|
Name |
Accession |
Description |
Interval |
E-value |
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1024-1171 |
2.08e-69 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 230.08 E-value: 2.08e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1024 DRGTAFIIRFICNDDIYPGAPKFLHQDIdstrGIRNTYFEFETALACT-PSLVDCQVTDPAGNEYDLSALSMVRKPWTAV 1102
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDI----GDCSYFFEWETAYACVkPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAV 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133778978 1103 DTSAYGKRRHFYLSVCNPLPYIPGCHgIALGSCMVSEDNSFNLGVVQISPQATgNGSLSILYVNGDRCG 1171
Cdd:pfam00878 77 DTSGDGKKRHFYINVCHPLPGIPGCP-SAAGVCLVDKGKSWNLGVVQSSPQKT-NGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1315-1455 |
3.56e-67 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 223.53 E-value: 3.56e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1315 VYQRSTTIYFYCDRTT--QKPVFLKETS-DCSYMFEWRTQYACPPFNVTECSVQDAAGNSIDLSSLSRYSDNWEAVTRTG 1391
Cdd:pfam00878 1 GFQRATIIRFVCNDTAynGAPVFLHEDIgDCSYFFEWETAYACVKPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 1392 A--TEHYLINVCKslsPHAGTEPCPPEAAVCLLNGSKPVNLGKVRDGPQWTDGVTVLQYVDGDLCP 1455
Cdd:pfam00878 81 DgkKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
418-567 |
4.93e-55 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 188.86 E-value: 4.93e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 418 GFQRMSVINFECNKTAGKDgrgEPVFTGEV--DCTYFFTWDTKYACIKeKEDLLCGAINGK-KRYDLSVLARHSEseqNW 494
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNG---APVFLHEDigDCSYFFEWETAYACVK-PEDVDCQVTDAAgNEYDLSSLSRYSK---NW 73
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 495 EAVDGSQAESEKYFFINVCHrvlQEGKARNCPEDAAVCAVDKNGSKNLGKFVSSPTKEKGHIQLSYTDGDDCG 567
Cdd:pfam00878 74 EAVDTSGDGKKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
569-709 |
4.07e-51 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 177.69 E-value: 4.07e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 569 DKKISTNITLVCKPGDLESAPVLRAARSDGCFYEFEWHTAAACVlsKTEGENCTVLDAqAGFSFDLSLLTKKNGAYKVET 648
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDIGDCSYFFEWETAYACV--KPEDVDCQVTDA-AGNEYDLSSLSRYSKNWEAVD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 649 EKYD-----FYINVCGP-VSMDPCQSNSGACQVAKsGKSWNLGLSSTKLTYYDGMIQLSYRNGTPYN 709
Cdd:pfam00878 78 TSGDgkkrhFYINVCHPlPGIPGCPSAAGVCLVDK-GKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
716-868 |
2.29e-27 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 109.51 E-value: 2.29e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 716 RATLITFLCDRDAGVGFPEYQEEDNS--TYNFRWYTSYACPE-EPLECMVTDPSMmEQYDLSSLVKSEGgsggNWYAMEN 792
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdcSYFFEWETAYACVKpEDVDCQVTDAAG-NEYDLSSLSRYSK----NWEAVDT 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 793 SREHVTRRkYYLNVCRPLNPVPGCDRYASACQmkyenhegsLAETVSIsNLGVAKIGPVVEEsGSLLLEYVNGSAC 868
Cdd:pfam00878 79 SGDGKKRH-FYINVCHPLPGIPGCPSAAGVCL---------VDKGKSW-NLGVVQSSPQKTN-GSIQLSYVNGDLC 142
|
|
| FN2 |
cd00062 |
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
1890-1935 |
7.40e-19 |
|
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats.
:
Pssm-ID: 238019 Cd Length: 48 Bit Score: 81.97 E-value: 7.40e-19
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 133778978 1890 TDDGEPCVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:cd00062 1 NSDGAPCVFPFIYRGKWYHDCTTEGSNdgKLWCSTTPNYDRDGKWGYC 48
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1752-1887 |
4.46e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 80.23 E-value: 4.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1752 TSLITFHCKRGVSMGTPKLIR--TNDCDFVFEWETPIVCpdeVKTQG--CAVTDEQlLYSFNLTSLSTS-------TFKV 1820
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHedIGDCSYFFEWETAYAC---VKPEDvdCQVTDAA-GNEYDLSSLSRYsknweavDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 133778978 1821 TRDARTYSIGVCTAAAGLgqEGCK-DGGVCLLSGNKGASFGRLasmQLDYRHQDEAVILSYVNGDPCP 1887
Cdd:pfam00878 81 DGKKRHFYINVCHPLPGI--PGCPsAAGVCLVDKGKSWNLGVV---QSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1459-1592 |
9.87e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 79.08 E-value: 9.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1459 RRRSTIIRFTCSDNQVNSRPLFISAV-QDCEYTFSWPTPSACPVKSNThdDCQVTNPStGHLFDLSSLSGRAG----INA 1533
Cdd:pfam00878 2 FQRATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVKPEDV--DCQVTDAA-GNEYDLSSLSRYSKnweaVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 133778978 1534 SYSEKGLVF-MSICEEN---ENCGPGVGACF--GQTRISVGKASKRLSYKDQVLQLVYENGSPCP 1592
Cdd:pfam00878 79 SGDGKKRHFyINVCHPLpgiPGCPSAAGVCLvdKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1601-1724 |
1.29e-15 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 76.00 E-value: 1.29e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1601 SVISFVCRPEAGPtNRPMLISLDKQTCTLFFSWHTPLAC--EQATECTVRNGSSI-IDLSPLIHRTGGYEAYDESEDDTS 1677
Cdd:pfam00878 6 TIIRFVCNDTAYN-GAPVFLHEDIGDCSYFFEWETAYACvkPEDVDCQVTDAAGNeYDLSSLSRYSKNWEAVDTSGDGKK 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 133778978 1678 DTtpdFYINICQPLNPMHGvpCPAGASVCKVPVDGpPIDIGRVTGPP 1724
Cdd:pfam00878 85 RH---FYINVCHPLPGIPG--CPSAAGVCLVDKGK-SWNLGVVQSSP 125
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
121-260 |
1.72e-12 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 67.14 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 121 IQTSITFLCGKTL--GTPEFVTAT--DCVHYFEWRTTAACKKdifkaDKEVPCYAFDDKLQKHDLNPLIKLNGGYLVDDS 196
Cdd:pfam00878 4 RATIIRFVCNDTAynGAPVFLHEDigDCSYFFEWETAYACVK-----PEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 197 DPDTS---LFINVCRdidslrdPSTQLRVCPAGTAACLLKGNQAFDVGRPKEGLKlLSKDRLVLTYV 260
Cdd:pfam00878 79 SGDGKkrhFYINVCH-------PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQ-KTNGSIQLSYV 137
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1942-2076 |
3.46e-11 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 63.28 E-value: 3.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1942 RMSAIIFTCDESEDIGRPQVFSEDRG-CEVTFEWKTKVVCPPKK-MECKFV-QKHKTYDLRLLSSLTGSWDFV-----HE 2013
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdCSYFFEWETAYACVKPEdVDCQVTdAAGNEYDLSSLSRYSKNWEAVdtsgdGK 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 2014 GNSYFINLCQRVYKGPLdCSERASICKKSATGQVQvLGLVHTqKLEVIDETVIVTYSKGYPCG 2076
Cdd:pfam00878 84 KRHFYINVCHPLPGIPG-CPSAAGVCLVDKGKSWN-LGVVQS-SPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR super family |
cl39052 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
2234-2273 |
1.64e-05 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
The actual alignment was detected with superfamily member pfam00878:
Pssm-ID: 425923 Cd Length: 143 Bit Score: 47.11 E-value: 1.64e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 133778978 2234 SSTIFFHCDPLVKDGIPEFSHET-ADCQYLFSWYTSAVCPL 2273
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVK 45
|
|
| ATG27 super family |
cl39051 |
Autophagy-related protein 27; |
323-467 |
5.15e-05 |
|
Autophagy-related protein 27;
The actual alignment was detected with superfamily member pfam09451:
Pssm-ID: 476860 Cd Length: 261 Bit Score: 47.33 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 323 CSLSSEQHdiTIDLSPLAqygGSPYVSDGRE-------YTFFINVCGD-------TKVSLCNNKeAAVCQ------EKKA 382
Cdd:pfam09451 19 CSVDKGLK--KYDLSKLK---GPHSVSTTRDtppsttnTTWTINICEPlkkdkdvDKPDQCPKG-TRVCGitrvilDGDD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 383 DSTQV-KIAGRHQNQT---LRYSDGD--LTLIYSGGDecSSGFQRMSVINFECNKTAGKDGRGEPvftGEVDCTYFFTWD 456
Cdd:pfam09451 93 RITQViPIGGSNLDPEvtrLKTSDEKegLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVSYDG---SQEDDKLRLEWK 167
|
170
....*....|.
