|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.23e-149 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 424.62 E-value: 1.23e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 1 ASLITAMSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQW 80
Cdd:MTH00112 5 AKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 81 DITQLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTAL 160
Cdd:MTH00112 85 DITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 161 GGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVL 240
Cdd:MTH00112 165 GGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 241 MLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTL 320
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKNTL 324
|
330 340
....*....|....*....|..
gi 1383769843 321 TTALTTLSIMLLPLSPMILTTL 342
Cdd:MTH00112 325 TATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
7-342 |
1.25e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 353.73 E-value: 1.25e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 7 MSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLT 86
Cdd:MTH00135 11 FSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 87 HPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSgMAIASTALGGWMGL 166
Cdd:MTH00135 91 HPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLIT-LGLTSTLVGGWGGL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 167 NQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLS 246
Cdd:MTH00135 170 NQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 247 LAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTLTT-ALT 325
Cdd:MTH00135 250 LGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQLTLPLaIST 329
|
330
....*....|....*..
gi 1383769843 326 TLSIMLLPLSPMILTTL 342
Cdd:MTH00135 330 TATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-342 |
1.76e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 345.75 E-value: 1.76e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 1 ASLITAMSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQW 80
Cdd:MTH00070 5 ALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 81 DITQLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTAL 160
Cdd:MTH00070 85 TIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 161 GGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVL 240
Cdd:MTH00070 165 GGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMM 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 241 MLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTL 320
Cdd:MTH00070 245 MLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNL 324
|
330 340
....*....|....*....|..
gi 1383769843 321 TTALTTLSIMLLPLSPMILTTL 342
Cdd:MTH00070 325 LSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-340 |
2.38e-107 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 317.56 E-value: 2.38e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 1 ASLITAMSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQW 80
Cdd:MTH00105 5 ILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 81 DITQLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTAL 160
Cdd:MTH00105 85 TITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 161 GGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVL 240
Cdd:MTH00105 165 GGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 241 MLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTL 320
Cdd:MTH00105 245 LLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENTKPMT 324
|
330 340
....*....|....*....|.
gi 1383769843 321 TT-ALTTLSIMLLPLSPMILT 340
Cdd:MTH00105 325 LLpTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
2-342 |
3.12e-86 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 263.75 E-value: 3.12e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 2 SLITAMSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWD 81
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 82 ITQLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTALG 161
Cdd:MTH00200 86 ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 162 GWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLM 241
Cdd:MTH00200 166 GWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 242 LTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTLT 321
Cdd:MTH00200 246 LTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLV 325
|
330 340
....*....|....*....|.
gi 1383769843 322 TALTTLSIMLLPLSPMILTTL 342
Cdd:MTH00200 326 GLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
8-332 |
4.93e-76 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 237.52 E-value: 4.93e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 8 SLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTH 87
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 88 PTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTALGGWMGLN 167
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 168 QTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLSL 247
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 248 AGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKSVPTLTTALTTL 327
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSIL 331
|
....*
gi 1383769843 328 SIMLL 332
Cdd:MTH00041 332 SSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
2-339 |
4.74e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 183.10 E-value: 4.74e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 2 SLITAMSLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGqwd 81
Cdd:MTH00160 7 KLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM--- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 82 itqLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALlsgMAIASTALG 161
Cdd:MTH00160 84 ---LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNFIII---IIILSAIIG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 162 GWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLM 241
Cdd:MTH00160 158 AIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 242 LTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSpTNHMKQWQINKSVPTLT 321
Cdd:MTH00160 238 LNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNK-NKWNLKKKKNKFSLILN 316
|
330
....*....|....*...
