|
Name |
Accession |
Description |
Interval |
E-value |
| type_III_yscC |
TIGR02516 |
type III secretion outer membrane pore, YscC/HrcC family; A number of proteins homologous to ... |
51-600 |
7.25e-129 |
|
type III secretion outer membrane pore, YscC/HrcC family; A number of proteins homologous to the type IV pilus secretin PilQ (TIGR02515) are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). The clade described by this model contains the outer membrane pore proteins of bacterial type III secretion systems, typified by YscC for animal pathogens and HrcC for plant pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274174 [Multi-domain] Cd Length: 462 Bit Score: 389.04 E-value: 7.25e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 51 PFTIVANGKKIGDFIRELASSQGVTAVVDPKVDGVISGRFSG-TPQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMI 129
Cdd:TIGR02516 1 EYFYVAKQESLRALLADFAANYGIPVVVSSKVNKKVTGKFEDdNPEKFLQRLALLYGLTWYYDGNALYIYPNSEIARAVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 130 PIPPNASGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAVGSVG--DPSANGAHADIRAFRLKYGWASD 207
Cdd:TIGR02516 81 SPRPLSANELKKALRRSGLYDPRFPWRGDPEEGTVYVSGPPAYIDLVRNAATALEkqDQGRAGNRQVVKVFPLKYASASD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 208 FTINRSGKEVTVPGVATILRRLFGkgggttaaPSSTPLGqaarqvklgsgltiavprldfpdisggprqggyggadsgmg 287
Cdd:TIGR02516 161 RTYNYRDQKVTIPGVATILRRLLS--------GGRQGAG----------------------------------------- 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 288 ggfspfsnNGGGDTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTH 367
Cdd:TIGR02516 192 --------GGRASASPKISADPRTNAVLIRDRPERMAIYEQLIQQLDVPPRLIEISAWIIDIDASDLSQLGVDWQATLGA 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 368 GDVQIGNGQnalngntqyngagnppltfgigtsetgqtGAFMPTGIALTASIGGSLRnYLLTRVNALAQKGQAQLRSKPK 447
Cdd:TIGR02516 264 GDRQTGFNV-----------------------------SAGAGLGATGSSIVTSDGD-YFMARVNALEQTGKAKIVSRPS 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 448 VLALDNTEAILENLTQFYVQVPGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavSGNPQSVMMSIDIQDGN--IVPGQA 525
Cdd:TIGR02516 314 VLTLENVQAVLDNNRTFYVKVSGERVADLESVTAGTSLRVTPRVIGD--------EGAQRQIKLNVDIEDGQqkTDGTST 385
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1409814741 526 VSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVV 600
Cdd:TIGR02516 386 VDALPEIKRTEINTQARVGHGQSLLIGGYYRDESADSVDGIPLLGDIPLLGNLFRSTSKEKSRVVRLFLITPKIV 460
|
|
| PRK15346 |
PRK15346 |
EscC/YscC/HrcC family type III secretion system outer membrane ring protein; |
32-604 |
1.07e-86 |
|
EscC/YscC/HrcC family type III secretion system outer membrane ring protein;
Pssm-ID: 237950 [Multi-domain] Cd Length: 499 Bit Score: 280.81 E-value: 1.07e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 32 LCMAPAQHARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDPKVDGVISGRF-SGTPQQTLDTICSTYGLTWY 110
Cdd:PRK15346 11 FLLNTAKFAASKSIPWQGNPFFIYSRGMPLAEVLHDLGANYGIPVVISPEINDTFSGKIrDGPPVKILNELARRYHLTWY 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 111 YDGSFLYVDPADQSQTQMIPIPPNASGEIGRALQAMQIPDKRYTLVIN-DRANSVYVAGPRRYVELVRQaVGSVGDPSA- 188
Cdd:PRK15346 91 YDGNTLYVYKASEIKRQVITPTYLSAGRLIKYLQSQGILNGKSCEVKAiTGTNALEVSGVPECIERVTQ-LAKVLDEQAq 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 189 --NGAHADIRAFRLKYGWASDFTINRSGKEVTVPGVATILRRLfGKGGGTTAAPSSTPLGQAARQvklgsgltiavprld 266
Cdd:PRK15346 170 krKQNKETVKVFPLKYASATDTTYQYRDQNVVVPGVVSVLREM-AQGNSLPLPGSNAVEGSPASQ--------------- 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 267 fpdisggprqggyggadsgmgggfspfsnngggdTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTI 346
Cdd:PRK15346 234 ----------------------------------ALPVFSADPRQNAVIVRDRAANMAIYRSLITQLDQRPQMIEISVSI 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 347 IDINEDSLDSLGIDWRlhtthGDVQIGNGQNALNGNTQYNGAGNppltfgiGTSETGQTGAFMptgialtasiggslrny 426
Cdd:PRK15346 280 IDVDAGDINQLGIDWS-----ASASLGGGKISFNSGFADGNASG-------FSTVISNTGNFM----------------- 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 427 llTRVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavSGNp 506
Cdd:PRK15346 331 --VRLNALEKNSKAKILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESITTGSLLRVTPRLIDD--------NGT- 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 507 QSVMMSIDIQDGNIVPGQAVSN-VPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKS 585
Cdd:PRK15346 400 QKVMLNLNIQDGQQSATQSETDpLPEVQNSEIATQATLKAGQSLLLGGFIQDKQIESQNKIPLLGDIPLIGGLFRSTDKQ 479
|
570
....*....|....*....
