NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1423606994|gb|AXB83335|]
View 

GTP cyclohydrolase [Megasphaera hexanoica]

Protein Classification

GTP cyclohydrolase I( domain architecture ID 10001019)

GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate

EC:  3.5.4.16
Gene Symbol:  folE
PubMed:  12559918|10737935
SCOP:  4001710

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
FolE COG0302
GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the ...
9-176 3.88e-67

GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the Pathway/BioSystem: Folate biosynthesis


:

Pssm-ID: 440071 [Multi-domain]  Cd Length: 186  Bit Score: 203.40  E-value: 3.88e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFF 88
Cdd:COG0302     6 EEIEAAVREILEALGEDPDREGLLDTPKRVAKAYEELFSGYDQDPAEVLNTTFEEGYDEMVLVKDIEFYSMCEHHLLPFF 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  89 GIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRnhlG---GDSDI 165
Cdd:COG0302    86 GKAHVAYIP-NGKVVGLSKLARLVDVFARRPQVQERLTAQIADALQEVLGPRGVAVVIEAEHMCMTMR---GvrkPGSST 161
                         170
                  ....*....|.
gi 1423606994 166 ITQAGLGCLAD 176
Cdd:COG0302   162 VTSAMRGVFRE 172
 
Name Accession Description Interval E-value
FolE COG0302
GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the ...
9-176 3.88e-67

GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440071 [Multi-domain]  Cd Length: 186  Bit Score: 203.40  E-value: 3.88e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFF 88
Cdd:COG0302     6 EEIEAAVREILEALGEDPDREGLLDTPKRVAKAYEELFSGYDQDPAEVLNTTFEEGYDEMVLVKDIEFYSMCEHHLLPFF 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  89 GIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRnhlG---GDSDI 165
Cdd:COG0302    86 GKAHVAYIP-NGKVVGLSKLARLVDVFARRPQVQERLTAQIADALQEVLGPRGVAVVIEAEHMCMTMR---GvrkPGSST 161
                         170
                  ....*....|.
gi 1423606994 166 ITQAGLGCLAD 176
Cdd:COG0302   162 VTSAMRGVFRE 172
GTP_cyclohydroI pfam01227
GTP cyclohydrolase I; This family includes GTP cyclohydrolase enzymes and a family of related ...
9-173 7.69e-59

GTP cyclohydrolase I; This family includes GTP cyclohydrolase enzymes and a family of related bacterial proteins.


Pssm-ID: 426139 [Multi-domain]  Cd Length: 176  Bit Score: 181.96  E-value: 7.69e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQaagDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFF 88
Cdd:pfam01227   2 EEAVR---EILEAIGEDPDREGLLETPKRVAKMYEELFSGYHEDPEKVLKATFEEGYDEMVLVKDIEFYSMCEHHLLPFF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  89 GIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQ 168
Cdd:pfam01227  79 GKAHVAYIP-NGKVIGLSKIARIVDIFARRLQVQERLTAQIADALQEILKPRGVAVVIEAEHLCMTMRGVRKPGSKTVTS 157

                  ....*
gi 1423606994 169 AGLGC 173
Cdd:pfam01227 158 AFRGV 162
folE PRK09347
GTP cyclohydrolase I; Provisional
9-176 2.80e-58

GTP cyclohydrolase I; Provisional


Pssm-ID: 236472 [Multi-domain]  Cd Length: 188  Bit Score: 181.13  E-value: 2.80e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS--DGLVAVRNIRFYSMCEHHLLP 86
Cdd:PRK09347    6 EKIEEAVREILEALGEDPDREGLLDTPKRVAKMYEELFSGYANDPKEVLNKTFEEEMgyDEMVLVKDITFYSMCEHHLLP 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  87 FFGIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDII 166
Cdd:PRK09347   86 FIGKAHVAYIP-KGKVIGLSKIARIVDFFARRPQVQERLTAQIADALQEILGPRGVAVVIEAEHMCMTMRGVRKPGSKTV 164
                         170
                  ....*....|
gi 1423606994 167 TQAGLGCLAD 176
Cdd:PRK09347  165 TSALRGLFKT 174
GTP_cyclohydro1 cd00642
GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin ...
9-188 6.17e-47

GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In vertebrates and insects it is the biosynthtic precursor of tetrahydrobiopterin (BH4) which is involved in the formation of catacholamines, nitric oxide, and the stimulation of T lymphocytes. The biosynthetic reaction of BH4 is controlled by a regulatory protein GFRP which mediates feedback inhibition of GTP-CH-I by BH4. This inhibition is reversed by phenylalanine. The decameric GTP-CH-I forms a complex with two pentameric GFRP in the presence of phenylalanine or a combination of GTP and BH4, respectively.


