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Conserved domains on  [gi|1345500311|gb|AVF95956|]
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galactokinase [Vibrio diabolicus]

Protein Classification

galactokinase( domain architecture ID 11480374)

galactokinase catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK05101 PRK05101
galactokinase; Provisional
4-383 0e+00

galactokinase; Provisional


:

Pssm-ID: 179937 [Multi-domain]  Cd Length: 382  Bit Score: 784.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   4 LIQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQ 83
Cdd:PRK05101    3 LKQKTQSLFAQQFGYPPTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRVIAADYDNQQDEFSLDA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKMWANYIRGVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:PRK05101   83 PIVPHPEQQWANYVRGVVKHLQERNPDFGGADLVISGNVPQGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPEEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKAL 243
Cdd:PRK05101  163 NQFVGCNCGIMDQLISALGKKDHALLIDCRSLETKAVPMPEGVAVVIINSNVKRGLVDSEYNTRRQQCETAARFFGVKAL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 244 RDVTIEQFNEKVAELDEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEV 323
Cdd:PRK05101  243 RDVTLEQFNAVAAELDPVVAKRARHVITENARTLEAASALAAGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAV 322
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 324 IGDQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLV 383
Cdd:PRK05101  323 IGDQGGVRMTGGGFGGCIVALVPEELVEAVRQAVAEQYEAKTGLKETFYVCKASQGAGQC 382
 
Name Accession Description Interval E-value
PRK05101 PRK05101
galactokinase; Provisional
4-383 0e+00

galactokinase; Provisional


Pssm-ID: 179937 [Multi-domain]  Cd Length: 382  Bit Score: 784.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   4 LIQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQ 83
Cdd:PRK05101    3 LKQKTQSLFAQQFGYPPTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRVIAADYDNQQDEFSLDA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKMWANYIRGVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:PRK05101   83 PIVPHPEQQWANYVRGVVKHLQERNPDFGGADLVISGNVPQGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPEEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKAL 243
Cdd:PRK05101  163 NQFVGCNCGIMDQLISALGKKDHALLIDCRSLETKAVPMPEGVAVVIINSNVKRGLVDSEYNTRRQQCETAARFFGVKAL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 244 RDVTIEQFNEKVAELDEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEV 323
Cdd:PRK05101  243 RDVTLEQFNAVAAELDPVVAKRARHVITENARTLEAASALAAGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAV 322
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 324 IGDQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLV 383
Cdd:PRK05101  323 IGDQGGVRMTGGGFGGCIVALVPEELVEAVRQAVAEQYEAKTGLKETFYVCKASQGAGQC 382
GalK COG0153
Galactokinase [Carbohydrate transport and metabolism];
4-384 0e+00

Galactokinase [Carbohydrate transport and metabolism];


Pssm-ID: 439923 [Multi-domain]  Cd Length: 380  Bit Score: 598.29  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   4 LIQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVdEFDITq 83
Cdd:COG0153     1 RLERLIEAFEEAFGEEPEGVFSAPGRVNLIGEHTDYNGGFVLPAAIDRGTYAAARPRDDRKVRVYSADFDEEV-EFDLD- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKMWANYIRGVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:COG0153    79 DLEPGEEDGWANYVRGVAWALQERGYKLGGFDLVIDGDVPLGAGLSSSAALEVAVALALNDLFGLGLDPVELAKIGQRAE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMP-EEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKA 242
Cdd:COG0153   159 NEFVGVPCGIMDQFASALGKKGHALLLDCRSLEYEYVPLPlEGYALVIVDTNVKHSLADSEYNERRAECEAAAAILGVKS 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 243 LRDVTIEQFNEKVAEL-DEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVK 321
Cdd:COG0153   239 LRDVTLEDLEAARARLgDEVLRRRARHVVTENQRVLEAVEALRAGDLEAFGKLMNASHASLRDDYEVSCPELDTLVELAL 318
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1345500311 322 EVIGdQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLVE 384
Cdd:COG0153   319 AEAG-VLGARMTGGGFGGCTIALVPKDAVDEFIEAVAEAYAEKTGLEPDFYVVKPSDGARRLA 380
gal_kin TIGR00131
galactokinase; Galactokinase is a member of the GHMP kinases (Galactokinase, Homoserine kinase, ...
5-381 6.48e-173

galactokinase; Galactokinase is a member of the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase) and shares with them an amino-terminal domain probably related to ATP binding.The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity. [Energy metabolism, Sugars]


