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Conserved domains on  [gi|14141813|ref|NP_115273|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Eudromia elegans]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 566.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00111   2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00111  82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00111 162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00111 242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                 ..
gi 14141813  321 HL 322
Cdd:MTH00111 322 QL 323
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 566.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00111   2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00111  82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00111 162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00111 242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                 ..
gi 14141813  321 HL 322
Cdd:MTH00111 322 QL 323
NADHdh pfam00146
NADH dehydrogenase;
11-307 4.66e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 304.01  E-value: 4.66e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    11 LSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLLALTIW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    91 --IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGNYSLST 168
Cdd:pfam00146  83 avIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   169 LATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTTILFI- 247
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14141813   248 --NPTFLISSpqlfPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLW 307
Cdd:pfam00146 243 gwLGPFPLPG----LLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 8.52e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.63  E-value: 8.52e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:COG1005   6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  81 LALLLALTIWIPLPI--PFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSII 158
Cdd:COG1005  86 LAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813 159 TLSGNYSLSTLATTQE-PLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIML 237
Cdd:COG1005 166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14141813 238 MNMMTTILFI---NPTFLISSPQLFP--LILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 303
Cdd:COG1005 246 VSALATTLFLggwLGPFPILPLGGLPgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-322 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 566.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00111   2 PTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00111  82 LALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00111 162 SGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNT 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00111 242 LTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPP 321


                 ..
gi 14141813  321 HL 322
Cdd:MTH00111 322 QL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 3-322 2.04e-172

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 481.03  E-value: 2.04e-172
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    3 ILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILA 82
Cdd:MTH00134   5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   83 LLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSG 162
Cdd:MTH00134  85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  163 NYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMT 242
Cdd:MTH00134 165 GFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  243 TILFINPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPPHL 322
Cdd:MTH00134 245 AILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-320 1.05e-171

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 479.12  E-value: 1.05e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00071   2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00071  82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00071 162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00071 242 LSTILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 11-322 3.52e-171

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 477.58  E-value: 3.52e-171
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   11 LSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLLALTIW 90
Cdd:MTH00104   7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   91 IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGNYSLSTLA 170
Cdd:MTH00104  87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLI 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  171 TTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTTILFINPT 250
Cdd:MTH00104 167 TTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAF 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14141813  251 FLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPPHL 322
Cdd:MTH00104 247 HNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 3-320 3.28e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 393.51  E-value: 3.28e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    3 ILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILA 82
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   83 LLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSG 162
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  163 NYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMT 242
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14141813  243 TILFINPTFLISSpqlfpliLATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00218 241 VILFLGTSLTTIN-------LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-322 4.65e-136

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 388.56  E-value: 4.65e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00040 161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLISS-PQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLP 319
Cdd:MTH00040 241 LSVILFLGGGSPFNEiFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320


                 ...
gi 14141813  320 PHL 322
Cdd:MTH00040 321 PNY 323
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 3-317 1.52e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.91  E-value: 1.52e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    3 ILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILA 82
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   83 LLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSG 162
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  163 NYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMT 242
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14141813  243 TILFINPTFLIsspqlfplILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAG 317
Cdd:MTH00195 241 TILFLGGGGTI--------IVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 4-304 2.98e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 309.88  E-value: 2.98e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    4 LTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILAL 83
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   84 LLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGN 163
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  164 YSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTT 243
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14141813  244 ILFINPTFLISSpqLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLAL 304
Cdd:MTH00143 241 VLFFGGSSVLFL--LGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-315 7.79e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 306.31  E-value: 7.79e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMslsyIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00193   3 MMLINFLLL----IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00193  79 FSLFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00193 159 IGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSM 238

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14141813  241 MTTILFINPTFLIsspqlfpLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISF 315
Cdd:MTH00193 239 LFVLMFLGGDLLS-------LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
11-307 4.66e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 304.01  E-value: 4.66e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    11 LSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLLALTIW 90
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    91 --IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGNYSLST 168
Cdd:pfam00146  83 avIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   169 LATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTTILFI- 247
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14141813   248 --NPTFLISSpqlfPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLW 307
Cdd:pfam00146 243 gwLGPFPLPG----LLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-310 4.02e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 294.25  E-value: 4.02e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMslsyIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00225   2 SFLLKFLIM----LICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00225  78 LSLILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFL 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00225 158 VLTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSM 237

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILFINPTFLIsspqlFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTS 310
Cdd:MTH00225 238 LTSILFFGGFFVT-----IDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-320 6.28e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 289.32  E-value: 6.28e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    6 YLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLL 85
Cdd:MTH00054   4 IIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   86 ALTIW--IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGN 163
Cdd:MTH00054  84 AFIAWgvIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  164 YSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTT 243
Cdd:MTH00054 164 LNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGV 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  244 ILFINPTFLISSPQLFP---LILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00054 244 ILFLGGWLVISGPTSYFsnfVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-320 4.67e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 287.40  E-value: 4.67e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    3 ILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILA 82
Cdd:MTH00216   5 IIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   83 LLLALTIW--IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00216  85 FTLALIVWgvIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLC 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEP-LYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMN 239
Cdd:MTH00216 165 VGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMS 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  240 MMTTILFINpTFLISSPQLF--PLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISFAG 317
Cdd:MTH00216 245 CLTTILFLG-GWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNG 323


