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Conserved domains on  [gi|1391836439|ref|XP_025032956|]
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zinc finger protein 501-like isoform X2 [Python bivittatus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
77-302 2.76e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.39  E-value: 2.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439  77 TSSLAFHQNLYMKQKPctfLNSGKNFSLSSHLISNKEEKMYECGKSF----NKKQLLILPPKIPPREKPYKCLQCGKSFT 152
Cdd:COG5048   224 SSSLPLTTNSQLSPKS---LLSQSPSSLSSSDSSSSASESPRSSLPTassqSSSPNESDSSSEKGFSLPIKSKQCNISFS 300

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 153 QRGNLIIHER--IHTGE--KPYIC--LVCGRRFTRSGHLTRHKRIHTGEKPYKC--TECGKTFS------LRDSVMRHKR 218
Cdd:COG5048   301 RSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSpllnnePPQSLQQYKD 380

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 219 LHAREKSYKSM-ECGKSVTHSSQLACHKRIHTGEKP--YKCLECGKSFNKSSCLTYHKRVHTgEKPYKCTECEKSFSQNS 295
Cdd:COG5048   381 LKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHT-NHAPLLCSILKSFRRDL 459


                  ....*..
gi 1391836439 296 HLTKHKR 302
Cdd:COG5048   460 DLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
252-388 7.24e-06

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 47.77  E-value: 7.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 252 KPYKCLECGKSFNKSSCLTYHKR--VHTGE--KPYKCTE--CEKSFSQNSHLTKHKRIHTGEKPYNCLEC-------GKS 318
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1391836439 319 FTYSSQLIYHKRIHTGEKPYKCL--ECGKSFSASSHLTYHKRVHTGEKP--YKCTECGKNFSQNSNLMKHKRIH 388
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIH 441
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
77-302 2.76e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.39  E-value: 2.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439  77 TSSLAFHQNLYMKQKPctfLNSGKNFSLSSHLISNKEEKMYECGKSF----NKKQLLILPPKIPPREKPYKCLQCGKSFT 152
Cdd:COG5048   224 SSSLPLTTNSQLSPKS---LLSQSPSSLSSSDSSSSASESPRSSLPTassqSSSPNESDSSSEKGFSLPIKSKQCNISFS 300

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 153 QRGNLIIHER--IHTGE--KPYIC--LVCGRRFTRSGHLTRHKRIHTGEKPYKC--TECGKTFS------LRDSVMRHKR 218
Cdd:COG5048   301 RSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSpllnnePPQSLQQYKD 380

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 219 LHAREKSYKSM-ECGKSVTHSSQLACHKRIHTGEKP--YKCLECGKSFNKSSCLTYHKRVHTgEKPYKCTECEKSFSQNS 295
Cdd:COG5048   381 LKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHT-NHAPLLCSILKSFRRDL 459


                  ....*..
gi 1391836439 296 HLTKHKR 302
Cdd:COG5048   460 DLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
252-388 7.24e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 47.77  E-value: 7.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 252 KPYKCLECGKSFNKSSCLTYHKR--VHTGE--KPYKCTE--CEKSFSQNSHLTKHKRIHTGEKPYNCLEC-------GKS 318
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1391836439 319 FTYSSQLIYHKRIHTGEKPYKCL--ECGKSFSASSHLTYHKRVHTGEKP--YKCTECGKNFSQNSNLMKHKRIH 388
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIH 441
zf-H2C2_2 pfam13465
Zinc-finger double domain;
184-208 2.50e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 2.50e-04
                          10        20
                  ....*....|....*....|....*
gi 1391836439 184 HLTRHKRIHTGEKPYKCTECGKTFS 208
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
296-321 1.46e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.46e-03
                          10        20
                  ....*....|....*....|....*.
gi 1391836439 296 HLTKHKRIHTGEKPYNCLECGKSFTY 321
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
77-302 2.76e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.39  E-value: 2.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439  77 TSSLAFHQNLYMKQKPctfLNSGKNFSLSSHLISNKEEKMYECGKSF----NKKQLLILPPKIPPREKPYKCLQCGKSFT 152
Cdd:COG5048   224 SSSLPLTTNSQLSPKS---LLSQSPSSLSSSDSSSSASESPRSSLPTassqSSSPNESDSSSEKGFSLPIKSKQCNISFS 300

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 153 QRGNLIIHER--IHTGE--KPYIC--LVCGRRFTRSGHLTRHKRIHTGEKPYKC--TECGKTFS------LRDSVMRHKR 218
Cdd:COG5048   301 RSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSpllnnePPQSLQQYKD 380

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 219 LHAREKSYKSM-ECGKSVTHSSQLACHKRIHTGEKP--YKCLECGKSFNKSSCLTYHKRVHTgEKPYKCTECEKSFSQNS 295
Cdd:COG5048   381 LKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHT-NHAPLLCSILKSFRRDL 459


                  ....*..
gi 1391836439 296 HLTKHKR 302
Cdd:COG5048   460 DLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
67-351 1.27e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.08  E-value: 1.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439  67 HQEHGQSISHTSSLAFHQNLYMKQKPCTFLNsgkNFSLSSHLISNKEEKMYECGKSFNKKQLLILPPKIPPREKPYKCLQ 146
Cdd:COG5048   189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQN---LENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL 265

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 147 CGKSFTQRGNLIIHERIHTG-EKPYICLVCGRRFTRSGHLTRHKR--IHTGE--KPYKCTE--CGKTFSLRDSVMRHKRL 219
Cdd:COG5048   266 PTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILL 345

