NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1343937572|ref|XP_023807250|]
View 

ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Oryzias latipes]

Protein Classification

Rossmann-fold NAD(P)-binding domain-containing protein( domain architecture ID 229380)

Rossmann-fold NAD(P)-binding domain-containing protein may function as an oxidoreductase

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
NADB_Rossmann super family cl21454
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ...
 49-477 0e+00

Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction.


The actual alignment was detected with superfamily member TIGR01989:

Pssm-ID: 473865 [Multi-domain]  Cd Length: 437  Bit Score: 558.22  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMDPNLADKKILLLEAGNKK-----VMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPYKRMQVWDACSDALITFDKEDLENEMAYIVENDIVVVSITRQL-DTLSDNVQVKYRSKVVKYTWPMPHHAAESvPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKYPNDNS-NW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNVAWQRFLPTGPIAMLPLSDTHSS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWSTSHRLAEELLELDEESFVDAINSAF---WSSENHSELIETAGSLFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 360 FPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMA 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1343937572 440 AIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 558.22  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMDPNLADKKILLLEAGNKK-----VMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPYKRMQVWDACSDALITFDKEDLENEMAYIVENDIVVVSITRQL-DTLSDNVQVKYRSKVVKYTWPMPHHAAESvPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKYPNDNS-NW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNVAWQRFLPTGPIAMLPLSDTHSS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWSTSHRLAEELLELDEESFVDAINSAF---WSSENHSELIETAGSLFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 360 FPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMA 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1343937572 440 AIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 50-480 1.88e-79

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 253.15  E-value: 1.88e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSLgmdpNLADKKILLLEAG-NKKVMDKVPDTystRVSSISPGSATLLSGIGAWEHITEMRCKPY 128
Cdd:PRK08850    6 DVAIIGGGMVGLALAAAL----KESDLRIAVIEGQlPEEALNELPDV---RVSALSRSSEHILRNLGAWQGIEARRAAPY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALITFDKEDL-ENEMAYIVENDIVVVSITRQLDTLsDNVQVKyrskvvkytwpMPHHAA-----ESVPW 202
Cdd:PRK08850   79 IAMEVWEQDSFARIEFDAESMaQPDLGHIVENRVIQLALLEQVQKQ-DNVTLL-----------MPARCQsiavgESEAW 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VqvTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTH-S 281
Cdd:PRK08850  147 L--TLDNGQALTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDP-HNSVARQIFTPQGPLAFLPMSEPNmS 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 282 SLVWSTSHRLAEELLELDEESFVDAINSAFwssENHSELIETAGslfrgalsaimpsagsprqlppsvagigpkSRVMFP 361
Cdd:PRK08850  224 SIVWSTEPLRAEALLAMSDEQFNKALTAEF---DNRLGLCEVVG------------------------------ERQAFP 270

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAI 441
Cdd:PRK08850  271 LKMRYARDFVRERVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQQGRDIGLKRNLRGYERWRKAEAAKMIAAM 350

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFA 480
Cdd:PRK08850  351 QGFRDLFSGSNPAKKLVRGIGMSLAGQLPGAKDEIMKRA 389
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 49-473 1.16e-55

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 188.22  E-value: 1.16e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGmdpnLADKKILLLEAgnkkvmDKVPDTYStRVSSISPGSATLLSGIGAWEHITEmRCKPY 128
Cdd:COG0654     4 TDVLIVGGGPAGLALALALA----RAGIRVTVVER------APPPRPDG-RGIALSPRSLELLRRLGLWDRLLA-RGAPI 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALIT-FDKEDLENEMAYIVENDIVVVSITRQLDTLsdNVQVKYRSKVVKYtwpmpHHAAESVpwvQVTL 207
Cdd:COG0654    72 RGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARAL--GVELRFGTEVTGL-----EQDADGV---TVTL 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 208 ANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLseptennvawqrflptgpiamlplsdthsslvwst 287
Cdd:COG0654   142 ADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAGVRT----------------------------------- 186

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 288 shrlaeelleldeesfvdainsafwssenhselietagsLFRGALSAIMPSAGSPRQLPPsvagigpksRVMFPLGMGHA 367
Cdd:COG0654   187 ---------------------------------------ELRARLAAAGPRLGELLELSP---------RSAFPLRRRRA 218

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 368 SEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMAAIDLMKRL 447
Cdd:COG0654   219 ERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAADALGRL 295

                         410       420
                  ....*....|....*....|....*.
gi 1343937572 448 YSTDVAPAVLLRTFGLQATNMLPTLK 473
Cdd:COG0654   296 FHPDSPPLRLLRNAGLRLLDRLPPLK 321
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 7.73e-13

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 69.66  E-value: 7.73e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMAcslgmdpnladkkILLLEAGNKKVM-DKVPDTYST-RVSSISPGSATLLSGIGAWEHITEMrCK 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAE-GV 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 127 PYKRMQVWDACSDAlitfdKEDLENEMAYiveNDIVVVSITRQLDTLSDN-----VQVKYRSKVVKYTwpmphHAAESVP 201
Cdd:pfam01494  68 PHEGMGLAFYNTRR-----RADLDFLTSP---PRVTVYPQTELEPILVEHaeargAQVRFGTEVLSLE-----QDGDGVT 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 202 WVQVTLANGE--TLQTKLLIGADGPNSMVRQELGIP-----TVKWNYdQSAVVAALHLSEPTENN--VAWQRFLPTGPIA 272
Cdd:pfam01494 135 AVVRDRRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEfegfeGVPFGS-LDVLFDAPDLSDPVERAfvHYLIYAPHSRGFM 213

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 273 MLPLSDTHSSLVWstshrlaeelleldeesFVdainsAFWSSENHSELIETagslFRGALSAIMPSAGSPrqlPPSVAGI 352
Cdd:pfam01494 214 VGPWRSAGRERYY-----------------VQ-----VPWDEEVEERPEEF----TDEELKQRLRSIVGI---DLALVEI 264

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 353 GPKSRvmFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETERQ 431
Cdd:pfam01494 265 LWKSI--WGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAERL 338


                  ..
gi 1343937572 432 RH 433
Cdd:pfam01494 339 PV 340
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 558.22  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMDPNLADKKILLLEAGNKK-----VMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPYKRMQVWDACSDALITFDKEDLENEMAYIVENDIVVVSITRQL-DTLSDNVQVKYRSKVVKYTWPMPHHAAESvPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKYPNDNS-NW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNVAWQRFLPTGPIAMLPLSDTHSS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWSTSHRLAEELLELDEESFVDAINSAF---WSSENHSELIETAGSLFRGALSAIMPSAGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 360 FPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMA 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 1343937572 440 AIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 50-481 7.03e-147