gi 133778978 457 TKYACIKEKED 467
Cdd:pfam09451 168 TKYACEKDESD 178
|
|
| ATG27 super family |
cl39051 |
Autophagy-related protein 27; |
1219-1355 |
3.00e-04 |
|
Autophagy-related protein 27;
The actual alignment was detected with superfamily member pfam09451:
Pssm-ID: 476860 Cd Length: 261 Bit Score: 45.02 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1219 NCQVKDprHGNLYDLKPLG-------LNDTIVSVGEYTYYLRVCGKLSSDvcsahDGSKAVSSCQE-----------KKG 1280
Cdd:pfam09451 18 DCSVDK--GLKKYDLSKLKgphsvstTRDTPPSTTNTTWTINICEPLKKD-----KDVDKPDQCPKgtrvcgitrviLDG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1281 PQGFQKVAGLLSQKLTFE---------NGLLKMNYTGGDtcHKVYQRSTTIYFYCDRTTQKPV-FLKETSDCSYMFEWRT 1350
Cdd:pfam09451 91 DDRITQVIPIGGSNLDPEvtrlktsdeKEGLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVsYDGSQEDDKLRLEWKT 168
|
....*
gi 133778978 1351 QYACP 1355
Cdd:pfam09451 169 KYACE 173
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1024-1171 |
2.08e-69 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 230.08 E-value: 2.08e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1024 DRGTAFIIRFICNDDIYPGAPKFLHQDIdstrGIRNTYFEFETALACT-PSLVDCQVTDPAGNEYDLSALSMVRKPWTAV 1102
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDI----GDCSYFFEWETAYACVkPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAV 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133778978 1103 DTSAYGKRRHFYLSVCNPLPYIPGCHgIALGSCMVSEDNSFNLGVVQISPQATgNGSLSILYVNGDRCG 1171
Cdd:pfam00878 77 DTSGDGKKRHFYINVCHPLPGIPGCP-SAAGVCLVDKGKSWNLGVVQSSPQKT-NGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1315-1455 |
3.56e-67 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 223.53 E-value: 3.56e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1315 VYQRSTTIYFYCDRTT--QKPVFLKETS-DCSYMFEWRTQYACPPFNVTECSVQDAAGNSIDLSSLSRYSDNWEAVTRTG 1391
Cdd:pfam00878 1 GFQRATIIRFVCNDTAynGAPVFLHEDIgDCSYFFEWETAYACVKPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 1392 A--TEHYLINVCKslsPHAGTEPCPPEAAVCLLNGSKPVNLGKVRDGPQWTDGVTVLQYVDGDLCP 1455
Cdd:pfam00878 81 DgkKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
418-567 |
4.93e-55 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 188.86 E-value: 4.93e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 418 GFQRMSVINFECNKTAGKDgrgEPVFTGEV--DCTYFFTWDTKYACIKeKEDLLCGAINGK-KRYDLSVLARHSEseqNW 494
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNG---APVFLHEDigDCSYFFEWETAYACVK-PEDVDCQVTDAAgNEYDLSSLSRYSK---NW 73
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 495 EAVDGSQAESEKYFFINVCHrvlQEGKARNCPEDAAVCAVDKNGSKNLGKFVSSPTKEKGHIQLSYTDGDDCG 567
Cdd:pfam00878 74 EAVDTSGDGKKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
569-709 |
4.07e-51 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 177.69 E-value: 4.07e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 569 DKKISTNITLVCKPGDLESAPVLRAARSDGCFYEFEWHTAAACVlsKTEGENCTVLDAqAGFSFDLSLLTKKNGAYKVET 648
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDIGDCSYFFEWETAYACV--KPEDVDCQVTDA-AGNEYDLSSLSRYSKNWEAVD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 649 EKYD-----FYINVCGP-VSMDPCQSNSGACQVAKsGKSWNLGLSSTKLTYYDGMIQLSYRNGTPYN 709
Cdd:pfam00878 78 TSGDgkkrhFYINVCHPlPGIPGCPSAAGVCLVDK-GKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
716-868 |
2.29e-27 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 109.51 E-value: 2.29e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 716 RATLITFLCDRDAGVGFPEYQEEDNS--TYNFRWYTSYACPE-EPLECMVTDPSMmEQYDLSSLVKSEGgsggNWYAMEN 792
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdcSYFFEWETAYACVKpEDVDCQVTDAAG-NEYDLSSLSRYSK----NWEAVDT 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 793 SREHVTRRkYYLNVCRPLNPVPGCDRYASACQmkyenhegsLAETVSIsNLGVAKIGPVVEEsGSLLLEYVNGSAC 868
Cdd:pfam00878 79 SGDGKKRH-FYINVCHPLPGIPGCPSAAGVCL---------VDKGKSW-NLGVVQSSPQKTN-GSIQLSYVNGDLC 142
|
|
| FN2 |
cd00062 |
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
1890-1935 |
7.40e-19 |
|
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats.
Pssm-ID: 238019 Cd Length: 48 Bit Score: 81.97 E-value: 7.40e-19
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 133778978 1890 TDDGEPCVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:cd00062 1 NSDGAPCVFPFIYRGKWYHDCTTEGSNdgKLWCSTTPNYDRDGKWGYC 48
|
|
| FN2 |
smart00059 |
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
1892-1935 |
9.62e-19 |
|
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function.
