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Conserved domains on  [gi|1444814051|gb|AXL08167|]
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SGT1 protein, partial [Strigomonas culicis]

Protein Classification

p23_CS_SGT1_like and GET2 domain-containing protein( domain architecture ID 13326572)

p23_CS_SGT1_like and GET2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SGS pfam05002
SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found ...
 129-204 6.09e-43

SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found in calcyclin binding proteins.


:

Pssm-ID: 461514 [Multi-domain]  Cd Length: 81  Bit Score: 138.85  E-value: 6.09e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051 129 KNWNSIKID----EEDEKPQGEAALNQLFKQIYGDGTDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:pfam05002   1 KDWDKLEKEdekeEKEEKDGGDAALNAFFQKIYADADEDTRRAMMKSFVESNGTVLSTNWDEVGKKKVETKPPDGMEAKK 80
PLN03088 super family cl33632
SGT1, suppressor of G2 allele of SKP1; Provisional
 9-204 1.62e-41

SGT1, suppressor of G2 allele of SKP1; Provisional


The actual alignment was detected with superfamily member PLN03088:

Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 143.77  E-value: 1.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051   9 KVRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDAngrEYNYTANP-LYGTLSDSAAEVSVRPMKVEVTVR 87
Cdd:PLN03088  156 KYRHEFYQKPEEVVVTVFAKGVPAENVNVDFGEQILSVVIEVPG---EDAYHLQPrLFGKIIPDKCKYEVLSTKIEIRLA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  88 KSTAHQWPSVEGEGQQedvAVPPAGNLPTSASEL-VYPNSRGK--NWNSI----KIDEEDEKPQGEAALNQLFKQIYGDG 160
Cdd:PLN03088  233 KAEPITWASLEYGKGP---AVLPKPNVSSEVSQRpAYPSSKKKkdDWDKLeaevKKEEKDEKLDGDAALNKFFREIYQNA 309

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1444814051 161 TDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:PLN03088  310 DEDTRRAMMKSFVESNGTVLSTNWKEVGSKKIEGSPPDGMELKK 353
 
Name Accession Description Interval E-value
SGS pfam05002
SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found ...
 129-204 6.09e-43

SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found in calcyclin binding proteins.


Pssm-ID: 461514 [Multi-domain]  Cd Length: 81  Bit Score: 138.85  E-value: 6.09e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051 129 KNWNSIKID----EEDEKPQGEAALNQLFKQIYGDGTDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:pfam05002   1 KDWDKLEKEdekeEKEEKDGGDAALNAFFQKIYADADEDTRRAMMKSFVESNGTVLSTNWDEVGKKKVETKPPDGMEAKK 80
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 9-204 1.62e-41

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 143.77  E-value: 1.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051   9 KVRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDAngrEYNYTANP-LYGTLSDSAAEVSVRPMKVEVTVR 87
Cdd:PLN03088  156 KYRHEFYQKPEEVVVTVFAKGVPAENVNVDFGEQILSVVIEVPG---EDAYHLQPrLFGKIIPDKCKYEVLSTKIEIRLA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  88 KSTAHQWPSVEGEGQQedvAVPPAGNLPTSASEL-VYPNSRGK--NWNSI----KIDEEDEKPQGEAALNQLFKQIYGDG 160
Cdd:PLN03088  233 KAEPITWASLEYGKGP---AVLPKPNVSSEVSQRpAYPSSKKKkdDWDKLeaevKKEEKDEKLDGDAALNKFFREIYQNA 309

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1444814051 161 TDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:PLN03088  310 DEDTRRAMMKSFVESNGTVLSTNWKEVGSKKIEGSPPDGMELKK 353
SGT1 COG5091
Suppressor of G2 allele of skp1 and related proteins [General function prediction only];
9-204 8.37e-33

Suppressor of G2 allele of skp1 and related proteins [General function prediction only];


Pssm-ID: 227422 [Multi-domain]  Cd Length: 368  Bit Score: 120.96  E-value: 8.37e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051   9 KVRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDANGREYNYTAnPLYGTLSDSAAEVSVRPMKVEVTVRK 88
Cdd:COG5091   176 EIAYDFSETSDTAIIFIYRPPVGDEQVSPVLEGNTLSISYQPRRLRLWNDITI-SLYKEVYPDIRSIKSFSKRVEVHLRK 254