Pssm-ID: 238349 [Multi-domain]  Cd Length: 185  Bit Score: 152.15  E-value: 6.17e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS-DGLVAVRNIRFYSMCEHHLLPF 87
Cdd:cd00642     4 EKIAAAVREILELLGEDPNREGLLETPERVAKAYQEITSGYDQALNDPKNTAIFDEDhDEMVIVKDITLFSMCEHHLVPF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  88 FGIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIIT 167
Cdd:cd00642    84 YGKVHIAYIP-KDKVIGLSKLARIVEFFSRRLQVQERLTKQIAVAIQEILGPQGVAVVIEATHMCMVMRGVRKPGSKTVT 162
                         170       180
                  ....*....|....*....|.
gi 1423606994 168 QAGLGCLADGTDAGHQAWKLL 188
Cdd:cd00642   163 SAMLGVFKEDPKTREEFLRLI 183
folE TIGR00063
GTP cyclohydrolase I; alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) ...
13-188 1.62e-46

GTP cyclohydrolase I; alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 129173 [Multi-domain]  Cd Length: 180  Bit Score: 151.06  E-value: 1.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  13 QAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS-DGLVAVRNIRFYSMCEHHLLPFFGIV 91
Cdd:TIGR00063   3 GAMREILELIGEDLNREGLLETPKRVAKMYVEIFSGYDYANFPKITLAIFQEKhDEMVLVRDITFTSTCEHHLVPFDGKA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  92 HIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQAGL 171
Cdd:TIGR00063  83 HVAYIP-KDKVIGLSKIARIVEFFARRPQVQERLTQQIAEALQEILEPNGVAVVVEATHMCMKMRGIRKPGSATVTSALG 161
                         170
                  ....*....|....*..
gi 1423606994 172 GCLADGTDAGHQAWKLL 188
Cdd:TIGR00063 162 GLFKSDQKTRAEFLRLV 178
 
Name Accession Description Interval E-value
FolE COG0302
GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the ...
9-176 3.88e-67

GTP cyclohydrolase I [Coenzyme transport and metabolism]; GTP cyclohydrolase I is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440071 [Multi-domain]  Cd Length: 186  Bit Score: 203.40  E-value: 3.88e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFF 88
Cdd:COG0302     6 EEIEAAVREILEALGEDPDREGLLDTPKRVAKAYEELFSGYDQDPAEVLNTTFEEGYDEMVLVKDIEFYSMCEHHLLPFF 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  89 GIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRnhlG---GDSDI 165
Cdd:COG0302    86 GKAHVAYIP-NGKVVGLSKLARLVDVFARRPQVQERLTAQIADALQEVLGPRGVAVVIEAEHMCMTMR---GvrkPGSST 161
                         170
                  ....*....|.
gi 1423606994 166 ITQAGLGCLAD 176
Cdd:COG0302   162 VTSAMRGVFRE 172
GTP_cyclohydroI pfam01227
GTP cyclohydrolase I; This family includes GTP cyclohydrolase enzymes and a family of related ...
9-173 7.69e-59

GTP cyclohydrolase I; This family includes GTP cyclohydrolase enzymes and a family of related bacterial proteins.


Pssm-ID: 426139 [Multi-domain]  Cd Length: 176  Bit Score: 181.96  E-value: 7.69e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQaagDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFF 88
Cdd:pfam01227   2 EEAVR---EILEAIGEDPDREGLLETPKRVAKMYEELFSGYHEDPEKVLKATFEEGYDEMVLVKDIEFYSMCEHHLLPFF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  89 GIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQ 168
Cdd:pfam01227  79 GKAHVAYIP-NGKVIGLSKIARIVDIFARRLQVQERLTAQIADALQEILKPRGVAVVIEAEHLCMTMRGVRKPGSKTVTS 157

                  ....*
gi 1423606994 169 AGLGC 173
Cdd:pfam01227 158 AFRGV 162
folE PRK09347
GTP cyclohydrolase I; Provisional
9-176 2.80e-58

