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Conserved domains on  [gi|1443083618|ref|XP_025881727|]
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cationic amino acid transporter 8, vacuolar [Oryza sativa Japonica Group]

Protein Classification

cationic amino acid transporter( domain architecture ID 1903485)

cationic amino acid transporter are involved in the transport of the cationic amino acids

Gene Ontology:  GO:0006865|GO:0015171
PubMed:  10931886
TCDB:  2.A.3.3

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0303 super family cl47123
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
63-568 7.26e-129

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00906:

Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 389.56  E-value: 7.26e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  63 TLRAVSENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSF 142
Cdd:TIGR00906  17 DLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAY 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 143 SYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRD-TDSLRIHVPALAEGFNL-LDPIAVVVLVSTSAVA 220
Cdd:TIGR00906  97 LYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQiGQFRRTYFKLNYDGLAEyPDFFAVCLILLLAVLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 221 MSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGNLAPS-------FFPFGAAGVFRAAGVVYWSYTGFDMVATMAEE 293
Cdd:TIGR00906 177 SFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITeekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 294 TKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQ 373
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPL 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 374 ARYTTQIARTHMIPPYFALVHPTTGTPIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVA--- 450
Cdd:TIGR00906 337 PRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPGlvy 416
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 451 -GATTPGQLRTF--------------------LAFLALVVLSSIGVSAYYNSRYARRWP-GYAAFGCGWAAGAAGLAACA 508
Cdd:TIGR00906 417 dQAKDTDEKDTLdswvpftsksesqsegfslrTLFSGLILGLSILTTYGRAAIAEEAWSiALLTLFLVLFLLVVLTIWRQ 496
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 509 EKQRAPRVYGAPLVPWLPAMSIATNLFLMGSLGTAAYARFGICTAAMLVYYVLFGVHATY 568
Cdd:TIGR00906 497 PQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSL 556
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
63-568 7.26e-129

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 389.56  E-value: 7.26e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  63 TLRAVSENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSF 142
Cdd:TIGR00906  17 DLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAY 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 143 SYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRD-TDSLRIHVPALAEGFNL-LDPIAVVVLVSTSAVA 220
Cdd:TIGR00906  97 LYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQiGQFRRTYFKLNYDGLAEyPDFFAVCLILLLAVLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 221 MSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGNLAPS-------FFPFGAAGVFRAAGVVYWSYTGFDMVATMAEE 293
Cdd:TIGR00906 177 SFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITeekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 294 TKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQ 373
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPL 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 374 ARYTTQIARTHMIPPYFALVHPTTGTPIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVA--- 450
Cdd:TIGR00906 337 PRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPGlvy 416
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 451 -GATTPGQLRTF--------------------LAFLALVVLSSIGVSAYYNSRYARRWP-GYAAFGCGWAAGAAGLAACA 508
Cdd:TIGR00906 417 dQAKDTDEKDTLdswvpftsksesqsegfslrTLFSGLILGLSILTTYGRAAIAEEAWSiALLTLFLVLFLLVVLTIWRQ 496
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 509 EKQRAPRVYGAPLVPWLPAMSIATNLFLMGSLGTAAYARFGICTAAMLVYYVLFGVHATY 568
Cdd:TIGR00906 497 PQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSL 556
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
72-478 7.71e-62