Pssm-ID: 272924 [Multi-domain]  Cd Length: 386  Bit Score: 487.41  E-value: 6.48e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   5 IQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQA 84
Cdd:TIGR00131   1 CESIQKIFASAFGAKPDFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRIYLANADNKFAERSLDLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  85 ITFQQDKMWANYIRGVVKCLLARGYQF-TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:TIGR00131  81 LDGSEVSDWANYFKGVLHVAQERFNSFpLGADIVCSGNVPTGSGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPE-EMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVK- 241
Cdd:TIGR00131 161 NHFVGVNCGIMDQAASVLGKEDHALLVECRSLKATPFKFPQlGIAFVIANTNVKRTLAPSNYNTRRQECTTAANFLAATd 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 242 --ALRDVTIEQFNEKVAELDEM---VAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTL 316
Cdd:TIGR00131 241 kgALRDFMNEYFARYIARLTKMlplVEERAKHVVSENLRVLKAVKAMKDNDFKQFGALMNESHASCDDDYECTCPEIDEL 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1345500311 317 VEIVKEVIGdQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAG 381
Cdd:TIGR00131 321 VCSAALVNG-SGGSRMTGAGFGGCTVHLVPNENVDKVRQAVADKYPKKTGLELTFYVIVSKPGAG 384
GalKase_gal_bdg pfam10509
Galactokinase galactose-binding signature; This is the highly conserved galactokinase ...
10-59 1.47e-21

Galactokinase galactose-binding signature; This is the highly conserved galactokinase signature sequence which appears to be present in all galactokinases irrespective of how many other ATP binding sites, etc that they carry. The function of this domain appears to be to bind galactose, and the domain is normally at the N-terminus of the enzymes, EC:2.7.1.6. This domain is associated with the families GHMP_kinases_C, pfam08544 and GHMP_kinases_N, pfam00288.


Pssm-ID: 463125 [Multi-domain]  Cd Length: 50  Bit Score: 86.74  E-value: 1.47e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1345500311  10 ASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAK 59
Cdd:pfam10509   1 EAFEELFGKEPVGVASAPGRVNLIGEHTDYNGGFVLPAAINLDTYVAVSP 50
 
Name Accession Description Interval E-value
PRK05101 PRK05101
galactokinase; Provisional
4-383 0e+00

galactokinase; Provisional


Pssm-ID: 179937 [Multi-domain]  Cd Length: 382  Bit Score: 784.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   4 LIQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQ 83
Cdd:PRK05101    3 LKQKTQSLFAQQFGYPPTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRVIAADYDNQQDEFSLDA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKMWANYIRGVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:PRK05101   83 PIVPHPEQQWANYVRGVVKHLQERNPDFGGADLVISGNVPQGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPEEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKAL 243
Cdd:PRK05101  163 NQFVGCNCGIMDQLISALGKKDHALLIDCRSLETKAVPMPEGVAVVIINSNVKRGLVDSEYNTRRQQCETAARFFGVKAL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 244 RDVTIEQFNEKVAELDEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEV 323
Cdd:PRK05101  243 RDVTLEQFNAVAAELDPVVAKRARHVITENARTLEAASALAAGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAV 322
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 324 IGDQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLV 383
Cdd:PRK05101  323 IGDQGGVRMTGGGFGGCIVALVPEELVEAVRQAVAEQYEAKTGLKETFYVCKASQGAGQC 382
GalK COG0153
Galactokinase [Carbohydrate transport and metabolism];
4-384 0e+00