gi 1409814741 586 GNHMERFYLLTPRVVTSAS 604
Cdd:PRK15346 480 SHSVVRLFLIKAEPVNNGI 498
|
|
| PulD |
COG1450 |
Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, ... |
298-604 |
4.75e-60 |
|
Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 441059 [Multi-domain] Cd Length: 333 Bit Score: 204.77 E-value: 4.75e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 298 GGDTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWrlhtthgdvqigNGQN 377
Cdd:COG1450 39 GGAAGVSVVADPRTNSLIVRATPEQLREIEELIEQLDVPRRQVLIEAKIVEVSLSDLRELGIDW------------SALG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 378 ALNGNTQYNGAGNpplTFGIGTSETGQTGafmptgiaLTASIGGSlrNYLLTRVNALAQKGQAQLRSKPKVLALDNTEAI 457
Cdd:COG1450 107 GNGGGVNFGGTGS---LGSLAAAGSLGGG--------LNLGLLGG--GNFGALLNALESNGDANVLSSPSILTLNNQEAV 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 458 LENLTQFYVQV-------PGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavsgnpQSVMMSIDIQDGNIVP--GQAVSN 528
Cdd:COG1450 174 IKVGQTVPYVTgstttssTGNPTTTIEYVDVGITLKVTPQINED------------GTVTLDINPEVSSVTGstTGGGNG 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1409814741 529 VPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSAS 604
Cdd:COG1450 242 LPTINKREISTTVRVKDGQTVVLGGLIRDEESESESKVPLLGDIPLLGRLFRSTSKSKEKTELVIFITPTIIRDGE 317
|
|
| Secretin |
pfam00263 |
Bacterial type II and III secretion system protein; |
433-600 |
1.16e-35 |
|
Bacterial type II and III secretion system protein;
Pssm-ID: 459738 [Multi-domain] Cd Length: 159 Bit Score: 131.87 E-value: 1.16e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 433 ALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYS----VTTGTSIKVTPMIVDEairnaaavsgnpQS 508
Cdd:pfam00263 1 ALEQNGKAKILSSPSLLTLDNQEASIKVGQEVPVPTTSTTGGTTTTtvefKDAGLSLKVTPQVTPD------------GT 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 509 VMMSIDIQDGNIVPGQAVSnVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNH 588
Cdd:pfam00263 69 ITLKINPEVSSPDGNGGNG-VPTINTREISTTVRVKDGQTVVIGGLIQEEDSETESKVPLLGDIPLLGALFRSTSKSKEK 147
|
170
....*....|..