                 ...
gi 14141813  318 LPP 320
Cdd:MTH00216 324 PPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-303 8.52e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.63  E-value: 8.52e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   1 MYILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:COG1005   6 APLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPI 85

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  81 LALLLALTIWIPLPI--PFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSII 158
Cdd:COG1005  86 LAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVV 165

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813 159 TLSGNYSLSTLATTQE-PLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIML 237
Cdd:COG1005 166 LLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFL 245

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14141813 238 MNMMTTILFI---NPTFLISSPQLFP--LILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLA 303
Cdd:COG1005 246 VSALATTLFLggwLGPFPILPLGGLPgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
2-307 1.88e-90

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 272.84  E-value: 1.88e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    2 YILTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPIL 81
Cdd:PRK06076   8 LLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   82 ALLLALTIWIPLPI--PFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIIT 159
Cdd:PRK06076  88 AFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVL 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  160 LSGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMN 239
Cdd:PRK06076 168 LAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVS 247

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14141813  240 MMTTILFI---NPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLW 307
Cdd:PRK06076 248 ALITTLFLggwLPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-320 2.75e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 250.32  E-value: 2.75e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYII---PVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTL 77
Cdd:MTH00029   1 MTIYSYITVTIKLLIifvPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   78 TPILALLLALTIW--IPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILL 155
Cdd:MTH00029  81 APIISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  156 SIITLSGNYSLSTLATTQEPLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANI 235
Cdd:MTH00029 161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  236 MLMNMMTTILFIN------------PTFLISSPQLFPLILA----TKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLP 299
Cdd:MTH00029 241 ILMSCMMTIFFLGgwlspldgiptpPEAFSIFEQIASSKSSfwffTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                        330       340
                 ....*....|....*....|.
gi 14141813  300 LTLALCLWHTSMPISFAGLPP 320
Cdd:MTH00029 321 LSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 1-315 1.56e-77

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 239.30  E-value: 1.56e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    1 MYILTYLFMSLSYIIpVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPI 80
Cdd:MTH00010   1 MNISFFISILLSYVM-ALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   81 LALLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITL 160
Cdd:MTH00010  80 MSLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLI 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  161 SGNYSLSTLATTQEPLYLIFsTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:MTH00010 160 LQTFSFSKIIMSQYSWILLM-IIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSL 238

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 14141813  241 MTTILFIN--PTFLISspqlfPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLwhTSMPISF 315
Cdd:MTH00010 239 FTSVFFTSfiPSIFIS-----DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 9-302 1.04e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 187.41  E-value: 1.04e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    9 MSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLLALT 88
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   89 IWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGNYSLST 168
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  169 lattqeplYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTTILFIN 248
Cdd:MTH00090 161 --------SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 14141813  249 PTFLISspqlfplilatktLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTL 302
Cdd:MTH00090 233 FSFLML-------------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ndhA CHL00032
NADH dehydrogenase subunit 1
 11-310 8.80e-45

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 156.26  E-value: 8.80e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   11 LSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLLALTIW 90
Cdd:CHL00032  34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSY 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   91 ipLPIPFS----LTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGnySL 166
Cdd:CHL00032 114 --LVIPFGyhlvLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN--SL 189

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  167 STLATTQEPLYLIFSTWPL------AMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNM 240
Cdd:CHL00032 190 STVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSL 269

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  241 MTTILF------------------INPTFLISSPQLFPLILATKTLLlssgFLWV----RASYPRFRYDQLMHLLWKNFL 298
Cdd:CHL00032 270 FVTVLYlggwnlsipyifipelfeINKTGGVFGTTIGIFITLAKTYL----FLFIsittRWTLPRLRMDQLLNLGWKFLL 345

                        330
                 ....*....|..
gi 14141813  299 PLTLALCLWHTS 310
Cdd:CHL00032 346 PISLGNLLLTTS 357
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-302 5.89e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 152.39  E-value: 5.89e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813    6 YLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIQPSTSSPYLFTLTPILALLL 85
Cdd:MTH00058   3 GLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   86 ALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSGNYS 165
Cdd:MTH00058  83 VVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  166 LSTLATTQEPLYLIFstWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMNMMTTIL 245
Cdd:MTH00058 163 LVDFYYSGWLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVL 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 14141813  246 FINPTFLIsspqlfplILATKTLLLssgFLWVRASYPRFRYDQLMHLLWKNFLPLTL 302
Cdd:MTH00058 241 FFGGGFVS--------IMLLFHLLF---FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
4-307 8.79e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.20  E-value: 8.79e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813   4 LTYLFMSLSYIIPVLIAVAFLTLVERKILSYMQARKGPnivgpfGLLQPIADGVKLFIKEPIQPSTSSP-YLFTLTPILA 82
Cdd:COG0650   1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWlFRAAPYVALA 74

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813  83 LLLALTIWIPLPIPFSLTDLNLGLLFLLSMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIITLSG 162
Cdd:COG0650  75 AMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14141813 163 NYSLSTLATTQE---PLYLIFSTWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYSAGPFALFFLAEYANIMLMN 239
Cdd:COG0650 155 STSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 14141813 240 MMTTILFInPTFLISSPQLFPLILATKTLLLSSGFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLW 307
Cdd:COG0650 235 SLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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