Pssm-ID: 128373 Cd Length: 49 Bit Score: 81.58 E-value: 9.62e-19
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 133778978 1892 DGEPCVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:smart00059 4 DGEPCVFPFIYNGKKYHDCTSEGRSdgMLWCSTTPNYDRDGKWGFC 49
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1752-1887 |
4.46e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 80.23 E-value: 4.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1752 TSLITFHCKRGVSMGTPKLIR--TNDCDFVFEWETPIVCpdeVKTQG--CAVTDEQlLYSFNLTSLSTS-------TFKV 1820
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHedIGDCSYFFEWETAYAC---VKPEDvdCQVTDAA-GNEYDLSSLSRYsknweavDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 133778978 1821 TRDARTYSIGVCTAAAGLgqEGCK-DGGVCLLSGNKGASFGRLasmQLDYRHQDEAVILSYVNGDPCP 1887
Cdd:pfam00878 81 DGKKRHFYINVCHPLPGI--PGCPsAAGVCLVDKGKSWNLGVV---QSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1459-1592 |
9.87e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 79.08 E-value: 9.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1459 RRRSTIIRFTCSDNQVNSRPLFISAV-QDCEYTFSWPTPSACPVKSNThdDCQVTNPStGHLFDLSSLSGRAG----INA 1533
Cdd:pfam00878 2 FQRATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVKPEDV--DCQVTDAA-GNEYDLSSLSRYSKnweaVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 133778978 1534 SYSEKGLVF-MSICEEN---ENCGPGVGACF--GQTRISVGKASKRLSYKDQVLQLVYENGSPCP 1592
Cdd:pfam00878 79 SGDGKKRHFyINVCHPLpgiPGCPSAAGVCLvdKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| fn2 |
pfam00040 |
Fibronectin type II domain; |
1896-1935 |
4.10e-16 |
|
Fibronectin type II domain;
Pssm-ID: 459645 Cd Length: 42 Bit Score: 73.76 E-value: 4.10e-16
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 133778978 1896 CVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:pfam00040 1 CVFPFKYKGKWYHTCTTDGRRsgRLWCATTANYDGDGKWGYC 42
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1601-1724 |
1.29e-15 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 76.00 E-value: 1.29e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1601 SVISFVCRPEAGPtNRPMLISLDKQTCTLFFSWHTPLAC--EQATECTVRNGSSI-IDLSPLIHRTGGYEAYDESEDDTS 1677
Cdd:pfam00878 6 TIIRFVCNDTAYN-GAPVFLHEDIGDCSYFFEWETAYACvkPEDVDCQVTDAAGNeYDLSSLSRYSKNWEAVDTSGDGKK 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 133778978 1678 DTtpdFYINICQPLNPMHGvpCPAGASVCKVPVDGpPIDIGRVTGPP 1724
Cdd:pfam00878 85 RH---FYINVCHPLPGIPG--CPSAAGVCLVDKGK-SWNLGVVQSSP 125
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
121-260 |
1.72e-12 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 67.14 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 121 IQTSITFLCGKTL--GTPEFVTAT--DCVHYFEWRTTAACKKdifkaDKEVPCYAFDDKLQKHDLNPLIKLNGGYLVDDS 196
Cdd:pfam00878 4 RATIIRFVCNDTAynGAPVFLHEDigDCSYFFEWETAYACVK-----PEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 197 DPDTS---LFINVCRdidslrdPSTQLRVCPAGTAACLLKGNQAFDVGRPKEGLKlLSKDRLVLTYV 260
Cdd:pfam00878 79 SGDGKkrhFYINVCH-------PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQ-KTNGSIQLSYV 137
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1942-2076 |
3.46e-11 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 63.28 E-value: 3.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1942 RMSAIIFTCDESEDIGRPQVFSEDRG-CEVTFEWKTKVVCPPKK-MECKFV-QKHKTYDLRLLSSLTGSWDFV-----HE 2013
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdCSYFFEWETAYACVKPEdVDCQVTdAAGNEYDLSSLSRYSKNWEAVdtsgdGK 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 2014 GNSYFINLCQRVYKGPLdCSERASICKKSATGQVQvLGLVHTqKLEVIDETVIVTYSKGYPCG 2076
Cdd:pfam00878 84 KRHFYINVCHPLPGIPG-CPSAAGVCLVDKGKSWN-LGVVQS-SPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
2234-2273 |
1.64e-05 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 47.11 E-value: 1.64e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 133778978 2234 SSTIFFHCDPLVKDGIPEFSHET-ADCQYLFSWYTSAVCPL 2273
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVK 45
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
323-467 |
5.15e-05 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 47.33 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 323 CSLSSEQHdiTIDLSPLAqygGSPYVSDGRE-------YTFFINVCGD-------TKVSLCNNKeAAVCQ------EKKA 382
Cdd:pfam09451 19 CSVDKGLK--KYDLSKLK---GPHSVSTTRDtppsttnTTWTINICEPlkkdkdvDKPDQCPKG-TRVCGitrvilDGDD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 383 DSTQV-KIAGRHQNQT---LRYSDGD--LTLIYSGGDecSSGFQRMSVINFECNKTAGKDGRGEPvftGEVDCTYFFTWD 456
Cdd:pfam09451 93 RITQViPIGGSNLDPEvtrLKTSDEKegLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVSYDG---SQEDDKLRLEWK 167
|
170
....*....|.