Galactokinase [Carbohydrate transport and metabolism];


Pssm-ID: 439923 [Multi-domain]  Cd Length: 380  Bit Score: 598.29  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   4 LIQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVdEFDITq 83
Cdd:COG0153     1 RLERLIEAFEEAFGEEPEGVFSAPGRVNLIGEHTDYNGGFVLPAAIDRGTYAAARPRDDRKVRVYSADFDEEV-EFDLD- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKMWANYIRGVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:COG0153    79 DLEPGEEDGWANYVRGVAWALQERGYKLGGFDLVIDGDVPLGAGLSSSAALEVAVALALNDLFGLGLDPVELAKIGQRAE 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMP-EEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKA 242
Cdd:COG0153   159 NEFVGVPCGIMDQFASALGKKGHALLLDCRSLEYEYVPLPlEGYALVIVDTNVKHSLADSEYNERRAECEAAAAILGVKS 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 243 LRDVTIEQFNEKVAEL-DEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVK 321
Cdd:COG0153   239 LRDVTLEDLEAARARLgDEVLRRRARHVVTENQRVLEAVEALRAGDLEAFGKLMNASHASLRDDYEVSCPELDTLVELAL 318
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1345500311 322 EVIGdQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLVE 384
Cdd:COG0153   319 AEAG-VLGARMTGGGFGGCTIALVPKDAVDEFIEAVAEAYAEKTGLEPDFYVVKPSDGARRLA 380
gal_kin TIGR00131
galactokinase; Galactokinase is a member of the GHMP kinases (Galactokinase, Homoserine kinase, ...
5-381 6.48e-173

galactokinase; Galactokinase is a member of the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase) and shares with them an amino-terminal domain probably related to ATP binding.The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity. [Energy metabolism, Sugars]


Pssm-ID: 272924 [Multi-domain]  Cd Length: 386  Bit Score: 487.41  E-value: 6.48e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   5 IQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQA 84
Cdd:TIGR00131   1 CESIQKIFASAFGAKPDFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRIYLANADNKFAERSLDLP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  85 ITFQQDKMWANYIRGVVKCLLARGYQF-TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAE 163
Cdd:TIGR00131  81 LDGSEVSDWANYFKGVLHVAQERFNSFpLGADIVCSGNVPTGSGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 164 NEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPE-EMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVK- 241
Cdd:TIGR00131 161 NHFVGVNCGIMDQAASVLGKEDHALLVECRSLKATPFKFPQlGIAFVIANTNVKRTLAPSNYNTRRQECTTAANFLAATd 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 242 --ALRDVTIEQFNEKVAELDEM---VAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTL 316
Cdd:TIGR00131 241 kgALRDFMNEYFARYIARLTKMlplVEERAKHVVSENLRVLKAVKAMKDNDFKQFGALMNESHASCDDDYECTCPEIDEL 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1345500311 317 VEIVKEVIGdQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAG 381
Cdd:TIGR00131 321 VCSAALVNG-SGGSRMTGAGFGGCTVHLVPNENVDKVRQAVADKYPKKTGLELTFYVIVSKPGAG 384
PRK05322 PRK05322
galactokinase; Provisional
5-380 4.17e-144