gi 1383769843 322 TALTTLSIMLLPLSPMIL 339
Cdd:MTH00160 317 FLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
9-298 |
2.18e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 165.44 E-value: 2.18e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITqlthp 88
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 89 tscMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPI-TLLSLSSSSLNPALLSGMAIASTALGGWMGLN 167
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 168 QTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSlMTAWTKIPPLTTVLMLTLLSL 247
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1383769843 248 AGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATI 298
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
8-292 |
6.98e-43 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 151.09 E-value: 6.98e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 8 SLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSmtnawfTGQWDITQLTH 87
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 88 PTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIASTALGGWMGLN 167
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 168 QTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLSL 247
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1383769843 248 AGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL 292
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-294 |
8.35e-39 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 140.19 E-value: 8.35e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 8 SLLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMtnAWFTGQWditqlTH 87
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----LS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 88 PTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGmaIASTALGGWMGLN 167
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICS--VLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 168 QTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYSMMTTAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLSL 247
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1383769843 248 AGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 294
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-294 |
1.13e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.99 E-value: 1.13e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 10 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAVASTLLLF-SSMTNAwFTGQWDITQLTH 87
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 88 PTS------------CMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMK--------------FPPITLLSLS 141
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafaallrllveaFPGLAADWQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 142 SSSLnpallsgMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMIIILI-YNPM-LTLLTFYL--YSMMTTAIFLTLNA 217
Cdd:COG1007 271 LLAV-------LAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAaGTPLgVSAALFYLlaYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 218 -----TNTLKLSSLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:COG1007 344 lsrkgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
..
gi 1383769843 293 AY 294
Cdd:COG1007 424 VK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-292 |
4.05e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 105.29 E-value: 4.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 10 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTHP 88
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 89 TS------------CMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMK---FPPIT----LLSLSSSSLNPAL 149
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrllvVAFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 150 LSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTL--LTFYL--YSMMTTAIFLTL--------NA 217
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVIsllrrkggEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1383769843 218 TNTLKLSSLmtAWTKiPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:PRK05777 353 ESISDFAGL--SKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
9-292 |
4.27e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 101.26 E-value: 4.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAVASTLLLFS-------------SMTNA 74
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 75 WFTGQWDITQLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGma 154
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGG-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 155 IASTALGGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPM----LTLLTFYLYSMMTTAIFLTLNATNTLK--LSSLMT 228
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiqASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1383769843 229 AWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
19-282 |
1.32e-23 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 98.54 E-value: 1.32e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 19 SNHWMMAWAGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTHPTSCM----- 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 93 ------LLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMK------FPPITLLSLSSSSLNPALLSGMAIASTAL 160
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVkaggygLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 161 GGWMGLNQTQVRKILAFSSISHLGWMIIIL----IYNPMLTLLTFYLYSMMTTAIFL-----TLNATNTLKLSSLMTAWT 231
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1383769843 232 KIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLS 282
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-293 |
9.22e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 95.79 E-value: 9.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 10 LLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTHP 88
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 89 TSC------------MLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMK---FPPITLLSLSSSSLNPALLSGM 153
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 154 ----AIASTALGGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTL--LTFYL--YSMMTTAIFLTLNATNTLKLS- 224
Cdd:TIGR01770 272 laiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1383769843 225 ----SLMTAWTKIPPLTTVLMLTLL-SLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLA 293