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 210.91  E-value: 7.71e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  72 LRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGD 151
Cdd:COG0531     9 LKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 152 IAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRDTDSLrihvpalaegfnlldpIAVVVLVSTSAVAMSGARLTSTLN 231
Cdd:COG0531    88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVL----------------IALVLILLLTLLNLRGVKESAKVN 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 232 SLASVVGIAIIAFVLAAGFSHFDAGNLAPsFFPF--GAAGVFRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLGLISSM 309
Cdd:COG0531   152 NILTVLKLLVLLLFIVVGLFAFDPANFTP-FLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSL 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 310 SSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGM-RWARYVVALGALKGMTSGLLVGALGQARYTTQIARTHMIPP 388
Cdd:COG0531   231 LIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFgPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPK 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 389 YFALVHPTTGTPIYATVAVTLGAACVALF--SSLDVLASVSSISTLFIFALVAVALLVRRYhvagaTTPGQLRTFLAFLA 466
Cdd:COG0531   311 VFAKVHPRFGTPVNAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRR-----RRPDLPRPFRVPLP 385
                         410
                  ....*....|..
gi 1443083618 467 LVVLSSIGVSAY 478
Cdd:COG0531   386 LIPILGILLCLF 397
AA_permease_2 pfam13520
Amino acid permease;
76-448 4.55e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 110.86  E-value: 4.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  76 LSWLDLAFLGFGSVVGSGVFVLTGQEArfdAGPAIPLAYAAAGFSALLS-SFCYAELATEIPSAGGSFSYLRVELGDIAA 154
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS---GGPALIVWGWIAAIIFSLAvGLVYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 155 FLAAGNILLEAVVGAAGLGRSWTSYLAALLGRDTDSLRIHVPAlaegfnlldpIAVVVLVSTSAVAMSGARLTSTLNSLA 234
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYG----------IAIAILIIFAIINIRGVRESAKIQNIL 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 235 SVVG-------IAIIAFVLAAGFSHFDAGNLAPSFFPFGAAGVFRAAGVVYWSYTGFDMVATMAEETKNpgRDVPLGLIS 307
Cdd:pfam13520 148 GILKlllplilIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFI 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 308 SMSSITVVYCLMSLALVGM----QRYTEIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQARYTTQIART 383
Cdd:pfam13520 226 GVIIVGVLYILVNIAFFGVvpddEIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARD 305
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1443083618 384 HMIP--PYFALVHPtTGTPIYAT-----VAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYH 448
Cdd:pfam13520 306 GVLPfsRFFAKVNK-FGSPIRAIiltaiLSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKK 376
frlA PRK11357
amino acid permease;
68-470 1.00e-16

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 82.98  E-value: 1.00e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIP-LAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLR 146
Cdd:PRK11357    2 GSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLK 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 147 VELGDIAAFLAAgnilleavvgaaglgrsWTSYLAAllgrDTDSLRIHVPALAEGFNLLDP--------IAVVVLVSTSA 218
Cdd:PRK11357   82 NAGSRPLAFLSG-----------------WASFWAN----DAPSLSIMALAIVSNLGFLTPidpllgkfIAAGLIIAFML 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 219 VAMSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGN-LAPSFFPFGAAGVFRA--AGV--VYWSYTGFDMVATMAEE 293
Cdd:PRK11357  141 LHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENfAAPTTTAIGATGSFMAllAGIsaTSWSYTGMASICYMTGE 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 294 TKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEI---DANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGA 370
Cdd:PRK11357  221 IKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLansETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCV 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 371 LGQARYTTQIARTHMIPPYFALVHPTTGTPiYATVAVTLGAACVALF-SSLDVLASVSSISTLFIFALVAVALLVRR--- 446
Cdd:PRK11357  301 MYQPRLEYAMAKDNLFFKCFGHVHPKYNTP-DVSIILQGALGIFFIFvSDLTSLLGYFTLVMCFKNTLTFGSIIWCRkrd 379
                         410       420
                  ....*....|....*....|....*
gi 1443083618 447 -YHVAGATTPGQLRTFLAFLALVVL 470
Cdd:PRK11357  380 dYKPLWRTPAFGLMTTLAIASSLIL 404
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
63-568 7.26e-129