gi 1409814741 589 MERFYLLTPRVV 600
Cdd:pfam00263 148 TELLIFITPRIV 159
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| type_III_yscC |
TIGR02516 |
type III secretion outer membrane pore, YscC/HrcC family; A number of proteins homologous to ... |
51-600 |
7.25e-129 |
|
type III secretion outer membrane pore, YscC/HrcC family; A number of proteins homologous to the type IV pilus secretin PilQ (TIGR02515) are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). The clade described by this model contains the outer membrane pore proteins of bacterial type III secretion systems, typified by YscC for animal pathogens and HrcC for plant pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274174 [Multi-domain] Cd Length: 462 Bit Score: 389.04 E-value: 7.25e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 51 PFTIVANGKKIGDFIRELASSQGVTAVVDPKVDGVISGRFSG-TPQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMI 129
Cdd:TIGR02516 1 EYFYVAKQESLRALLADFAANYGIPVVVSSKVNKKVTGKFEDdNPEKFLQRLALLYGLTWYYDGNALYIYPNSEIARAVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 130 PIPPNASGEIGRALQAMQIPDKRYTLVINDRANSVYVAGPRRYVELVRQAVGSVG--DPSANGAHADIRAFRLKYGWASD 207
Cdd:TIGR02516 81 SPRPLSANELKKALRRSGLYDPRFPWRGDPEEGTVYVSGPPAYIDLVRNAATALEkqDQGRAGNRQVVKVFPLKYASASD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 208 FTINRSGKEVTVPGVATILRRLFGkgggttaaPSSTPLGqaarqvklgsgltiavprldfpdisggprqggyggadsgmg 287
Cdd:TIGR02516 161 RTYNYRDQKVTIPGVATILRRLLS--------GGRQGAG----------------------------------------- 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 288 ggfspfsnNGGGDTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTH 367
Cdd:TIGR02516 192 --------GGRASASPKISADPRTNAVLIRDRPERMAIYEQLIQQLDVPPRLIEISAWIIDIDASDLSQLGVDWQATLGA 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 368 GDVQIGNGQnalngntqyngagnppltfgigtsetgqtGAFMPTGIALTASIGGSLRnYLLTRVNALAQKGQAQLRSKPK 447
Cdd:TIGR02516 264 GDRQTGFNV-----------------------------SAGAGLGATGSSIVTSDGD-YFMARVNALEQTGKAKIVSRPS 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 448 VLALDNTEAILENLTQFYVQVPGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavSGNPQSVMMSIDIQDGN--IVPGQA 525
Cdd:TIGR02516 314 VLTLENVQAVLDNNRTFYVKVSGERVADLESVTAGTSLRVTPRVIGD--------EGAQRQIKLNVDIEDGQqkTDGTST 385
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1409814741 526 VSNVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVV 600
Cdd:TIGR02516 386 VDALPEIKRTEINTQARVGHGQSLLIGGYYRDESADSVDGIPLLGDIPLLGNLFRSTSKEKSRVVRLFLITPKIV 460
|
|
| PRK15346 |
PRK15346 |
EscC/YscC/HrcC family type III secretion system outer membrane ring protein; |
32-604 |
1.07e-86 |
|
EscC/YscC/HrcC family type III secretion system outer membrane ring protein;
Pssm-ID: 237950 [Multi-domain] Cd Length: 499 Bit Score: 280.81 E-value: 1.07e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 32 LCMAPAQHARAADLRWRNKPFTIVANGKKIGDFIRELASSQGVTAVVDPKVDGVISGRF-SGTPQQTLDTICSTYGLTWY 110
Cdd:PRK15346 11 FLLNTAKFAASKSIPWQGNPFFIYSRGMPLAEVLHDLGANYGIPVVISPEINDTFSGKIrDGPPVKILNELARRYHLTWY 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 111 YDGSFLYVDPADQSQTQMIPIPPNASGEIGRALQAMQIPDKRYTLVIN-DRANSVYVAGPRRYVELVRQaVGSVGDPSA- 188
Cdd:PRK15346 91 YDGNTLYVYKASEIKRQVITPTYLSAGRLIKYLQSQGILNGKSCEVKAiTGTNALEVSGVPECIERVTQ-LAKVLDEQAq 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 189 --NGAHADIRAFRLKYGWASDFTINRSGKEVTVPGVATILRRLfGKGGGTTAAPSSTPLGQAARQvklgsgltiavprld 266
Cdd:PRK15346 170 krKQNKETVKVFPLKYASATDTTYQYRDQNVVVPGVVSVLREM-AQGNSLPLPGSNAVEGSPASQ--------------- 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 267 fpdisggprqggyggadsgmgggfspfsnngggdTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTI 346
Cdd:PRK15346 234 ----------------------------------ALPVFSADPRQNAVIVRDRAANMAIYRSLITQLDQRPQMIEISVSI 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 347 IDINEDSLDSLGIDWRlhtthGDVQIGNGQNALNGNTQYNGAGNppltfgiGTSETGQTGAFMptgialtasiggslrny 426
Cdd:PRK15346 280 IDVDAGDINQLGIDWS-----ASASLGGGKISFNSGFADGNASG-------FSTVISNTGNFM----------------- 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 427 llTRVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavSGNp 506
Cdd:PRK15346 331 --VRLNALEKNSKAKILSQPSVVTLNNIQAVLDKNVTFYTKLQGEKVAKLESITTGSLLRVTPRLIDD--------NGT- 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 507 QSVMMSIDIQDGNIVPGQAVSN-VPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKS 585
Cdd:PRK15346 400 QKVMLNLNIQDGQQSATQSETDpLPEVQNSEIATQATLKAGQSLLLGGFIQDKQIESQNKIPLLGDIPLIGGLFRSTDKQ 479
|
570
....*....|....*....
gi 1409814741 586 GNHMERFYLLTPRVVTSAS 604
Cdd:PRK15346 480 SHSVVRLFLIKAEPVNNGI 498
|
|
| PulD |
COG1450 |
Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, ... |
298-604 |
4.75e-60 |
|
Type II secretory pathway component GspD/PulD (secretin) [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 441059 [Multi-domain] Cd Length: 333 Bit Score: 204.77 E-value: 4.75e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 298 GGDTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWrlhtthgdvqigNGQN 377
Cdd:COG1450 39 GGAAGVSVVADPRTNSLIVRATPEQLREIEELIEQLDVPRRQVLIEAKIVEVSLSDLRELGIDW------------SALG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 378 ALNGNTQYNGAGNpplTFGIGTSETGQTGafmptgiaLTASIGGSlrNYLLTRVNALAQKGQAQLRSKPKVLALDNTEAI 457
Cdd:COG1450 107 GNGGGVNFGGTGS---LGSLAAAGSLGGG--------LNLGLLGG--GNFGALLNALESNGDANVLSSPSILTLNNQEAV 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 458 LENLTQFYVQV-------PGYQDSSLYSVTTGTSIKVTPMIVDEairnaaavsgnpQSVMMSIDIQDGNIVP--GQAVSN 528
Cdd:COG1450 174 IKVGQTVPYVTgstttssTGNPTTTIEYVDVGITLKVTPQINED------------GTVTLDINPEVSSVTGstTGGGNG 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1409814741 529 VPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSAS 604
Cdd:COG1450 242 LPTINKREISTTVRVKDGQTVVLGGLIRDEESESESKVPLLGDIPLLGRLFRSTSKSKEKTELVIFITPTIIRDGE 317
|
|
| PRK15339 |
PRK15339 |
EscC/YscC/HrcC family type III secretion system outer membrane ring protein; |
86-606 |
1.96e-58 |
|
EscC/YscC/HrcC family type III secretion system outer membrane ring protein;
Pssm-ID: 237948 [Multi-domain] Cd Length: 559 Bit Score: 206.55 E-value: 1.96e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 86 ISGRFSGT-PQQTLDTICSTYGLTWYYDGSFLYVDPADQSQTQMIPIPPNASGEIGRALQAMQIPDKRYTLVINDRANSV 164
Cdd:PRK15339 67 ISGNFDLHdPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKRYPLRGDNRKGTF 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 165 YVAGPRRYVELVRQAvGSVGDPSANGAHAD---IRAFRLKYGWASDFTINRSGKEVTVPGVATILRRLFGKGGgttaAPS 241
Cdd:PRK15339 147 YVSGPPVYVDLVVNA-ATLMDKQNDGIELGrqkIGVIRLNNTFVGDRTYNLRGQKIVIPGIATVIERLLNGEE----QPS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 242 STplgQAARQVKlgsgltiAVPrlDFPDISGGPRQGGYGGADSGMgggfSPFSNNGGGDTLpQIVADPAINAVIVRDLPE 321
Cdd:PRK15339 222 GR---QASSEPP-------AMP--PFSANGEKGKAANYAGGMSLQ----EALKQNAAAGDI-KIIAYPDTNSLLVKGTAE 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 322 NMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRlhtthGDVQIGNGQNAlngntqyngagnpplTFGIGTSE 401
Cdd:PRK15339 285 QVHFIEMLVKALDVAKRHVELSLWIIDLDKSDLEQLGVNWS-----GSITIGDKLGV---------------SLNQSSIS 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 402 TGQTGAFMPTgialtasiggslrnylltrVNALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYSVTT 481
Cdd:PRK15339 345 TLDGSRFIAA-------------------VMALEQKKKANVVSRPVVLTQENIPAIFDNNRTFYTKLVGERNVALEHVTY 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 482 GTSIKVTPMIvdeairnaaavSGNPQsVMMSIDIQDGNIVPGQ-----AVSNVPVIQQRNIVTKTMIDEGKSLLIAGFND 556
Cdd:PRK15339 406 GTMISVLPRF-----------SADGQ-IEMSLDIEDGNEKTPQsdtttSVDALPEVGRTLISTIARVPQGKSLLIGGYTR 473