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 425.08  E-value: 7.03e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSLGMDPnladKKILLLEAgnKKVMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEMRCKPYK 129
Cdd:TIGR01988   1 DIVIVGGGMVGLALALALARSG----LKVALIEA--TPLPAPADPGFDNRVSALSAASIRLLEKLGVWDKIEPARAQPIR 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 130 RMQVWDACSDALITFDKEDLENE-MAYIVENDIVVVSITRQLDtLSDNVQVKYRSKVVkytwPMPHHAaesvPWVQVTLA 208
Cdd:TIGR01988  75 DIHVSDGGSFGALRFDADEIGLEaLGYVVENRVLQQALWERLQ-ELPNVTLLCPARVV----ELPRHS----DHVELTLD 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 209 NGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTeNNVAWQRFLPTGPIAMLPLSDTHSSLVWSTS 288
Cdd:TIGR01988 146 DGQQLRARLLVGADGANSKVRQLAGIPTTGWDYGQSAVVANVKHERPH-QGTAWERFTPTGPLALLPLPDNRSSLVWTLP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 289 HRLAEELLELDEESFVDAINSAFWSsenhselietagslfrgalsaimpsagsprQLPPSVAgigPKSRVMFPLGMGHAS 368
Cdd:TIGR01988 225 PEEAERLLALSDEEFLAELQRAFGS------------------------------RLGAITL---VGERHAFPLSLTHAK 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 369 EYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAIDLMKRLY 448
Cdd:TIGR01988 272 RYVAPRLALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIGSLRVLQRYERRRRFDNAAMLGATDGLNRLF 351

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1343937572 449 STDVAPAVLLRTFGLQATNMLPTLKEQIMAFAS 481
Cdd:TIGR01988 352 SNDFPPLRLLRNLGLRLLNNLPPLKNFIARYAM 384
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 50-480 1.88e-79

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 253.15  E-value: 1.88e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSLgmdpNLADKKILLLEAG-NKKVMDKVPDTystRVSSISPGSATLLSGIGAWEHITEMRCKPY 128
Cdd:PRK08850    6 DVAIIGGGMVGLALAAAL----KESDLRIAVIEGQlPEEALNELPDV---RVSALSRSSEHILRNLGAWQGIEARRAAPY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALITFDKEDL-ENEMAYIVENDIVVVSITRQLDTLsDNVQVKyrskvvkytwpMPHHAA-----ESVPW 202
Cdd:PRK08850   79 IAMEVWEQDSFARIEFDAESMaQPDLGHIVENRVIQLALLEQVQKQ-DNVTLL-----------MPARCQsiavgESEAW 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VqvTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTH-S 281
Cdd:PRK08850  147 L--TLDNGQALTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDP-HNSVARQIFTPQGPLAFLPMSEPNmS 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 282 SLVWSTSHRLAEELLELDEESFVDAINSAFwssENHSELIETAGslfrgalsaimpsagsprqlppsvagigpkSRVMFP 361
Cdd:PRK08850  224 SIVWSTEPLRAEALLAMSDEQFNKALTAEF---DNRLGLCEVVG------------------------------ERQAFP 270

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAI 441
Cdd:PRK08850  271 LKMRYARDFVRERVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQQGRDIGLKRNLRGYERWRKAEAAKMIAAM 350

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFA 480
Cdd:PRK08850  351 QGFRDLFSGSNPAKKLVRGIGMSLAGQLPGAKDEIMKRA 389
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
49-481 1.39e-76

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 244.86  E-value: 1.39e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMdpnlADKKILLLEAGNKKVMDkvPDTYSTRVSSISPGSATLLSGIGAWEHITEMRCKPY 128
Cdd:PRK07608    6 FDVVVVGGGLVGASLALALAQ----SGLRVALLAPRAPPRPA--DDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVW-DAcsDALITFDK-EDLENEMAYIVENDIVVVSITRQLDTlSDNVQVKYRSKVVkytWPMPHHAAEsvpwvqVT 206
Cdd:PRK07608   80 YDMRVFgDA--HARLHFSAyQAGVPQLAWIVESSLIERALWAALRF-QPNLTWFPARAQG---LEVDPDAAT------LT 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 207 LANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTHSSLVWS 286
Cdd:PRK07608  148 LADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKAERP-HRGTAYQWFRDDGILALLPLPDGHVSMVWS 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 287 TSHrlaeelleldeesfVDAINSAFWSSENHSELIETAGSLFRGALSAIMPSAGsprqlppsvagigpksrvmFPLGMGH 366
Cdd:PRK07608  227 ART--------------AHADELLALSPEALAARVERASGGRLGRLECVTPAAG-------------------FPLRLQR 273

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 367 ASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfNGKDLGAIQHLLEYETERQRHNLPMMAAIDLMKR 446
Cdd:PRK07608  274 VDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE-PFRDLGDLRLLRRYERARREDILALQVATDGLQR 352

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 1343937572 447 LYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFAS 481
Cdd:PRK07608  353 LFALPGPLARWLRNAGMALVGALPLVKRWLVRHAL 387
PRK07364 PRK07364
FAD-dependent hydroxylase;
49-473 2.54e-75

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 242.62  E-value: 2.54e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLgMDPNLadkKILLLEAGNKKVMDKVPDTYStrvssISPGSATLLSGIGAWEHITEmRCKPY 128
Cdd:PRK07364   19 YDVAIVGGGIVGLTLAAAL-KDSGL---RIALIEAQPAEAAAAKGQAYA-----LSLLSARIFEGIGVWEKILP-QIGKF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALITFDKEDL-ENEMAYIVENDIVVVSITRQLDTLsDNVQVKYRSKVVKYTWPmPHHAAesvpwVQVTL 207
Cdd:PRK07364   89 RQIRLSDADYPGVVKFQPTDLgTEALGYVGEHQVLLEALQEFLQSC-PNITWLCPAEVVSVEYQ-QDAAT-----VTLEI 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 208 ANGE-TLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTHSSLVWS 286
Cdd:PRK07364  162 EGKQqTLQSKLVVAADGARSPIRQAAGIKTKGWKYWQSCVTATVKHEAP-HNDIAYERFWPSGPFAILPLPGNRCQIVWT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 287 TSHRLAEELLELDEESFVDainsafwssenhsELIETAGSLFrGALSAImpsagSPRQLppsvagigpksrvmFPLGMGH 366
Cdd:PRK07364  241 APHAQAKALLALPEAEFLA-------------ELQQRYGDQL-GKLELL-----GDRFL--------------FPVQLMQ 287

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 367 ASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAIDLMKR 446
Cdd:PRK07364  288 SDRYVQHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQTAHQRGEDIGSLAVLKRYERWRKRENWLILGFTDLLDR 367