Cdd:TIGR01770 352 ieyiSDFAGLFKTNPILAILILIFMfSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
9-292 |
8.59e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 92.77 E-value: 8.59e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDI----T 83
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 84 QLTHPTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPITLLSLSSSSLNPALLSgmAIASTALGGW 163
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 164 MGLNQTQVRKILAFSSISHLGWMIIILIYNP----MLTLLTFYLYSMMTTAIF---LTLNATNTLkLSSLMTAWTKIPPL 236
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSRKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1383769843 237 TTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-292 |
9.62e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.44 E-value: 9.62e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTH- 87
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 88 ---------PTSCMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFPPI--------TLLSLSSSSLNPALL 150
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVyailrvltLLFGADPALFLGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 151 SGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMII-ILIYNPM-LTLLTFYL--YSMMTTAIFLT----LNATNTLK 222
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLgLAGALFHLlnHALAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 223 LSSLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRL 292
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
11-292 |
4.40e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.05 E-value: 4.40e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 11 LGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAI---------EASTKYFLTQAVASTLLLFSSMTNAWFTGQ-- 79
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 80 --WDITQLTHPTS----------CMLLTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIMKFppITLLSLSSSSLNP 147
Cdd:MTH00198 279 mlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 148 ALLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMIIIL---IYNPMLTLLTFYLYSMMTTAIFLTL--------- 215
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagTYESLQASWTYAVTYLVSALASFTVictleefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 216 -------------NATNTLKLSSLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLS 282
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 1383769843 283 LLGL-------FFYLRL 292
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-318 |
2.12e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 61.56 E-value: 2.12e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 47 RAIEASTKYFLTQAVASTLLL--FSsmtnaWFTGQ-------WDI------TQLTHPTSC----MLLTAAISMKLGLVPF 107
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 108 HFWFPEVLQGS-----------SLMTSMLLATIM---KFPPITLLSLSSSSLnpallsgMAIASTALGGWMGLNQTQVRK 173
Cdd:CHL00049 234 HQWTPDVYEGSptpvvaflsvtSKVAASALATRIfdiPFYFSSNEWHLLLEI-------LAILSMILGNLIAITQTSMKR 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 174 ILAFSSISHLGWMIIILI-------YNPMLTLLTFYlysmmttaIFLTLNATNTLKLSSLMTA----------WTKIPPL 236
Cdd:CHL00049 307 MLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFY--------IFMNLGTFACIVLFGLRTGtdnirdyaglYTKDPFL 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 237 TTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNHMKQWQINKS 316
Cdd:CHL00049 379 ALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPL 458
|
..
gi 1383769843 317 VP 318
Cdd:CHL00049 459 RS 460
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-307 |
1.03e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 56.43 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 29 LEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFS-SMTNAwFTGQWDITQLTH--PTSCMLLTA------AIS 99
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTAfgfvllALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 100 MKLGLVPFHFWFPEVLQG-SSLMTSMLLATIMKFP---------PITLLSLSSSSLNPALLSGMAIASTALGGWMGLNQT 169
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyaliriyfTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 170 QVRKILAFSSISHLGWMII-ILIYNP-MLTLLTFYL--YSMMTTAIFLTLNA----TNTLKLSSLMTAWTKIPPLTTVLM 241
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLgLALLTPlALAAGLLHLlhHALMKGALFLAAGAievtYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1383769843 242 LTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYCATITLPPSPTNH 307
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-283 |
2.23e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 55.49 E-value: 2.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 29 LEINTLAILPLIS-KSHHPRAIEASTKYFLTQAVASTLLLFSSmtnAWFTGQWDITQLTHPTSCM-------------LL 94
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMsenptvvakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 95 TAAISMKLGLVPFHFWFPEVL-QGSSLMTSMLLAT-------IMKFPPITLLSLSSSSLNPALLSGMAIASTALGGWMGL 166
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVIkqaglyaLARVLFSIYGPAINLATVGWVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 167 NQTQVRKILAFSSISHLGWMII-----ILIYNPmlTLLTFYLYSMMTTAIFLTLN-----------------ATNTLKLS 224
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNhalykallfltagaviyETGTRNLN 384
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1383769843 225 SLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQE--LTKQELTTIATIITLLSL 283
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
45-288 |
3.73e-07 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 51.62 E-value: 3.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 45 HPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQW--DITQLTHPTSCM--------LLTAAISMKLGLVPFHFWFPEV 114
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLtaqlllflAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 115 LQGSSLMTSMLLATIMK--------------FPpitllslSSSSLNPALLSGMAIASTALGGWMGLNQTQVRKILAFSSI 180
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfalplFP-------EASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 181 SHLGWMII-ILIYNPM-LTLLTFYLYS--MMTTAIFLTLNA----TNTLKLSSLMTAWTKIPPLTTVLMLTLLSLAGLPP 252
Cdd:COG1008 309 SHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVGVlydrTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
250 260 270
....*....|....*....|....*....|....*.
