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Concise Results
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small optic lobes homolog [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
476-791
4.22e-120
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 371.66
E-value: 4.22e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 476 NIVAF C RENN V S F V D DS FPP GPE S V GF P -- AGDSVQQR V RQ W L RP Q EI NCSVFRDHR at WSVFHTLR PSD IL QG L LG N CW 553
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSNP -- RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 554 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G C L LFSQAQ R KQ LWVAL I EKA L A 630
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 631 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QLSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dds A YES 710
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 711 L GL RPR HAYS I LDVR D VQ -- G T RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R GE L MPH G SSE G V FWM EYG DF V R Y FD S 786
Cdd:cd00044 231 N GL VKG HAYS V LDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 14336701 787 VDI C K 791
Cdd:cd00044 311 LYV C N 315
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
2.76e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.84
E-value: 2.76e-04
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
414-438
5.71e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.07
E-value: 5.71e-04
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
145-169
9.32e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 37.68
E-value: 9.32e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
344-367
8.04e-03
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 35.02
E-value: 8.04e-03
PRK07764 super family
cl35613 DNA polymerase III subunits gamma and tau; Validated
73-295
9.61e-03
DNA polymerase III subunits gamma and tau; Validated
PRK07764 :Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 39.97
E-value: 9.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 73 PAPG A AFLPVLNGVLPK PP AILGE P KGSCQEE A GPVRTAGLV A TE PA RGQCEDKDEEEKE E QEEEEG A AEP -- R GG WAC P 150
Cdd:PRK07764 591 APGA A GGEGPPAPASSG PP EEAAR P AAPAAPA A PAAPAPAGA A AA PA EASAAPAPGVAAP E HHPKHV A VPD as D GG DGW P 670
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 151 RCTLHNT P V A SSCSVCGGPRRLSLPRI P PEALVV P EVVA PAG f HVVPA A PP P GLPGE GA E A NP PA TSQGPAAE PEP PRV P 230
Cdd:PRK07764 671 AKAGGAA P A A PPPAPAPAAPAAPAGAA P AQPAPA P AATP PAG - QADDP A AQ P PQAAQ GA S A PS PA ADDPVPLP PEP DDP P 749
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14336701 231 PFSPFSSTLQNN P V P RSRREVPPQLQ P PV P EAAQPSPSAGCRGAP ---- QGSGWAGASR L A E L L SG K RL 295
Cdd:PRK07764 750 DPAGAPAQPPPP P A P APAAAPAAAPP P SP P SEEEEMAEDDAPSMD dedr RDAEEVAMEL L E E E L GA K KI 818
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
9.75e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.60
E-value: 9.75e-03
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
476-791
4.22e-120
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 371.66
E-value: 4.22e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 476 NIVAF C RENN V S F V D DS FPP GPE S V GF P -- AGDSVQQR V RQ W L RP Q EI NCSVFRDHR at WSVFHTLR PSD IL QG L LG N CW 553
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSNP -- RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 554 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G C L LFSQAQ R KQ LWVAL I EKA L A 630
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 631 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QLSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dds A YES 710
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 711 L GL RPR HAYS I LDVR D VQ -- G T RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R GE L MPH G SSE G V FWM EYG DF V R Y FD S 786
Cdd:cd00044 231 N GL VKG HAYS V LDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 14336701 787 VDI C K 791
Cdd:cd00044 311 LYV C N 315
Peptidase_C2
pfam00648 Calpain family cysteine protease;
488-791
9.96e-114
Calpain family cysteine protease;
Pssm-ID: 459889 [Multi-domain]
Cd Length: 295
Bit Score: 354.12
E-value: 9.96e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 488 F V D DS FP PGPE S V G F P AGDSVQQR V r Q W L RP Q EI NCS - V F RDHR A T wsvfhtlr PS DI L QG L LG N CW F L S A L A V L AER P D 566
Cdd:pfam00648 1 F E D PE FP ADDS S L G Y P PSPPPPRG V - E W K RP K EI CSN p Q F IVDG A S -------- RF DI C QG E LG D CW L L A A I A S L TLN P K 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 567 L V ERV MVTR --- SLCAE G AYQV R LCKD G T W TT V LV DD M LP C d EA G C LLF SQ - AQRKQL W V AL I EKA L AKLHGSY F AL QA G 642
Cdd:pfam00648 72 L L ERV VPPD qsf EENYA G IFHF R FWRF G E W VD V VI DD R LP T - RN G K LLF VH s RDKNEF W S AL L EKA Y AKLHGSY E AL KG G 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 643 RAI E G L ATL TG APC ES LA L QLSST N preepvdtdl IWAKM L SSK E A G F LMG A S CGGGNMK v DDS A YESL GL RPR HAYS IL 722
Cdd:pfam00648 151 STS E A L EDF TG GVA ES YD L KEPPP N ---------- LFEIL L KAL E R G S LMG C S IDATSAA - EEE A RTPN GL VKG HAYS VT 219
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14336701 723 D VR D V ---- QGT RL L RLRNPWG RFS WNG S WSD EW P H W --- PGHLRG EL MPHGSSE G V FWM EYG DF VR YF DSVD IC K 791
Cdd:pfam00648 220 G VR K V nlkg GKV RL I RLRNPWG EVE WNG A WSD GS P E W qtv SPEEKE EL GLTKKDD G E FWM SFE DF LK YF TDLE IC N 295
CysPc
smart00230 Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). ...
474-801
7.17e-113
Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Pssm-ID: 128526
Cd Length: 318
Bit Score: 352.78
E-value: 7.17e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 474 W E NIVAF C R E NNVS F V D DS FP PGPE S VG F pag DSV Q QRVRQ W L RP Q EI NCS vfrdhr ATWS V F h TLRPS DI L QG L LG N CW 553
Cdd:smart00230 1 Y E ALRQY C K E SGTL F E D PL FP ANNG S LF F --- SQR Q RKFVV W K RP H EI FEN ------ PPFI V G - GASRT DI C QG V LG D CW 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 554 F L S ALA V L AE R PD L VE RV MV - TRSLCAE -- G AYQV R LCKD G T W TT V LV DD M LP CDEAGCLLFSQAQ R KQL W V AL I EKA L A 630
Cdd:smart00230 71 L L A ALA S L TL R EK L LD RV IP h DQEFSEN ya G IFHF R FWRF G K W VD V VI DD R LP TYNGELVFMHSNS R NEF W S AL L EKA Y A 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 631 KL H G S Y F AL QA G RAI E G L AT LTG APC ES LA L Q lsstnpr E EPV D T D LIWAKMLSSK E A G F LMG A S C G G G N m K V DDSAYES 710
Cdd:smart00230 151 KL N G C Y E AL KG G STT E A L ED LTG GVA ES ID L K ------- E ASK D P D NLFEDLFKAF E R G S LMG C S I G A G T - A V EEEEQKD 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 711 L GL RPR HAYS IL DVR D VQG T R -- LLRLRNPWG RFS WNG S WSD EW P H W --- PGHLRGE L MPHGSSE G V FWM EYG DF V R Y FD 785
Cdd:smart00230 223 C GL VKG HAYS VT DVR E VQG R R qe LLRLRNPWG QVE WNG P WSD DS P E W rsv SASEKKN L GLTFDDD G E FWM SFE DF L R H FD 302
330
....*....|....*.
gi 14336701 786 S V D IC KVHS D WQ E A R V 801
Cdd:smart00230 303 K V E IC NLNP D SL E E R S 318
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
2.76e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.84
E-value: 2.76e-04
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
414-438
5.71e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.07
E-value: 5.71e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
412-438
5.88e-04
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 38.10
E-value: 5.88e-04
10 20
....*....|....*....|....*..
gi 14336701 412 R P G Q W A C PA C TLL N ALRAKH C A AC HT P 438
Cdd:pfam00641 1 R E G D W D C SK C LVQ N FATSTK C V AC QA P 27
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
145-169
9.32e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 37.68
E-value: 9.32e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
344-367
8.04e-03
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 35.02
E-value: 8.04e-03
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
73-295
9.61e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 39.97
E-value: 9.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 73 PAPG A AFLPVLNGVLPK PP AILGE P KGSCQEE A GPVRTAGLV A TE PA RGQCEDKDEEEKE E QEEEEG A AEP -- R GG WAC P 150
Cdd:PRK07764 591 APGA A GGEGPPAPASSG PP EEAAR P AAPAAPA A PAAPAPAGA A AA PA EASAAPAPGVAAP E HHPKHV A VPD as D GG DGW P 670
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 151 RCTLHNT P V A SSCSVCGGPRRLSLPRI P PEALVV P EVVA PAG f HVVPA A PP P GLPGE GA E A NP PA TSQGPAAE PEP PRV P 230
Cdd:PRK07764 671 AKAGGAA P A A PPPAPAPAAPAAPAGAA P AQPAPA P AATP PAG - QADDP A AQ P PQAAQ GA S A PS PA ADDPVPLP PEP DDP P 749
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14336701 231 PFSPFSSTLQNN P V P RSRREVPPQLQ P PV P EAAQPSPSAGCRGAP ---- QGSGWAGASR L A E L L SG K RL 295
Cdd:PRK07764 750 DPAGAPAQPPPP P A P APAAAPAAAPP P SP P SEEEEMAEDDAPSMD dedr RDAEEVAMEL L E E E L GA K KI 818
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
9.75e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.60
E-value: 9.75e-03
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
476-791
4.22e-120
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 371.66
E-value: 4.22e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 476 NIVAF C RENN V S F V D DS FPP GPE S V GF P -- AGDSVQQR V RQ W L RP Q EI NCSVFRDHR at WSVFHTLR PSD IL QG L LG N CW 553
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSNP -- RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 554 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G C L LFSQAQ R KQ LWVAL I EKA L A 630
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 631 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QLSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dds A YES 710
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 711 L GL RPR HAYS I LDVR D VQ -- G T RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R GE L MPH G SSE G V FWM EYG DF V R Y FD S 786
Cdd:cd00044 231 N GL VKG HAYS V LDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 14336701 787 VDI C K 791
Cdd:cd00044 311 LYV C N 315
Peptidase_C2
pfam00648 Calpain family cysteine protease;
488-791
9.96e-114
Calpain family cysteine protease;
Pssm-ID: 459889 [Multi-domain]
Cd Length: 295
Bit Score: 354.12
E-value: 9.96e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 488 F V D DS FP PGPE S V G F P AGDSVQQR V r Q W L RP Q EI NCS - V F RDHR A T wsvfhtlr PS DI L QG L LG N CW F L S A L A V L AER P D 566
Cdd:pfam00648 1 F E D PE FP ADDS S L G Y P PSPPPPRG V - E W K RP K EI CSN p Q F IVDG A S -------- RF DI C QG E LG D CW L L A A I A S L TLN P K 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 567 L V ERV MVTR --- SLCAE G AYQV R LCKD G T W TT V LV DD M LP C d EA G C LLF SQ - AQRKQL W V AL I EKA L AKLHGSY F AL QA G 642
Cdd:pfam00648 72 L L ERV VPPD qsf EENYA G IFHF R FWRF G E W VD V VI DD R LP T - RN G K LLF VH s RDKNEF W S AL L EKA Y AKLHGSY E AL KG G 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 643 RAI E G L ATL TG APC ES LA L QLSST N preepvdtdl IWAKM L SSK E A G F LMG A S CGGGNMK v DDS A YESL GL RPR HAYS IL 722
Cdd:pfam00648 151 STS E A L EDF TG GVA ES YD L KEPPP N ---------- LFEIL L KAL E R G S LMG C S IDATSAA - EEE A RTPN GL VKG HAYS VT 219
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14336701 723 D VR D V ---- QGT RL L RLRNPWG RFS WNG S WSD EW P H W --- PGHLRG EL MPHGSSE G V FWM EYG DF VR YF DSVD IC K 791
Cdd:pfam00648 220 G VR K V nlkg GKV RL I RLRNPWG EVE WNG A WSD GS P E W qtv SPEEKE EL GLTKKDD G E FWM SFE DF LK YF TDLE IC N 295
CysPc
smart00230 Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). ...
474-801
7.17e-113
Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Pssm-ID: 128526
Cd Length: 318
Bit Score: 352.78
E-value: 7.17e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 474 W E NIVAF C R E NNVS F V D DS FP PGPE S VG F pag DSV Q QRVRQ W L RP Q EI NCS vfrdhr ATWS V F h TLRPS DI L QG L LG N CW 553
Cdd:smart00230 1 Y E ALRQY C K E SGTL F E D PL FP ANNG S LF F --- SQR Q RKFVV W K RP H EI FEN ------ PPFI V G - GASRT DI C QG V LG D CW 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 554 F L S ALA V L AE R PD L VE RV MV - TRSLCAE -- G AYQV R LCKD G T W TT V LV DD M LP CDEAGCLLFSQAQ R KQL W V AL I EKA L A 630
Cdd:smart00230 71 L L A ALA S L TL R EK L LD RV IP h DQEFSEN ya G IFHF R FWRF G K W VD V VI DD R LP TYNGELVFMHSNS R NEF W S AL L EKA Y A 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 631 KL H G S Y F AL QA G RAI E G L AT LTG APC ES LA L Q lsstnpr E EPV D T D LIWAKMLSSK E A G F LMG A S C G G G N m K V DDSAYES 710
Cdd:smart00230 151 KL N G C Y E AL KG G STT E A L ED LTG GVA ES ID L K ------- E ASK D P D NLFEDLFKAF E R G S LMG C S I G A G T - A V EEEEQKD 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 711 L GL RPR HAYS IL DVR D VQG T R -- LLRLRNPWG RFS WNG S WSD EW P H W --- PGHLRGE L MPHGSSE G V FWM EYG DF V R Y FD 785
Cdd:smart00230 223 C GL VKG HAYS VT DVR E VQG R R qe LLRLRNPWG QVE WNG P WSD DS P E W rsv SASEKKN L GLTFDDD G E FWM SFE DF L R H FD 302
330
....*....|....*.
gi 14336701 786 S V D IC KVHS D WQ E A R V 801
Cdd:smart00230 303 K V E IC NLNP D SL E E R S 318
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
2.76e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.84
E-value: 2.76e-04
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
414-438
5.71e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 38.07
E-value: 5.71e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
412-438
5.88e-04
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 38.10
E-value: 5.88e-04
10 20
....*....|....*....|....*..
gi 14336701 412 R P G Q W A C PA C TLL N ALRAKH C A AC HT P 438
Cdd:pfam00641 1 R E G D W D C SK C LVQ N FATSTK C V AC QA P 27
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
145-169
9.32e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 37.68
E-value: 9.32e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
344-367
8.04e-03
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 35.02
E-value: 8.04e-03
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
73-295
9.61e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 39.97
E-value: 9.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 73 PAPG A AFLPVLNGVLPK PP AILGE P KGSCQEE A GPVRTAGLV A TE PA RGQCEDKDEEEKE E QEEEEG A AEP -- R GG WAC P 150
Cdd:PRK07764 591 APGA A GGEGPPAPASSG PP EEAAR P AAPAAPA A PAAPAPAGA A AA PA EASAAPAPGVAAP E HHPKHV A VPD as D GG DGW P 670
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14336701 151 RCTLHNT P V A SSCSVCGGPRRLSLPRI P PEALVV P EVVA PAG f HVVPA A PP P GLPGE GA E A NP PA TSQGPAAE PEP PRV P 230
Cdd:PRK07764 671 AKAGGAA P A A PPPAPAPAAPAAPAGAA P AQPAPA P AATP PAG - QADDP A AQ P PQAAQ GA S A PS PA ADDPVPLP PEP DDP P 749
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14336701 231 PFSPFSSTLQNN P V P RSRREVPPQLQ P PV P EAAQPSPSAGCRGAP ---- QGSGWAGASR L A E L L SG K RL 295
Cdd:PRK07764 750 DPAGAPAQPPPP P A P APAAAPAAAPP P SP P SEEEEMAEDDAPSMD dedr RDAEEVAMEL L E E E L GA K KI 818
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
9.75e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.60
E-value: 9.75e-03
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