galactokinase; Provisional


Pssm-ID: 235407 [Multi-domain]  Cd Length: 387  Bit Score: 414.26  E-value: 4.17e-144
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   5 IQNVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNA-VDEFDITQ 83
Cdd:PRK05322    3 KEELKKKFAEVFGEEAEDVFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDDKKVRLYSANFEDLgIIEFDLDD 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 aITFQQDKMWANYIRGVVKCLLARGYQF-TGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQA 162
Cdd:PRK05322   83 -LSFDKEDDWANYPKGVLKFLQEAGYKIdHGFDILIYGNIPNGAGLSSSASIELLTGVILKDLFNLDLDRLELVKLGQKT 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 163 ENEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMP-EEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIF--- 238
Cdd:PRK05322  162 ENEFIGVNSGIMDQFAIGMGKKDHAILLDCNTLEYEYVPLDlGDYVIVIMNTNKRRELADSKYNERRAECEKALEELqkk 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 239 -GVKALRDVTIEQFnEKVAEL--DEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDT 315
Cdd:PRK05322  242 lDIKSLGELTEEEF-DEYSYLikDETLLKRARHAVTENQRTLKAVKALKAGDLEKFGRLMNASHVSLRDDYEVTGLELDT 320
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1345500311 316 LVEIVKEvigdQGGV---RMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGA 380
Cdd:PRK05322  321 LVEAAWK----QEGVlgaRMTGAGFGGCAIAIVKKDKVEAFKENVGKAYEEKIGYAASFYVAEIGDGA 384
PRK03817 PRK03817
galactokinase; Provisional
24-384 1.03e-109

galactokinase; Provisional


Pssm-ID: 235163 [Multi-domain]  Cd Length: 351  Bit Score: 325.41  E-value: 1.03e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  24 IQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVrvvsvdYGNAVDEfditqAITFQQDKM-----WANYIR 98
Cdd:PRK03817    3 VKSPGRVNLIGEHTDYNDGYVLPFAINLYTFLEIEKSEKFIF------YSENFNE-----EKTFELDKLeklnsWADYIK 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  99 GVVKCLLARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGCNCGIMDQMI 178
Cdd:PRK03817   72 GVIWVLEKRGYEVGGVKGKVSSNLPIGAGLSSSASLEVAVAYALNEAYNLNLSKLELALLAREAENEFVGVPCGIMDQFA 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 179 SAEGRENHAMLLDCRSLETESVSMPEEMAVVIINSNKKRGLVDSEYNTRRQQCEEAARIFGVKALRDVTIEQFNekvaEL 258
Cdd:PRK03817  152 VAFGKKDHAIFLDTMTLEYEYVPFPEDYEILVFDTGVKRELASSEYNERRQECEEALKILGKKSSKEVTEEDLS----KL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 259 DEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEVigDQGGVRMTGGGFG 338
Cdd:PRK03817  228 PPLLRKRAGYVLRENERVLKVRDALKEGDIETLGELLTESHWDLADNYEVSCEELDFFVEFALEL--GAYGARLTGAGFG 305
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1345500311 339 GCIVALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAGLVE 384
Cdd:PRK03817  306 GSAIALVDKGKFESIGEELLEEYKKRFGIDPKYFVVESSDGVRKIE 351
PRK00555 PRK00555
galactokinase; Provisional
26-381 1.52e-87

galactokinase; Provisional


Pssm-ID: 179063 [Multi-domain]  Cd Length: 363  Bit Score: 269.04  E-value: 1.52e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  26 APGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDefdITQAITFQQDKMWANYIRGVVKCLL 105
Cdd:PRK00555    7 APGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTDAITASSDRADGSAR---IPLDTTPGQVTGWAAYAAGVIWALR 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 106 ARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGCNCGIMDQMISAEGREN 185
Cdd:PRK00555   84 GAGHPVPGGAMSITSDVEIGSGLSSSAALECAVLGAVGAATGTRIDRLEQARLAQRAENEYVGAPTGLLDQLAALFGAPK 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 186 HAMLLDCRSLETESVSM-PEEMAVVI--INSNKKRGLVDSEYNTRRQQCEEAARIFGVKALRDVTIEQFNEKVAELDEMV 262
Cdd:PRK00555  164 TALLIDFRDLTVRPVAFdPDAAGVVLllMDSRARHRHAGGEYAARRASCERAAADLGVSSLRAVQDRGLAALGAIADPID 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 263 AKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEivKEVIGDQGGVRMTGGGFGGCIV 342
Cdd:PRK00555  244 ARRARHVLTENQRVLDFAAALADSDFTAAGQLLTASHASMRDDFEITTERIDLIAD--SAVRAGALGARMTGGGFGGCVI 321
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1345500311 343 ALVPPALVDDVKAAVEAKYQAATGLKESIYVCQAKNGAG 381
Cdd:PRK00555  322 ALVPADRAEDVADTVRRAAVTAGYPEPAVSRTYAAPGAG 360
PLN02521 PLN02521
galactokinase
7-361 1.52e-56