GTP cyclohydrolase I; Provisional


Pssm-ID: 236472 [Multi-domain]  Cd Length: 188  Bit Score: 181.13  E-value: 2.80e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS--DGLVAVRNIRFYSMCEHHLLP 86
Cdd:PRK09347    6 EKIEEAVREILEALGEDPDREGLLDTPKRVAKMYEELFSGYANDPKEVLNKTFEEEMgyDEMVLVKDITFYSMCEHHLLP 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  87 FFGIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDII 166
Cdd:PRK09347   86 FIGKAHVAYIP-KGKVIGLSKIARIVDFFARRPQVQERLTAQIADALQEILGPRGVAVVIEAEHMCMTMRGVRKPGSKTV 164
                         170
                  ....*....|
gi 1423606994 167 TQAGLGCLAD 176
Cdd:PRK09347  165 TSALRGLFKT 174
PRK12606 PRK12606
GTP cyclohydrolase I; Reviewed
13-188 7.47e-50

GTP cyclohydrolase I; Reviewed


Pssm-ID: 237149  Cd Length: 201  Bit Score: 160.30  E-value: 7.47e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  13 QAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQSDGLVAVRNIRFYSMCEHHLLPFFGIVH 92
Cdd:PRK12606   24 AAVRELLEALGEDPDREGLLDTPQRVAKAMQYLCDGYEQDPAEALGALFDSDNDEMVIVRDIELYSLCEHHLLPFIGVAH 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  93 IAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQAGLG 172
Cdd:PRK12606  104 VAYLP-GGKVLGLSKIARIVDMFARRLQIQENLTRQIATAVVTVTQARGAAVVIEAEHLCMMMRGVRKQNSRMITSVMLG 182
                         170
                  ....*....|....*.
gi 1423606994 173 CLADGTDAGHQAWKLL 188
Cdd:PRK12606  183 AFRDSAQTRNEFLRLI 198
GTP_cyclohydro1 cd00642
GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin ...
9-188 6.17e-47

GTP cyclohydrolase I (GTP-CH-I) catalyzes the conversion of GTP into dihydroneopterin triphosphate. The enzyme product is the precursor of tetrahydrofolate in eubacteria, fungi, and plants and of the folate analogs in methanogenic bacteria. In vertebrates and insects it is the biosynthtic precursor of tetrahydrobiopterin (BH4) which is involved in the formation of catacholamines, nitric oxide, and the stimulation of T lymphocytes. The biosynthetic reaction of BH4 is controlled by a regulatory protein GFRP which mediates feedback inhibition of GTP-CH-I by BH4. This inhibition is reversed by phenylalanine. The decameric GTP-CH-I forms a complex with two pentameric GFRP in the presence of phenylalanine or a combination of GTP and BH4, respectively.


Pssm-ID: 238349 [Multi-domain]  Cd Length: 185  Bit Score: 152.15  E-value: 6.17e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   9 EKAVQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS-DGLVAVRNIRFYSMCEHHLLPF 87
Cdd:cd00642     4 EKIAAAVREILELLGEDPNREGLLETPERVAKAYQEITSGYDQALNDPKNTAIFDEDhDEMVIVKDITLFSMCEHHLVPF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  88 FGIVHIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIIT 167
Cdd:cd00642    84 YGKVHIAYIP-KDKVIGLSKLARIVEFFSRRLQVQERLTKQIAVAIQEILGPQGVAVVIEATHMCMVMRGVRKPGSKTVT 162
                         170       180
                  ....*....|....*....|.
gi 1423606994 168 QAGLGCLADGTDAGHQAWKLL 188
Cdd:cd00642   163 SAMLGVFKEDPKTREEFLRLI 183
folE TIGR00063
GTP cyclohydrolase I; alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) ...
13-188 1.62e-46

GTP cyclohydrolase I; alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 129173 [Multi-domain]  Cd Length: 180  Bit Score: 151.06  E-value: 1.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  13 QAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELIPTQS-DGLVAVRNIRFYSMCEHHLLPFFGIV 91
Cdd:TIGR00063   3 GAMREILELIGEDLNREGLLETPKRVAKMYVEIFSGYDYANFPKITLAIFQEKhDEMVLVRDITFTSTCEHHLVPFDGKA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  92 HIAYYPaEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQAGL 171
Cdd:TIGR00063  83 HVAYIP-KDKVIGLSKIARIVEFFARRPQVQERLTQQIAEALQEILEPNGVAVVVEATHMCMKMRGIRKPGSATVTSALG 161
                         170
                  ....*....|....*..
gi 1423606994 172 GCLADGTDAGHQAWKLL 188
Cdd:TIGR00063 162 GLFKSDQKTRAEFLRLV 178
PTZ00484 PTZ00484
GTP cyclohydrolase I; Provisional
23-179 1.77e-41