gi 133778978 457 TKYACIKEKED 467
Cdd:pfam09451 168 TKYACEKDESD 178
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
1219-1355 |
3.00e-04 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 45.02 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1219 NCQVKDprHGNLYDLKPLG-------LNDTIVSVGEYTYYLRVCGKLSSDvcsahDGSKAVSSCQE-----------KKG 1280
Cdd:pfam09451 18 DCSVDK--GLKKYDLSKLKgphsvstTRDTPPSTTNTTWTINICEPLKKD-----KDVDKPDQCPKgtrvcgitrviLDG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1281 PQGFQKVAGLLSQKLTFE---------NGLLKMNYTGGDtcHKVYQRSTTIYFYCDRTTQKPV-FLKETSDCSYMFEWRT 1350
Cdd:pfam09451 91 DDRITQVIPIGGSNLDPEvtrlktsdeKEGLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVsYDGSQEDDKLRLEWKT 168
|
....*
gi 133778978 1351 QYACP 1355
Cdd:pfam09451 169 KYACE 173
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1024-1171 |
2.08e-69 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 230.08 E-value: 2.08e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1024 DRGTAFIIRFICNDDIYPGAPKFLHQDIdstrGIRNTYFEFETALACT-PSLVDCQVTDPAGNEYDLSALSMVRKPWTAV 1102
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDI----GDCSYFFEWETAYACVkPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAV 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133778978 1103 DTSAYGKRRHFYLSVCNPLPYIPGCHgIALGSCMVSEDNSFNLGVVQISPQATgNGSLSILYVNGDRCG 1171
Cdd:pfam00878 77 DTSGDGKKRHFYINVCHPLPGIPGCP-SAAGVCLVDKGKSWNLGVVQSSPQKT-NGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1315-1455 |
3.56e-67 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 223.53 E-value: 3.56e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1315 VYQRSTTIYFYCDRTT--QKPVFLKETS-DCSYMFEWRTQYACPPFNVTECSVQDAAGNSIDLSSLSRYSDNWEAVTRTG 1391
Cdd:pfam00878 1 GFQRATIIRFVCNDTAynGAPVFLHEDIgDCSYFFEWETAYACVKPEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 1392 A--TEHYLINVCKslsPHAGTEPCPPEAAVCLLNGSKPVNLGKVRDGPQWTDGVTVLQYVDGDLCP 1455
Cdd:pfam00878 81 DgkKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
418-567 |
4.93e-55 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 188.86 E-value: 4.93e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 418 GFQRMSVINFECNKTAGKDgrgEPVFTGEV--DCTYFFTWDTKYACIKeKEDLLCGAINGK-KRYDLSVLARHSEseqNW 494
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNG---APVFLHEDigDCSYFFEWETAYACVK-PEDVDCQVTDAAgNEYDLSSLSRYSK---NW 73
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 495 EAVDGSQAESEKYFFINVCHrvlQEGKARNCPEDAAVCAVDKNGSKNLGKFVSSPTKEKGHIQLSYTDGDDCG 567
Cdd:pfam00878 74 EAVDTSGDGKKRHFYINVCH---PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
569-709 |
4.07e-51 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 177.69 E-value: 4.07e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 569 DKKISTNITLVCKPGDLESAPVLRAARSDGCFYEFEWHTAAACVlsKTEGENCTVLDAqAGFSFDLSLLTKKNGAYKVET 648
Cdd:pfam00878 1 GFQRATIIRFVCNDTAYNGAPVFLHEDIGDCSYFFEWETAYACV--KPEDVDCQVTDA-AGNEYDLSSLSRYSKNWEAVD 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 649 EKYD-----FYINVCGP-VSMDPCQSNSGACQVAKsGKSWNLGLSSTKLTYYDGMIQLSYRNGTPYN 709
Cdd:pfam00878 78 TSGDgkkrhFYINVCHPlPGIPGCPSAAGVCLVDK-GKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
716-868 |
2.29e-27 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 109.51 E-value: 2.29e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 716 RATLITFLCDRDAGVGFPEYQEEDNS--TYNFRWYTSYACPE-EPLECMVTDPSMmEQYDLSSLVKSEGgsggNWYAMEN 792
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdcSYFFEWETAYACVKpEDVDCQVTDAAG-NEYDLSSLSRYSK----NWEAVDT 78
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 133778978 793 SREHVTRRkYYLNVCRPLNPVPGCDRYASACQmkyenhegsLAETVSIsNLGVAKIGPVVEEsGSLLLEYVNGSAC 868
Cdd:pfam00878 79 SGDGKKRH-FYINVCHPLPGIPGCPSAAGVCL---------VDKGKSW-NLGVVQSSPQKTN-GSIQLSYVNGDLC 142
|
|
| FN2 |
cd00062 |
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
1890-1935 |
7.40e-19 |
|
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats.
Pssm-ID: 238019 Cd Length: 48 Bit Score: 81.97 E-value: 7.40e-19
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 133778978 1890 TDDGEPCVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:cd00062 1 NSDGAPCVFPFIYRGKWYHDCTTEGSNdgKLWCSTTPNYDRDGKWGYC 48
|
|
| FN2 |
smart00059 |
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
1892-1935 |
9.62e-19 |
|
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function.
Pssm-ID: 128373 Cd Length: 49 Bit Score: 81.58 E-value: 9.62e-19
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 133778978 1892 DGEPCVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:smart00059 4 DGEPCVFPFIYNGKKYHDCTSEGRSdgMLWCSTTPNYDRDGKWGFC 49
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1752-1887 |
4.46e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 80.23 E-value: 4.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1752 TSLITFHCKRGVSMGTPKLIR--TNDCDFVFEWETPIVCpdeVKTQG--CAVTDEQlLYSFNLTSLSTS-------TFKV 1820
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHedIGDCSYFFEWETAYAC---VKPEDvdCQVTDAA-GNEYDLSSLSRYsknweavDTSG 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 133778978 1821 TRDARTYSIGVCTAAAGLgqEGCK-DGGVCLLSGNKGASFGRLasmQLDYRHQDEAVILSYVNGDPCP 1887
Cdd:pfam00878 81 DGKKRHFYINVCHPLPGI--PGCPsAAGVCLVDKGKSWNLGVV---QSSPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1459-1592 |
9.87e-17 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 79.08 E-value: 9.87e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1459 RRRSTIIRFTCSDNQVNSRPLFISAV-QDCEYTFSWPTPSACPVKSNThdDCQVTNPStGHLFDLSSLSGRAG----INA 1533
Cdd:pfam00878 2 FQRATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVKPEDV--DCQVTDAA-GNEYDLSSLSRYSKnweaVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 133778978 1534 SYSEKGLVF-MSICEEN---ENCGPGVGACF--GQTRISVGKASKRLSYKDQVLQLVYENGSPCP 1592
Cdd:pfam00878 79 SGDGKKRHFyINVCHPLpgiPGCPSAAGVCLvdKGKSWNLGVVQSSPQKTNGSIQLSYVNGDLCG 143
|
|
| fn2 |
pfam00040 |
Fibronectin type II domain; |
1896-1935 |
4.10e-16 |
|
Fibronectin type II domain;
Pssm-ID: 459645 Cd Length: 42 Bit Score: 73.76 E-value: 4.10e-16
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 133778978 1896 CVFPFIYKGKSYDECVLEGRA--KLWCSKTANYDRDHEWGFC 1935
Cdd:pfam00040 1 CVFPFKYKGKWYHTCTTDGRRsgRLWCATTANYDGDGKWGYC 42
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1601-1724 |
1.29e-15 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 76.00 E-value: 1.29e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1601 SVISFVCRPEAGPtNRPMLISLDKQTCTLFFSWHTPLAC--EQATECTVRNGSSI-IDLSPLIHRTGGYEAYDESEDDTS 1677
Cdd:pfam00878 6 TIIRFVCNDTAYN-GAPVFLHEDIGDCSYFFEWETAYACvkPEDVDCQVTDAAGNeYDLSSLSRYSKNWEAVDTSGDGKK 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 133778978 1678 DTtpdFYINICQPLNPMHGvpCPAGASVCKVPVDGpPIDIGRVTGPP 1724
Cdd:pfam00878 85 RH---FYINVCHPLPGIPG--CPSAAGVCLVDKGK-SWNLGVVQSSP 125
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
121-260 |
1.72e-12 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 67.14 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 121 IQTSITFLCGKTL--GTPEFVTAT--DCVHYFEWRTTAACKKdifkaDKEVPCYAFDDKLQKHDLNPLIKLNGGYLVDDS 196
Cdd:pfam00878 4 RATIIRFVCNDTAynGAPVFLHEDigDCSYFFEWETAYACVK-----PEDVDCQVTDAAGNEYDLSSLSRYSKNWEAVDT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 133778978 197 DPDTS---LFINVCRdidslrdPSTQLRVCPAGTAACLLKGNQAFDVGRPKEGLKlLSKDRLVLTYV 260
Cdd:pfam00878 79 SGDGKkrhFYINVCH-------PLPGIPGCPSAAGVCLVDKGKSWNLGVVQSSPQ-KTNGSIQLSYV 137
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
1942-2076 |
3.46e-11 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 63.28 E-value: 3.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1942 RMSAIIFTCDESEDIGRPQVFSEDRG-CEVTFEWKTKVVCPPKK-MECKFV-QKHKTYDLRLLSSLTGSWDFV-----HE 2013
Cdd:pfam00878 4 RATIIRFVCNDTAYNGAPVFLHEDIGdCSYFFEWETAYACVKPEdVDCQVTdAAGNEYDLSSLSRYSKNWEAVdtsgdGK 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 133778978 2014 GNSYFINLCQRVYKGPLdCSERASICKKSATGQVQvLGLVHTqKLEVIDETVIVTYSKGYPCG 2076
Cdd:pfam00878 84 KRHFYINVCHPLPGIPG-CPSAAGVCLVDKGKSWN-LGVVQS-SPQKTNGSIQLSYVNGDLCG 143
|
|
| CIMR |
pfam00878 |
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent ... |
2234-2273 |
1.64e-05 |
|
Cation-independent mannose-6-phosphate receptor repeat; The cation-independent mannose-6-phosphate receptor contains 15 copies of a repeat.