galactokinase


Pssm-ID: 215285 [Multi-domain]  Cd Length: 497  Bit Score: 192.62  E-value: 1.52e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311   7 NVKASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKRE-DNIVRVVSVD--YGNAVDEFDITQ 83
Cdd:PLN02521   34 RLKAAFVEVYGAKPDLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRRAEgSKKLRIANVNdkYTTCTFPADPDQ 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  84 AITFQQDKmWANYI----RGVVKCLLARGYQF---TGADISVSGNVPQGAGLSSSAALevVIGQTFKVL--FNLEISQAE 154
Cdd:PLN02521  114 EVDLANHK-WGNYFicgyKGVFEFLKSKGVDVgppVGLDVVVDGTVPTGSGLSSSAAL--VCSAAIAIMaaLGLNFTKKE 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 155 IALNGQQAEnEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMPEEMAVVIINS---NKKRGLVDSEYNTRRQQC 231
Cdd:PLN02521  191 VAQFTCKCE-RHIGTQSGGMDQAISIMAQQGVAKLIDFNPVRATDVQLPAGGTFVIANSlaeSNKAVTAATNYNNRVVEC 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 232 EEAARIFGVK-------------ALRDV-----------------------------TIEQFNEKVAE-LDEMVA----- 263
Cdd:PLN02521  270 RLAAIVLAVKlgmsaeeaiskvkTLSDVeglcvsfagshgssdpavavkellhegpyTAEEIEEILGEsLTSIFKnspts 349
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 264 -------------KRARHVITENDRTV----EAAQALRAHD-MKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEviG 325
Cdd:PLN02521  350 lavlkaakhfklhQRAVHVYSEAKRVHafrdTVSSSLSEEEkLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRD--N 427
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1345500311 326 DQGGVRMTGGGFGGCIVALVPPALVDDVKAAVEAKY 361
Cdd:PLN02521  428 GALGARLTGAGWGGCAVALVKEAIVPQFILALKEKF 463
PTZ00290 PTZ00290
galactokinase; Provisional
26-383 6.91e-46

galactokinase; Provisional


Pssm-ID: 240347 [Multi-domain]  Cd Length: 468  Bit Score: 163.84  E-value: 6.91e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  26 APGRVNLIGEHTDYNDGFVLPCAIHYQT--VVAAAKR-EDNIVRVVSVDygnavDE-FDITQAITFQQDKMWANYIRGVV 101
Cdd:PTZ00290   42 APGRVNFIGEHVDYMGGYVCPAAVLEGChiLVGRVKHfCDHKLRFATET-----DEhFVLDHLGGAKHNKAWTTFVRGAA 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 102 KCLLAR-GYQFTGADIS-----VSGNVPQGAGLSSSAALEVVI-------------------GQTFKVLFNLEISQ-AEI 155
Cdd:PTZ00290  117 TLRLNRlGVAIDAPSLQgvcmvVHGTLPMGAGMSASASFGVALlnaintvvtrrykgcptspGRRYSILPPMSKEElIEL 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 156 ALNGQQAENEFVGCNCGIMDQMISAEGRENHAMLLDCRSLETESVSMP----EEMAVVIINSNKKRGLVDSE---YNTRR 228
Cdd:PTZ00290  197 AKQARRIETEFCGVNVGIMDQFISAFAEEDKFMFLDCKSLTFESHDMTpllgDGACFLLIDSMIKHDLLGGTagmYNTVR 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 229 QQCEEAARIFGVKALR------------------DVTIEQFnekVAELDEMVA----KRARHVITENDRTVE------AA 280
Cdd:PTZ00290  277 SDQEGAQKKIGKHRYRgkpftfsdlvrnpkkytfDGDVVAF---MESCKPLMTpgefERGTYNIMEQIRTLEfiklndPE 353
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 281 QAL-RAHDMKRMGELMAESHASMRDDFEITVKEIDTLVEIVKEVIGDQGGvRMTGGGFGGCIVALVPPALVDDVKAAVEA 359
Cdd:PTZ00290  354 LPLsREERFRKAGEILNAGHQGMRDLMKITTPELDFIHELINEEKGVAGG-RMMGGGFGGCIILLLKKNAVDRVVAHVRE 432
                         410       420
                  ....*....|....*....|....
gi 1345500311 360 KYQAATGLKESIYVCQAKNGAGLV 383
Cdd:PTZ00290  433 KFKARFGVENDVYPVVAGDGAFVV 456
PLN02865 PLN02865
galactokinase
23-380 2.77e-39

galactokinase


Pssm-ID: 215466 [Multi-domain]  Cd Length: 423  Bit Score: 144.94  E-value: 2.77e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  23 IIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVdEF---DITQAITFQQDKM-----WA 94
Cdd:PLN02865   32 VVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDPEVLLRSAQFEGEV-RFrvdEIQHPIANVSSDSkeesnWG 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  95 NYIRGVVKCLLARGYQFTGADISVSGNVP--QGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGCNCG 172
Cdd:PLN02865  111 DYARGAVYALQSRGHALSQGITGYISGSEglDSSGLSSSAAVGVAYLLALENANNLTVSPEDNIELDRLIENEYLGLRNG 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 173 IMDQMISAEGRENHAMLLDCRSLETESVSMPEE-------MAVVIINSNKKRGLVDSE-YNTRRQQCEEAARIFgVKA-- 242
Cdd:PLN02865  191 ILDQSAILLSRYGCLTFMDCKTLDHKLVSLQFQqpggekpFKILLAFSGLRHALTNKPgYNLRVSECQEAARFL-LEAsg 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 243 -------LRDVTIEQFNEKVAELDEMVAKRARHVITENDRTVEAAQALRAHDMKRMGELMAESHASMRDDFEITVKEIDT 315
Cdd:PLN02865  270 ndeleplLCNVEPEVYEAHKCKLEAVLARRAEHYFSENMRVIKGVEAWASGNLEEFGKLISASGLSSIENYECGCEPLIQ 349
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1345500311 316 LVEIVKEVIGDQGGvRMTGGGFGGCIVALVPPALVDDVKAAVEAKYQAA-------TGLKESIYVCQAKNGA 380
Cdd:PLN02865  350 LYEILLKAPGVYGA-RFSGAGFRGCCVAFVDAEMAEEAASFVRDEYEKAqpelasnINGDKPVLICEAGDCA 420
ERG12 COG1577
Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway ...
26-345 1.45e-24

Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 441185 [Multi-domain]  Cd Length: 277  Bit Score: 101.46  E-value: 1.45e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  26 APGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVRVVSVDYGNAVDEFDITQAITfqqdkmwaNYIRGVVKCLL 105
Cdd:COG1577     1 APGKLILFGEHAVVYGQPAIAVAVDRRATVTVEPSDDDKLRIESPDLGGTLDLDPLADAAL--------RYIKAAIEAAL 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 106 AR-GYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGcNCGIMDQMISAEGre 184
Cdd:COG1577    73 EYlGLPLKGFDIEIDSEIPRKRGLGSSAAVAVAVIRALAAFYGVELSKEELFKLALEAEKIVHG-NPSGLDTAASTYG-- 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 185 nHAMLLDcRSLETESVSMPEEMAVVIINSNKKRglvdseyNTRrqqceeaarifgvkalrdvtieQFNEKVAELDEMVAK 264
Cdd:COG1577   150 -GPIYYQ-RGDRAEPLELPKNLPLVVGDTGVPA-------STK----------------------ELVAKVRKLKERNPE 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 265 RARHVITENDRTVEAA-QALRAHDMKRMGELMAESHAsMRDDFEITVKEIDTLVEIVKEViGDQGGvRMTGGGFGGCIVA 343
Cdd:COG1577   199 LYEAFLEEIGDLVEEAiEALEEGDLEALGELMNENHG-LLRALGVSTPELDRLVEAARKA-GALGA-KLTGAGGGGCVIA 275