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 389.56  E-value: 7.26e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  63 TLRAVSENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSF 142
Cdd:TIGR00906  17 DLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAY 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 143 SYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRD-TDSLRIHVPALAEGFNL-LDPIAVVVLVSTSAVA 220
Cdd:TIGR00906  97 LYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQiGQFRRTYFKLNYDGLAEyPDFFAVCLILLLAVLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 221 MSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGNLAPS-------FFPFGAAGVFRAAGVVYWSYTGFDMVATMAEE 293
Cdd:TIGR00906 177 SFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITeekgaggFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 294 TKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQ 373
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPL 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 374 ARYTTQIARTHMIPPYFALVHPTTGTPIYATVAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYHVA--- 450
Cdd:TIGR00906 337 PRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQPGlvy 416
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 451 -GATTPGQLRTF--------------------LAFLALVVLSSIGVSAYYNSRYARRWP-GYAAFGCGWAAGAAGLAACA 508
Cdd:TIGR00906 417 dQAKDTDEKDTLdswvpftsksesqsegfslrTLFSGLILGLSILTTYGRAAIAEEAWSiALLTLFLVLFLLVVLTIWRQ 496
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 509 EKQRAPRVYGAPLVPWLPAMSIATNLFLMGSLGTAAYARFGICTAAMLVYYVLFGVHATY 568
Cdd:TIGR00906 497 PQNKQKVAFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSL 556
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
72-478 7.71e-62

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 210.91  E-value: 7.71e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  72 LRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGD 151
Cdd:COG0531     9 LKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 152 IAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRDTDSLrihvpalaegfnlldpIAVVVLVSTSAVAMSGARLTSTLN 231
Cdd:COG0531    88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVL----------------IALVLILLLTLLNLRGVKESAKVN 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 232 SLASVVGIAIIAFVLAAGFSHFDAGNLAPsFFPF--GAAGVFRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLGLISSM 309
Cdd:COG0531   152 NILTVLKLLVLLLFIVVGLFAFDPANFTP-FLPAggGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSL 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 310 SSITVVYCLMSLALVGMQRYTEIDANAAYSVAFAAAGM-RWARYVVALGALKGMTSGLLVGALGQARYTTQIARTHMIPP 388
Cdd:COG0531   231 LIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFgPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPK 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 389 YFALVHPTTGTPIYATVAVTLGAACVALF--SSLDVLASVSSISTLFIFALVAVALLVRRYhvagaTTPGQLRTFLAFLA 466
Cdd:COG0531   311 VFAKVHPRFGTPVNAILLTGVIALLLLLLgaASFTALASLASVGVLLAYLLVALAVIVLRR-----RRPDLPRPFRVPLP 385
                         410
                  ....*....|..
gi 1443083618 467 LVVLSSIGVSAY 478
Cdd:COG0531   386 LIPILGILLCLF 397
AA_permease_2 pfam13520
Amino acid permease;
76-448 4.55e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 110.86  E-value: 4.55e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  76 LSWLDLAFLGFGSVVGSGVFVLTGQEArfdAGPAIPLAYAAAGFSALLS-SFCYAELATEIPSAGGSFSYLRVELGDIAA 154
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVAS---GGPALIVWGWIAAIIFSLAvGLVYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 155 FLAAGNILLEAVVGAAGLGRSWTSYLAALLGRDTDSLRIHVPAlaegfnlldpIAVVVLVSTSAVAMSGARLTSTLNSLA 234
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYG----------IAIAILIIFAIINIRGVRESAKIQNIL 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 235 SVVG-------IAIIAFVLAAGFSHFDAGNLAPSFFPFGAAGVFRAAGVVYWSYTGFDMVATMAEETKNpgRDVPLGLIS 307
Cdd:pfam13520 148 GILKlllplilIIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFI 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 308 SMSSITVVYCLMSLALVGM----QRYTEIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQARYTTQIART 383
Cdd:pfam13520 226 GVIIVGVLYILVNIAFFGVvpddEIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARD 305
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1443083618 384 HMIP--PYFALVHPtTGTPIYAT-----VAVTLGAACVALFSSLDVLASVSSISTLFIFALVAVALLVRRYH 448
Cdd:pfam13520 306 GVLPfsRFFAKVNK-FGSPIRAIiltaiLSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKK 376
frlA PRK11357
amino acid permease;
68-470 1.00e-16