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  89 STAHQWPSVEGEGQQEDVAVPPAGNLPTSASelvyPNSRGK--NWNSIKIDEEDEKPQGeAALNQLFKQIYGDGTDEQRR 166
Cdd:COG5091   255 VEMVRWGGLNGRPADESSRLSDEGKNSDSAT----PKSSKKqdDWKELMVEDSGDEENP-SVMDSLFQKLYQRADDDTRR 329

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1444814051 167 AMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:COG5091   330 AMMKSFYESNGTALSTDWDDVKSKTITTEPPEGMEPKH 367
p23_CS_SGT1_like cd06466
p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 ...
 13-98 9.56e-17

p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1). Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies suggest that the interaction of hSgt1 with Hsp90 and Hsp70 may be regulated by S100A6 in a Ca2+ dependent fashion. This group also includes the p23_like domains of Melusin and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Melusin is a vertebrate protein which interacts with two splice variants of beta1 integrin, and NCB5OR plays a part in maintaining viable pancreatic beta cells.


Pssm-ID: 107223  Cd Length: 84  Bit Score: 71.85  E-value: 9.56e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  13 EWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDaNGREYNYTANpLYGTLSDSAAEVSVRPMKVEVTVRKSTAH 92
Cdd:cd06466     1 DWYQTDTSVTVTIYAKNVDKEDVKVEFNEQSLSVSIILP-GGSEYQLELD-LFGPIDPEQSKVSVLPTKVEITLKKAEPG 78


                  ....*.
gi 1444814051  93 QWPSVE 98
Cdd:cd06466    79 SWPSLE 84
 
Name Accession Description Interval E-value
SGS pfam05002
SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found ...
 129-204 6.09e-43

SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found in calcyclin binding proteins.


Pssm-ID: 461514 [Multi-domain]  Cd Length: 81  Bit Score: 138.85  E-value: 6.09e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051 129 KNWNSIKID----EEDEKPQGEAALNQLFKQIYGDGTDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:pfam05002   1 KDWDKLEKEdekeEKEEKDGGDAALNAFFQKIYADADEDTRRAMMKSFVESNGTVLSTNWDEVGKKKVETKPPDGMEAKK 80
PLN03088 PLN03088
SGT1, suppressor of G2 allele of SKP1; Provisional
 9-204 1.62e-41

SGT1, suppressor of G2 allele of SKP1; Provisional


Pssm-ID: 215568 [Multi-domain]  Cd Length: 356  Bit Score: 143.77  E-value: 1.62e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051   9 KVRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDAngrEYNYTANP-LYGTLSDSAAEVSVRPMKVEVTVR 87
Cdd:PLN03088  156 KYRHEFYQKPEEVVVTVFAKGVPAENVNVDFGEQILSVVIEVPG---EDAYHLQPrLFGKIIPDKCKYEVLSTKIEIRLA 232

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  88 KSTAHQWPSVEGEGQQedvAVPPAGNLPTSASEL-VYPNSRGK--NWNSI----KIDEEDEKPQGEAALNQLFKQIYGDG 160
Cdd:PLN03088  233 KAEPITWASLEYGKGP---AVLPKPNVSSEVSQRpAYPSSKKKkdDWDKLeaevKKEEKDEKLDGDAALNKFFREIYQNA 309

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1444814051 161 TDEQRRAMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:PLN03088  310 DEDTRRAMMKSFVESNGTVLSTNWKEVGSKKIEGSPPDGMELKK 353
SGT1 COG5091
Suppressor of G2 allele of skp1 and related proteins [General function prediction only];
9-204 8.37e-33

Suppressor of G2 allele of skp1 and related proteins [General function prediction only];


Pssm-ID: 227422 [Multi-domain]  Cd Length: 368  Bit Score: 120.96  E-value: 8.37e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051   9 KVRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDANGREYNYTAnPLYGTLSDSAAEVSVRPMKVEVTVRK 88
Cdd:COG5091   176 EIAYDFSETSDTAIIFIYRPPVGDEQVSPVLEGNTLSISYQPRRLRLWNDITI-SLYKEVYPDIRSIKSFSKRVEVHLRK 254

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  89 STAHQWPSVEGEGQQEDVAVPPAGNLPTSASelvyPNSRGK--NWNSIKIDEEDEKPQGeAALNQLFKQIYGDGTDEQRR 166
Cdd:COG5091   255 VEMVRWGGLNGRPADESSRLSDEGKNSDSAT----PKSSKKqdDWKELMVEDSGDEENP-SVMDSLFQKLYQRADDDTRR 329

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1444814051 167 AMVKSFVESGGTVLSTNWEDVGKKKVEVQPPKGMEAKK 204
Cdd:COG5091   330 AMMKSFYESNGTALSTDWDDVKSKTITTEPPEGMEPKH 367
p23_CS_SGT1_like cd06466
p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 ...
 13-98 9.56e-17

p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1). Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies suggest that the interaction of hSgt1 with Hsp90 and Hsp70 may be regulated by S100A6 in a Ca2+ dependent fashion. This group also includes the p23_like domains of Melusin and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Melusin is a vertebrate protein which interacts with two splice variants of beta1 integrin, and NCB5OR plays a part in maintaining viable pancreatic beta cells.


Pssm-ID: 107223  Cd Length: 84  Bit Score: 71.85  E-value: 9.56e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  13 EWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDaNGREYNYTANpLYGTLSDSAAEVSVRPMKVEVTVRKSTAH 92
Cdd:cd06466     1 DWYQTDTSVTVTIYAKNVDKEDVKVEFNEQSLSVSIILP-GGSEYQLELD-LFGPIDPEQSKVSVLPTKVEITLKKAEPG 78


                  ....*.
gi 1444814051  93 QWPSVE 98
Cdd:cd06466    79 SWPSLE 84
p23_like cd06463
Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) ...
 14-98 1.46e-09

Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). hB-ind1 plays a role in the signaling pathway mediated by the small GTPase Rac1, NUDC is needed for nuclear movement, Melusin interacts with two splice variants of beta1 integrin, and NCB5OR plays a part in maintaining viable pancreatic beta cells.


Pssm-ID: 107220  Cd Length: 84  Bit Score: 52.67  E-value: 1.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  14 WFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDaNGREYNYTANpLYGTLSDSAAEVSVRPMKVEVTVRKSTA-H 92
Cdd:cd06463     1 WYQTLDEVTITIPLKDVTKKDVKVEFTPKSLTVSVKGG-GGKEYLLEGE-LFGPIDPEESKWTVEDRKIEITLKKKEPgE 78


                  ....*.
gi 1444814051  93 QWPSVE 98
Cdd:cd06463    79 WWPRLE 84
p23_melusin_like cd06488
p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related ...
 10-98 1.70e-05

p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (CHORD) domains.


Pssm-ID: 107238  Cd Length: 87  Bit Score: 41.90  E-value: 1.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  10 VRMEWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLDANgREYNYTANpLYGTLSDSAAEVSVRPMKVEVTVRKS 89
Cdd:cd06488     1 CRHDWHQTGSHVVVSVYAKNSNPELSVVEANSTVLTIHIVFEGN-KEFQLDIE-LWGVIDVEKSSVNMLPTKVEIKLRKA 78


                  ....*....
gi 1444814051  90 TAHQWPSVE 98
Cdd:cd06488    79 EPGSWAKLE 87
p23_CacyBP cd06468
p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP) ...
 35-98 1.12e-03

p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes, in mouse endometrial events, and in thymocyte development.


Pssm-ID: 107225  Cd Length: 92  Bit Score: 36.86  E-value: 1.12e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1444814051  35 VVVTKTERSLDVTIRlDANGREYNYTANPLYGTLSDSAAEVSVRPMKVEVTVRKSTAHQWPSVE 98
Cdd:cd06468    30 IQVEFTERSFELKVH-DLNGKNYRFTINRLLKKIDPEKSSFKVKTDRIVITLAKKKEKKWESLT 92
p23_CS_hSgt1_like cd06489
p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related ...
 13-98 5.48e-03

p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.


Pssm-ID: 107239  Cd Length: 84  Bit Score: 34.66  E-value: 5.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1444814051  13 EWFQVAEVLTLTFYVKERLDTDVVVTKTERSLDVTIRLdANGREYNYTANPLYgTLSDSAAEVSVRPMKVEVTVRKSTAH 92
Cdd:cd06489     1 DWYQTESQVVITILIKNVKPEDVSVEFEKRELSATVKL-PSGNDYSLKLHLLH-PIVPEQSSYKILSTKIEIKLKKTEAI 78


                  ....*.
gi 1444814051  93 QWPSVE 98
Cdd:cd06489    79 RWSKLE 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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