GTP cyclohydrolase I; Provisional


Pssm-ID: 240434  Cd Length: 259  Bit Score: 140.38  E-value: 1.77e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  23 GLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWGELI----PTQSDGLVAVRNIRFYSMCEHHLLPFFGIVHIAYYPa 98
Cdd:PTZ00484   89 GEDPDRDGLKKTPKRVAKALEFLTKGYHMSVEEVIKKALfkvePKNNDEMVKVRDIDIFSLCEHHLLPFEGECTIGYIP- 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  99 EGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDIITQAGLGCLADGT 178
Cdd:PTZ00484  168 NKKVLGLSKFARIIEIFSRRLQVQERLTQQIANALQKYLKPMGVAVVIVASHMCMNMRGVQKHDASTTTSAYLGVFRSDP 247

                  .
gi 1423606994 179 D 179
Cdd:PTZ00484  248 K 248
PLN03044 PLN03044
GTP cyclohydrolase I; Provisional
13-191 6.55e-38

GTP cyclohydrolase I; Provisional


Pssm-ID: 215549 [Multi-domain]  Cd Length: 188  Bit Score: 129.23  E-value: 6.55e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  13 QAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWG-----ELIPTQSD-GLVAVRNIRFYSMCEHHLLP 86
Cdd:PLN03044    3 QAVRTILECLGEDVEREGLLDTPKRVAKALLFMTQGYDQDPEVVLGtalfhEPEVHDGHeEMVVVRDIDIHSTCEETMVP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  87 FFGIVHIAYYPAEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHLCLSMRNHLGGDSDII 166
Cdd:PLN03044   83 FTGRIHVGYIPNAGVILGLSKLARIAEVYARRLQTQERLTRQIADAIVESVEPLGVMVVVEAAHFCMVMRGVEKHGASTT 162
                         170       180
                  ....*....|....*....|....*
gi 1423606994 167 TQAGLGCLADGTDAGHQAWKLLMEG 191
Cdd:PLN03044  163 TSAVRGCFASNPKLRAEFFRIIRGG 187
PLN02531 PLN02531
GTP cyclohydrolase I
12-160 7.51e-29

GTP cyclohydrolase I


Pssm-ID: 215290 [Multi-domain]  Cd Length: 469  Bit Score: 111.40  E-value: 7.51e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  12 VQAAGDFLQALGLDLKQLGMEKTPYRVAMAFSHFFSGLKENPENCWG-----ELIPTQSD-------GLVAVRNIRFYSM 79
Cdd:PLN02531   36 ESAVKVLLQGLGEDVNREGLKKTPLRVAKALREATRGYKQSAKDIVGgalfpEAGLDDGVghgggcgGLVVVRDLDLFSY 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  80 CEHHLLPFFGIVHIAYYPAEGKIAGFGHFAEVVDVLARRPQLQERFTYEICKAVQDGLGARGALVIVRGTHL-------- 151
Cdd:PLN02531  116 CESCLLPFQVKCHIGYVPSGQRVVGLSKLSRVAEVFAKRLQDPQRLADEICSALHHGIKPAGVAVVLECSHIhfpneslg 195

                  ....*....
gi 1423606994 152 CLSMRNHLG 160
Cdd:PLN02531  196 SLDLSSHQG 204
PLN02531 PLN02531
GTP cyclohydrolase I
7-156 2.50e-23

GTP cyclohydrolase I


Pssm-ID: 215290 [Multi-domain]  Cd Length: 469  Bit Score: 96.00  E-value: 2.50e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994   7 VNEKAVQAAGDFLQALGLDLKQLGMEKTPYRVA---MAFSHFFS-----GLKENPENCwGELIPTQS----DGLVAVRNI 74
Cdd:PLN02531  265 PNPAMVSAVESILRSLGEDPLRKELVLTPSRFVrwlLNSTQGSRmgrnlEMKLNGFAC-EKMDPLHAnlneKTMHTELNL 343
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1423606994  75 RFYSMCEHHLLPFFGIVHIAYYPAEGKIAGFGHFAE-----VVDVLARRPQLQERFTYEICKAVQDGLGArGALVIVRGT 149
Cdd:PLN02531  344 PFWSQCEHHLLPFYGVVHVGYFCAEGGRGNRNPISRsllqsIVHFYGFRLQVQERLTRQIAETVSSLLGG-DVMVVVEAS 422

                  ....*..
gi 1423606994 150 HLCLSMR 156
Cdd:PLN02531  423 HTCMISR 429
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH