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Conserved domains on  [gi|1443084927|ref|XP_025881922|]
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receptor-like protein kinase [Oryza sativa Japonica Group]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
21-625 7.08e-93

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 307.16  E-value: 7.08e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  21 MSSLGFSSPGFLqlLYILKFFCLLPLVIGSNETEsdrqALLCLKSQLTGSAEVLSSWsNASMEFCSWHGVTCSTQypRRV 100
Cdd:PLN00113    1 MAKKGPQHCPYL--IFMLFFLFLNFSMLHAEELE----LLLSFKSSINDPLKYLSNW-NSSADVCLWQGITCNNS--SRV 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 101 TALDLSSEGITGSISPCIANLTYLTKLQLSNNSFYGSIPSELgfltqlsilnismnslegnipseLTSCFKLQKIDLSNN 180
Cdd:PLN00113   72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDI-----------------------FTTSSSLRYLNLSNN 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 181 KLQGSIPSafGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSNTLSGELPK 260
Cdd:PLN00113  129 NFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPR 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 261 ALLNSSSLifldlqqnnfvgsippvtaispKMYYLDlrFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTL 340
Cdd:PLN00113  207 ELGQMKSL----------------------KWIYLG--YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 341 ETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIgYTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTN 420
Cdd:PLN00113  263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 421 NSFTGHIPF-FGSLQNLEILDMAYNMLEAgdwSFVSSLTNCSKLTQLLLDGNNLQGNLPSCIGNlSSSLEHLWLRNNMIS 499
Cdd:PLN00113  342 NKFSGEIPKnLGKHNNLTVLDLSTNNLTG---EIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA-CRSLRRVRLQDNSFS 417
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 500 GLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGYlHSMVFLSFSHNRLSGQIPGTIG 579
Cdd:PLN00113  418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLG 496
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*.
gi 1443084927 580 NLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSLHGTTIAS 625
Cdd:PLN00113  497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPAS 542
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
21-625 7.08e-93

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 307.16  E-value: 7.08e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  21 MSSLGFSSPGFLqlLYILKFFCLLPLVIGSNETEsdrqALLCLKSQLTGSAEVLSSWsNASMEFCSWHGVTCSTQypRRV 100
Cdd:PLN00113    1 MAKKGPQHCPYL--IFMLFFLFLNFSMLHAEELE----LLLSFKSSINDPLKYLSNW-NSSADVCLWQGITCNNS--SRV 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 101 TALDLSSEGITGSISPCIANLTYLTKLQLSNNSFYGSIPSELgfltqlsilnismnslegnipseLTSCFKLQKIDLSNN 180
Cdd:PLN00113   72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDI-----------------------FTTSSSLRYLNLSNN 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 181 KLQGSIPSafGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSNTLSGELPK 260
Cdd:PLN00113  129 NFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPR 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 261 ALLNSSSLifldlqqnnfvgsippvtaispKMYYLDlrFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTL 340
Cdd:PLN00113  207 ELGQMKSL----------------------KWIYLG--YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 341 ETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIgYTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTN 420
Cdd:PLN00113  263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 421 NSFTGHIPF-FGSLQNLEILDMAYNMLEAgdwSFVSSLTNCSKLTQLLLDGNNLQGNLPSCIGNlSSSLEHLWLRNNMIS 499
Cdd:PLN00113  342 NKFSGEIPKnLGKHNNLTVLDLSTNNLTG---EIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA-CRSLRRVRLQDNSFS 417
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 500 GLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGYlHSMVFLSFSHNRLSGQIPGTIG 579
Cdd:PLN00113  418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLG 496
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*.
gi 1443084927 580 NLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSLHGTTIAS 625
Cdd:PLN00113  497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPAS 542
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
118-374 3.73e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 102.32  E-value: 3.73e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 118 IANLTYLTKLQLSNNSFyGSIPSELGFLTQLSILNISMNSLEgNIPSELTSCFKLQKIDLSNNKLQgSIPSAFGDLTELR 197
Cdd:COG4886   109 LSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEELGNLTNLK 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 198 TLILTSNRLSgDIPQSLGSNLSLTYVDLGRNALAgRIPQSLASSTSLQFLILTSNTLSgELPkALLNSSSLIFLDLqQNN 277
Cdd:COG4886   186 ELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDL-SNN 260
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 278 FVGSIPPVTAIsPKMYYLDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTLETLAVNVNNLSGPVPPS 357
Cdd:COG4886   261 QLTDLPPLANL-TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTT 339
                         250
                  ....*....|....*..
gi 1443084927 358 IFNVTSLTYLGMANNSL 374
Cdd:COG4886   340 LALSLSLLALLTLLLLL 356
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
54-93 7.91e-09

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 51.53  E-value: 7.91e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1443084927  54 ESDRQALLCLKSQLTGSAEVLSSWSNASMEFCSWHGVTCS 93
Cdd:pfam08263   2 NDDGQALLAFKSSLNDPPGALSSWNSSSSDPCSWTGVTCD 41
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
462-616 6.86e-08

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 53.64  E-value: 6.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 462 KLTQLLLDGNNLqgnlpSCIGNLSS--SLEHLWLRNNMISGLipPGIGNLKSLNTLYMDDNYLTgNIPPtIGYLHNMNKL 539
Cdd:cd21340     3 RITHLYLNDKNI-----TKIDNLSLckNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIE-KIEN-LENLVNLKKL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 540 YMDYNYLT---G---------------NIPP---------TIGYL-HSMVFLSFSHNRLSgqIPGTIGNLVQLNELRLDE 591
Cdd:cd21340    74 YLGGNRISvveGlenltnleelhienqRLPPgekltfdprSLAALsNSLRVLNISGNNID--SLEPLAPLRNLEQLDASN 151
                         170       180
                  ....*....|....*....|....*..
gi 1443084927 592 NNLS--GSIPASIRHCTQLTKLNLAHN 616
Cdd:cd21340   152 NQISdlEELLDLLSSWPSLRELDLTGN 178
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
21-625 7.08e-93

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 307.16  E-value: 7.08e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  21 MSSLGFSSPGFLqlLYILKFFCLLPLVIGSNETEsdrqALLCLKSQLTGSAEVLSSWsNASMEFCSWHGVTCSTQypRRV 100
Cdd:PLN00113    1 MAKKGPQHCPYL--IFMLFFLFLNFSMLHAEELE----LLLSFKSSINDPLKYLSNW-NSSADVCLWQGITCNNS--SRV 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 101 TALDLSSEGITGSISPCIANLTYLTKLQLSNNSFYGSIPSELgfltqlsilnismnslegnipseLTSCFKLQKIDLSNN 180
Cdd:PLN00113   72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDI-----------------------FTTSSSLRYLNLSNN 128
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 181 KLQGSIPSafGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSNTLSGELPK 260
Cdd:PLN00113  129 NFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPR 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 261 ALLNSSSLifldlqqnnfvgsippvtaispKMYYLDlrFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTL 340
Cdd:PLN00113  207 ELGQMKSL----------------------KWIYLG--YNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNL 262
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 341 ETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIgYTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTN 420
Cdd:PLN00113  263 QYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 421 NSFTGHIPF-FGSLQNLEILDMAYNMLEAgdwSFVSSLTNCSKLTQLLLDGNNLQGNLPSCIGNlSSSLEHLWLRNNMIS 499
Cdd:PLN00113  342 NKFSGEIPKnLGKHNNLTVLDLSTNNLTG---EIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA-CRSLRRVRLQDNSFS 417
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 500 GLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGYlHSMVFLSFSHNRLSGQIPGTIG 579
Cdd:PLN00113  418 GELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLG 496
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|....*.
gi 1443084927 580 NLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSLHGTTIAS 625
Cdd:PLN00113  497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPAS 542
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
98-406 3.34e-45