                         410       420
                  ....*....|....*....|....*..
gi 1343937572 447 LYSTDVAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK07364  368 LFSNQWWPLVVVRRLGLWLLRHVPPLK 394
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 46-480 3.73e-75

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 241.43  E-value: 3.73e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  46 NEVYDVIISGGGMVGSTMACSLGMdpnlADKKILLLE--AGNKKVMDKVPDTystRVSSISPGSATLLSGIGAWEHITEM 123
Cdd:PRK08020    3 NQPTDIAIVGGGMVGAALALGLAQ----HGFSVAVLEhaAPAPFDADSQPDV---RISAISAASVALLKGLGVWDAVQAM 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPYKRMQVWDAcSDALITFDKEDLE-NEMAYIVENDIVVVSITRQLDTlSDNVQVKYRSKVVKYTWpmpHHAAesvpW 202
Cdd:PRK08020   76 RSHPYRRLETWEW-ETAHVVFDAAELKlPELGYMVENRVLQLALWQALEA-HPNVTLRCPASLQALQR---DDDG----W 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 vQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENnVAWQRFLPTGPIAMLPLSDTHSS 282
Cdd:PRK08020  147 -ELTLADGEEIQAKLVIGADGANSQVRQMAGIGVHGWQYRQSCMLISVKCENPPGD-STWQQFTPSGPRAFLPLFDNWAS 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWSTSHRLAEELLELDEESFVDAINSAFWSSenhselietagslfrgaLSAIMP-SAGSprqlppsvagigpksrvmFP 361
Cdd:PRK08020  225 LVWYDSPARIRQLQAMSMAQLQQEIAAHFPAR-----------------LGAVTPvAAGA------------------FP 269

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAI 441
Cdd:PRK08020  270 LTRRHALQYVQPGLALVGDAAHTINPLAGQGVNLGYRDVDALLDVLVNARSYGEAWASEAVLKRYQRRRMADNLLMQSGM 349

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFA 480
Cdd:PRK08020  350 DLFYAGFSNNLPPLRFARNLGLMAAQRAGVLKRQALKYA 388
UbiH TIGR01984
2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent ...
 50-476 1.08e-72

2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273911 [Multi-domain]  Cd Length: 382  Bit Score: 234.51  E-value: 1.08e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSLGmdpNLADKKILLLEAgnkKVMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEMRCkPYK 129
Cdd:TIGR01984   1 DVIIVGGGLVGLSLALALS---RLGKIKIALIEA---NSPSAAQPGFDARSLALSYGSKQILEKLGLWPKLAPFAT-PIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 130 RMQVWDACSDALITFDKEDL-ENEMAYIVENDIVVVSITRQLDTLSdNVQVKYRSKVVKYTwpmpHHAAEsvpwVQVTLA 208
Cdd:TIGR01984  74 DIHVSDQGHFGATHLRASEFgLPALGYVVELADLGQALLSRLALLT-NIQLYCPARYKEII----RNQDY----VRVTLD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 209 NGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENnVAWQRFLPTGPIAMLPLSD-THSSLVWST 287
Cdd:TIGR01984 145 NGQQLRAKLLIAADGANSKVRELLSIPTEEHDYNQTALIANIRHEQPHQG-CAFERFTPHGPLALLPLKDnYRSSLVWCL 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 288 SHRLAEELLELDEESFVDAINSAF-WSSenhselietagslfrGALSAImpsagsprqlppsvagiGPKSRvmFPLGMGH 366
Cdd:TIGR01984 224 PSKQADTIANLPDAEFLAELQQAFgWRL---------------GKITQV-----------------GERKT--YPLKLRI 269

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 367 ASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfngKDLGAIQHLLEYETERQRHNLPMMAAIDLMKR 446
Cdd:TIGR01984 270 AETHVHPRVVLIGNAAQTLHPIAGQGFNLGLRDVETLAEVLIDAR---IDLGTYALLQEYLRRRQFDQFITIGLTDGLNR 346

                         410       420       430
                  ....*....|....*....|....*....|
gi 1343937572 447 LYSTDVAPAVLLRTFGLQATNMLPTLKEQI 476
Cdd:TIGR01984 347 LFSNHIPLLRALRNLGLLALENFPPLKKRL 376
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 50-473 1.72e-71

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 232.41  E-value: 1.72e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSL---GMDpnladkkILLLEAGNKKVMDKVPDT-YSTRVSSISPGSATLLSGIGAWEHITEMRC 125
Cdd:PRK05714    4 DLLIVGAGMVGSALALALqgsGLE-------VLLLDGGPLSVKPFDPQApFEPRVSALSAASQRILERLGAWDGIAARRA 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 126 KPYKRMQVWDACSDALITFDKEDLENE-MAYIVENDIVVVSItrqLDTLSD-NVQVKYRSKVVKytwpMPHHAAEsvpWv 203
Cdd:PRK05714   77 SPYSEMQVWDGSGTGQIHFSAASVHAEvLGHIVENRVVQDAL---LERLHDsDIGLLANARLEQ----MRRSGDD---W- 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 204 QVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLS---DTH 280
Cdd:PRK05714  146 LLTLADGRQLRAPLVVAADGANSAVRRLAGCATREWDYLHHAIVTSVRCSEP-HRATAWQRFTDDGPLAFLPLErdgDEH 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 281 -SSLVWSTSHRLAEELLELDEESFVDAINSAFwssenhselietagslfRGALSAIMPSagsprqlppsvagigpKSRVM 359
Cdd:PRK05714  225 wCSIVWSTTPEEAERLMALDDDAFCAALERAF-----------------EGRLGEVLSA----------------DPRLC 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 360 FPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMA 439
Cdd:PRK05714  272 VPLRQRHAKRYVEPGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAERGERLADVRVLSRFERRRMPHNLALMA 351

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1343937572 440 AIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK05714  352 AMEGFERLFQADPLPLRWLRNTGLKLVDQMPEAK 385
PRK08013 PRK08013
oxidoreductase; Provisional
 49-477 2.75e-69

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 226.47  E-value: 2.75e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSL---GMdpnladkKILLLEagnKKVMDKVP--DTYSTRVSSISPGSATLLSGIGAWEHITEM 123
Cdd:PRK08013    4 VDVVIAGGGMVGLAVACGLqgsGL-------RVAVLE---QRVPEPLAadAPPALRVSAINAASEKLLTRLGVWQDILAR 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPYKRMQVWDACSDALITFDKEDLE-NEMAYIVENDIVVVSITRQLDTLSDnVQVkyrskvvkytwpMPHHAAESVPW 202
Cdd:PRK08013   74 RASCYHGMEVWDKDSFGRIAFDDQSMGySHLGHIIENSVIHYALWQKAQQSSD-ITL------------LAPAELQQVAW 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQ----VTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSD 278
Cdd:PRK08013  141 GEneafLTLKDGSMLTARLVVGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEP-HDAVARQVFHGDGILAFLPLSD 219