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 82.98  E-value: 1.00e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIP-LAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLR 146
Cdd:PRK11357    2 GSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLK 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 147 VELGDIAAFLAAgnilleavvgaaglgrsWTSYLAAllgrDTDSLRIHVPALAEGFNLLDP--------IAVVVLVSTSA 218
Cdd:PRK11357   82 NAGSRPLAFLSG-----------------WASFWAN----DAPSLSIMALAIVSNLGFLTPidpllgkfIAAGLIIAFML 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 219 VAMSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGN-LAPSFFPFGAAGVFRA--AGV--VYWSYTGFDMVATMAEE 293
Cdd:PRK11357  141 LHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENfAAPTTTAIGATGSFMAllAGIsaTSWSYTGMASICYMTGE 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 294 TKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEI---DANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGA 370
Cdd:PRK11357  221 IKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLansETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCV 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 371 LGQARYTTQIARTHMIPPYFALVHPTTGTPiYATVAVTLGAACVALF-SSLDVLASVSSISTLFIFALVAVALLVRR--- 446
Cdd:PRK11357  301 MYQPRLEYAMAKDNLFFKCFGHVHPKYNTP-DVSIILQGALGIFFIFvSDLTSLLGYFTLVMCFKNTLTFGSIIWCRkrd 379
                         410       420
                  ....*....|....*....|....*
gi 1443083618 447 -YHVAGATTPGQLRTFLAFLALVVL 470
Cdd:PRK11357  380 dYKPLWRTPAFGLMTTLAIASSLIL 404
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
87-479 1.10e-16

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 83.26  E-value: 1.10e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  87 GSVVGSGVFVLTGQEARFDAGPAIPL-AYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGDIAAFLAagnILLEA 165
Cdd:TIGR00911  55 GTIIGSGIFVSPKGVLKNAGSVGLALiMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLR---LWIEL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 166 VV----GAAGLGRSWTSYLAALLGRDTDslrihVPALAegfnlLDPIAVVVLVSTSAVAMSGARLTSTLNSLASVVGIAI 241
Cdd:TIGR00911 132 LVirpgSQAVNALNFAIYILTPVFPDCE-----VPEWA-----IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLA 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 242 IAFVLAAGFSHFDAGNLApSFFPFGA--------AGVFRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLGLISSMSSIT 313
Cdd:TIGR00911 202 LLLIIITGWVQLGKGGVE-SLNPKNAfegtetsaGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVT 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 314 VVYCLMSLALVGMQRYTEIDANAAYSVA---FAAAGMRWARYV-VALGALKGMTSGLlvgaLGQARYTTQIARTHMIPPY 389
Cdd:TIGR00911 281 FIYVLTNIAYFTVLSPEELLASLAVAVDfgeRLLGVMSWAMPAlVGLSCFGSVNGSL----FSSSRLFFVGGREGHLPSL 356
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 390 FALVHPTTGTPIYA---TVAVTLgaacVALFSS--LDVLASVSSISTLFIFALVAvALLVRRYHVAGATTPGQLRTFLAF 464
Cdd:TIGR00911 357 LSMIHVKRLTPLPSlliVCTLTL----LMLFSGdiYSLINLISFANWLFNALAVA-GLLWLRYKRPEMNRPIKVPLFFPV 431
                         410
                  ....*....|....*
gi 1443083618 465 LALVVLSSIGVSAYY 479
Cdd:TIGR00911 432 FFLLSCLFLIILSLY 446
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
126-446 1.85e-16

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 82.20  E-value: 1.85e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 126 FCYAELATEIPSAGGSFSYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAALLGRDTDSLrihvpalaegfnll 205
Cdd:TIGR00908  58 FSLAELSTMIPTAGGGYGFARRAFGPWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVGPGWL-------------- 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 206 dpIAVVVLVSTSAVAMSGARLTSTLNSLASVVGIAIIAFVLAAGFSHFDAGNL-------APSFFPFGAAGVFRAAGVVY 278
Cdd:TIGR00908 124 --AALVFYIVFIGINILGVGEAAKLEFVVTAVAIIALGVFIGAMVPHFDSANLfngpqtgASSFLPGAYVGVFAAIPFAI 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 279 WSYTGFDMVATMAEETKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEI----DANAAYSVAFAAAGMRWARYVV 354
Cdd:TIGR00908 202 WFFLAVEGVAMAAEETKNPKRDIPRGLIGAILTLLALAAGILVVGPGAADAKELmgsnNPLPEALESIYGGSTWMSQFVN 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 355 ALGaLKGMTSGLLVGALGQARYTTQIARTHMIPPYFALVHpTTGTPIYATVAVTLGAACVALFSSLDVLASVSSISTLFI 434
Cdd:TIGR00908 282 LVG-LFGLIASFHGIIYGYSRQIFALSRAGYLPESLSKVN-RKKAPVLAIVVPGVIGFGLSLTGQTALIILVSVFGAIIS 359
                         330
                  ....*....|..
gi 1443083618 435 FALVAVALLVRR 446
Cdd:TIGR00908 360 YVLSMAAHFTLR 371
AA_permease_C pfam13906
C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured ...
517-567 3.63e-15

