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Conserved domains on  [gi|14141942|ref|NP_115409|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Apteryx haastii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.97e-54

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 3.97e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 14141942   81 QLPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.97e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 3.97e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 14141942   81 QLPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
22-113 7.70e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.49  E-value: 7.70e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTL 101
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 14141942   102 G-LVYEWTQGGLE 113
Cdd:pfam00507  82 VgLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 22-114 3.96e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 3.96e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942  22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PLLTLLWTSIILILLT 100
Cdd:COG0838  26 SRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILL 103

                        90
                ....*....|....
gi 14141942 101 LGLVYEWTQGGLEW 114
Cdd:COG0838 104 VGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 3.97e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 164.71  E-value: 3.97e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 14141942   81 QLPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 1.55e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 153.23  E-value: 1.55e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    3 MITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 14141942   83 PHPLLTLLWTSIILILLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 5.92e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 151.57  E-value: 5.92e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    2 NMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 14141942   82 LPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 23-116 1.04e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 133.14  E-value: 1.04e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   23 FWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPLLTLLWTSIILILLTLG 102
Cdd:MTH00106  22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101

                         90
                 ....*....|....
gi 14141942  103 LVYEWTQGGLEWAE 116
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 1.50e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 112.77  E-value: 1.50e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 14141942   81 QLPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 4.24e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 108.83  E-value: 4.24e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 14141942   81 QLPHPllTLLWTSIILILLTLGLVYEWTQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
22-113 7.70e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 97.49  E-value: 7.70e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTL 101
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 14141942   102 G-LVYEWTQGGLE 113
Cdd:pfam00507  82 VgLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 4.74e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 88.30  E-value: 4.74e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   31 NTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPLLTLLWTSIILILLTLGLVYEWTQG 110
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 14141942  111 GLEW 114
Cdd:MTH00161 110 ALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 33-116 1.76e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 87.22  E-value: 1.76e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   33 EKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPLLTLLWTSIILILLTLGLVYEWTQGGL 112
Cdd:MTH00148  34 EKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSL 113


                 ....
gi 14141942  113 EWAE 116
Cdd:MTH00148 114 DWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 26-116 1.01e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.04  E-value: 1.01e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   26 AQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLPHPLLTLLWTSIILILLTLGLVY 105
Cdd:MTH00202  27 FRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIH 106

                         90
                 ....*....|.
gi 14141942  106 EWTQGGLEWAE 116
Cdd:MTH00202 107 EWKEGSLDWVK 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 22-115 2.24e-21

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 81.83  E-value: 2.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTL 101
Cdd:PRK06602  29 GKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILVLL 106

                         90
                 ....*....|....*
gi 14141942  102 G-LVYEWTQGGLEWA 115
Cdd:PRK06602 107 VgLVYLWRKGALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 30-114 2.34e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 81.68  E-value: 2.34e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   30 PNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTLG-LVYEWT 108
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111


                 ....*.
gi 14141942  109 QGGLEW 114
Cdd:MTH00055 112 KGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 22-114 3.96e-21

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 80.94  E-value: 3.96e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942  22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PLLTLLWTSIILILLT 100
Cdd:COG0838  26 SRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILL 103

                        90
                ....*....|....
gi 14141942 101 LGLVYEWTQGGLEW 114
Cdd:COG0838 104 VGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 5.11e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 78.36  E-value: 5.11e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942    1 MNMITFMLLLSLLLSIILITLNFWLAQMNPNT-EKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 14141942   80 IQLPHPLLTLLWTSIILILLTLGLVYEWTQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 23-114 1.01e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 74.71  E-value: 1.01e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   23 FWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTLG 102
Cdd:MTH00018  22 YFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPFGFWTMVGFLFILTL 99

                         90
                 ....*....|...
gi 14141942  103 -LVYEWTQGGLEW 114
Cdd:MTH00018 100 gLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-114 5.02e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 68.42  E-value: 5.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   30 PNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPHPLLTLLWTSIILILLTLG-LVYEWT 108
Cdd:MTH00030  39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFSFWIVYTFLIVLAIgLAYEWI 116


                 ....*.
gi 14141942  109 QGGLEW 114
Cdd:MTH00030 117 KGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 30-114 3.77e-12

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 58.14  E-value: 3.77e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   30 PNTEKLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWAIQLPH-PLLTLLWTSIILILLTLGLVYE 106
Cdd:PRK07928  33 YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGVFGLVEMALFMLTVFVAYAYV 110


                 ....*...
gi 14141942  107 WTQGGLEW 114
Cdd:PRK07928 111 WRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 24-114 1.26e-09

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 51.53  E-value: 1.26e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   24 WLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PLLTLLWTSIILILLTLG 102
Cdd:CHL00022  30 LLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVlGVSAFIEALIFVLILIVG 107

                         90
                 ....*....|..
gi 14141942  103 LVYEWTQGGLEW 114
Cdd:CHL00022 108 LVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
24-114 2.41e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.89  E-value: 2.41e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   24 WLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWAIQLPH-PLLTLLWTSIILILLTLG 102
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKlGLFALIEMLIFVVMLLVG 109

                         90
                 ....*....|..
gi 14141942  103 LVYEWTQGGLEW 114
Cdd:PRK07756 110 LAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
25-114 1.18e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.89  E-value: 1.18e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141942   25 LAQMNPNTEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWAIQLPH-PLLTLLWTSIILILLTLGL 103
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLlGLFGLIEMLLFIVLLTIGF 114

                         90
                 ....*....|.
gi 14141942  104 VYEWTQGGLEW 114
Cdd:PRK08489 115 IYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 22-74 1.20e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 43.73  E-value: 1.20e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 14141942   22 NFWLAQMNPNTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092  22 NFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 9.23e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.73  E-value: 9.23e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 14141942   36 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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