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1409814741 557 DEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSASMY 606
Cdd:PRK15339 474 DANTDEVQSIPFLGSLPLIGSLFRYSSKNKSNIVRVFLIEPREIVEPLTP 523
|
|
| type_II_gspD |
TIGR02517 |
type II secretion system protein D; In Gram-negative bacteria, proteins that have first ... |
61-602 |
3.43e-39 |
|
type II secretion system protein D; In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274175 [Multi-domain] Cd Length: 594 Bit Score: 152.93 E-value: 3.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 61 IGDFIRELASSQGVTAVVDPKVDGVISGRFSG--TPQQTLDTICST---YGLTWYYDGSFLYVDPADQS-QTQMIPIPP- 133
Cdd:TIGR02517 8 ISTVVKAISDLTGKNFIIDPRVKGKITIISPRpvTEDEAYQLFLSAlraQGFAVVPEGNGYKIVVPRAAaKLSPGPIEDg 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 134 NASGEIGRALQ----------AMQ-------IPDKRYTLVINDRANSVYVAGPRRYVELVRQAVGSVGDPSAngahADIR 196
Cdd:TIGR02517 88 PAPGVGGDQFVtrvfplrnisASElvpvlrpLVSPNGDVAAYPPTNTIVVTDYASNINRVARIIQQLDVDGA----GSVE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 197 AFRLKYGWASDftinrsgkevtvpgVATILRRLFGKGGGTTAAPSSTPLGQAARQVKL---------------------- 254
Cdd:TIGR02517 164 VIPLKNASAVD--------------IADVLNKLLGEGGKTDGGGKLSVIAPDRRNNILiragspealerikklisqldvp 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 255 -GSGLTIAVPRLDFPD----------ISGGPRQGGYGGADSGMGGGFSPFSNNGGGDTLP------QIVADPAINAVIVR 317
Cdd:TIGR02517 230 aSEGGNVRVYYLRNADaeelaktlqgVFGGGGNEPGSSSSPGLGGAVNPGGSQSAQAASSasggsvSGSADKATNSLIIT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 318 DLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDVQIGNGQNALNGNTQYNGAGNPPLTFGI 397
Cdd:TIGR02517 310 ASPQDYKNIRAVIKQLDVRRAQVLVEAIIVEVSLDDALELGVQWLIAGTGGGVNFSTGSPNSGSLLGASASAISLGSAGI 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 398 GTSETGQTGAFMPTGIALTASIGGSLrnylltrvNALAQKGQAQLRSKPKVLALDNTEAILEN------LTQFYVQVPGY 471
Cdd:TIGR02517 390 GLLVTSSSTTSGVGGTGGGPNLGVLL--------NALKQDTGFNVLSTPSLLTLDNQEAEINVgqevpvLTGSYNTGTGG 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 472 QDSSLYSV----TTGTSIKVTPMIVdeairnaaavSGNpqSVMMSIDIQDGNIVPGQAVSNV--PVIQQRNIVTKTMIDE 545
Cdd:TIGR02517 462 TNANPFNTyqrkDVGIKLKVTPQIN----------EGG--TVRLEIYQEVSSVAPTTVGSAAsgPTFNKREIKTVVLVDN 529
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1409814741 546 GKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTS 602
Cdd:TIGR02517 530 GDTVVLGGLIQDKTSESVTKVPLLGDIPVLGWLFRSTTTERTKTNLMVFITPRIIRD 586
|
|
| Secretin |
pfam00263 |
Bacterial type II and III secretion system protein; |
433-600 |
1.16e-35 |
|
Bacterial type II and III secretion system protein;
Pssm-ID: 459738 [Multi-domain] Cd Length: 159 Bit Score: 131.87 E-value: 1.16e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 433 ALAQKGQAQLRSKPKVLALDNTEAILENLTQFYVQVPGYQDSSLYS----VTTGTSIKVTPMIVDEairnaaavsgnpQS 508
Cdd:pfam00263 1 ALEQNGKAKILSSPSLLTLDNQEASIKVGQEVPVPTTSTTGGTTTTtvefKDAGLSLKVTPQVTPD------------GT 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 509 VMMSIDIQDGNIVPGQAVSnVPVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNH 588
Cdd:pfam00263 69 ITLKINPEVSSPDGNGGNG-VPTINTREISTTVRVKDGQTVVIGGLIQEEDSETESKVPLLGDIPLLGALFRSTSKSKEK 147
|
170
....*....|..