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 172.73  E-value: 3.34e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  98 RRVTALDLSSEGITGSISPCIANLTYLTKLQLSNNSFYGSIPSELGFLTQLSILNISMNSLEGNIPSELTSCFKLQKIDL 177
Cdd:PLN00113  284 QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDL 363
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 178 SNNKLQGSIPSAFGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSNTLSGE 257
Cdd:PLN00113  364 STNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGR 443
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 258 LPKALLNSSSLIFLDLQQNNFVGSIPPVTAiSPKMYYLDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHV 337
Cdd:PLN00113  444 INSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSC 522
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1443084927 338 PTLETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIGyTLPNIQQLILPNNKFSGSIPSS 406
Cdd:PLN00113  523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG-NVESLVQVNISHNHLHGSLPST 590
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
118-374 3.73e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 102.32  E-value: 3.73e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 118 IANLTYLTKLQLSNNSFyGSIPSELGFLTQLSILNISMNSLEgNIPSELTSCFKLQKIDLSNNKLQgSIPSAFGDLTELR 197
Cdd:COG4886   109 LSNLTNLESLDLSGNQL-TDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLT-DLPEELGNLTNLK 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 198 TLILTSNRLSgDIPQSLGSNLSLTYVDLGRNALAgRIPQSLASSTSLQFLILTSNTLSgELPkALLNSSSLIFLDLqQNN 277
Cdd:COG4886   186 ELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDL-SNN 260
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 278 FVGSIPPVTAIsPKMYYLDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTLETLAVNVNNLSGPVPPS 357
Cdd:COG4886   261 QLTDLPPLANL-TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTT 339
                         250
                  ....*....|....*..
gi 1443084927 358 IFNVTSLTYLGMANNSL 374
Cdd:COG4886   340 LALSLSLLALLTLLLLL 356
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
51-496 4.08e-21

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 96.16  E-value: 4.08e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  51 NETESDRQALLCLKSQLTGSAEVLSSWSNASMEFCSWHGVTCSTQYPRRVTALDLSSEGITGSISPCIANLTYLTKLQLS 130
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 131 NNSFYGSIPSELGFLTQLSILNISMNSlegnipsELTSCFKLQKIDLSNNKLQgSIPSAFGDLTELRTLILTSNRLSgDI 210
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DL 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 211 PQSLGSNLSLTYVDLGRNALAGrIPQSLASSTSLQFLILTSNTLSgELPKALLNSSSLIFLDLQQNNFvgsippvtaisp 290
Cdd:COG4886   152 PEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQL------------ 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 291 kmyyldlrfnhltGTIPSSLGNLSSLTYLCLIGNNLVgSIPDtLGHVPTLETLAVNVNNLSGPvpPSIFNVTSLTYLGMA 370
Cdd:COG4886   218 -------------TDLPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLS 280
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 371 NNSLTGRLPSNIgYTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTNNSFTGHIPFFGSLQNLEILDMAYNMLEAGD 450
Cdd:COG4886   281 NNQLTDLKLKEL-ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLL 359
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1443084927 451 WSFVSSLTNCSKLTQLLLDGNNLQGNLPSCIGNLSSSLEHLWLRNN 496
Cdd:COG4886   360 SLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTL 405
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
300-620 3.60e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 90.38  E-value: 3.60e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 300 NHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTLETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLP 379
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 380 SNIGYTLPNIQQLILPNNK-FSGSIPSSLLNASHLQRLFLTNNSFTGHIPFFGSLQNLEILDMAYNMLEagdwSFVSSLT 458
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTeLDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT----DLPEPLG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 459 NCSKLTQLLLDGNNLQgNLPSCIGNLsSSLEHLWLRNNMISGLiPPGIGNLKSLNTLYMDDNYLTgNIPPTIGYLHNMNK 538
Cdd:COG4886   157 NLTNLKSLDLSNNQLT-DLPEELGNL-TNLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLET 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 539 LYMDYNYLTgnIPPTIGYLHSMVFLSFSHNRLSGqIPgTIGNLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSL 618
Cdd:COG4886   233 LDLSNNQLT--DLPELGNLTNLEELDLSNNQLTD-LP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308