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 220 H--AREKSYKSMECGKSVTHSSQLACHKRIHtgekpykcLECGKSFNKSSCLTYHKrvhtgekpykcteCEKSFSQNSHL 297
Cdd:COG5048   346 HtsISPAKEKLLNSSSKFSPLLNNEPPQSLQ--------QYKDLKNDKKSETLSNS-------------CIRNFKRDSNL 404

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1391836439 298 TKHKRIHTGEKPYNC--LECGKSFTYSSQLIYHKRIHTGEKPYKCLECGKSFSASS 351
Cdd:COG5048   405 SLHIITHLSFRPYNCknPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
252-388 7.24e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 47.77  E-value: 7.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 252 KPYKCLECGKSFNKSSCLTYHKR--VHTGE--KPYKCTE--CEKSFSQNSHLTKHKRIHTGEKPYNCLEC-------GKS 318
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1391836439 319 FTYSSQLIYHKRIHTGEKPYKCL--ECGKSFSASSHLTYHKRVHTGEKP--YKCTECGKNFSQNSNLMKHKRIH 388
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIH 441
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
140-390 1.89e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 46.61  E-value: 1.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 140 KPYKCLQCGKSFTQRGNLIIHERIHTGEKPYICLVCGR--RFTRSGHLTRHKRIHTGEKPYKC----------------T 201
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCdkSFSRPLELSRHLRTHHNNPSDLNskslplsnskasssslS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 202 ECGKTFS----------------------LRDSVMRHKRLHA-------------REKSYKSMECGKSVTHSSQLACHKR 246
Cdd:COG5048   112 SSSSNSNdnnllsshslppssrdpqlpdlLSISNLRNNPLPGnnsssvntpqsnsLHPPLPANSLSKDPSSNLSLLISSN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 247 IHTGEKPYKCLECGKSFNKSSCLTYHKRVHTGEKPYKCTE----CEKSFSQNSHLTKHKRIHTGEKP--YNCLECGKSFT 320
Cdd:COG5048   192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTnsqlSPKSLLSQSPSSLSSSDSSSSASesPRSSLPTASSQ 271

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1391836439 321 YSSQLIYHKRIHTG-EKPYKCLECGKSFSASSHLTYHKR--VHTGE--KPYKCTE--CGKNFSQNSNLMKHKRIHAG 390
Cdd:COG5048   272 SSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTS 348
zf-H2C2_2 pfam13465
Zinc-finger double domain;
184-208 2.50e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.74  E-value: 2.50e-04
                          10        20
                  ....*....|....*....|....*
gi 1391836439 184 HLTRHKRIHTGEKPYKCTECGKTFS 208
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
296-321 1.46e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.46e-03
                          10        20
                  ....*....|....*....|....*.
gi 1391836439 296 HLTKHKRIHTGEKPYNCLECGKSFTY 321
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
269-293 2.02e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.02e-03
                          10        20
                  ....*....|....*....|....*
gi 1391836439 269 LTYHKRVHTGEKPYKCTECEKSFSQ 293
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 334-388 2.89e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 2.89e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1391836439 334 GEKPYKC--LECGKSFSASSHLTYHKR-------------------VHTGEKPYKCTECGKNFsQNSNLMKHKRIH 388
Cdd:COG5189   346 DGKPYKCpvEGCNKKYKNQNGLKYHMLhghqnqklhenpspekmniFSAKDKPYRCEVCDKRY-KNLNGLKYHRKH 420
zf-H2C2_2 pfam13465
Zinc-finger double domain;
352-377 2.94e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.94e-03
                          10        20
                  ....*....|....*....|....*.
gi 1391836439 352 HLTYHKRVHTGEKPYKCTECGKNFSQ 377
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
325-348 3.44e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.44e-03
                          10        20
                  ....*....|....*....|....
gi 1391836439 325 LIYHKRIHTGEKPYKCLECGKSFS 348
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 278-357 4.00e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.32  E-value: 4.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 278 GEKPYKC--TECEKSFsQNSHLTKHKRIHTgekpynclECGKSFTYSSQLIYHKRIHTGEKPYKCLECGKSFSASSHLTY 355
Cdd:COG5189   346 DGKPYKCpvEGCNKKY-KNQNGLKYHMLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                  ..
gi 1391836439 356 HK 357
Cdd:COG5189   417 HR 418
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
293-388 4.12e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 4.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1391836439 293 QNSHLTKHKRIHTgekPYNCLECGKSFTYSSQLIYHKR--IHTGE--KPYKCLE--CGKSFSASSHLTYHKRVHTGEKPY 366
Cdd:COG5048   276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                          90       100
                  ....*....|....*....|....
gi 1391836439 367 KC--TECGKNFSQNSNLMKHKRIH 388
Cdd:COG5048   353 KEklLNSSSKFSPLLNNEPPQSLQ 376
zf-H2C2_2 pfam13465
Zinc-finger double domain;
244-265 5.25e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 5.25e-03
                          10        20
                  ....*....|....*....|..
gi 1391836439 244 HKRIHTGEKPYKCLECGKSFNK 265
Cdd:pfam13465   5 HMRTHTGEKPYKCPECGKSFKS 26
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 366-388 7.09e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 33.81  E-value: 7.09e-03
                          10        20
                  ....*....|....*....|...
gi 1391836439 366 YKCTECGKNFSQNSNLMKHKRIH 388
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 282-304 7.52e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 33.81  E-value: 7.52e-03
                          10        20
                  ....*....|....*....|...
gi 1391836439 282 YKCTECEKSFSQNSHLTKHKRIH 304
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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