Pssm-ID: 425923 Cd Length: 143 Bit Score: 47.11 E-value: 1.64e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 133778978 2234 SSTIFFHCDPLVKDGIPEFSHET-ADCQYLFSWYTSAVCPL 2273
Cdd:pfam00878 5 ATIIRFVCNDTAYNGAPVFLHEDiGDCSYFFEWETAYACVK 45
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
1627-1708 |
2.35e-05 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 48.48 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1627 CTLFFSWHTPLACEQATECTVRNGSSIIDLSPLihrTGGYEAYDESEDDTSDTTPDFYINICQPLNPMHGVP----CPAG 1702
Cdd:pfam09451 1 LLLLLPLLAAASAVSAFDCSVDKGLKKYDLSKL---KGPHSVSTTRDTPPSTTNTTWTINICEPLKKDKDVDkpdqCPKG 77
|
....*.
gi 133778978 1703 ASVCKV 1708
Cdd:pfam09451 78 TRVCGI 83
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
323-467 |
5.15e-05 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 47.33 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 323 CSLSSEQHdiTIDLSPLAqygGSPYVSDGRE-------YTFFINVCGD-------TKVSLCNNKeAAVCQ------EKKA 382
Cdd:pfam09451 19 CSVDKGLK--KYDLSKLK---GPHSVSTTRDtppsttnTTWTINICEPlkkdkdvDKPDQCPKG-TRVCGitrvilDGDD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 383 DSTQV-KIAGRHQNQT---LRYSDGD--LTLIYSGGDecSSGFQRMSVINFECNKTAGKDGRGEPvftGEVDCTYFFTWD 456
Cdd:pfam09451 93 RITQViPIGGSNLDPEvtrLKTSDEKegLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVSYDG---SQEDDKLRLEWK 167
|
170
....*....|.
gi 133778978 457 TKYACIKEKED 467
Cdd:pfam09451 168 TKYACEKDESD 178
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
607-754 |
5.84e-05 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 47.33 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 607 TAAACVLSKTEGENCTVldAQAGFSFDLSLLtkkNGAYKVETEKYD--------FYINVCGPVSMDP-------CQSNSG 671
Cdd:pfam09451 5 LPLLAAASAVSAFDCSV--DKGLKKYDLSKL---KGPHSVSTTRDTppsttnttWTINICEPLKKDKdvdkpdqCPKGTR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 672 ACQVAK---------------SGKSWNLGLSSTKLTYYDGMIQLSYRNGTpynnEKHTPRATLITFLCDRDAgVGFPEYQ 736
Cdd:pfam09451 80 VCGITRvildgddritqvipiGGSNLDPEVTRLKTSDEKEGLRLTLKGGK----WGGNKQDAIIEFICDSDS-LTFVSYD 154
|
170
....*....|....*....
gi 133778978 737 -EEDNSTYNFRWYTSYACP 754
Cdd:pfam09451 155 gSQEDDKLRLEWKTKYACE 173
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
1219-1355 |
3.00e-04 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 45.02 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1219 NCQVKDprHGNLYDLKPLG-------LNDTIVSVGEYTYYLRVCGKLSSDvcsahDGSKAVSSCQE-----------KKG 1280
Cdd:pfam09451 18 DCSVDK--GLKKYDLSKLKgphsvstTRDTPPSTTNTTWTINICEPLKKD-----KDVDKPDQCPKgtrvcgitrviLDG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1281 PQGFQKVAGLLSQKLTFE---------NGLLKMNYTGGDtcHKVYQRSTTIYFYCDRTTQKPV-FLKETSDCSYMFEWRT 1350
Cdd:pfam09451 91 DDRITQVIPIGGSNLDPEvtrlktsdeKEGLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVsYDGSQEDDKLRLEWKT 168
|
....*
gi 133778978 1351 QYACP 1355
Cdd:pfam09451 169 KYACE 173
|
|
| Man-6-P_recep |
pfam02157 |
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation ... |
645-757 |
3.63e-04 |
|
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation independent mannose-6-phosphate receptors.