                  ..
gi 1443084927 619 HG 620
Cdd:COG4886   309 NL 310
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
152-550 9.07e-19

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 89.22  E-value: 9.07e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 152 NISMNSLEGNIPSELTSCFKLQKIDLSNNKLQGSIPSAFGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALA 231
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 232 GRIPQSLASSTSLQFLILTSNTLSGelPKALLNSSSLIFLDLQQNNfVGSIPPVTAISPKMYYLDLRFNHLTgTIPSSLG 311
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSG--NEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLPEPLG 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 312 NLSSLTYLCLIGNNLvGSIPDTLGHVPTLETLAVNVNNLSgPVPPSIFNVTSLTYLGMANNSLTgRLPSNIGyTLPNIQQ 391
Cdd:COG4886   157 NLTNLKSLDLSNNQL-TDLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLA-NLTNLET 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 392 LILPNNKFSgSIPSsLLNASHLQRLFLTNNSFTgHIPFFGSLQNLEILDMAYNMLEAGDWSFVSSLTNCSKLTQLLLDGN 471
Cdd:COG4886   233 LDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLN 309
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1443084927 472 NLQGNLPSCIGNLSSSLEHLWLRNNMISGLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNI 550
Cdd:COG4886   310 LLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
237-598 1.09e-17

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 85.76  E-value: 1.09e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 237 SLASSTSLQFLILTSNTLSGELPKALLNSSSLIFLDLQQNNFVGSIPPVTAISPKMYYLDLRFNHLTGTIPSSLGNLSSL 316
Cdd:COG4886    16 LLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 317 TYLcligNNLVGSIPDTLGHVPTLETLAVNVNNLSGpVPPSIFNVTSLTYLGMANNSLTgRLPSNIGYtLPNIQQLILPN 396
Cdd:COG4886    96 TNL----TELDLSGNEELSNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLT-DLPEPLGN-LTNLKSLDLSN 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 397 NKFSgSIPSSLLNASHLQRLFLTNNSFTGHIPFFGSLQNLEILDMAYNMLEagdwSFVSSLTNCSKLTQLLLDGNNLQgN 476
Cdd:COG4886   169 NQLT-DLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLT----DLPEPLANLTNLETLDLSNNQLT-D 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 477 LPScIGNLSSsLEHLWLRNNMISGLipPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGY 556
Cdd:COG4886   243 LPE-LGNLTN-LEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1443084927 557 LHSMVFLSFSHNRLSGQIPGTIGNLVQLNELRLDENNLSGSI 598
Cdd:COG4886   319 LLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLS 360
PLN03150 PLN03150
hypothetical protein; Provisional
127-218 8.17e-17

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 84.10  E-value: 8.17e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 127 LQLSNNSFYGSIPSELGFLTQLSILNISMNSLEGNIPSELTSCFKLQKIDLSNNKLQGSIPSAFGDLTELRTLILTSNRL 206
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
                          90
                  ....*....|..
gi 1443084927 207 SGDIPQSLGSNL 218
Cdd:PLN03150  503 SGRVPAALGGRL 514
PLN03150 PLN03150
hypothetical protein; Provisional
175-292 1.51e-15

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 80.24  E-value: 1.51e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 175 IDLSNNKLQGSIPSAFGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSNTL 254
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1443084927 255 SGELPKAL----LNSSSLIFLDlqqNNFVGSIPPVTAISPKM 292
Cdd:PLN03150  503 SGRVPAALggrlLHRASFNFTD---NAGLCGIPGLRACGPHL 541
PLN03150 PLN03150
hypothetical protein; Provisional
151-238 7.69e-15

