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Conserved domains on  [gi|134303117|ref|YP_001122868|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Macrochelys temminckii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.32e-60

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 181.27  E-value: 1.32e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  81 QLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.32e-60

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 181.27  E-value: 1.32e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  81 QLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 2.28e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 106.35  E-value: 2.28e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   19 MLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQL-LSPTHTLLWAFIILF 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 134303117   98 LMTLGLIYEWIQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-114 4.37e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 96.34  E-value: 4.37e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLS-PTHT 88
Cdd:COG0838   14 VALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFG 91

                         90       100
                 ....*....|....*....|....*.
gi 134303117  89 LLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:COG0838   92 LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.32e-60

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 181.27  E-value: 1.32e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  81 QLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 1.38e-58

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 175.84  E-value: 1.38e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   2 NVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 134303117  82 LLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 4-116 3.17e-54

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 164.78  E-value: 3.17e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   4 TISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLL 83
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 134303117  84 SPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 8.80e-43

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 136.26  E-value: 8.80e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  81 QLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 1.13e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 133.14  E-value: 1.13e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTIsTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00106   1 MNLML-TLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  81 QLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 3.57e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 124.24  E-value: 3.57e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAV 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 134303117  81 QLLSPthTLLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 2.28e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 106.35  E-value: 2.28e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   19 MLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQL-LSPTHTLLWAFIILF 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 134303117   98 LMTLGLIYEWIQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.91e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 99.55  E-value: 1.91e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLnYWLTLMK--PDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPW 78
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLL-GLVLSKRsySDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQ 79

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 134303117  79 AVQLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWAE 116
Cdd:MTH00148  80 SLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-114 9.19e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 97.93  E-value: 9.19e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   5 ISTMTIALALSMILMLLNYWLTL-MKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLL 83
Cdd:MTH00161   3 LIILLIILLISIILMILASLLSKkSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTS 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 134303117  84 SPTHTLLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00161  83 NMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 10-114 3.32e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 96.70  E-value: 3.32e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLSPTHTL 89
Cdd:MTH00055  14 FSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFG 91

                         90       100
                 ....*....|....*....|....*.
gi 134303117  90 LWA-FIILFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00055  92 FWVmYLFLIILTIGLIYEWVKGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-114 4.37e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 96.34  E-value: 4.37e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLS-PTHT 88
Cdd:COG0838   14 VALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFG 91

                         90       100
                 ....*....|....*....|....*.
gi 134303117  89 LLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:COG0838   92 LIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 14-114 3.04e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 93.97  E-value: 3.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  14 LSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLSPTHTLLWAF 93
Cdd:MTH00018  13 LSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFL--FPWCVLYNQIAPFGFWTM 90

                         90       100
                 ....*....|....*....|..
gi 134303117  94 II-LFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00018  91 VGfLFILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-115 3.14e-26

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 94.16  E-value: 3.14e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLSPTHTL 89
Cdd:PRK06602  17 VAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLG 94

                         90       100
                 ....*....|....*....|....*..
gi 134303117  90 LW-AFIILFLMTLGLIYEWIQGGLEWA 115
Cdd:PRK06602  95 FVeAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 31-116 3.78e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 88.90  E-value: 3.78e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  31 DNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLLSPTHTLLWAFIILFLMTLGLIYEWIQG 110
Cdd:MTH00202  32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111


                 ....*.
gi 134303117 111 GLEWAE 116
Cdd:MTH00202 112 SLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 6.44e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 88.38  E-value: 6.44e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKP-DNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWA 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAARSTaDREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 134303117  80 VQLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 10-114 4.25e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 76.12  E-value: 4.25e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLSPTHTL 89
Cdd:MTH00030  19 ILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLFS 96

                         90       100
                 ....*....|....*....|....*.
gi 134303117  90 LW-AFIILFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00030  97 FWiVYTFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 10-114 1.19e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 56.99  E-value: 1.19e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  10 IALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLP--FSIRFFLVAILFLLFDLEIALLLPlpWAVQLLS-PT 86
Cdd:PRK07928  13 LAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDAlGV 90

                         90       100
                 ....*....|....*....|....*...
gi 134303117  87 HTLLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:PRK07928  91 FGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 33-114 2.46e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 53.45  E-value: 2.46e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  33 EKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLLSPThTLLWAFIILFLMTLGLIYEWIQGGL 112
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVS-AFIEALIFVLILIVGLVYAWRKGAL 117


                 ..
gi 134303117 113 EW 114
Cdd:CHL00022 118 EW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-114 3.38e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.52  E-value: 3.38e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  34 KLSPYECGFDPLESAHlPFSIRFFLVAILFLLFDLEIALLlpLPWAVQL-LSPTHTLLWAFIILFLMTLGLIYEWIQGGL 112
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFkLLGLFGLIEMLLFIVLLTIGFIYAWKKGAL 123


                 ..
gi 134303117 113 EW 114
Cdd:PRK08489 124 EW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 1.54e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 51.05  E-value: 1.54e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   1 MNVTISTMTIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLpwav 80
Cdd:MTH00092   1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL---- 76

                         90       100       110
                 ....*....|....*....|....*....|....
gi 134303117  81 qLLSPTHTLLWAFIILFLMTLGLIYEWIQGGLEW 114
Cdd:MTH00092  77 -LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIW 109
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
24-114 2.69e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.90  E-value: 2.69e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  24 WLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLLSpTHTLLWAFIILFLMTLGL 103
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG-LFALIEMLIFVVMLLVGL 110

                         90
                 ....*....|.
gi 134303117 104 IYEWIQGGLEW 114
Cdd:PRK07756 111 AYAWKKKVLQW 121
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 31-114 6.71e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 41.81  E-value: 6.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117  31 DNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLLPLPWAVQLLSpthTLLWAFIILFLMTLGLIYEWIQG 110
Cdd:MTH00060  34 GFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFY---NFWYYYFFLLLLFLGFVVELFSG 110


                 ....
gi 134303117 111 GLEW 114
Cdd:MTH00060 111 YVRW 114
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 9-114 1.30e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 35.94  E-value: 1.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 134303117   9 TIALALSMILMLLNYWLTLMKPDNEKLSPYECGFDPLESAHLPFSIRFFLVAILFLLFDLEIALLlpLPWAVQLLSPTHT 88
Cdd:PRK06432  38 RISLKTEDILKKAAYEDTPPGSDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLL--FPWAFDFKRLGLI 115

                         90       100
                 ....*....|....*....|....*..
gi 134303117  89 LLWAFIILFLMTL-GLIYEWIQGGLEW 114
Cdd:PRK06432 116 PFIETLIFLAMPLfAVYYAFKMGYMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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