C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured by the models pfam00324 and pfam13520.


Pssm-ID: 464034  Cd Length: 51  Bit Score: 69.54  E-value: 3.63e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1443083618 517 YGAPLVPWLPAMSIATNLFLMGSLGTAAYARFGICTAAMLVYYVLFGVHAT 567
Cdd:pfam13906   1 FKVPLVPFLPALSILVNIYLMVQLDSLTWIRFGIWMLIGLLIYFGYGIRHS 51
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
68-471 5.53e-15

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 77.47  E-value: 5.53e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGgSFS-YLR 146
Cdd:COG1113     9 EEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIAL-AGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSG-SFSdYAR 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 147 VELGDIAAFLA--------AGNILLEAVVGAAGLGRSWTsylaallgrdtdslriHVPALAegfnlldpIAVVVLVSTSA 218
Cdd:COG1113    87 EYLGPWAGFVTgwlywffwVLVGMAEATAVGIYLQFWFP----------------DVPQWV--------WALVFLVLLTA 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 219 VAMSGARLTSTLNSLASVVGI-AIIAFVLAAG---FSHFDAGNLAPS----------FFPFGAAGVFRAAGVVYWSYTGF 284
Cdd:COG1113   143 INLLSVKLFGEFEFWFALIKVvAIVAFIVVGLlliFFGFGLPGGPPAglsnlwdhggFFPNGIGGVLAALQIVVFAFGGI 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 285 DMVATMAEETKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAA-YSVAFAAAGMRWA----RYVVALGAL 359
Cdd:COG1113   223 ELVGIAAAEAKDPEKTIPKAINSVIWRILLFYVGSLFVILALVPWNQIGAGGSpFVTVFSLLGIPAAagimNFVVLTAAL 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 360 KGMTSGLlvgalgqarYTT-----QIARTHMIPPYFALVHPtTGTPIYATVAVTLGAACVALFSSL------DVLASVSS 428
Cdd:COG1113   303 SSLNSGL---------YSTsrmlySLAERGDAPKFFGKLSK-RGVPVRAILLSAVVLLIGVVLNYLlpekafTFLLSISG 372
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1443083618 429 ISTLFIFALVAVALLV-RRYHVAGATTPGQLRTF---------LAFLALVVLS 471
Cdd:COG1113   373 FGALFVWLMILVSQLKfRRRLPREGAAALKFKMPgfpytsyltLAFLAAVLVL 425
AA_permease pfam00324
Amino acid permease;
80-446 2.66e-14

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 75.43  E-value: 2.66e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  80 DLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGDIAAFLAAG 159
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 160 NILLEAVVGAAgLGRSWTSYLAALLGRDTDSLRIHVPALaegfnlldpIAVVVLVSTSAVAMSGARLTSTLnsLASVVGI 239
Cdd:pfam00324  81 NYWLSWITVLA-LELTAASILIQFWELVPDIPYLWVWGA---------VFLVLLTIINLVGVKWYGEAEFW--FALIKII 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 240 AIIAFVLAAGFSHFDAG------------NLAPSFFPFG-AAGVFRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLGLI 306
Cdd:pfam00324 149 AIIGFIIVGIILLSGGNpndgaifrylgdNGGKNNFPPGfGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAIL 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 307 SSMSSITVVYCLMSLALVGMQRYT-------EIDANAAYSVAFAAAGMRWARYVVALGALKGMTSGLLVGALGQARYTTQ 379
Cdd:pfam00324 229 QVIWRITIFYILSLLAIGLLVPWNdpgllndSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYS 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1443083618 380 IARTHMIPPYFAlVHPTTGTPIYAtVAVTLGAACVALFSSL-------DVLASVSSISTLFIFALVAVALLVRR 446
Cdd:pfam00324 309 LARDGLAPKFLK-KVDKRGVPLRA-ILVSMVISLLALLLASlnpaivfNFLLAISGLSGLIVWGLISLSHLRFR 380
PRK10644 PRK10644
arginine/agmatine antiporter;
87-465 7.21e-11

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 64.43  E-value: 7.21e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  87 GSVVGSGVFVLTGQEARfdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGDIAAFLAAGNILLEAV 166
Cdd:PRK10644   21 GNIMGSGVFLLPANLAS--TGGIAIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACW 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 167 VGAAGL---GRSWTSYLAALLgRDTDSLRIHVPALAEGFNLLDPIAVVVLVSTSAVAMSGArltstlnsLASVVGIAIIA 243
Cdd:PRK10644   99 IGNIAMvviGVGYLSYFFPIL-KDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLA--------LIPIVGIAVFG 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 244 FVLAAGFSHFDAGNLApSFFPFGAAGvfRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLGLISSMSSITVVYCLMSLAL 323
Cdd:PRK10644  170 WFWFRGETYMAAWNVS-GLGTFGAIQ--STLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAI 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 324 VGMQRYTEIDANAAYSVAFAAAGM-RWARYVVA-------LGALKGMTsgLLVGALGQAryttqIARTHMIPPYFALVHp 395
Cdd:PRK10644  247 MGMIPNAALRVSASPFGDAARMALgDTAGAIVSfcaaagcLGSLGGWT--LLAGQTAKA-----AADDGLFPPIFARVN- 318
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1443083618 396 TTGTPIyATVAVTLGAACVALFSSL--------DVLASVSSISTLFIFALVAVALLVRRY-HVAGATTPGQLRTFLAFL 465
Cdd:PRK10644  319 KAGTPV-AGLLIVGVLMTIFQLSSIspnaskefGLVSSVSVIFTLVPYLYTCAALLLLGHgHFGKARPAYLAVTLIAFV 396
PRK10238 PRK10238
aromatic amino acid transporter AroP;
72-335 2.56e-08

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 56.50  E-value: 2.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  72 LRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARfDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGgSFSYLRVEL-G 150
Cdd:PRK10238   10 LKRGLKNRHIQLIALGGAIGTGLFLGSASVIQ-SAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAG-SFSHFAYKYwG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 151 DIAAFLAAGNI-LLEAVVGAAGLgrswtsylaALLGRDTDSLRIHVPALAEgfnlldpiAVVVLVSTSAVAMSGARLTST 229
Cdd:PRK10238   88 SFAGFASGWNYwVLYVLVAMAEL---------TAVGKYIQFWYPEIPTWVS--------AAVFFVVINAINLTNVKVFGE 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 230 LNSLASVVG-IAIIAFVLAAGFSHFdAGNLAPS-----------FFPFGAAGVFRAAGVVYWSYTGFDMVATMAEETKNP 297
Cdd:PRK10238  151 MEFWFAIIKvIAVVAMIIFGGWLLF-SGNGGPQatvsnlwdqggFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNP 229
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1443083618 298 GRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDAN 335
Cdd:PRK10238  230 EQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTAD 267
PRK11021 PRK11021
putative transporter; Provisional
208-415 1.70e-06