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 77.93  E-value: 7.69e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 151 LNISMNSLEGNIPSELTSCFKLQKIDLSNNKLQGSIPSAFGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNAL 230
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                  ....*...
gi 1443084927 231 AGRIPQSL 238
Cdd:PLN03150  503 SGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
515-602 4.31e-14

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 75.24  E-value: 4.31e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 515 LYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGYLHSMVFLSFSHNRLSGQIPGTIGNLVQLNELRLDENNL 594
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                  ....*...
gi 1443084927 595 SGSIPASI 602
Cdd:PLN03150  503 SGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
491-579 4.19e-12

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 69.07  E-value: 4.19e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 491 LWLRNNMISGLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNYLTGNIPPTIGYLHSMVFLSFSHNRL 570
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                  ....*....
gi 1443084927 571 SGQIPGTIG 579
Cdd:PLN03150  503 SGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
295-383 1.09e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 67.92  E-value: 1.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 295 LDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTLETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSL 374
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                  ....*....
gi 1443084927 375 TGRLPSNIG 383
Cdd:PLN03150  503 SGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
98-166 1.29e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 67.53  E-value: 1.29e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1443084927  98 RRVTALDLSSEGITGSISPCIANLTYLTKLQLSNNSFYGSIPSELGFLTQLSILNISMNSLEGNIPSEL 166
Cdd:PLN03150  442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
466-576 9.81e-11

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 64.84  E-value: 9.81e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 466 LLLDGNNLQGNLPSCIGNLSSsLEHLWLRNNMISGLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIGYLHNMNKLYMDYNY 545
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRH-LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1443084927 546 LTGNIPPTIG--YLHSMVFlSFSHNRLSGQIPG 576
Cdd:PLN03150  502 LSGRVPAALGgrLLHRASF-NFTDNAGLCGIPG 533
PLN03150 PLN03150
hypothetical protein; Provisional
539-625 1.28e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 64.45  E-value: 1.28e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 539 LYMDYNYLTGNIPPTIGYLHSMVFLSFSHNRLSGQIPGTIGNLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSL 618
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                  ....*..
gi 1443084927 619 HGTTIAS 625
Cdd:PLN03150  503 SGRVPAA 509
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
101-345 3.13e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.64  E-value: 3.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 101 TALDLSSEGITgSISPCIANLTYLTKLQLSNNSFyGSIPSELGFLTQLSILNISMNSLEgNIPSELTSCFKLQKIDLSNN 180
Cdd:COG4886   162 KSLDLSNNQLT-DLPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLETLDLSNN 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 181 KLQgSIPSaFGDLTELRTLILTSNRLSgDIPQSLG--------------SNLSLTYVDLGRNALAGRIPQSLASSTSLQF 246
Cdd:COG4886   239 QLT-DLPE-LGNLTNLEELDLSNNQLT-DLPPLANltnlktldlsnnqlTDLKLKELELLLGLNSLLLLLLLLNLLELLI 315
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 247 LILTSNTLSGELPKALLNSSSLIFLDLQQNNFVGSIPPVTAISPKMYYLDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNL 326
Cdd:COG4886   316 LLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLT 395
                         250
                  ....*....|....*....
gi 1443084927 327 VGSIPDTLGHVPTLETLAV 345
Cdd:COG4886   396 TTAGVLLLTLALLDAVNTE 414
PLN03150 PLN03150
hypothetical protein; Provisional
389-482 4.46e-10

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 62.53  E-value: 4.46e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 389 IQQLILPNNKFSGSIPSSLLNASHLQRLFLTNNSFTGHIPF-FGSLQNLEILDMAYNMLEAgdwSFVSSLTNCSKLTQLL 467
Cdd:PLN03150  420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNG---SIPESLGQLTSLRILN 496
                          90
                  ....*....|....*
gi 1443084927 468 LDGNNLQGNLPSCIG 482
Cdd:PLN03150  497 LNGNSLSGRVPAALG 511
LRRNT_2 pfam08263
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ...
54-93 7.91e-09

Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.