                  ..
gi 1345500311 344 LV 345
Cdd:COG1577   276 LA 277
GalKase_gal_bdg pfam10509
Galactokinase galactose-binding signature; This is the highly conserved galactokinase ...
10-59 1.47e-21

Galactokinase galactose-binding signature; This is the highly conserved galactokinase signature sequence which appears to be present in all galactokinases irrespective of how many other ATP binding sites, etc that they carry. The function of this domain appears to be to bind galactose, and the domain is normally at the N-terminus of the enzymes, EC:2.7.1.6. This domain is associated with the families GHMP_kinases_C, pfam08544 and GHMP_kinases_N, pfam00288.


Pssm-ID: 463125 [Multi-domain]  Cd Length: 50  Bit Score: 86.74  E-value: 1.47e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1345500311  10 ASFEQVLGYAPSHIIQAPGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAK 59
Cdd:pfam10509   1 EAFEELFGKEPVGVASAPGRVNLIGEHTDYNGGFVLPAAINLDTYVAVSP 50
mevalon_kin TIGR00549
mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate ...
26-344 9.55e-19

mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate pathway of isopentanyl pyrophosphate (IPP) biosynthesis. IPP is a common intermediate for a number of pathways including cholesterol biosynthesis. This model covers enzymes from eukaryotes, archaea and bacteria. The related enzyme from the same pathway, phosphmevalonate kinase, serves as an outgroup for this clade. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped. [Central intermediary metabolism, Other]


Pssm-ID: 273130 [Multi-domain]  Cd Length: 273  Bit Score: 85.04  E-value: 9.55e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  26 APGRVNLIGEHTdyndgfvlpcAIHYQTVVAAAKreDNIVRVVSVDYGNavDEFDITQAITFQQDKMWANY--IRGVVKC 103
Cdd:TIGR00549   1 APGKIILFGEHA----------VVYGEPAIAAPI--PLRTTVTVIESSD--GSFIESDLGRGSLDDAPDELdgLKYVLAE 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 104 LLAR--GYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGCNCGImDQMISAE 181
Cdd:TIGR00549  67 FLSRfsELNPPPLEITIESEIPPGRGLGSSAAVAVALIRALADYFGSELSKEELAELANEAEKIAHGKPSGI-DTATSTS 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 182 GRenhaMLLDCRSLETESVSMPEEMAVVIINSNKKRglvdseyNTRrqqceEAARifGVKALRDVTIEQFNEKVAELDEM 261
Cdd:TIGR00549 146 GG----PVYFEKGEGEFTKLISLDGYFVIADTGVSG-------STK-----EAVA--RVRQLLERFPELIDSIMDAIGEL 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 262 VAkrarhvitendrtvEAAQALRAHDMKRMGELMAESHASMrDDFEITVKEIDTLVEIVKEviGDQGGVRMTGGGFGGCI 341
Cdd:TIGR00549 208 TL--------------EAKAALQDGDVESLGELMNINQGLL-KALGVSHPKLDQLVEIARK--AGALGAKLTGAGGGGCM 270