gi 1409814741 589 MERFYLLTPRVV 600
Cdd:pfam00263 148 TELLIFITPRIV 159
|
|
| IV_pilus_PilQ |
TIGR02515 |
type IV pilus secretin (or competence protein) PilQ; A number of proteins homologous to PilQ ... |
305-600 |
1.35e-35 |
|
type IV pilus secretin (or competence protein) PilQ; A number of proteins homologous to PilQ are involved in type IV pilus formation, competence for transformation, type III secretion, and type II secretion (also called the main terminal branch of the general secretion pathway). Members of this family include PilQ itself, which is a component of the type IV pilus structure, from a number of species. In Haemophilus influenzae, the member of this family is associated with competence for transformation with exogenous DNA rather than with formation of a type IV pilus; the surface structure required for competence may be considered an unusual, incomplete type IV pilus structure. [Cell envelope, Surface structures]
Pssm-ID: 274173 [Multi-domain] Cd Length: 418 Bit Score: 139.37 E-value: 1.35e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 305 IVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDVQIGNGQ-NALNGNT 383
Cdd:TIGR02515 133 VTVDPRTNTLIVTDTPENLARIRKLIAELDIPVRQVLIEARIVEATDSFSRELGVRWGITDKNGNGNGTAGGiGGNNGTT 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 384 QYNGAGNPPLTFGIGTSETGQT-GAFMPTGIALtASIGGSLRnyLLTRVNALAQKGQAQLRSKPKVLALDNTEAILENLT 462
Cdd:TIGR02515 213 ATGAGGTGNPPFGDNLNVNLATaTTAAGISFAL-GKIGSGRL--LDLELSALESEGKGEIISSPRVLTANNKEAKIEQGT 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 463 QfyvqVPgYQDSSLYSVTTGT------SIKVTPMIVdeairnaaavsgNPQSVMMSIDI-QDGNIVPGQAVSNVPVIQQR 535
Cdd:TIGR02515 290 E----IP-YQQTSSSGATSVEfkeavlSLEVTPQIT------------PDGRIIMDLLVsKDSPGVVAQAGGGVPAIDKQ 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1409814741 536 NIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVV 600
Cdd:TIGR02515 353 EINTQVLVKNGETVVIGGIYEQTQTNSEDKVPLLGDIPVLGNLFKKTGKSDEKSELLIFITPRIV 417
|
|
| HofQ |
COG4796 |
Type II secretory pathway, component HofQ [Intracellular trafficking, secretion, and vesicular ... |
305-603 |
4.13e-34 |
|
Type II secretory pathway, component HofQ [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 443824 [Multi-domain] Cd Length: 570 Bit Score: 137.68 E-value: 4.13e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 305 IVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLHTTHGDvqiGNGQNALNGNTQ 384
Cdd:COG4796 289 VTVDERTNTLIVRDTPSKLEEIRRLIAKLDIPVRQVLIEARIVEASDSFSRELGVRWGGSGANGT---GNNRGGIGGSLN 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 385 YNGAGNPPLT--FGIGTSETGQTGAfmptgIALTasIGGSLRNYLLT-RVNALAQKGQAQLRSKPKVLALDNTEAILENL 461