Pssm-ID: 462411 [Multi-domain]  Cd Length: 41  Bit Score: 51.53  E-value: 7.91e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1443084927  54 ESDRQALLCLKSQLTGSAEVLSSWSNASMEFCSWHGVTCS 93
Cdd:pfam08263   2 NDDGQALLAFKSSLNDPPGALSSWNSSSSDPCSWTGVTCD 41
PLN03150 PLN03150
hypothetical protein; Provisional
462-531 7.93e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 7.93e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 462 KLTQLLLDGNNLQGNLPSCIGNLsSSLEHLWLRNNMISGLIPPGIGNLKSLNTLYMDDNYLTGNIPPTIG 531
Cdd:PLN03150  443 HLQSINLSGNSIRGNIPPSLGSI-TSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
223-352 8.13e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 8.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 223 VDLGRNALAGRIPQSLASSTSLQFLILTSNTLSGELPKALlnssslifldlqqnnfvGSIPPVTAispkmyyLDLRFNHL 302
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSL-----------------GSITSLEV-------LDLSYNSF 478
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1443084927 303 TGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPtLETLAVNVNNLSG 352
Cdd:PLN03150  479 NGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL-LHRASFNFTDNAG 527
PLN03150 PLN03150
hypothetical protein; Provisional
326-407 8.49e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 8.49e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 326 LVGSIPDTLGHVPTLETLAVNVNNLSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIGyTLPNIQQLILPNNKFSGSIPS 405
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLG-QLTSLRILNLNGNSLSGRVPA 508

                  ..
gi 1443084927 406 SL 407
Cdd:PLN03150  509 AL 510
PLN03150 PLN03150
hypothetical protein; Provisional
344-428 1.62e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 57.52  E-value: 1.62e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 344 AVNVNN--LSGPVPPSIFNVTSLTYLGMANNSLTGRLPSNIGyTLPNIQQLILPNNKFSGSIPSSLLNASHLQRLFLTNN 421
Cdd:PLN03150  422 GLGLDNqgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLG-SITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500

                  ....*..
gi 1443084927 422 SFTGHIP 428
Cdd:PLN03150  501 SLSGRVP 507
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
462-616 6.86e-08

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 53.64  E-value: 6.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 462 KLTQLLLDGNNLqgnlpSCIGNLSS--SLEHLWLRNNMISGLipPGIGNLKSLNTLYMDDNYLTgNIPPtIGYLHNMNKL 539
Cdd:cd21340     3 RITHLYLNDKNI-----TKIDNLSLckNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIE-KIEN-LENLVNLKKL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 540 YMDYNYLT---G---------------NIPP---------TIGYL-HSMVFLSFSHNRLSgqIPGTIGNLVQLNELRLDE 591
Cdd:cd21340    74 YLGGNRISvveGlenltnleelhienqRLPPgekltfdprSLAALsNSLRVLNISGNNID--SLEPLAPLRNLEQLDASN 151
                         170       180
                  ....*....|....*....|....*..
gi 1443084927 592 NNLS--GSIPASIRHCTQLTKLNLAHN 616
Cdd:cd21340   152 NQISdlEELLDLLSSWPSLRELDLTGN 178
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
105-310 4.22e-05

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 46.32  E-value: 4.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 105 LSSEGITGSISPCIANlTYLTKLQLSNNSFYGS----IPSELGFLTQLSILNISMNSL--EG--NIPSELTSCFKLQKID 176
Cdd:COG5238   192 IGDEGIEELAEALTQN-TTVTTLWLKRNPIGDEgaeiLAEALKGNKSLTTLDLSNNQIgdEGviALAEALKNNTTVETLY 270
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 177 LSNNKL--QG--SIPSAFGDLTELRTLILTSNRLSGD----IPQSLGSNLSLTYVDLGRNAL----AGRIPQSLASSTSL 244
Cdd:COG5238   271 LSGNQIgaEGaiALAKALQGNTTLTSLDLSVNRIGDEgaiaLAEGLQGNKTLHTLNLAYNGIgaqgAIALAKALQENTTL 350
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1443084927 245 QFLILTSNTLSGE----LPKALLNSSSLIFLDLQQNNfvgsIPPVTAIS-------PKMYYLDLRFNHLTGTIPSSL 310
Cdd:COG5238   351 HSLDLSDNQIGDEgaiaLAKYLEGNTTLRELNLGKNN----IGKQGAEAlidalqtNRLHTLILDGNLIGAEAQQRL 423
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
138-351 6.07e-05