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 279 TH-SSLVWSTSHRLAEELLELDEESFVDAINSAFwssENHSELIETAgslfrgalsaimpsagSPRQLppsvagigpksr 357
Cdd:PRK08013  220 PHlCSIVWSLSPEEAQRMQQAPEEEFNRALAIAF---DNRLGLCELE----------------SERQV------------ 268

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 358 vmFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGaiQHLLEYETERQR-HNLP 436
Cdd:PRK08013  269 --FPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELRRLHRQGKDIG--QHLYLRRYERSRkHSAA 344

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|..
gi 1343937572 437 MM-AAIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:PRK08013  345 LMlAGMQGFRDLFAGNNPAKKLLRDIGLKLADTLPGVKPQLI 386
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
49-474 6.16e-67

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 220.24  E-value: 6.16e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMD-PNLadkKILLLEAGNKKVMDKVPdtystRVSSISPGSATLLSGIGAWEHItEMRCKP 127
Cdd:PRK07333    2 CDVVIAGGGYVGLALAVALKQAaPHL---PVTVVDAAPAGAWSRDP-----RASAIAAAARRMLEALGVWDEI-APEAQP 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 128 YKRMQVWDA-CSDA----LITFDKEDLENE-MAYIVENDIVVVSITRQLDTLsdNVQVKYRSKVVKYTwPMPHHAAesvp 201
Cdd:PRK07333   73 ITDMVITDSrTSDPvrpvFLTFEGEVEPGEpFAHMVENRVLINALRKRAEAL--GIDLREATSVTDFE-TRDEGVT---- 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 202 wvqVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAAL-HlsEPTENNVAWQRFLPTGPIAMLPLSDTH 280
Cdd:PRK07333  146 ---VTLSDGSVLEARLLVAADGARSKLRELAGIKTVGWDYGQSGIVCTVeH--ERPHGGRAEEHFLPAGPFAILPLKGNR 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 281 SSLVWSTSHRLAEELLELDEESFvdainsafwssenHSELiETAGSLFRGALSAImpsaGSPRQlppsvagigpksrvmF 360
Cdd:PRK07333  221 SSLVWTERTADAERLVALDDLVF-------------EAEL-EQRFGHRLGELKVL----GKRRA---------------F 267

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 361 PLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAA 440
Cdd:PRK07333  268 PLGLTLARSFVAPRFALVGDAAHGIHPIAGQGLNLGLKDVAALAEVVVEAARLGLDIGSLDVLERYQRWRRFDTVRMGVT 347

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1343937572 441 IDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKE 474
Cdd:PRK07333  348 TDVLNRLFSNDSTLLRSVRDIGLGLVDRLPKLKS 381
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 49-480 5.14e-66

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 217.33  E-value: 5.14e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGMDpnlaDKKILLLEAGNKKVMDKVPDTySTRVSSISPGSATLLSGIGAWEHITEMRCKPY 128
Cdd:PRK08849    4 YDIAVVGGGMVGAATALGFAKQ----GRSVAVIEGGEPKAFEPSQPM-DIRVSAISQTSVDLLESLGAWSSIVAMRVCPY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWD--AC-----SDALitfdkeDLEnEMAYIVENDIVVVSITRQLDtLSDNVQVKYRSKVVKYTWPMPHHaaesvp 201
Cdd:PRK08849   79 KRLETWEhpECrtrfhSDEL------NLD-QLGYIVENRLIQLGLWQQFA-QYPNLTLMCPEKLADLEFSAEGN------ 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 202 wvQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTHS 281
Cdd:PRK08849  145 --RVTLESGAEIEAKWVIGADGANSQVRQLAGIGITAWDYRQHCMLINVETEQP-QQDITWQQFTPSGPRSFLPLCGNQG 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 282 SLVWSTSHRLAEELleldeesfvdainSAFWSSENHSELIetagslfrgalsaimpsagspRQLPPSVAGIGPKSRVMFP 361
Cdd:PRK08849  222 SLVWYDSPKRIKQL-------------SAMNPEQLRSEIL---------------------RHFPAELGEIKVLQHGSFP 267

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACltqLLSQAAFNGKDLGAIqhLLEYETERQRHNLPMMAAI 441
Cdd:PRK08849  268 LTRRHAQQYVKNNCVLLGDAAHTINPLAGQGVNLGFKDVDV---LLAETEKQGVLNDAS--FARYERRRRPDNLLMQTGM 342

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFA 480
Cdd:PRK08849  343 DLFYKTFSNSLTPLKFVRNAALKLAENSGPLKTQVLKYA 381
PRK08773 PRK08773
UbiH/UbiF family hydroxylase;
50-472 4.20e-63

UbiH/UbiF family hydroxylase;


Pssm-ID: 181552 [Multi-domain]  Cd Length: 392  Bit Score: 210.10  E-value: 4.20e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGStmACSLGmdpnLADKKILLLEAGNKKVMDKVPDTYSTRVSSISPGSATLLSGIGAWEHITEMRCKPYK 129
Cdd:PRK08773    8 DAVIVGGGVVGA--ACALA----LADAGLSVALVEGREPPRWQADQPDLRVYAFAADNAALLDRLGVWPAVRAARAQPYR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 130 RMQVWDACSDALITFDKEDL-ENEMAYIVENDIVVVSITRQLDtlSDNVQVKYRSKVVKYTwpmphhaaESVPWVQVTLA 208
Cdd:PRK08773   82 RMRVWDAGGGGELGFDADTLgREQLGWIVENDLLVDRLWAALH--AAGVQLHCPARVVALE--------QDADRVRLRLD 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 209 NGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNvAWQRFLPTGPIAMLPLSDTHSSLVWSTS 288
Cdd:PRK08773  152 DGRRLEAALAIAADGAASTLRELAGLPVSRHDYAQRGVVAFVDTEHPHQAT-AWQRFLPTGPLALLPFADGRSSIVWTLP 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 289 HRLAEELLELDEESFVDAINSAFwssenhselietAGSLfrGALSAIMPsagsprqlppsvagigpksRVMFPLGMGHAS 368
Cdd:PRK08773  231 DAEAERVLALDEAAFSRELTQAF------------AARL--GEVRVASP-------------------RTAFPLRRQLVQ 277

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 369 EYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAIDLMKRLY 448
Cdd:PRK08773  278 QYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALQQLVRQAHARRADWAAPHRLQRWARTRRSDNTVAAYGFDAINRVF 357

                         410       420
                  ....*....|....*....|....
gi 1343937572 449 STDVAPAVLLRTFGLQATNMLPTL 472
Cdd:PRK08773  358 SNDEMHLTLLRGSVLGLAGKLPPL 381
PRK05732 PRK05732
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 49-473 4.49e-58