Pssm-ID: 460468 Cd Length: 254 Bit Score: 44.77 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 645 KVETEKYDFYINVCGPVSMDPcqSNSGACQVAKS-GKSWNLG-LSSTKLTYYDGMIQLSYRNGTPYNNEKHT-PRATLIT 721
Cdd:pfam02157 42 GSGPETYTYNFRVCREVGKTA--SDAGLVQIDKKnGKETVIGrINETQVFNGSDWIMLIYKGGDEYGSHCGKeKRKAIIM 119
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 133778978 722 FLCDRDAGVG-----FPEYQEEDNSTYNFRWYTSYACPEEP 757
Cdd:pfam02157 120 ISCNRKVLADnftivIEEREKEQDCFYLFELDSSLACPPED 160
|
|
| Man-6-P_recep |
pfam02157 |
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation ... |
1210-1356 |
7.31e-04 |
|
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation independent mannose-6-phosphate receptors.
Pssm-ID: 460468 Cd Length: 254 Bit Score: 44.00 E-value: 7.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1210 CPVIREEGDNCQVKDPRHGNLYDLKPLGLNDTI-VSVGEYTYYLRVCGKLSSdvcSAHDGSKAvsscQEKKGPQGfQKVA 1288
Cdd:pfam02157 9 CDLVGEESSESQKERALLKRLEPLANKSFEVTVgSGPETYTYNFRVCREVGK---TASDAGLV----QIDKKNGK-ETVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1289 GLLSQKLTFeNGL--LKMNYTGGDT----CHKvYQRSTTIYFYCDRTTQKPVF-------LKETsDCSYMFEWRTQYACP 1355
Cdd:pfam02157 81 GRINETQVF-NGSdwIMLIYKGGDEygshCGK-EKRKAIIMISCNRKVLADNFtivieerEKEQ-DCFYLFELDSSLACP 157
|
.
gi 133778978 1356 P 1356
Cdd:pfam02157 158 P 158
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
470-611 |
1.37e-03 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 43.09 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 470 CGAINGKKRYDLSVLARHSESEQNWEAVDGSQAESekyFFINVCHRVLQEG---KARNCPEDAAVCAVDKN--------- 537
Cdd:pfam09451 19 CSVDKGLKKYDLSKLKGPHSVSTTRDTPPSTTNTT---WTINICEPLKKDKdvdKPDQCPKGTRVCGITRVildgddrit 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 538 -----GSKNLGKFVS--SPTKEKGHIQLSYTDGDdcGSDKKISTNITLVCKPGDLESAPVLRAARSDgcFYEFEWHTAAA 610
Cdd:pfam09451 96 qvipiGGSNLDPEVTrlKTSDEKEGLRLTLKGGK--WGGNKQDAIIEFICDSDSLTFVSYDGSQEDD--KLRLEWKTKYA 171
|
.
gi 133778978 611 C 611
Cdd:pfam09451 172 C 172
|
|
| Man-6-P_recep |
pfam02157 |
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation ... |
1717-1791 |
3.50e-03 |
|
Mannose-6-phosphate receptor; This family includes both Cation-dependent and cation independent mannose-6-phosphate receptors.
Pssm-ID: 460468 Cd Length: 254 Bit Score: 41.69 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1717 IGRVTGPPIFNPVaNEVYLNF----ESSTHCladRYMNYTSLITFHCKRGVSMGTPKLI-----RTNDCDFVFEWETPIV 1787
Cdd:pfam02157 80 IGRINETQVFNGS-DWIMLIYkggdEYGSHC---GKEKRKAIIMISCNRKVLADNFTIVieereKEQDCFYLFELDSSLA 155
|
....
gi 133778978 1788 CPDE 1791
Cdd:pfam02157 156 CPPE 159
|
|
| ATG27 |
pfam09451 |
Autophagy-related protein 27; |
1361-1518 |
7.02e-03 |
|
Autophagy-related protein 27;
Pssm-ID: 430622 Cd Length: 261 Bit Score: 40.78 E-value: 7.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1361 ECSVqDAAGNSIDLSSLSR-YSDNWEAVTRTGAT-EHYLINVCKSLSPHAGTEP---CPPEAAVCLL---------NGSK 1426
Cdd:pfam09451 18 DCSV-DKGLKKYDLSKLKGpHSVSTTRDTPPSTTnTTWTINICEPLKKDKDVDKpdqCPKGTRVCGItrvildgddRITQ 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133778978 1427 PVNLGKVRDGPQWT--------DGVTvLQYVDGdlcPDKIRRRSTIIRFTCSDNQVNSRPLFISAVQDcEYTFSWPTPSA 1498
Cdd:pfam09451 97 VIPIGGSNLDPEVTrlktsdekEGLR-LTLKGG---KWGGNKQDAIIEFICDSDSLTFVSYDGSQEDD-KLRLEWKTKYA 171
|
170 180
....*....|....*....|
gi 133778978 1499 CPVKSNTHDDCQVTNPSTGH 1518
Cdd:pfam09451 172 CEKDESDPDDGDGGGNGGSG 191
|
|
| |
