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Concise Results
Standard Results
Full Results
lysine decarboxylase LdcC [Klebsiella variicola]
Protein Classification
lysine decarboxylase LdcC ( domain architecture ID 11487770 )
lysine decarboxylase LdcC catalyzes the conversion from L-lysine to cadaverine; constitutively but weakly expressed under various conditions
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1611.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 1 MNIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 81 AFIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYLDNITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQK 160
Cdd:PRK15399 81 AFIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYLDNITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLI 240
Cdd:PRK15399 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 401 PSYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 481 ADHM Y LDPVKVTILTPGMDEQGNM A EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 ADHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N L 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q L 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1447223810 641 VGR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 713
Cdd:PRK15399 641 VGR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1611.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 1 MNIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 81 AFIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYLDNITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQK 160
Cdd:PRK15399 81 AFIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYLDNITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLI 240
Cdd:PRK15399 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 401 PSYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 481 ADHM Y LDPVKVTILTPGMDEQGNM A EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 ADHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N L 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q L 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1447223810 641 VGR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 713
Cdd:PRK15399 641 VGR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
130-545
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 684.23
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 130 PP FTR ALF N YV QE G K YTF CT PGH M GG SAY QK S P V G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR A FG 209
Cdd:pfam01276 1 PP LYK ALF K YV RR G N YTF HC PGH Q GG AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 210 A EQ SY M V T NGTS T SNK I VGM YSAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP RR EF TRDSIQQKV 289
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 290 RDTGG A QW P VH AVITN S TYDG L LYN TTWLKE TL DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S GE RIP G KV IF E TQS T HK 367
Cdd:pfam01276 161 AEVPD A KG P RL AVITN P TYDG V LYN AKEIVD TL HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G GE NEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 368 M LAALSQAS L IH I K GN -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GNSG K RL IQRSI ERA LD FRK EVQ rlr EE 445
Cdd:pfam01276 241 L LAALSQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GNSG R RL WNECV ERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 446 SDGW FF DI W Q PE A VD KA ECWP VA PGE D WHGF KDADADHMY LDP V K V TILTPGMDE Q G NMA E E G I PA AL VAK F L D E R G V V V 525
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGE T WHGF EGYADNQYF LDP C K L TILTPGMDE D G EYS E F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 1447223810 526 EKT GPY N L LFLF SI G I D K T R 545
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
124-711
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 560.11