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 235584 [Multi-domain]  Cd Length: 395  Bit Score: 196.61  E-value: 4.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSL--GMDPNLadkKILLLEAgnKKVMDKVPDTYSTRVSSISPGSATLLSGIGAWEHItEMRCK 126
Cdd:PRK05732    4 MDVIIVGGGMAGATLALALsrLSHGGL---PVALIEA--FAPESDAHPGFDARAIALAAGTCQQLARLGVWQAL-ADCAT 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 127 PYKRMQVWDACSDALITFDKEDLENE-MAYIVENDIVVVSITRQLDTlSDNVQVKYRSKVVKYTwpmphHAAESVpwvQV 205
Cdd:PRK05732   78 PITHIHVSDRGHAGFVRLDAEDYGVPaLGYVVELHDVGQRLFALLDK-APGVTLHCPARVANVE-----RTQGSV---RV 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 206 TLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTHSSLVW 285
Cdd:PRK05732  149 TLDDGETLTGRLLVAADGSHSALREALGIDWQQHPYEQVAVIANVTTSEA-HQGRAFERFTEHGPLALLPMSDGRCSLVW 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 286 stSHRLAEElleldeesfvDAINSafWSSENH-SELIETAGslFR-GALSAimpsagsprqlppsvagIGPksRVMFPLG 363
Cdd:PRK05732  228 --CHPLEDA----------EEVLS--WSDAQFlAELQQAFG--WRlGRITH-----------------AGK--RSAYPLA 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 364 MGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQ--RHNLPMMAai 441
Cdd:PRK05732  273 LVTAAQQISHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAETLTQALARGEDIGDYAVLQRYQQRRQqdREATIGFT-- 350

                         410       420       430
                  ....*....|....*....|....*....|..
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLK 473
Cdd:PRK05732  351 DGLVRLFANRWAPLVVGRNLGLMAMDLLPPAR 382
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 49-473 1.16e-55

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 188.22  E-value: 1.16e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGmdpnLADKKILLLEAgnkkvmDKVPDTYStRVSSISPGSATLLSGIGAWEHITEmRCKPY 128
Cdd:COG0654     4 TDVLIVGGGPAGLALALALA----RAGIRVTVVER------APPPRPDG-RGIALSPRSLELLRRLGLWDRLLA-RGAPI 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALIT-FDKEDLENEMAYIVENDIVVVSITRQLDTLsdNVQVKYRSKVVKYtwpmpHHAAESVpwvQVTL 207
Cdd:COG0654    72 RGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARAL--GVELRFGTEVTGL-----EQDADGV---TVTL 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 208 ANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLseptennvawqrflptgpiamlplsdthsslvwst 287
Cdd:COG0654   142 ADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAGVRT----------------------------------- 186

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 288 shrlaeelleldeesfvdainsafwssenhselietagsLFRGALSAIMPSAGSPRQLPPsvagigpksRVMFPLGMGHA 367
Cdd:COG0654   187 ---------------------------------------ELRARLAAAGPRLGELLELSP---------RSAFPLRRRRA 218

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 368 SEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMAAIDLMKRL 447
Cdd:COG0654   219 ERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAADALGRL 295

                         410       420
                  ....*....|....*....|....*.
gi 1343937572 448 YSTDVAPAVLLRTFGLQATNMLPTLK 473
Cdd:COG0654   296 FHPDSPPLRLLRNAGLRLLDRLPPLK 321
PRK09126 PRK09126
FAD-dependent hydroxylase;
49-476 1.89e-43

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 157.80  E-value: 1.89e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMACSLGmDPNLadkKILLLEAGNKKVMDKVPdtYSTRVSSISPGSATLLSGIGAWEHITEMRCKPY 128
Cdd:PRK09126    4 SDIVVVGAGPAGLSFARSLA-GSGL---KVTLIERQPLAALADPA--FDGREIALTHASREILQRLGAWDRIPEDEISPL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALITFD-KEDLENEMAYIVENDIvvvsITRQLDT---LSDNVQVKYRSKVvkytwpmpHHAAESVPWVQ 204
Cdd:PRK09126   78 RDAKVLNGRSPFALTFDaRGRGADALGYLVPNHL----IRRAAYEavsQQDGIELLTGTRV--------TAVRTDDDGAQ 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 205 VTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPtENNVAWQRFLPTGPIAMLPLSDTHSSLV 284
Cdd:PRK09126  146 VTLANGRRLTARLLVAADSRFSATRRQLGIGADMHDFGRTMLVCRMRHELP-HHHTAWEWFGYGQTLALLPLNGHLSSLV 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 285 WSTShrlaeelleldeesfVDAINSAFWSSEnhSELIETAGSLFRGALSAIMPSAgsprqlppsvagigpkSRVMFPLGM 364
Cdd:PRK09126  225 LTLP---------------PDQIEALLALDP--EAFAAEVTARFKGRLGAMRLVS----------------SRHAYPLVA 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 365 GHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMAAIDLM 444
Cdd:PRK09126  272 VYAHRFVAKRFALIGDAAVGMHPVTAHGFNLGLKGQDILARLILAAARRGQDIGAASLLERYERKHRLATRPLYHATNAI 351

                         410       420       430
                  ....*....|....*....|....*....|..
gi 1343937572 445 KRLYSTDVAPAVLLRTFGLQATNMLPTLKEQI 476
Cdd:PRK09126  352 AALYTDDRPPARLLRRAVLRAANRFPPLKQAI 383
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
45-477 9.39e-36

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 136.57  E-value: 9.39e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  45 KNEVYDVIISGGGMVGSTMACSLGmdpnladkkilllEAGNKKVM-DKVPDTYSTRVSSISPGSATLLSGIGAWEhitem 123
Cdd:PRK07494    4 EKEHTDIAVIGGGPAGLAAAIALA-------------RAGASVALvAPEPPYADLRTTALLGPSIRFLERLGLWA----- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 124 RCKPY----KRMQVWDAcSDALI-----TFDKEDL-ENEMAYIVENDIVVVSITRQLDTLSdNVQVkyrskvvkytwpmP 193
Cdd:PRK07494   66 RLAPHaaplQSMRIVDA-TGRLIrapevRFRAAEIgEDAFGYNIPNWLLNRALEARVAELP-NITR-------------F 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 194 HHAAESV----PWVQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTEnNVAWQRFLPTG 269
Cdd:PRK07494  131 GDEAESVrpreDEVTVTLADGTTLSARLVVGADGRNSPVREAAGIGVRTWSYPQKALVLNFTHSRPHQ-NVSTEFHTEGG 209

