdd:COG0492 65 EQAERFGAEILLEEVTSVDKDDGPFRV---TTDDGTEYEA------KAVIIATGAGPRKLGLPGEEEfegrgvsYCATCD 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 143 NPhqarrfhqemlnlFLKysanlganGKvNIAIVGGGATGVELSAElhnavkqlhsygykgLTNEALNVTLVEAGERIlp 222
Cdd:COG0492 136 GF-------------FFR--------GK-DVVVVGGGDSALEEALY---------------LTKFASKVTLIHRRDEL-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 223 alpprisGAAHNELTKL----GVRVLTQTMVTSADAGGL-------HTKDGE--YIEADLMVWAAGIKAP-DFMKEIgGL 288
Cdd:COG0492 177 -------RASKILVERLranpKIEVLWNTEVTEIEGDGRvegvtlkNVKTGEekELEVDGVFVAIGLKPNtELLKGL-GL 248
|
250 260 270
....*....|....*....|....*....|
gi 1460644627 289 ETNRINQLVVEPTLQTTRDAdIFAIGDCAS 318
Cdd:COG0492 249 ELDEDGYIVVDEDMETSVPG-VFAAGDVRD 277
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
240-321 |
3.39e-04 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 42.94 E-value: 3.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 240 GVRVLTQTMVTSADAGGLHTKDGEY--IEADLMVWAAGiKAPD--FMKEIGGLETNRiNQLVVEPTLQTTRDADIFAIGD 315
Cdd:PRK12771 340 GLRVITVEKMELDEDGRPSPVTGEEetLEADLVVLAIG-QDIDsaGLESVPGVEVGR-GVVQVDPNFMMTGRPGVFAGGD 417
|
....*.
gi 1460644627 316 CASCAR 321
Cdd:PRK12771 418 MVPGPR 423
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
173-315 |
1.40e-03 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 40.74 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVE--LSAELHNAVKQLHSYgyKGLTNEA------LNvTLVEAG----ERILPAlppRISGaahnELTKLG 240
Cdd:PRK12770 175 VVVVGAGLTAVDaaLEAVLLGAEKVYLAY--RRTINEApagkyeIE-RLIARGveflELVTPV---RIIG----EGRVEG 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 241 VRvLTQTMVTSADAGGLH----TKDGEY-IEADLMVWAAG-IKAPDFMKEIGGLETNRINQLVVEPTLQTTRdADIFAIG 314
Cdd:PRK12770 245 VE-LAKMRLGEPDESGRPrpvpIPGSEFvLEADTVVFAIGeIPTPPFAKECLGIELNRKGEIVVDEKHMTSR-EGVFAAG 322
|
.
gi 1460644627 315 D 315
Cdd:PRK12770 323 D 323
|
|
| PRK13748 |
PRK13748 |
putative mercuric reductase; Provisional |
222-316 |
2.94e-03 |
|
putative mercuric reductase; Provisional
Pssm-ID: 184298 [Multi-domain] Cd Length: 561 Bit Score: 39.75 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 222 PALPPRISGAAHNEltklGVRVLTQTMVTS-ADAGG---LHTKDGEyIEADLMVWAAGiKAPDFMK---EIGGLETNRIN 294
Cdd:PRK13748 310 PAIGEAVTAAFRAE----GIEVLEHTQASQvAHVDGefvLTTGHGE-LRADKLLVATG-RAPNTRSlalDAAGVTVNAQG 383
|
90 100
....*....|....*....|..
gi 1460644627 295 QLVVEPTLQTTRdADIFAIGDC 316
Cdd:PRK13748 384 AIVIDQGMRTSV-PHIYAAGDC 404
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
173-278 |
3.09e-03 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 39.33 E-value: 3.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGveLSAelhnAVkqlhsygYKGLTNeaLNVTLVEAGE---------RI--LPALPPRISGA-----AHNEL 236
Cdd:COG0492 3 VVIIGAGPAG--LTA----AI-------YAARAG--LKTLVIEGGEpggqlattkEIenYPGFPEGISGPelaerLREQA 67
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1460644627 237 TKLGVRVLTqTMVTSADAGG----LHTKDGEYIEADLMVWAAGIKA 278
Cdd:COG0492 68 ERFGAEILL-EEVTSVDKDDgpfrVTTDDGTEYEAKAVIIATGAGP 112
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
187-286 |
4.76e-03 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 39.12 E-value: 4.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 187 AELHNAVKQLHSYGYKgltnealnVTLVEAGE--RILPAL-PPRISGAAHNE-----------------LTKLGVRVLTQ 246
Cdd:COG0665 100 AALRAEAEALRALGLP--------VELLDAAElrEREPGLgSPDYAGGLYDPddghvdpaklvralaraARAAGVRIREG 171
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1460644627 247 TMVTSADAGG-----LHTKDGEyIEADLMVWAAGIKAPDFMKEIG 286
Cdd:COG0665 172 TPVTGLEREGgrvtgVRTERGT-VRADAVVLAAGAWSARLLPMLG 215
|
|
| PRK08010 |
PRK08010 |
pyridine nucleotide-disulfide oxidoreductase; Provisional |
173-315 |
6.08e-03 |
|
pyridine nucleotide-disulfide oxidoreductase; Provisional
Pssm-ID: 181196 [Multi-domain] Cd Length: 441 Bit Score: 38.84 E-value: 6.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1460644627 173 IAIVGGGATGVELSAELHNavkqlhsYGYKgltnealnVTLVEAGERILPALPPRISGAAHNELTKLGVRVL----TQTM 248
Cdd:PRK08010 161 LGILGGGYIGVEFASMFAN-------FGSK--------VTILEAASLFLPREDRDIADNIATILRDQGVDIIlnahVERI 225
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1460644627 249 VTSADAGGLHTKDGEYIeADLMVWAAGIK--APDFMKEIGGLETNRINQLVVEPTLQTTRDaDIFAIGD 315
Cdd:PRK08010 226 SHHENQVQVHSEHAQLA-VDALLIASGRQpaTASLHPENAGIAVNERGAIVVDKYLHTTAD-NIWAMGD 292
|
|
|