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 45.42  E-value: 6.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 138 IPSELGFLTQLSILNISMNSLEGN------IPSELTSCFKLQKIDLSNNKLQGSIPSAFGDLT---ELRTLILTSNRLSG 208
Cdd:cd00116    43 LASALRPQPSLKELCLSLNETGRIprglqsLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGD 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 209 DIPQ----SLGSN-LSLTYVDLGRNALAGRIPQSLA----SSTSLQFLILTSNTLSGE----LPKALLNSSSLIFLDLQQ 275
Cdd:cd00116   123 RGLRllakGLKDLpPALEKLVLGRNRLEGASCEALAkalrANRDLKELNLANNGIGDAgiraLAEGLKANCNLEVLDLNN 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 276 NNF----VGSIPPVTAISPKMYYLDLRFNHLTGTI-----PSSLGNLSSLTYLCLIGNNLVGSIPDTLGHV----PTLET 342
Cdd:cd00116   203 NGLtdegASALAETLASLKSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDITDDGAKDLAEVlaekESLLE 282

                  ....*....
gi 1443084927 343 LAVNVNNLS 351
Cdd:cd00116   283 LDLRGNKFG 291
LRR_8 pfam13855
Leucine rich repeat;
171-230 7.10e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 7.10e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 171 KLQKIDLSNNKLQGSIPSAFGDLTELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNAL 230
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
98-289 3.28e-04

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 42.47  E-value: 3.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  98 RRVTALDLSSEGIT--GSISPCIAnltyLTKLQLSNNSFYgSIPSeLGFLTQLSIL-----NISmnSLEGnipseLTSCF 170
Cdd:cd21340     2 KRITHLYLNDKNITkiDNLSLCKN----LKVLYLYDNKIT-KIEN-LEFLTNLTHLylqnnQIE--KIEN-----LENLV 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 171 KLQKIDLSNNKLqgSIPSAFGDLTELRTLILTSNRLSGDI-----PQSLGSNL-SLTYVDLGRNALagRIPQSLASSTSL 244
Cdd:cd21340    69 NLKKLYLGGNRI--SVVEGLENLTNLEELHIENQRLPPGEkltfdPRSLAALSnSLRVLNISGNNI--DSLEPLAPLRNL 144
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1443084927 245 QFLILTSNTLS--GELPKALLNSSSLIFLDLQQNnfvgsipPVTAIS 289
Cdd:cd21340   145 EQLDASNNQISdlEELLDLLSSWPSLRELDLTGN-------PVCKKP 184
LRR_8 pfam13855
Leucine rich repeat;
194-252 6.49e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 38.27  E-value: 6.49e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1443084927 194 TELRTLILTSNRLSGDIPQSLGSNLSLTYVDLGRNALAGRIPQSLASSTSLQFLILTSN 252
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
209-469 8.49e-04

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 41.96  E-value: 8.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 209 DIPQSLGSNLSLTYVDLGRNALA------GRIPQSLASSTSLQFLILTSNTLSGELP---KALLNSSSLIFLDLQQNNFV 279
Cdd:cd00116    42 ALASALRPQPSLKELCLSLNETGriprglQSLLQGLTKGCGLQELDLSDNALGPDGCgvlESLLRSSSLQELKLNNNGLG 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 280 GSIPPVTAISPKMYYLDLRFNHLTGtipsslgnlssltylCLIGNNLVGSIPDTLGHVPTLETLAVNVNNLSGPVPPSIF 359
Cdd:cd00116   122 DRGLRLLAKGLKDLPPALEKLVLGR---------------NRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALA 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 360 ----NVTSLTYLGMANNSLT---GRLPSNIGYTLPNIQQLILPNNKFSGSIPSSLLNASH-----LQRLFLTNNSFT--G 425
Cdd:cd00116   187 eglkANCNLEVLDLNNNGLTdegASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLspnisLLTLSLSCNDITddG 266
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1443084927 426 HIPFFGSLQN---LEILDMAYNMLEAGDWSFVSSLTNCSKLTQLLLD 469
Cdd:cd00116   267 AKDLAEVLAEkesLLELDLRGNKFGEEGAQLLAESLLEPGNELESLW 313
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
120-278 1.12e-03

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 41.57  E-value: 1.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 120 NLTYLTKLQLSNNSFY----GSIPSEL--GFLTQLSILNISM--------------------------NSLEGN----IP 163
Cdd:cd00116    79 KGCGLQELDLSDNALGpdgcGVLESLLrsSSLQELKLNNNGLgdrglrllakglkdlppaleklvlgrNRLEGAsceaLA 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 164 SELTSCFKLQKIDLSNNKLQGS-IPS---AFGDLTELRTLILTSNRL----SGDIPQSLGSNLSLTYVDLGRNALAGRI- 234
Cdd:cd00116   159 KALRANRDLKELNLANNGIGDAgIRAlaeGLKANCNLEVLDLNNNGLtdegASALAETLASLKSLEVLNLGDNNLTDAGa 238
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1443084927 235 ----PQSLASSTSLQFLILTSNTLSGE----LPKALLNSSSLIFLDLQQNNF 278
Cdd:cd00116   239 aalaSALLSPNISLLTLSLSCNDITDDgakdLAEVLAEKESLLELDLRGNKF 290
LRR_8 pfam13855
Leucine rich repeat;
563-618 3.43e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.35  E-value: 3.43e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1443084927 563 LSFSHNRLSGQIPGTIGNLVQLNELRLDENNLSGSIPASIRHCTQLTKLNLAHNSL 618
Cdd:pfam13855   6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
95-264 3.91e-03

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 40.16  E-value: 3.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927  95 QYPRRVTALDLSSEGITG----SISPCIANLTYLTKLQLSNNsfygsipsELGFLTQLSIlnisMNSLEGNIPseltscf 170
Cdd:COG5238   261 KNNTTVETLYLSGNQIGAegaiALAKALQGNTTLTSLDLSVN--------RIGDEGAIAL----AEGLQGNKT------- 321
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443084927 171 kLQKIDLSNNKL--QGSIP--SAFGDLTELRTLILTSNRLSGD----IPQSLGSNLSLTYVDLGRNALAGRIPQSLASS- 241
Cdd:COG5238   322 -LHTLNLAYNGIgaQGAIAlaKALQENTTLHSLDLSDNQIGDEgaiaLAKYLEGNTTLRELNLGKNNIGKQGAEALIDAl 400
                         170       180
                  ....*....|....*....|....*
gi 1443084927 242 --TSLQFLILTSNTLsGELPKALLN 264
Cdd:COG5238   401 qtNRLHTLILDGNLI-GAEAQQRLE 424
LRR_8 pfam13855
Leucine rich repeat;
290-350 5.34e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.58  E-value: 5.34e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1443084927 290 PKMYYLDLRFNHLTGTIPSSLGNLSSLTYLCLIGNNLVGSIPDTLGHVPTLETLAVNVNNL 350
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
411-473 7.25e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.19  E-value: 7.25e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1443084927 411 SHLQRLFLTNNSFTgHIP--FFGSLQNLEILDMAYNMLeagdwSFVS--SLTNCSKLTQLLLDGNNL 473
Cdd:pfam13855   1 PNLRSLDLSNNRLT-SLDdgAFKGLSNLKVLDLSNNLL-----TTLSpgAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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