gi 1383769843 253 LAGFLPKWLIIQELTKqelttIATIITLLSLLGLFF 288
Cdd:COG1008 389 TSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
30-294 |
4.29e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 51.54 E-value: 4.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 30 EINTLAILPLISKSHHpRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDIT-------QLTHPTSCM----LLTAAI 98
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALivflFLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 99 SMKLGLVPFHFWFPE-----------VLQGS-SLMTSMLLATIMKFPPITLLSLSSSSLNPALLSGMAIA-----STALG 161
Cdd:PRK08668 207 VAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAwlgniSIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 162 GWMGLNQTQVRKILAFSSISHLGWmiiILIYNPMLTLLTF-------YLYSMMTTAIFLTLNA----TNTLKLSSLMTAW 230
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHALFKGLFFLIFAAviyrTGTTKISEMGGLI 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1383769843 231 TKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAY 294
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
93-259 |
5.81e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 51.08 E-value: 5.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 93 LLTAAISmKLGLVPFHFWFPEVLQGSSLMTSMLLATIM---------KFPPitllSLSSSSLNPALLSGMAIASTALGGW 163
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAP----GFADVPVWRPTVLVLGLATMLLGGW 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 164 MGLNQTQVRKILAFSSISHLGWMIIILIY---NPMLTLLTFYL-YSMMTTAIFLTL----NATNTLKLSSLMTAWTKIPP 235
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIgtrDAALAGLAMLLaHALFKAALFLVVgiidHSTGTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 1383769843 236 LTTVLMLTLLSLAGLPPLAGFLPK 259
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
46-259 |
1.03e-06 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 50.05 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 46 PRAIEASTKYFLTQAVASTLLLF-SSMTNAWFTGQwdiTQL--------THPT-----SCMLLTAAISMKLGLVPFHFWF 111
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSlglalALVFVIAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 112 PEVLQGSSLMTSMLLATIMK--------------FPPITLLSLSSSSLnpallsgMAIASTALGGWMGLNQTQVRKILAF 177
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKaagfalairllvtaFPSFDEQWKLLFTA-------LAILSMVLGNVVALAQTSMKRMLAY 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 178 SSISHLGWMIIILI------YNPMLTLLTFYLYSMMT--TAIFLTLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLSLAG 249
Cdd:PRK02504 307 SSIGQAGFVMIGLVagteagYASMVFYLLAYLFMNLGafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGG 386
|
250
....*....|
gi 1383769843 250 LPPLAGFLPK 259
Cdd:PRK02504 387 IPPLAGFFGK 396
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
4-294 |
3.67e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.53 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 4 ITAMSLLlgtiitISSNHWMMAWAGLEINTLAILPLISKSHH-PRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDI 82
Cdd:COG1009 121 MAAMLGL------VLSDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 83 TQLTH------------PTSCMLLTAAISmKLGLVPFHFWFPEVLQG----SSLMTSmllAT--------IMKFPPITLL 138
Cdd:COG1009 195 SELLAaaptilssplltLILLLLLLGAFG-KSAQFPLHFWLPDAMEGptpvSALLHA---ATmvkagvylLARLSPLFAL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 139 SLSSSSLnpallsgMAI--ASTAL-GGWMGLNQTQVRKILAFSSISHLGWMIIIL---IYNPMLTLLtfylysmMTTAIF 212
Cdd:COG1009 271 SPVWLTV-------VAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYMFLALgvgAYVAALFHL-------LTHAFF 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 213 LTL---------NATNTL---KLSSLmtaWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQE-LTKQELTTIATIIT 279
Cdd:COG1009 337 KALlflgagsviHATGTRdirKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVA 413
|
330
....*....|....*.