Cdd:COG4796 366 GTTAGTPLLPdgLNVNLPAANPAGS-----LGLT--LAKLGGGRLLDlELSALEAEGKGEIISSPRVITADQQEASIEQG 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 462 TQfyvqVPgYQDSSlysvTTG-TSI---------KVTPMIVDEairnaaavsgnpQSVMMSIDI-QDgniVPGQAVSN-V 529
Cdd:COG4796 439 TE----IP-YQESS----SSGaTSVefkeavlslEVTPQITPD------------GRIILDLDVsKD---SPGETVAGgV 494
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1409814741 530 PVIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMErfyLL---TPRVVTSA 603
Cdd:COG4796 495 PAIDTKEIKTQVLVENGETVVLGGIYEQTESNSVDKVPFLGDIPLLGWLFKNTTKTDEKRE---LLifiTPRIVKDA 568
|
|
| CpaC |
COG4964 |
Flp pilus assembly protein, secretin CpaC [Intracellular trafficking, secretion, and vesicular ... |
340-605 |
2.92e-17 |
|
Flp pilus assembly protein, secretin CpaC [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 443990 [Multi-domain] Cd Length: 456 Bit Score: 84.92 E-value: 2.92e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 340 VEINVTIIDINEDSLDSLGIDWrlhtthgdvqignGQNALNGNTQYNGAGNPPLTFGIGTSETGQTGAFMPTGIALTASI 419
Cdd:COG4964 177 VMLKVRVAEVSRSVLKQLGINW-------------SGLGSSGGFSFGLLTGGLLSGLLGGATAGAFSGFGFGNASISATL 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 420 ggslrnylltrvNALAQKGQAQLRSKPKVLALDNTEA-IL---EnltqFYVQVPgyQDSSLYSVTT---GTSIKVTPMIV 492
Cdd:COG4964 244 ------------DALEQNGLARVLAEPNLTALSGETAsFLaggE----FPIPVA--QGDGTITVEYkefGVSLNFTPTVL 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 493 DE---AIRNAAAVSgnpqsvmmSIDIQDGNIVPGqavSNVPVIQQRNivTKTMID--EGKSLLIAGFNDDEVRLNKSGVP 567
Cdd:COG4964 306 SNgriSLKVAPEVS--------ELDPSNAVTLNG---ITIPGLTTRR--AETTVElrSGQSFAIAGLLSSNTRQNVSKVP 372
|
250 260 270
....*....|....*....|....*....|....*...
gi 1409814741 568 WLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSASM 605
Cdd:COG4964 373 GLGDIPILGALFRSRSFQRNETELVIIVTPYLVKPVSP 410
|
|
| IV |
PHA00019 |
phage assembly protein |
431-600 |
3.21e-15 |
|
phage assembly protein
Pssm-ID: 222772 [Multi-domain] Cd Length: 428 Bit Score: 78.32 E-value: 3.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 431 VNALAQKGQAQLRSKPKVLALDNTEAIL---ENLTQFYVQVPGYQDSSLYSVTT------GTSIKVTPMivdeairnaaa 501
Cdd:PHA00019 260 VKALENSSNSRVLSRPRILTLSGQSGYIsvgQNVPFVTGRVTGEAANVNNPFQTierkdvGVSLEVTPV----------- 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 502 VSGNPQsVMMSIDIQDGNIVPGQAVSNVPvIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKY 581
Cdd:PHA00019 329 VMGDGQ-LVLDIDTKADSLSDSTIASDII-TNQRSLQTTVQVKDGQTLLLGGLISSNNTDGDSSVPFLSKIPLIGWLFRS 406
|
170
....*....|....*....