                  ...
gi 1345500311 342 VAL 344
Cdd:TIGR00549 271 IAL 273
PRK03926 PRK03926
mevalonate kinase; Provisional
26-357 5.98e-17

mevalonate kinase; Provisional


Pssm-ID: 179677 [Multi-domain]  Cd Length: 302  Bit Score: 80.48  E-value: 5.98e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311  26 APGRVNLIGEHTDYNDGFVLPCAIHYQTVVAAAKREDNIVrvVSVDYGNAVDEFditqaitfqqdkmwaNYIRGVVKcLL 105
Cdd:PRK03926    6 APGKIYLFGEHAVVYGKPAIACAIDLRTYVRAEFNDDSIY--IESDYGKTGEKH---------------PYVSAAIE-KM 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 106 ARGYQFTGADISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLEISQAEIALNGQQAENEFVGCNCGImDQMISAEGreN 185
Cdd:PRK03926   68 REEADKDGVTVSITSQIPVGSGLGSSAAVTVATIGALNRLLGLGLSLEEIAKLGHKVELLVQGAASPT-DTYVSTMG--G 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 186 HAMLLDCRSLEtesvsmPEEMAVVI----INSNKKRgLVdseyntrrqqceeaARifgVKALRdvtiEQFNEKVAE-LDE 260
Cdd:PRK03926  145 FVTIPDRKKLP------FPECGIVVgytgSSGSTKE-LV--------------AN---VRKLK----EEYPELIEPiLSS 196
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 261 M--VAKRARHVITENdrtveaaqalrahDMKRMGELMAESHAsMRDDFEITVKEIDTLVEIVKEvigdQG--GVRMTGGG 336
Cdd:PRK03926  197 IgkISEKGEELILSG-------------DYVSLGELMNINQG-LLDALGVSTKELSELIYAART----AGalGAKITGAG 258
                         330       340
                  ....*....|....*....|.
gi 1345500311 337 FGGCIVALVPPALVDDVKAAV 357
Cdd:PRK03926  259 GGGCMVALAAPEKQSEVATAI 279
GHMP_kinases_N pfam00288
GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and ...
115-183 1.01e-11

GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and mevalonate kinases.


Pssm-ID: 395225 [Multi-domain]  Cd Length: 64  Bit Score: 59.87  E-value: 1.01e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1345500311 115 DISVSGNVPQGAGLSSSAALEVVIGQTFKVLFNLeisqaEIALNGQQAENEFVGCNCGIMDQMISAEGR 183
Cdd:pfam00288   1 DIEIESNIPLGAGLGSSAALAVALLLALNELFGL-----PLAKLALEAEELAGGGRGGGMDVAASLYGG 64
GHMP_kinases_C pfam08544
GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and ...
279-361 1.16e-10

GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and mevalonate kinases.


Pssm-ID: 430063 [Multi-domain]  Cd Length: 85  Bit Score: 57.48  E-value: 1.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 279 AAQALRAHDMKRMGELMAESHASM--RDDFEITVKEIDTLVEIVKEVIGdqgGVRMTGGGFGGCIVALVP-PALVDDVKA 355
Cdd:pfam08544   1 LLEALLRGDLEELGKLLTESAESLepLLVVGILPPELDELLEALLELGL---GAKLSGSGGGPTVFALFKdEDDAEEVAR 77

                  ....*.
gi 1345500311 356 AVEAKY 361
Cdd:pfam08544  78 ALREAG 83
PTZ00298 PTZ00298
mevalonate kinase; Provisional
278-361 7.52e-04

mevalonate kinase; Provisional


Pssm-ID: 240351 [Multi-domain]  Cd Length: 328  Bit Score: 40.99  E-value: 7.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1345500311 278 EAAQALRAHDMKRMGELMAESHASMRddfEITV--KEIDTLVEIVKEVigDQGGVRMTGGGFGGCIVALVPP-----ALV 350
Cdd:PTZ00298  229 EAKEALQKGNLFRVGELMNANHDLCQ---KLTVscRELDSIVQTCRTY--GALGAKMSGTGRGGLVVALAASedqrdAIA 303
                          90
                  ....*....|..
gi 1345500311 351 DDVKAAV-EAKY 361
Cdd:PTZ00298  304 KAVRARCpEAKF 315
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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