gi 1383769843 280 LL-SLLGLFFYLRLAY 294
Cdd:COG1009 414 LLgAFLTAFYSFRLFF 429
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
287-336 |
5.28e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 40.32 E-value: 5.28e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1383769843 287 FFYLRLAYCATITLPPSPTNHMKQWQINKSVPTLTTALTT-LSIMLLPLSP 336
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTtLSILLLPLTP 51
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
30-304 |
2.47e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.71 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 30 EINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQ-----LTHPTSCMLLTAAISMKLGL 104
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 105 V------PFHFWFPEVLQGSSLMTSMLLATIMKFPPITLL--------SLSSSSLNPALLSGMAIASTALGGWMGLNQTQ 170
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMlvifklfgGLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 171 VRKILAFSSISHLGWMIIILIYNPMLTLLTFYLYS----MMTTAIFL----TLNATNTLKLSSLMTAWTKIPPLTTVLML 242
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1383769843 243 TLLSLAGLPPLAGFLPKWLIIQELTKQELTTIATIITLLSLLGLFFYLRLAYcaTITLPPSP 304
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKP 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
160-285 |
2.92e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.60 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 160 LGGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLY----SMMTTAIFLTL----NATNTLKLSSLMTAWT 231
Cdd:PRK12647 272 TGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAgiidHETGTRDITKLGGLRR 351
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1383769843 232 KIPPLTTVLMLTLLSLAGLPPLAGFLPKWLIIQELTkqELTTIATIITLLSLLG 285
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
153-263 |
4.06e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 42.03 E-value: 4.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 153 MAIASTALGGWMGLNQTQVRKILAFSSISHLGWMIIILIYNPMLTLLTFYLY----SMMTTAIFLTLNAT----NTLKLS 224
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLE 364
|
90 100 110
....*....|....*....|....*....|....*....
gi 1383769843 225 SLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLII 263
Cdd:PRK12662 365 DCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-288 |
5.73e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 41.46 E-value: 5.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 46 PRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQW----DITQLTHPTSCMLLT-----AAISMKLGLVPFHFWFPEVLQ 116
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 117 GSSLMTSMLLATIMK--------------FPPITLLSLSSSSLnpallsgMAIASTALGGWMGLNQTQVRKILAFSSISH 182
Cdd:TIGR01972 232 EAPTAGSVILAGVLLkmgtygflrfnlplFPDASLYFAPVLAA-------LGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 183 LGWMII-ILIYNP------MLTLLTFYLYSMmttAIFLTLNA----TNTLKLSSLMTAWTKIPPLTTVLMLTLLSLAGLP 251
Cdd:TIGR01972 305 MGFVLLgIFSFNElgisgaVFQMISHGLITA---ALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
250 260 270
....*....|....*....|....*....|....*..
gi 1383769843 252 PLAGFLPKWLIIQELTKqelttIATIITLLSLLGLFF 288
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
51-286 |
2.28e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 39.63 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 51 ASTKYFLTQAVASTLLLFSSMTNAWFTGQ--WDITQLTH---PTSCMLLT-----AAISMKLGLVPFHFWFPEVLQGSSL 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 121 MTSMLLATIM---------------------KFPPITLLslsssslnpallsgMAIASTALGGWMGLNQTQVRKILAFSS 179
Cdd:PRK12561 218 PVSMILAGVLlkmggyalirfnvqmlpdahvYFAPALAI--------------LGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 180 ISHLGWMII-------ILIYNPMLTLLTfylYSMMTTAIFL----TLNATNTLKLSSLMTAWTKIPPLTTVLMLTLLSLA 248
Cdd:PRK12561 284 VSHMGFVLLgiaaftdLGISGAMLQMIS---HGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASL 360
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1383769843 249 GLPPLAGFLPKWLIIQELTKQEL--TTIATIITLLSLLGL 286
Cdd:PRK12561 361 ALPGMSGFVSELTVFLGITSSDVysSTFRTITILLAAVGL 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
25-300 |
3.41e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 39.26 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 25 AWaglEINTLAILPLISKSHhPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTHPTS-----------CML 93
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 94 LTAAISMKLGLVPFHFWFPEVLQGSSLMTSMLLATIM---------KFPPItlLSLSSSSLNPALLSGMAIAstALGGWM 164
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVvkagiylllRFSPV--FHDVAVWNWLLIIVGMITA--LMGAVF 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 165 GLNQTQVRKILAFSSISHLGWMI-IILIYNPM-LT--LLTFYLYSMMTTAIFLTL----NATNTLKLSSLMTAWTKIPPL 236
Cdd:PRK12650 290 AVQKTDLKKLTAYSTVSQLGWIVaTIGVGTPFaLTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFT 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1383769843 237 TTVLMLTLLSLAGLPPLAGFLPKWLIIQELTKQELTTiATIITLLSLLGLFFYLRLAYCATITL 300
Cdd:PRK12650 370 FVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-267 |
3.64e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 39.16 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 29 LEINTLAILPLISKSHHPRAIEASTKYFLTQAVASTLLLFSSMTNAWFTGQWDITQLTH--PTSCMLLTAAISMKLGLVP 106
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 107 FHFWFPEVLQGSSLMTSMLLATIMK----FPPITLLSLSSSSLNPALLSGmaIASTALGGWMGLNQTQVRKILAFSSISH 182
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLIVRIFG--VGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 183 LGWMIIILIYNPMLTLLtfylYSMMTTAIFL---TLNATNTLKLSSLMTA-WTKIPplttvLMLTLLSLAGLPPLAGFLP 258
Cdd:PRK07234 281 LGFILAAPLVGGLYALA----HGLVKSTLFLcagALPSRNFTELISQMLGiGKWIP-----LTMASFSIAGFPLLAGFVS 351
|
....*....
gi 1383769843 259 KWLIIQELT 267
Cdd:PRK07234 352 KVLTLKNLL 360
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-186 |
3.85e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 38.76 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFL------TQAVASTLLLFSSMTnawftgqwdi 82
Cdd:PRK06458 117 FLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAA---------- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 83 TQLTHPTSCMLLTAAISM----------------------KLGLVPFHFWFPE-----------VLQGsSLMTSMLLATI 129
Cdd:PRK06458 187 TVMGDGEMAILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSG-VLLNVALYAVL 265
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1383769843 130 MKFppITLLSLSSSSLNPALLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWM 186
Cdd:PRK06458 266 RYY--ILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
9-188 |
5.71e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 38.58 E-value: 5.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 9 LLLGTIITISSNHWMMAWAGLEINTLAILPLISKSHHPRAIEASTKYFLTQAVA------STLLLFSSMTNAWFTGQWDI 82
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 83 TQLTHPTS----CMLLTAAISM------KLGLVPFHFWFPEV-LQGSSLMTSMLLATIMKFPPITLLSLSSSS------- 144
Cdd:PRK08676 191 TELAAHASllspSVLGASFLFIfigflaKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSALLrqsgaae 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1383769843 145 LNPALLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMII 188
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
49-289 |
5.97e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 38.39 E-value: 5.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 49 IEASTKYFLTQAVASTLLL---------FSSMTNAWFTGQWDITQLTHP--TSCMLLTAAISMKLGLVPFhFWFPEVLQG 117
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATltTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 118 SSLMTSMLLATIMK-------FPPITLLSLSSSSLNPALLSGMAIASTALGGWMGLNQTQVRKILAFSSISHLGWMII-I 189
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1383769843 190 LIYNPM-LTLLTFYLYSMMT--TAIFLTLNATNTL----KLSSLMTAWTKIPPLTTVLMLTLLSLAGLPPLAGFLPKWLI 262
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|...
gi 1383769843 263 IQ-ELTKQE-----LTTIATIITLLSLLGLFFY 289
Cdd:PRK12663 396 VQgALDNGAyillaLMLITSLITMYSLFRIFFL 428
|
|
|