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 270 PIAMLPLSDTHSSLVWSTSHRlaeelleldeesfvDAINSAFWSSENHSELIET-AGSLFrGALsaimpSAGSPRQLpps 348
Cdd:PRK07494  210 PFTQVPLPGRRSSLVWVVRPA--------------EAERLLALSDAALSAAIEErMQSML-GKL-----TLEPGRQA--- 266

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 349 vagigpksrvmFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafNGKDLGAIQHLLEYET 428
Cdd:PRK07494  267 -----------WPLSGQVAHRFAAGRTALVGEAAHVFPPIGAQGLNLGLRDVATLVEIVED---RPEDPGSAAVLAAYDR 332

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1343937572 429 ERQRHNLPMMAAIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIM 477
Cdd:PRK07494  333 ARRPDILSRTASVDLLNRSLLSDFLPVQDLRAAGLHLLYSFGPLRRLFM 381
PRK06996 PRK06996
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
48-476 6.06e-32

UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;


Pssm-ID: 235905 [Multi-domain]  Cd Length: 398  Bit Score: 126.34  E-value: 6.06e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  48 VYDVIISGGGMVGSTMACSLGMDPNLADKKILLLEAGNKKVMDKVPdtystRVSSISPGSATLLSGIGAW-------EHI 120
Cdd:PRK06996   11 DFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREPAASANDP-----RAIALSHGSRVLLETLGAWpadatpiEHI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 121 TEMRCKPYKRmqvwdacsdALITFDKEDLEnEMAYIVENDIVVVSITRQLDTLSDNVQVKYRSKVvkytwpmPHHAAESV 200
Cdd:PRK06996   86 HVSQRGHFGR---------TLIDRDDHDVP-ALGYVVRYGSLVAALARAVRGTPVRWLTSTTAHA-------PAQDADGV 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 201 PWVQVTLANGETLQTKLLIGADGP-NSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENnVAWQRFLPTGPIAMLPLSDT 279
Cdd:PRK06996  149 TLALGTPQGARTLRARIAVQAEGGlFHDQKADAGDSARRRDYGQTAIVGTVTVSAPRPG-WAWERFTHEGPLALLPLGGP 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 280 HS---SLVWSTSHRLAEELLELDEESFVDAINSAFwssenhselietaGSLFrGALSAIMPsagsprqlppsvagigpks 356
Cdd:PRK06996  228 RQadyALVWCCAPDEAARRAALPDDAFLAELGAAF-------------GTRM-GRFTRIAG------------------- 274

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 357 RVMFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQhlleyeterQRHNLP 436
Cdd:PRK06996  275 RHAFPLGLNAARTLVNGRIAAVGNAAQTLHPVAGQGLNLGLRDAHTLADALSDHGATPLALATFA---------ARRALD 345

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1343937572 437 ---MMAAIDLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQI 476
Cdd:PRK06996  346 rrvTIGATDLLPRLFTVDSRPLAHLRGAALTALEFVPPLKHAL 388
PRK06617 PRK06617
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 50-480 4.52e-29

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 168629 [Multi-domain]  Cd Length: 374  Bit Score: 117.72  E-value: 4.52e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  50 DVIISGGGMVGSTMACSLgmdpnlADKKILLLEAGNKKVmdKVPDTYS-TRVSSISPGSATLLSGIGAWEHITEMRCKpY 128
Cdd:PRK06617    3 NTVILGCGLSGMLTALSF------AQKGIKTTIFESKSV--KSPEFFKdIRTTALTPHSKNFLFSIDIWEELEKFVAE-M 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 129 KRMQVWDACSDALITFdKEDLENEMAYIVEND----IVVVSITRQ-LDTLSDNVQvkyrskvvkYTWPMPHHAAESVPWv 203
Cdd:PRK06617   74 QDIYVVDNKASEILDL-RNDADAVLGYVVKNSdfkkILLSKITNNpLITLIDNNQ---------YQEVISHNDYSIIKF- 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 204 qvtlaNGETLQTKLLIGADGPNSMVRQELGIPTVKWNYdQSAVVAALHLSEPTENnVAWQRFLPTGPIAMLPLSDTH-SS 282
Cdd:PRK06617  143 -----DDKQIKCNLLIICDGANSKVRSHYFANEIEKPY-QTALTFNIKHEKPHEN-CAMEHFLPLGPFALLPLKDQYaSS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWSTSHRLAEELLELDeesfVDAINsaFWSSENhselietagslfrgalsaimpsAGSprqlppSVAGIGPKSRVM-FP 361
Cdd:PRK06617  216 VIWSTSSDQAALIVNLP----VEEVR--FLTQRN----------------------AGN------SLGKITIDSEISsFP 261

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafNGKdlgaiqhLLEYETERQRHNLPMMAAI 441
Cdd:PRK06617  262 LKARIANRYFHNRIVLIADTAHTVHPLAGQGLNQGIKDIEILSMIVSN---NGT-------LQEYQKLRQEDNFIMYKLT 331

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1343937572 442 DLMKRLYSTDVAPAVLLRTFGLQATNMLPTLKEQIMAFA 480
Cdd:PRK06617  332 DELNNIFSNYSKNLRCLRQIGFKVINNFKPIKNLITSYA 370
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 7.73e-13

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 69.66  E-value: 7.73e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  49 YDVIISGGGMVGSTMAcslgmdpnladkkILLLEAGNKKVM-DKVPDTYST-RVSSISPGSATLLSGIGAWEHITEMrCK 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAE-GV 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 127 PYKRMQVWDACSDAlitfdKEDLENEMAYiveNDIVVVSITRQLDTLSDN-----VQVKYRSKVVKYTwpmphHAAESVP 201
Cdd:pfam01494  68 PHEGMGLAFYNTRR-----RADLDFLTSP---PRVTVYPQTELEPILVEHaeargAQVRFGTEVLSLE-----QDGDGVT 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 202 WVQVTLANGE--TLQTKLLIGADGPNSMVRQELGIP-----TVKWNYdQSAVVAALHLSEPTENN--VAWQRFLPTGPIA 272
Cdd:pfam01494 135 AVVRDRRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEfegfeGVPFGS-LDVLFDAPDLSDPVERAfvHYLIYAPHSRGFM 213

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 273 MLPLSDTHSSLVWstshrlaeelleldeesFVdainsAFWSSENHSELIETagslFRGALSAIMPSAGSPrqlPPSVAGI 352
Cdd:pfam01494 214 VGPWRSAGRERYY-----------------VQ-----VPWDEEVEERPEEF----TDEELKQRLRSIVGI---DLALVEI 264

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 353 GPKSRvmFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETERQ 431
Cdd:pfam01494 265 LWKSI--WGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAERL 338


                  ..
gi 1343937572 432 RH 433
Cdd:pfam01494 339 PV 340
PRK07045 PRK07045
putative monooxygenase; Reviewed
 204-410 8.23e-12

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 66.85  E-value: 8.23e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 204 QVTLANGETLQTKLLIGADGPNSMVRQE-LGIPTVKWNYDQSAVVAALHLSEPTENNVAWQRFLPTGPIAMLPLSDTHSS 282
Cdd:PRK07045  143 SVTLSDGERVAPTVLVGADGARSMIRDDvLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATR 222

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 283 LVWStshrlaeelleldeesfvdainsaFWSSENHSELIETAGSLFRGALSAIMPSAGSPrqlppSVAGIGPKSRV-MFP 361
Cdd:PRK07045  223 LVVS------------------------FPADEMQGYLADTTRTKLLARLNEFVGDESAD-----AMAAIGAGTAFpLIP 273

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1343937572 362 LGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQA 410
Cdd:PRK07045  274 LGRMNLDRYHKRNVVLLGDAAHSIHPITGQGMNLAIEDAGELGACLDLH 322
PRK06126 PRK06126
hypothetical protein; Provisional
 174-431 9.79e-10

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 60.78  E-value: 9.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 174 SDNVQVKYRSKVVKYTwpmphHAAESVPWVQVTLANGETL--QTKLLIGADGPNSMVRQELGIP---TVKWNYDQSAVVA 248
Cdd:PRK06126  139 QPGVTLRYGHRLTDFE-----QDADGVTATVEDLDGGESLtiRADYLVGCDGARSAVRRSLGISyegTSGLQRDLSIYIR 213

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 249 ALHLSEPTENNVAWQRFLpTGPiamlplsDTHSSLVwstshrlaeelleldeesfvdAINSA--FW-----SSENHSELI 321
Cdd:PRK06126  214 APGLAALVGHDPAWMYWL-FNP-------DRRGVLV---------------------AIDGRdeWLfhqlrGGEDEFTID 264

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 322 ET-AGSLFRGALsaimpsaGSPrqLPPSVAGIGPKSRVMFPlgmghASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDV 400
Cdd:PRK06126  265 DVdARAFVRRGV-------GED--IDYEVLSVVPWTGRRLV-----ADSYRRGRVFLAGDAAHLFTPTGGYGMNTGIGDA 330

                         250       260       270
                  ....*....|....*....|....*....|.
gi 1343937572 401 ACLTQLLsQAAFNGkdLGAIQHLLEYETERQ 431
Cdd:PRK06126  331 VNLAWKL-AAVLNG--WAGPALLDSYEAERR 358
PRK08244 PRK08244
monooxygenase;
211-479 6.67e-07

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 51.67  E-value: 6.67e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 211 ETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNVAwQRFLPTGPIAMLPLSDTHSSLVWSTSHR 290
Cdd:PRK08244  144 RTLTSSYVVGADGAGSIVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSVL-SLCTREGGVMIVPLSGGIYRVLIIDPER 222

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 291 LAEELLELDEESfvdainsafwssENHSELIETAGSLFRGALSAIMPSAG-SPRQlppsvagigpksrvmfplgmghASE 369
Cdd:PRK08244  223 PQVPKDEPVTLE------------ELKTSLIRICGTDFGLNDPVWMSRFGnATRQ----------------------AER 268

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 370 YVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETERQRHNLPMMAAIDLMKRLY 448
Cdd:PRK08244  269 YRSGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLA-AAIKGW---APDWLLDsYHAERHPVGTALLRNTEVQTKLF 344

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1343937572 449 stDVAPAVL-LRT-----FGLQATNMLptLKEQIMAF 479
Cdd:PRK08244  345 --DFTRPGLaLRSmlsdlLGFPEVNRY--LAGQISAL 377
PRK06753 PRK06753
hypothetical protein; Provisional
 203-433 1.32e-06

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 50.46  E-value: 1.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGiPTVKWNYDQ----SAVVAALHLSEPtenNVAWQRFLPTGPIAMLPLSD 278
Cdd:PRK06753  129 VTIHFADGESEAFDLCIGADGIHSKVRQSVN-ADSKVRYQGytcfRGLIDDIDLKLP---DCAKEYWGTKGRFGIVPLLN 204

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 279 thsslvwstshrlaeelleldeesfvdaiNSAFW-SSENHSELIETAGSLFRGALSAIMPSAGSP-RQLPPSVAGIGPKS 356
Cdd:PRK06753  205 -----------------------------NQAYWfITINAKERDPKYSSFGKPHLQAYFNHYPNEvREILDKQSETGILH 255

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 357 RVMF---PLgmghaSEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNgkdlgaiQHLLEYETERQRH 433
Cdd:PRK06753  256 HDIYdlkPL-----KSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCLNAYDFE-------KALQRYDKIRVKH 323
PRK06847 PRK06847
hypothetical protein; Provisional
 203-411 3.01e-06

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 49.10  E-value: 3.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNY-DQSAVVAALHLSEPTENNVAWQRflPTGPIAMLPLSDTHS 281
Cdd:PRK06847  140 VTVTFSDGTTGRYDLVVGADGLYSKVRSLVFPDEPEPEYtGQGVWRAVLPRPAEVDRSLMYLG--PTTKAGVVPLSEDLM 217

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 282 SLvWSTSHRLAEelleldeeSFVDainsafwssenHSELIETagslfrgaLSAIMPSAGSPrQLPPSVAGIGPKSRVMF- 360
Cdd:PRK06847  218 YL-FVTEPRPDN--------PRIE-----------PDTLAAL--------LRELLAPFGGP-VLQELREQITDDAQVVYr 268

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1343937572 361 PLG--MGHASEYvRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAA 411
Cdd:PRK06847  269 PLEtlLVPAPWH-RGRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELARHD 320
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
367-447 5.07e-06

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 48.75  E-value: 5.07e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 367 ASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETERQRHnlpMMAAIDLMK 445
Cdd:PRK06183  280 ADRWRSGRVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLA-AVLRGR---AGDALLDtYEQERRPH---ARAMIDLAV 352


                  ..
gi 1343937572 446 RL 447
Cdd:PRK06183  353 RL 354
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 46-409 7.99e-06