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 50.68  E-value: 1.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 208 IAVVVLVSTSAVAMSGarltstlnSLASVVGIAIIAFVLAAgfshFDAGNLAPSFFPFGA------AGVFRAAGVVYWSY 281
Cdd:PRK11021  123 LALLWLLNLRGASSSA--------NLQTVIALLIVALVVAI----WWAGDIKPADIPFPApgsiewSGLFAALGVMFWCF 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 282 TGFDMVATMAEETKNPGRDVPLGLISSMSSITVVYCLMSLALVGMQRYTEIDANAAY--SVAFAAAGMRWARYVVALGAL 359
Cdd:PRK11021  191 VGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASlpGIFVQLFGGYALWVICVIGYL 270
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1443083618 360 KGMTSgLLVGALGQARYTTQIARTHMIPPYFALVHPtTGTPIYATVAVtlGAACVA 415
Cdd:PRK11021  271 ACFAS-VNIYTQSFARLVWSQAREGRPPSYLARLSA-RGVPVNALNAV--LGCCAV 322
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
68-302 2.02e-05

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 47.47  E-value: 2.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGqEARFDAGP--AIpLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYL 145
Cdd:COG0833     6 KQNKLKRGLKSRHLSMIALGGVIGTGLFLASG-YTISQAGPggAL-LAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 146 RVELGDIAAFLAAGN------ILLEAVVGAAGL----------GRSWTSYLAALLgrdTDSLRIHVPALAEG---FNLLD 206
Cdd:COG0833    84 TRFIDPAFGFAVGWNywlnwaITVAAELTAAGIimqywfpdvpVWIWSLLFLALI---FLLNALSVKAFGESefwFSLIK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 207 PIAVVVLVstsavamsgarltstlnslasVVGIAIIAFVL---AAGFSHFDAGNlapSFFPFGAAGVFRAAGVVYWSYTG 283
Cdd:COG0833   161 VITVIAFI---------------------IVGLLMIFGIIgghAPGFSNFTTGD---GPFPGGFLAILGVMMIVGFSFQG 216
                         250
                  ....*....|....*....
gi 1443083618 284 FDMVATMAEETKNPGRDVP 302
Cdd:COG0833   217 TELIGIAAGESENPEKTIP 235
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
129-439 3.32e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 43.58  E-value: 3.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 129 AELATEIPSAGGSFSYLRVELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAALL---------GRDTDSLRIHVPALA 199
Cdd:TIGR00907  68 AELSSAYPTSGGQYFWSAKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSVAQLIlgivslttpGREYIPTRWHIFGIM 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 200 EGFNLLD------PIAVVVLVSTSAVamsgarltstLNSLASVVGIAIIAFVLAAG--------FSHFDAGNLAPSffPF 265
Cdd:TIGR00907 148 IGIHLIHalinslPTKWLPRITSSAA----------YWSLLGFLTICITLLACKSPkfndgkfvFTNFNNSTGGWK--PG 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 266 GAAGVFRAAGVVyWSYTGFDMVATMAEETKNPGRDVPLGLISSMS-SITVVYCLMSLALVGMQrytEIDANAAYSVAFAA 344
Cdd:TIGR00907 216 GFAFLLGLLNPA-WSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAiGIVTGFCFNIVLFFSMG---DIDSLISSTTGQPI 291
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 345 AGMrwarYVVALGALKGMTSGLLVGAL-----------GQARYTTQIARTHMIP--PYFALVHPTTGTPIyatVAVTLGA 411
Cdd:TIGR00907 292 AQI----FYNALGNKAGAIFLLCLILVtsffcaitcmtANSRMIYAFSRDGGLPfsPLWSRVNPRTQVPL---NAVWLSA 364
                         330       340
                  ....*....|....*....|....*...
gi 1443083618 412 ACVALFsSLDVLASVSSISTLFIFALVA 439
Cdd:TIGR00907 365 VWIILI-GLLGLGSSTAFQAIFSVCTVA 391
proY PRK10580
putative proline-specific permease; Provisional
68-316 1.07e-03

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 41.73  E-value: 1.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRV 147
Cdd:PRK10580    3 SKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKM-AGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 148 ELGDIAAFLAAGNILLEAVVGAAGLGRSWTSYLAallgrdtdslrIHVPALAEGFNLLDpiavVVLVsTSAVAMSGARLT 227
Cdd:PRK10580   82 NLGPLAGYITGWTYCFEILIVAIADVTAFGIYMG-----------VWFPTVPHWIWVLS----VVLI-ICAVNLMSVKVF 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 228 STLNSLASVVGIAIIAFVLAAGFSHFDAG-----------NLAPS--FFPFGAAGVFRAAGVVYWSYTGFDMVATMAEET 294
Cdd:PRK10580  146 GELEFWFSFFKVATIIIMIVAGIGIIIWGignggqptgihNLWSNggFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEA 225
                         250       260
                  ....*....|....*....|..
gi 1443083618 295 KNPGRDVPLGLISSMSSITVVY 316
Cdd:PRK10580  226 KDPEKSIPRAINSVPMRILVFY 247
PRK11387 PRK11387
S-methylmethionine permease;
68-458 1.22e-03

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 41.76  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  68 SENPLRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRV 147
Cdd:PRK11387    8 QAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAAR 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 148 ELGDIAAFLAAGNILLEAVVGaagLGRSWTS--------------------YLAALLGRDTDSLRIhvpaLAEG---FNL 204
Cdd:PRK11387   88 YLGPATGYTVAWLYWLTWTVA---LGSSLTAagfcmqywfpqvpvwpwcllFCALIFGLNVVSTRF----FAEGefwFSL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 205 LDPIAVVVLVSTSAVAMSGArltstlnslasvvgIAIIAFVLAAGFSHFDAGnlapSFFPFGAAGVFRAAGVVYWSYTGF 284
Cdd:PRK11387  161 IKVVTILAFIVLGGAAIFGF--------------IPMQDGSPAPGLRNLTAE----GWFPHGGLPILMTMVAVNFAFSGT 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 285 DMVATMAEETKNPGRDVPLGLISSMSSITVVY---CLMSLALVGMQRYTEIDAnaAYSVAFAAAGMRWARYVVALGALKG 361
Cdd:PRK11387  223 ELIGIAAGETENPAKVIPVAIRTTIARLVIFFvgtVLVLAALIPMQQAGVEKS--PFVLVFEKVGIPYAADIFNFVILTA 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 362 MTSGLLVGALGQARYTTQIARTHMIPPYFALVHpTTGTPIYATVAVTLGAAcVALFSSL----DVLASVSSISTlfiFAL 437
Cdd:PRK11387  301 ILSAANSGLYASGRMLWSLSNEGTLPACFARLT-KRGIPLTALSVSMLGGL-LALFSSVvapdTVFVALSAISG---FAV 375
                         410       420
                  ....*....|....*....|....*...
gi 1443083618 438 VAVALLV-------RRYHVAGATTPGQL 458
Cdd:PRK11387  376 VAVWLSIcashfmfRRRHLRDGKALSEL 403
PRK15049 PRK15049
L-asparagine permease;
84-316 7.72e-03

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 39.22  E-value: 7.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618  84 LGFGSVVGSGVFVLTGQEARFdAGPAIPLAYAAAGFSALLSSFCYAELATEIPSAGGSFSYLRVELGDIAAFLAA----- 158
Cdd:PRK15049   38 IAIGGAIGTGLFLGAGARLQM-AGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGwmyfi 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 159 -----GNILLEAVV------GAAGLGRSWTSYLAALLGRDTDSLrIHVPALAE---GFNLLDPIAVVVLVSTSAVAMSGA 224
Cdd:PRK15049  117 nwamtGIVDITAVAlymhywGAFGGVPQWVFALAALTIVGTMNM-IGVKWFAEmefWFALIKVLAIVTFLVVGTVFLGSG 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1443083618 225 RLTStlnslASVVGIAIIAfvlaagfshfDAGnlapSFFPFGAAGVFRAAGVVYWSYTGFDMVATMAEETKNPGRDVPLG 304
Cdd:PRK15049  196 QPLD-----GNTTGFHLIT----------DNG----GFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKA 256
                         250
                  ....*....|..
gi 1443083618 305 LISSMSSITVVY 316
Cdd:PRK15049  257 INSVIWRIGLFY 268
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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