gi 1409814741 582 TDKSGNHMERFYLLTPRVV 600
Cdd:PHA00019 407 KSDSNEQRTLYVLLTARVI 425
|
|
| hofQ |
PRK10560 |
outer membrane porin HofQ; Provisional |
305-603 |
1.01e-13 |
|
outer membrane porin HofQ; Provisional
Pssm-ID: 182549 [Multi-domain] Cd Length: 386 Bit Score: 73.31 E-value: 1.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 305 IVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRL-----HTTHGDVQIGNGQNAL 379
Cdd:PRK10560 120 MTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQVELAAHIVTINEKSLRELGVKWTLadaqqAGGVGQVTTLGSDLSV 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 380 NGNTQYNGagnppltFGIGtsetgqtgafmptgialtaSIGGSLRNYLLTrvnALAQKGQAQLRSKPKVLALDNTEAILE 459
Cdd:PRK10560 200 ATATTRVG-------FNIG-------------------RINGRLLDLELS---ALEQKQQLDIIASPRLLASHLQPASIK 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 460 NLTQfyvqVPgYQDSSLYSVTTGTSIK-------VTPMIVDEA-IRNAAAVSGNpqsvmmsidiqdgniVPGQAVSN--- 528
Cdd:PRK10560 251 QGSE----IP-YQVSSGESGATSVEFKeavlgmeVTPTVLQKGrIRLKLHISQN---------------VPGQVLQQadg 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 529 -VPVIQQRNIVTKTMIDEGKSLLIAG-FNddevRLNKSG---VPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSA 603
Cdd:PRK10560 311 eVLAIDKQEIETQVEVKSGETLALGGiFS----RKNKSGqdsVPLLGDIPWLGQLFRHDGKEDERRELVVFITPRLVSSE 386
|
|
| hofQ |
PRK13568 |
DNA uptake porin HofQ; |
305-603 |
1.14e-13 |
|
DNA uptake porin HofQ;
Pssm-ID: 237430 [Multi-domain] Cd Length: 381 Bit Score: 73.23 E-value: 1.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 305 IVADPAINAVIVRDLPENMYRYQSLIGQLDERPRIVEINVTIIDINEDSLDSLGIDWRLhtthGDVQIGNgqNALNGNtQ 384
Cdd:PRK13568 115 VTADKRTNTLLIRDTPAALAQLKNWLIELDLPLQQVQLAAHIVTISSESLQELGVRWGM----GEGKQGN--TALRIN-D 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 385 YN---GAGNPPLTFGIGTsetgqtgafmptgialtASIGGSLrnyLLTRVNALAQKGQAQLRSKPKVLALDNTEAILENL 461
Cdd:PRK13568 188 FNvnlPLPNPAASAGFHL-----------------ARLGGRL---LDLELSALEQENQVDIIASPRLFTSHQQTASIKQG 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409814741 462 TQfyvqVPgYQDSSLYSVTTGTSIK-------VTPMIvdeaIRNAaavsgnpqsvMMSIDIQDGNIVPGQAV----SNVP 530
Cdd:PRK13568 248 TE----IP-YTVSSGKSGSTSIEFKeavlgmeVTPKI----LRNG----------RITLKLKISQNMPGRTIkrgeGEML 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1409814741 531 VIQQRNIVTKTMIDEGKSLLIAGFNDDEVRLNKSGVPWLSDIPLIGNLFKYTDKSGNHMERFYLLTPRVVTSA 603
Cdd:PRK13568 309 AIDKQEIQTQVTVKDGETIVLGGIFQQQKRQSVNKVPLLGDIPLLGALFRQDTQQQSRRELVIFITPKLISAD 381
|
|
| Secretin_N |
pfam03958 |
Bacterial type II/III secretion system short domain; This is a short, often repeated, domain ... |
293-338 |
2.30e-06 |
|
Bacterial type II/III secretion system short domain; This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.
Pssm-ID: 461109 [Multi-domain] Cd Length: 68 Bit Score: 45.28 E-value: 2.30e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 1409814741 293 FSNNGGGDTLPQIVADPAINAVIVRDLPENMYRYQSLIGQLDERPR 338
Cdd:pfam03958 22 LGGSGLLSKRGSVVADPRTNSLIVSGPPEYVELVRQLIKQLDVPRA 67
|
|
| Secretin_N |
pfam03958 |
Bacterial type II/III secretion system short domain; This is a short, often repeated, domain ... |
126-189 |
1.05e-05 |
|
Bacterial type II/III secretion system short domain; This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.
Pssm-ID: 461109 [Multi-domain] Cd Length: 68 Bit Score: 43.74 E-value: 1.05e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1409814741 126 TQMIPIPPNASGEIGRALQAM----QIPDKRYTLVINDRANSVYVAGPRRYVELVRQAVGSVGDPSAN 189
Cdd:pfam03958 1 TRVIPLKYASAEDLASALRSLlggsGLLSKRGSVVADPRTNSLIVSGPPEYVELVRQLIKQLDVPRAQ 68
|
|
| |