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 124 Y L D NITP P FTR AL FN Y VQE G KYT F CT PGH M GG SAY qkspv G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 203
Cdd:COG1982 1 Y M D QLLT P LFD AL KK Y AER G PVS F HV PGH K GG RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 204 I A R AFGA EQSYMVT NGTS TS NK IVGMYSAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PRREFTR 282
Cdd:COG1982 75 A A E AFGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 283 DS I QQK vrdtggaq WPVHAV ITN S TY D G LL Y NTTWLK E TLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gerip GKVIF 360
Cdd:COG1982 155 AL I EHP -------- DAKAVL ITN P TY Y G VC Y DLKAIA E LAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 361 ET QSTHK M L A AL S Q A S LI H I KG NY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N s G KR L IQRSI E R A LDF RKE V 439
Cdd:COG1982 221 VV QSTHK T L G AL T Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 440 QRL reesdg WFFDIWQ PE AVD kaecwpvapgedwhgfkda DADHMY LDP V K V TI LT PG M deqgnmaee GI PAAL VA KF L D 519
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 520 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP D lyaedpdfyrnmriqdlaqgihrlir 598
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP L -------------------------- 399
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 599 qhqlpqlmls AF DV LPE MK M T P HH A WQ rqik G E V E TIE LE NL VGRI S A N M IL PYPPG V PLLMPGE M ITEE sra V L D F L LM 678
Cdd:COG1982 400 ---------- AF PP LPE LV M S P RE A FF ---- A E T E LVP LE EA VGRI A A E M VI PYPPG I PLLMPGE R ITEE --- V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 1447223810 679 L CSI G RHY PGFE tdihgakrd EDGVYRV RV L K N 711
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
131-441
1.22e-132
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 393.54
E-value: 1.22e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 131 P FTR AL FN Y VQE G KYT F CT PGH M GG SAYQ KS pvgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI ARAFGA 210
Cdd:cd00615 1 P LFE AL KE Y AKR G IIS F HV PGH K GG RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA ARAFGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 211 EQSYMVT NGTS T SNK I V GMYSAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP RRE F TRDS I Q qkv 289
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 290 rdtgg AQWPVH AVITN S TY D G LL YN TTWLK E TLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G eripgk VIFET QSTHK 367
Cdd:cd00615 152 ----- HPDAKA AVITN P TY Y G IC YN LRKIV E EAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1447223810 368 M L A AL S Q A S L IH I KG NY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNS GK R L IQRS IE R AL DF R K E VQR 441
Cdd:cd00615 221 T L P AL T Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEEL IE L AL YA R Q E INK 294
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
1-713
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1611.72
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 1 MNIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLY 80
Cdd:PRK15399 1 MNIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 81 AFIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYLDNITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQK 160
Cdd:PRK15399 81 AFIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYLDNITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLI 240
Cdd:PRK15399 161 SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 241 DRNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E 320
Cdd:PRK15399 241 DRNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTS 400
Cdd:PRK15399 321 TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 401 PSYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDAD 480
Cdd:PRK15399 401 PSYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDAD 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 481 ADHM Y LDPVKVTILTPGMDEQGNM A EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAY 560
Cdd:PRK15399 481 ADHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAY 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N L 640
Cdd:PRK15399 561 DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q L 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1447223810 641 VGR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 713
Cdd:PRK15399 641 VGR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
PRK15400
PRK15400 lysine decarboxylase;
1-714
0e+00
lysine decarboxylase;
Pssm-ID: 185298 [Multi-domain]
Cd Length: 714
Bit Score: 1294.04
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 1 MN I IAI MGPH GVY H K D EPI K EL EA AL Q R QG FQ TIW P QNSA DLL QF IE H N P R I CGVIFDWD E Y SVD LC SD I NQL NE Y LPLY 80
Cdd:PRK15400 1 MN V IAI LNHM GVY F K E EPI R EL HR AL E R LN FQ IVY P NDRD DLL KL IE N N A R L CGVIFDWD K Y NLE LC EE I SKM NE N LPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 81 AF I N AH ST M DVS SQ DLR MTLW FFEYALG LSEE IA TR I G Q Y T R EY L D N I T PP F T R ALF N YV Q EGKYTFCTPGHMGG S A Y QK 160
Cdd:PRK15400 81 AF A N TY ST L DVS LN DLR LQVS FFEYALG AADD IA NK I K Q T T D EY I D T I L PP L T K ALF K YV R EGKYTFCTPGHMGG T A F QK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 161 SPVG C LFYDFFG G NT L K A D V SISV T ELGSLLDH T GPH L EAEEYIAR A F G A EQ SYMVTNGTST S NKIVGMYSAPAGST L LI 240
Cdd:PRK15400 161 SPVG S LFYDFFG P NT M K S D I SISV S ELGSLLDH S GPH K EAEEYIAR V F N A DR SYMVTNGTST A NKIVGMYSAPAGST V LI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 241 DRNCHKSL A HL L MMSDV V P LWLK PTRNA L GILGGIP RR EF TRDS I QQK V RD T GG A Q WPVHAVITNSTYDGLLYNT TWL K E 320
Cdd:PRK15400 241 DRNCHKSL T HL M MMSDV T P IYFR PTRNA Y GILGGIP QS EF QHAT I AKR V KE T PN A T WPVHAVITNSTYDGLLYNT DFI K K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 321 TLDV P SIHFDSAWVPYT H F H PIY Q GK S GMSG E R IP GKVI F ETQSTHK M LAA L SQAS L IH I KG NYD EETFNEA F MMHT S TS 400
Cdd:PRK15400 321 TLDV K SIHFDSAWVPYT N F S PIY E GK C GMSG G R VE GKVI Y ETQSTHK L LAA F SQAS M IH V KG DVN EETFNEA Y MMHT T TS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 401 P S Y P IVAS I ETAAAM LR GN S GKRLI QR SIERA LD FRKE VQ RLR E ESDGWFFD I WQP EAV D KA ECWP VAPGED WHGFK DA D 480
Cdd:PRK15400 401 P H Y G IVAS T ETAAAM MK GN A GKRLI NG SIERA IK FRKE IK RLR T ESDGWFFD V WQP DHI D TT ECWP LRSDST WHGFK NI D 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 481 AD HMYLDP V KVT I LTPGM DEQ G N M AEE GIPA AL VAK F LDE R G V VVEKTGPYNLLFLFSIGIDKT R A MG LLR G LT E FKRA Y 560
Cdd:PRK15400 481 NE HMYLDP I KVT L LTPGM KKD G T M SDF GIPA SI VAK Y LDE H G I VVEKTGPYNLLFLFSIGIDKT K A LS LLR A LT D FKRA F 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 561 DLNLRVKNMLP D LY A EDP D FY R NMRIQ D LAQ G IH R LI RQ H Q LP Q LM LS AF D VLP E M K MTP HH A W Q RQIK G EV E TIE L ENL 640
Cdd:PRK15400 561 DLNLRVKNMLP S LY R EDP E FY E NMRIQ E LAQ N IH K LI VH H N LP D LM YR AF E VLP T M V MTP YA A F Q KELH G MT E EVY L DEM 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1447223810 641 VGR IS ANMILPYPPGVPL L MPGEMITEESR A VL D FL L MLC S IG R HYPGFETDIHGA K R DE DG V Y R V R VLK NDER 714
Cdd:PRK15400 641 VGR VN ANMILPYPPGVPL V MPGEMITEESR P VL E FL Q MLC E IG A HYPGFETDIHGA Y R QA DG R Y T V K VLK EESK 714
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
130-545
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 684.23
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 130 PP FTR ALF N YV QE G K YTF CT PGH M GG SAY QK S P V G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR A FG 209
Cdd:pfam01276 1 PP LYK ALF K YV RR G N YTF HC PGH Q GG AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 210 A EQ SY M V T NGTS T SNK I VGM YSAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP RR EF TRDSIQQKV 289
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 290 RDTGG A QW P VH AVITN S TYDG L LYN TTWLKE TL DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S GE RIP G KV IF E TQS T HK 367
Cdd:pfam01276 161 AEVPD A KG P RL AVITN P TYDG V LYN AKEIVD TL HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G GE NEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 368 M LAALSQAS L IH I K GN -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GNSG K RL IQRSI ERA LD FRK EVQ rlr EE 445
Cdd:pfam01276 241 L LAALSQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GNSG R RL WNECV ERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 446 SDGW FF DI W Q PE A VD KA ECWP VA PGE D WHGF KDADADHMY LDP V K V TILTPGMDE Q G NMA E E G I PA AL VAK F L D E R G V V V 525
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGE T WHGF EGYADNQYF LDP C K L TILTPGMDE D G EYS E F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 1447223810 526 EKT GPY N L LFLF SI G I D K T R 545
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
PRK15029
PRK15029 arginine decarboxylase; Provisional
19-710
0e+00
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain]
Cd Length: 755
Bit Score: 566.01
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 19 IKE L EA AL QR Q GFQT I WPQNSA D LLQFIEH N PR I CGVI F DWDEYSV D LCSDIN QL ------- NEYL P L ya F INAHSTMDV 91
Cdd:PRK15029 21 VER L AD AL SQ Q NVTV I KSTSFD D GFAILSS N EA I DCLM F SYQMEHP D EHQNVR QL igklher QQNV P V -- F LLGDREKAL 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 92 SSQ D LRMTLWFF E Y A LG L SEE --- IA T R IGQYTRE Y LDNIT PP FTR AL FN Y VQEGK Y TFCT PGH M GG SAYQ K S P V G CLFY 168
Cdd:PRK15029 99 AAM D RDLLELVD E F A WI L EDT adf IA G R AVAAMTR Y RQQLL PP LFS AL MK Y SDIHE Y SWAA PGH Q GG VGFT K T P A G RFYH 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 169 D FF G G N TLKA D VS I SV T E LGSLLDHTG PHL E A E E Y I AR A FGA EQ S YM V TN GTS T SN KIVGMYSAPAGSTLLI DRNCHKS L 248
Cdd:PRK15029 179 D YY G E N LFRT D MG I ER T S LGSLLDHTG AFG E S E K Y A AR V FGA DR S WS V VV GTS G SN RTIMQACMTDNDVVVV DRNCHKS I 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 249 AHL L MMSDVV P LWLK P T RN AL GI L G G I PRR E FTRDSI Q Q K VRD ----- TGGA Q W P VHA V I TN S TYDG LL YN TTWLKET L D 323
Cdd:PRK15029 259 EQG L ILTGAK P VYMV P S RN RY GI I G P I YPQ E MQPETL Q K K ISE spltk DKAG Q K P SYC V V TN C TYDG VC YN AKEAQDL L E 338
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 324 -- VPSI HFD S AW VP Y TH F H PIY QGKSG M S GE RI -- P G KVI F E T Q STHK M L A ALSQAS L IH I --- K G NYDEET FN E A F MMH 396
Cdd:PRK15029 339 kt SDRL HFD E AW YG Y AR F N PIY ADHYA M R GE PG dh N G PTV F A T H STHK L L N ALSQAS Y IH V reg R G AINFSR FN Q A Y MMH 418
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 397 TS TSP S Y P I V AS IET A AA M LR GNSG KR L I Q RS I ER A L DFR KEVQ RL R --- EESDG WFF DI W QP E A V DKAE ---------- 463
Cdd:PRK15029 419 AT TSP L Y A I C AS NDV A VS M MD GNSG LS L T Q EV I DE A V DFR QAMA RL Y kef TADGS WFF KP W NK E V V TDPQ tgktydfada 498
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 464 ---------- CW PVA PGE D WHGFKD ADADHMY LDP V KV T IL T PGM D E Q G NMA E E G I PAALV AKF L DER G V V VEK T GPYNL 533
Cdd:PRK15029 499 ptkllttvqd CW VMH PGE S WHGFKD LPDNWSM LDP I KV S IL A PGM G E D G ELE E T G V PAALV TAW L GRH G I V PTR T TDFQI 578
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 534 L FLFS I G IDKTRAMG L LRG L TE FKR A YD L N LRVKNML P D L YAED PD F Y R NM R I Q DL AQGIHRLIRQHQLPQLMLS A FDV L 613
Cdd:PRK15029 579 M FLFS M G VTRGKWGT L VNT L CS FKR H YD A N TPLAQVM P E L VEQY PD T Y A NM G I H DL GDTMFAWLKENNPGARLNE A YSG L 658
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 614 P EMKM TP HH A WQRQIKGE VE TIEL ENL V GRI S AN MIL PYPPG V P L L MP GE MITEESRAVLDF L LM L C S IGR H Y PGFE TDI 693
Cdd:PRK15029 659 P VAEI TP RE A YNAIVDNN VE LVSI ENL P GRI A AN SVI PYPPG I P M L LS GE NFGDKNSPQVSY L RS L Q S WDH H F PGFE HET 738
730
....*....|....*..
gi 1447223810 694 H G AKR d E DG V Y R V RVL K 710
Cdd:PRK15029 739 E G TEI - I DG I Y H V MCV K 754
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
124-711
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 560.11
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 124 Y L D NITP P FTR AL FN Y VQE G KYT F CT PGH M GG SAY qkspv G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 203
Cdd:COG1982 1 Y M D QLLT P LFD AL KK Y AER G PVS F HV PGH K GG RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 204 I A R AFGA EQSYMVT NGTS TS NK IVGMYSAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PRREFTR 282
Cdd:COG1982 75 A A E AFGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 283 DS I QQK vrdtggaq WPVHAV ITN S TY D G LL Y NTTWLK E TLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gerip GKVIF 360
Cdd:COG1982 155 AL I EHP -------- DAKAVL ITN P TY Y G VC Y DLKAIA E LAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 361 ET QSTHK M L A AL S Q A S LI H I KG NY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N s G KR L IQRSI E R A LDF RKE V 439
Cdd:COG1982 221 VV QSTHK T L G AL T Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 440 QRL reesdg WFFDIWQ PE AVD kaecwpvapgedwhgfkda DADHMY LDP V K V TI LT PG M deqgnmaee GI PAAL VA KF L D 519
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 520 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP D lyaedpdfyrnmriqdlaqgihrlir 598
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP L -------------------------- 399
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 599 qhqlpqlmls AF DV LPE MK M T P HH A WQ rqik G E V E TIE LE NL VGRI S A N M IL PYPPG V PLLMPGE M ITEE sra V L D F L LM 678
Cdd:COG1982 400 ---------- AF PP LPE LV M S P RE A FF ---- A E T E LVP LE EA VGRI A A E M VI PYPPG I PLLMPGE R ITEE --- V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 1447223810 679 L CSI G RHY PGFE tdihgakrd EDGVYRV RV L K N 711
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
131-441
1.22e-132
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 393.54
E-value: 1.22e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 131 P FTR AL FN Y VQE G KYT F CT PGH M GG SAYQ KS pvgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI ARAFGA 210
Cdd:cd00615 1 P LFE AL KE Y AKR G IIS F HV PGH K GG RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA ARAFGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 211 EQSYMVT NGTS T SNK I V GMYSAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP RRE F TRDS I Q qkv 289
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 290 rdtgg AQWPVH AVITN S TY D G LL YN TTWLK E TLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G eripgk VIFET QSTHK 367
Cdd:cd00615 152 ----- HPDAKA AVITN P TY Y G IC YN LRKIV E EAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1447223810 368 M L A AL S Q A S L IH I KG NY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNS GK R L IQRS IE R AL DF R K E VQR 441
Cdd:cd00615 221 T L P AL T Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEEL IE L AL YA R Q E INK 294
PRK13578
PRK13578 ornithine decarboxylase; Provisional
108-711
1.38e-120
ornithine decarboxylase; Provisional
Pssm-ID: 237434 [Multi-domain]
Cd Length: 720
Bit Score: 377.38
E-value: 1.38e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 108 G LS E EIATRIGQ Y T R E ------- Y LD N IT PPF TRA L FN YV QE G KY TF CT PGH M GG SAYQ K S P V G CL FYDFFG G N TLK AD V 180
Cdd:PRK13578 80 G VF E LCESNNEF Y G R Q letaask Y EE N LL PPF FDT L TD YV EM G NS TF DC PGH Q GG QFFR K H P A G RQ FYDFFG E N LFR AD M 159
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 181 SISVTE LG S LL D H T G PHLE A EEYI A RA F G A EQS Y M V T NGTS T SNK I V GMYSAPA G STL L I DRN C HKS LA H - L L MMSDVV P 259
Cdd:PRK13578 160 CNADVK LG D LL I H E G AAKD A QKHA A KV F N A DKT Y F V L NGTS A SNK V V TNALLTP G DLV L F DRN N HKS NH H g A L IQAGAT P 239
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 260 LW L KPT RN AL G IL GGI PRRE F TRDSIQQKV R DT -- GG A QWPVH --- AVI TNS TYDG LL YN TTWLKETL ---- D V ps I H FD 330
Cdd:PRK13578 240 VY L ETA RN PF G FI GGI DAHC F DEEYLREQI R EV ap ER A DEARP frl AVI QLG TYDG TI YN ARQVVDKI ghlc D Y -- I L FD 317
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 331 SAWV P Y TH F H P IYQGK S GMS --- G E RI PG kv IF E TQS T HK ML A AL SQ A S L IH I K G N Y -------- DEETF N E AFM M H T ST 399
Cdd:PRK13578 318 SAWV G Y EQ F I P MMADC S PLL lel N E ND PG -- IF V TQS V HK QQ A GF SQ T S Q IH K K D N H ikgqaryc PHKRL N N AFM L H A ST 395
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 400 SP S YP IV A SIETA A A M LR G N SG K RL IQRSIERALDF RK EV ---- QRL R ---- EES DG wff DI WQ ---- PEAVDKAECWPV 467
Cdd:PRK13578 396 SP F YP LF A ALDVN A K M HE G E SG R RL WMECVKLGIEA RK LI larc KLI R pfip PVV DG --- KP WQ dypt EQIASDLRFFSF 472
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 468 A PGE D WHGF KDADA D HMYL DP V K VTIL TPG M D - E Q G NMAEE GIPA ALV A KF L D E R G V V V EK TGPYNL LFL FSIGI D KTRA 546
Cdd:PRK13578 473 E PGE K WHGF EGYAE D QYFV DP C K LLLT TPG I D a E T G EYEDF GIPA TIL A NY L R E N G I V P EK CDLNSI LFL LTPAE D MAKL 552
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 547 MG L LRG L TE F KRAYDLNLRVKNM LP DL Y AED P DF YR NMRIQD L A Q GI H R L IRQ H QLP QL MLSA F -- DVL P EMK M T P HH A W 624
Cdd:PRK13578 553 QQ L VAM L AR F EKHIEDDAPLAEV LP SV Y KKN P ER YR GYTLRQ L C Q EM H D L YVS H DVK QL QKEM F rk ASF P RVV M N P QD A N 632
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 625 QRQ I K GEVE TIE L ENLV GRI S A NMI LPYPPGV PLLM PGE MITE esr AV LDFL L M L CSIGRHY PGF ETDIH G -- AKR D E DG 702
Cdd:PRK13578 633 IAY I R GEVE LVR L SEAE GRI A A EGA LPYPPGV LCVV PGE IWGG --- AV QRYF L A L EEGINLL PGF APELQ G vy LET D A DG 709
650
....*....|.
gi 1447223810 703 VY R VR -- VLK N 711
Cdd:PRK13578 710 RK R AY gy VLK P 720
OKR_DC_1_C
pfam03711 Orn/Lys/Arg decarboxylase, C-terminal domain;
570-701
3.55e-67
Orn/Lys/Arg decarboxylase, C-terminal domain;
Pssm-ID: 461020 [Multi-domain]
Cd Length: 132
Bit Score: 217.01
E-value: 3.55e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 570 LP D L Y A ED P DF Y RN M RIQ DL A Q GI H RLI R QHQLPQ L MLS AF DV LPE MK MTP HH A W Q RQIK GEVE TIE L EN L V GRI S A NMI 649
Cdd:pfam03711 1 LP E L V A AY P ER Y EG M GLR DL C Q EM H DFY R ENNVAR L QKE AF RS LPE PA MTP AE A Y Q ELVR GEVE LVP L DE L E GRI A A VGV 80
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1447223810 650 LPYPPG V PLLMPGE MIT EE S R AV LD F LL M L CSIGRHY PGFET D IHG AK R D ED 701
Cdd:pfam03711 81 LPYPPG I PLLMPGE RFG EE N R PI LD Y LL A L EEFDNRF PGFET E IHG VY R E ED 132
OKR_DC_1_N
pfam03709 Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is ...
15-124
3.62e-34
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.
Pssm-ID: 427454 [Multi-domain]
Cd Length: 111
Bit Score: 126.20
E-value: 3.62e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1447223810 15 K DEPIK EL EA AL Q R Q G FQTIWPQNSA DLL QF IE HNPR I CG V IFD WD E Y SVD L CSD I NQL N EY LP LYAFINA H STM DV SSQ 94
Cdd:pfam03709 2 K IAASR EL AE AL E R T G REVVDATSTD DLL AA IE TFTD I AA V VLS WD D Y AAG L LDE I RRR N FD LP VFLLGET H TSE DV PAD 81
90 100 110
....*....|....*....|....*....|
gi 1447223810 95 D LR MTLW F F E Y A LGLS E E IA TR I GQYTRE Y 124
Cdd:pfam03709 82 V LR LIDG F I E L A EDTP E F IA RQ I EAAAKK Y 111
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