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 48.31  E-value: 7.99e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572  46 NEVYDVIISGGGMVGSTMACSLGMdpnlADKKILLLEagnkKVMDKVPDtystRVSS--ISPGSATLLSGIGAwEHITE- 122
Cdd:PTZ00367   31 NYDYDVIIVGGSIAGPVLAKALSK----QGRKVLMLE----RDLFSKPD----RIVGelLQPGGVNALKELGM-EECAEg 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 123 --MRCK--------------PYK-----------------RMQVWDACSDAlitfdkedlenemAYIVENdiVVVSItrq 169
Cdd:PTZ00367   98 igMPCFgyvvfdhkgkqvklPYGagasgvsfhfgdfvqnlRSHVFHNCQDN-------------VTMLEG--TVNSL--- 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 170 ldtLSDNVQVKYRSKVVKYT----WPMPHHAAESVPWVQVTLAngETLQ----TKLLIGADGPNSMVRQELGIPTVKWNY 241
Cdd:PTZ00367  160 ---LEEGPGFSERAYGVEYTeaekYDVPENPFREDPPSANPSA--TTVRkvatAPLVVMCDGGMSKFKSRYQHYTPASEN 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 242 dQSA----VVAALHLSEPTENNVAwqrFLPTGPIAMLPLSDTHSSLVwstshrlaeelleldeesfVDAINSAFWSSENH 317
Cdd:PTZ00367  235 -HSHfvglVLKNVRLPKEQHGTVF---LGKTGPILSYRLDDNELRVL-------------------VDYNKPTLPSLEEQ 291

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 318 SE-LIE-TAGSL---FRGALSAIMPSAGSPRQLPpsVAGIGPKsrvmFPLGMGhaseyvrhrVVLIGDAAHRVHPLAGQG 392
Cdd:PTZ00367  292 SEwLIEdVAPHLpenMRESFIRASKDTKRIRSMP--NARYPPA----FPSIKG---------YVGIGDHANQRHPLTGGG 356

                         410
                  ....*....|....*..
gi 1343937572 393 ANLGFGDVACLTQLLSQ 409
Cdd:PTZ00367  357 MTCCFSDCIRLAKSLTG 373
PRK06834 PRK06834
hypothetical protein; Provisional
 203-409 9.30e-06

hypothetical protein; Provisional


Pssm-ID: 235870 [Multi-domain]  Cd Length: 488  Bit Score: 48.09  E-value: 9.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNV--------AWQRFLPTGPIAML 274
Cdd:PRK06834  133 VDVELSDGRTLRAQYLVGCDGGRSLVRKAAGIDFPGWDPTTSYLIAEVEMTEEPEWGVhrdalgihAFGRLEDEGPVRVM 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 275 pLSDTHsslvwstshrlaeelleldeesfVDAINSAfwssenhselieTAGSLfRGALSAIMPS---AGSPRQLppsvag 351
Cdd:PRK06834  213 -VTEKQ-----------------------VGATGEP------------TLDDL-REALIAVYGTdygIHSPTWI------ 249

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1343937572 352 igpkSRvmFPLGMGHASEYVRHRVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQ 409
Cdd:PRK06834  250 ----SR--FTDMARQAASYRDGRVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQ 301
PRK06184 PRK06184
hypothetical protein; Provisional
 197-440 3.66e-05

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 46.13  E-value: 3.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 197 AESVPWVQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQS-AVVAALHLS--EPTennvAWQRFLP--TGPI 271
Cdd:PRK06184  139 ADGVTARVAGPAGEETVRARYLVGADGGRSFVRKALGIGFPGETLGIDrMLVADVSLTglDRD----AWHQWPDgdMGMI 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 272 AMLPLSDTHSSLVwstshrlaeelleldeESFVDAINSAFWSSENHSELIETAgslfrgalsaimpSAGSPRQL--PPSV 349
Cdd:PRK06184  215 ALCPLPGTDLFQI----------------QAPLPPGGEPDLSADGLTALLAER-------------TGRTDIRLhsVTWA 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 350 AGIGPKSRVmfplgmghASEYVRHRVVLIGDAAHrVHPLAG-QGANLGFgdvacltqllsQAAFN-GKDLGAI-----QH 422
Cdd:PRK06184  266 SAFRMNARL--------ADRYRVGRVFLAGDAAH-VHPPAGgQGLNTSV-----------QDAYNlGWKLAAVlagapEA 325

                         250
                  ....*....|....*....
gi 1343937572 423 LLE-YETERqrhnLPMMAA 440
Cdd:PRK06184  326 LLDtYEEER----RPVAAA 340
PRK07190 PRK07190
FAD-binding protein;
206-235 5.10e-05

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 45.58  E-value: 5.10e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 1343937572 206 TLANGETLQTKLLIGADGPNSMVRQELGIP 235
Cdd:PRK07190  145 TLSNGERIQSRYVIGADGSRSFVRNHFNVP 174
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
203-283 6.39e-05

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 44.57  E-value: 6.39e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343937572 203 VQVTLANGETLQTKLLIGADGPNSMVRQELGIPTVKWNYDQSAVVAALHLSEPTENNVAWQRFLPT-GPIAML------P 275
Cdd:COG0644   119 VVVRTGDGEEIRADYVVDADGARSLLARKLGLKRRSDEPQDYALAIKEHWELPPLEGVDPGAVEFFfGEGAPGgygwvfP 198


                  ....*...
gi 1343937572 276 LSDTHSSL 283
Cdd:COG0644   199 LGDGRVSV 206
PRK02106 PRK02106
choline dehydrogenase; Validated
 45-84 3.95e-04

choline dehydrogenase; Validated


Pssm-ID: 235000 [Multi-domain]  Cd Length: 560  Bit Score: 42.90  E-value: 3.95e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1343937572  45 KNEVYDVIISGGGMVGSTMACSLGMDPnlaDKKILLLEAG 84
Cdd:PRK02106    2 TTMEYDYIIIGAGSAGCVLANRLSEDP---DVSVLLLEAG 38
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 46-84 7.17e-04

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 42.12  E-value: 7.17e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1343937572  46 NEVYDVIISGGGMVGSTMACSLGMDPnlaDKKILLLEAG 84
Cdd:COG2303     2 LEEYDYVIVGAGSAGCVLANRLSEDA---GLRVLLLEAG 37
PRK06475 PRK06475
FAD-binding protein;
374-441 1.24e-03

FAD-binding protein;


Pssm-ID: 180582 [Multi-domain]  Cd Length: 400  Bit Score: 40.96  E-value: 1.24e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1343937572 374 RVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafngKDLGAiqHLLEYETERQrhnlPMMAAI 441
Cdd:PRK06475  293 RTIFLGDASHAVTPFAAQGAAMAIEDAAALAEALDS-----DDQSA--GLKRFDSVRK----ERIAAV 349
PRK07538 PRK07538
hypothetical protein; Provisional
 374-447 3.09e-03

hypothetical protein; Provisional


Pssm-ID: 236046 [Multi-domain]  Cd Length: 413  Bit Score: 39.88  E-value: 3.09e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1343937572 374 RVVLIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfngkDLGAIqhLLEYETERqrhnLPMMAAIDLMKRL 447
Cdd:PRK07538  298 RVTLLGDAAHPMYPVGSNGASQAILDARALADALAAHG----DPEAA--LAAYEAER----RPATAQIVLANRL 361
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH