|
Name |
Accession |
Description |
Interval |
E-value |
| MurB |
COG0812 |
UDP-N-acetylenolpyruvoylglucosamine reductase [Cell wall/membrane/envelope biogenesis]; ... |
7-280 |
4.74e-92 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylenolpyruvoylglucosamine reductase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440574 [Multi-domain] Cd Length: 279 Bit Score: 273.43 E-value: 4.74e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 7 VDLRDFTTIKIGGVGSYMFFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIKISEtkeGIL 82
Cdd:COG0812 1 EPLAPHTTFRIGGPADLLVEPASEEELAALLRaaREAGLPVLVLGGGSNLLVRDdgFDGLVIRLGRLKGIEVDD---GVL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 83 VKASAGVPLKDLIKLSVENNVE--EFykLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYR 159
Cdd:COG0812 78 VTAGAGENWHDLVRFALEAGLSglEF--LAGIPGTVGGAPVMNAGAYGGEIKDVLESVEVLDRTgEVRTLSAEECGFGYR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 160 KTEFENKP--VLYGEF-LFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFS 236
Cdd:COG0812 156 DSIFKRERyiILSVTFrLKKGDPAEIAAVMDAVLAIRRSKQPLELPSAGSFFKNPPGDSAGWLIEQAGLKGYRIGGAQVS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1327556126 237 QKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:COG0812 236 EKHANFLVNRGGATAADVLALIEEVQARVKEKFGVELEPEVRII 279
|
|
| murB |
PRK13905 |
UDP-N-acetylmuramate dehydrogenase; |
5-280 |
7.14e-77 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237553 [Multi-domain] Cd Length: 298 Bit Score: 235.78 E-value: 7.14e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 5 KNVDLRDFTTIKIGGVGSYMFFPENE---KEFLDIYKKHkNDKLCILGKGSNTIFGD--FNG-VLINTKHFYDIKISETK 78
Cdd:PRK13905 15 ENEPLARYTSFRVGGPADYLVEPADIedlQEFLKLLKEN-NIPVTVLGNGSNLLVRDggIRGvVIRLGKGLNEIEVEGNR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 79 egilVKASAGVPLKDLIKLSVENNVE--EFykLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIF 155
Cdd:PRK13905 94 ----ITAGAGAPLIKLARFAAEAGLSglEF--AAGIPGTVGGAVFMNAGAYGGETADVLESVEVLDRDgEIKTLSNEELG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 156 YTYRKTEFENKP--VLYGEF-LFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKD 232
Cdd:PRK13905 168 FGYRHSALQEEGliVLSATFqLEPGDKEEIKARMDELLARREATQPLEYPSAGSVFKNPPGHFAGKLIEEAGLKGYRIGG 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1327556126 233 IGFSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK13905 248 AQVSEKHANFIINTGGATAADIEDLIEHVQKTVKEKFGVELEWEVRII 295
|
|
| murB |
TIGR00179 |
UDP-N-acetylenolpyruvoylglucosamine reductase; This model describes MurB, ... |
9-280 |
1.31e-56 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase; This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 272945 [Multi-domain] Cd Length: 284 Bit Score: 183.42 E-value: 1.31e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 9 LRDFTTIKIGGVGSYMFFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIKISEtkeGILVK 84
Cdd:TIGR00179 1 LAEFTTYKIGGNARHIVCPESIEQLVNVLDnaKEEDQPLLILGEGSNLLILDdgRGGVIINLGKGIDIEDDE---GEYVH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 85 ASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYRKTEF 163
Cdd:TIGR00179 78 VGGGENWHKLVKYALKNGLSGLEFLAGIPGTVGGAVIMNAGAYGVEISEVLVYATILLATgKTEWLTNEQLGFGYRTSIF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 164 ENKPV---------LYGEFLFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIG 234
Cdd:TIGR00179 158 QHKYVglvlkaefqLTLGFGTRLDPETITAQQVFNKVCRMRTSHYPDPNAGSFFKNPSPNHAGRLIEECGLKGYQIGGAA 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1327556126 235 FSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:TIGR00179 238 VSKQHANFLVNIDNAKSEDVLDLIEHVKAEVGEKYGILLEPEVKII 283
|
|
| MurB_C |
pfam02873 |
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; Members of this family are ... |
187-280 |
6.22e-40 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; Members of this family are UDP-N-acetylenolpyruvoylglucosamine reductase enzymes EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.
Pssm-ID: 460730 [Multi-domain] Cd Length: 99 Bit Score: 134.40 E-value: 6.22e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 187 QTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHANFLINYQNASFQNVIDILSIAKERVY 266
Cdd:pfam02873 6 LELRRRRLAKQPLDPPSAGSFFKNPVGHSAGWLIEQAGLKGYRIGGAQVSEKHANFLVNTGGATAADVLALIEEVRERVK 85
|
90
....*....|....
gi 1327556126 267 KAFNIILEEEIKLV 280
Cdd:pfam02873 86 EKFGVELEPEVRII 99
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| MurB |
COG0812 |
UDP-N-acetylenolpyruvoylglucosamine reductase [Cell wall/membrane/envelope biogenesis]; ... |
7-280 |
4.74e-92 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylenolpyruvoylglucosamine reductase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440574 [Multi-domain] Cd Length: 279 Bit Score: 273.43 E-value: 4.74e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 7 VDLRDFTTIKIGGVGSYMFFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIKISEtkeGIL 82
Cdd:COG0812 1 EPLAPHTTFRIGGPADLLVEPASEEELAALLRaaREAGLPVLVLGGGSNLLVRDdgFDGLVIRLGRLKGIEVDD---GVL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 83 VKASAGVPLKDLIKLSVENNVE--EFykLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYR 159
Cdd:COG0812 78 VTAGAGENWHDLVRFALEAGLSglEF--LAGIPGTVGGAPVMNAGAYGGEIKDVLESVEVLDRTgEVRTLSAEECGFGYR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 160 KTEFENKP--VLYGEF-LFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFS 236
Cdd:COG0812 156 DSIFKRERyiILSVTFrLKKGDPAEIAAVMDAVLAIRRSKQPLELPSAGSFFKNPPGDSAGWLIEQAGLKGYRIGGAQVS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1327556126 237 QKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:COG0812 236 EKHANFLVNRGGATAADVLALIEEVQARVKEKFGVELEPEVRII 279
|
|
| murB |
PRK13905 |
UDP-N-acetylmuramate dehydrogenase; |
5-280 |
7.14e-77 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237553 [Multi-domain] Cd Length: 298 Bit Score: 235.78 E-value: 7.14e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 5 KNVDLRDFTTIKIGGVGSYMFFPENE---KEFLDIYKKHkNDKLCILGKGSNTIFGD--FNG-VLINTKHFYDIKISETK 78
Cdd:PRK13905 15 ENEPLARYTSFRVGGPADYLVEPADIedlQEFLKLLKEN-NIPVTVLGNGSNLLVRDggIRGvVIRLGKGLNEIEVEGNR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 79 egilVKASAGVPLKDLIKLSVENNVE--EFykLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIF 155
Cdd:PRK13905 94 ----ITAGAGAPLIKLARFAAEAGLSglEF--AAGIPGTVGGAVFMNAGAYGGETADVLESVEVLDRDgEIKTLSNEELG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 156 YTYRKTEFENKP--VLYGEF-LFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKD 232
Cdd:PRK13905 168 FGYRHSALQEEGliVLSATFqLEPGDKEEIKARMDELLARREATQPLEYPSAGSVFKNPPGHFAGKLIEEAGLKGYRIGG 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1327556126 233 IGFSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK13905 248 AQVSEKHANFIINTGGATAADIEDLIEHVQKTVKEKFGVELEWEVRII 295
|
|
| murB |
TIGR00179 |
UDP-N-acetylenolpyruvoylglucosamine reductase; This model describes MurB, ... |
9-280 |
1.31e-56 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase; This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 272945 [Multi-domain] Cd Length: 284 Bit Score: 183.42 E-value: 1.31e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 9 LRDFTTIKIGGVGSYMFFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIKISEtkeGILVK 84
Cdd:TIGR00179 1 LAEFTTYKIGGNARHIVCPESIEQLVNVLDnaKEEDQPLLILGEGSNLLILDdgRGGVIINLGKGIDIEDDE---GEYVH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 85 ASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYRKTEF 163
Cdd:TIGR00179 78 VGGGENWHKLVKYALKNGLSGLEFLAGIPGTVGGAVIMNAGAYGVEISEVLVYATILLATgKTEWLTNEQLGFGYRTSIF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 164 ENKPV---------LYGEFLFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIG 234
Cdd:TIGR00179 158 QHKYVglvlkaefqLTLGFGTRLDPETITAQQVFNKVCRMRTSHYPDPNAGSFFKNPSPNHAGRLIEECGLKGYQIGGAA 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1327556126 235 FSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:TIGR00179 238 VSKQHANFLVNIDNAKSEDVLDLIEHVKAEVGEKYGILLEPEVKII 283
|
|
| murB |
PRK13904 |
UDP-N-acetylmuramate dehydrogenase; |
5-280 |
9.34e-46 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 184384 [Multi-domain] Cd Length: 257 Bit Score: 154.69 E-value: 9.34e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 5 KNVDLRDFTTIKIGGVGSYMFFPENEkeflDIYKKHKndklcILGKGSNTIFG-DFNGVLINTKHFYDIKIsetkEGILV 83
Cdd:PRK13904 3 KIIDFSKYSSVKIGPPLEVLVLEEID----DFSQDGQ-----IIGGANNLLISpNPKNLAILGKNFDYIKI----DGECL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 84 KASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVwyIDNDEivYKPKEEIFYTYRKTEF 163
Cdd:PRK13904 70 EIGGATKSGKIFNYAKKNNLGGFEFLGKLPGTLGGLVKMNAGLKEYEISNNLESI--CTNGG--WIEKEDIGFGYRSSGI 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 164 eNKPVLYGEFlfKKSQQDIKPLAQTINQKRmEAQPlNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHANFL 243
Cdd:PRK13904 146 -NGVILEARF--KKTHGFDEELLEAFKSMR-KNQP-KGPSFGSCFKNPKGDYAGRLIEAVGLKGYCKGGAGFSEEHANFL 220
|
250 260 270
....*....|....*....|....*....|....*..
gi 1327556126 244 INYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK13904 221 VNLGGATFEDALDLIELAKKRVLEEFGINLEEEVIIL 257
|
|
| PRK12436 |
PRK12436 |
UDP-N-acetylmuramate dehydrogenase; |
9-280 |
1.39e-44 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 171497 [Multi-domain] Cd Length: 305 Bit Score: 152.86 E-value: 1.39e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 9 LRDFTTIKIGGVGSYMFFPENEKEFLDI--YKKHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIkiseTKEGILVK 84
Cdd:PRK12436 25 LKNHTHIKVGGKADVFVAPTNYDEIQEVikYANKYNIPVTFLGNGSNVIIKDggIRGITVSLIHITGV----TVTGTTIV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 85 ASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEI-FDFIKGVWYIDNDEIVYKPKEEIFYTYRKTEF 163
Cdd:PRK12436 101 AQCGAAIIDVSRIALDHNLTGLEFACGIPGSVGGALYMNAGAYGGEIsFVLTEAVVMTGDGELRTLTKEAFEFGYRKSVF 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 164 ENKP--VLYGEF-LFKKSQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHA 240
Cdd:PRK12436 181 ANNHyiILEARFeLEEGVYEEIKAKMDDLTFKRESKQPLEYPSCGSVFKRPPNNFAGKLIQESGLQGKRIGGVEVSLKHA 260
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1327556126 241 NFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK12436 261 GFMVNVDNGTAQDYIDLIHFVQKTVEEKFGVKLEREVRII 300
|
|
| PRK14653 |
PRK14653 |
UDP-N-acetylmuramate dehydrogenase; |
6-279 |
4.18e-42 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237778 [Multi-domain] Cd Length: 297 Bit Score: 146.13 E-value: 4.18e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 6 NVDLRDFTTIKIGGVGSYMFFPENEKEFLDIYK-KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIKISETKegil 82
Cdd:PRK14653 19 NEEMKCHVSFKIGGPVPLFAIPNSTNGFIETINlLKEGIEVKILGNGTNVLPKDepMDFVVVSTERLDDIFVDNDK---- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 83 VKASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDNDEIVYKPKEEIFYTYRKTE 162
Cdd:PRK14653 95 IICESGLSLKKLCLVAAKNGLSGFENAYGIPGSVGGAVYMNAGAYGWETAENIVEVVAYDGKKIIRLGKNEIKFSYRNSI 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 163 F-ENKPVLYGEFLFKKSQQD---IKPLAQTINQKRMEAQPLNMPTSGSTFKNP-KGHFAGKLLETVGLKGYRIKDIGFSQ 237
Cdd:PRK14653 175 FkEEKDLIILRVTFKLKKGNkneIYNLMLETMKKRVEKQPLEFPSAGSVFKRPrKDFYVGSAIEKLGLKGFSIGGAQISE 254
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1327556126 238 KHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKL 279
Cdd:PRK14653 255 KHAGFIINYNNAKAEDVLKLIEYVKDKIYENYNVELETEIEI 296
|
|
| MurB_C |
pfam02873 |
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; Members of this family are ... |
187-280 |
6.22e-40 |
|
UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; Members of this family are UDP-N-acetylenolpyruvoylglucosamine reductase enzymes EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.
Pssm-ID: 460730 [Multi-domain] Cd Length: 99 Bit Score: 134.40 E-value: 6.22e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 187 QTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHANFLINYQNASFQNVIDILSIAKERVY 266
Cdd:pfam02873 6 LELRRRRLAKQPLDPPSAGSFFKNPVGHSAGWLIEQAGLKGYRIGGAQVSEKHANFLVNTGGATAADVLALIEEVRERVK 85
|
90
....*....|....
gi 1327556126 267 KAFNIILEEEIKLV 280
Cdd:pfam02873 86 EKFGVELEPEVRII 99
|
|
| PRK14652 |
PRK14652 |
UDP-N-acetylmuramate dehydrogenase; |
13-280 |
1.59e-36 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237777 [Multi-domain] Cd Length: 302 Bit Score: 131.92 E-value: 1.59e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 13 TTIKIGGVGSYMFFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHfyDIKISETKEGILVkASAG 88
Cdd:PRK14652 28 TAVRVGGPADLLVRPADPDALSALLRavRELGVPLSILGGGANTLVADagVRGVVLRLPQ--DFPGESTDGGRLV-LGAG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 89 VPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDNDEIVYKPKEEIFYTYRKTEFENKPV 168
Cdd:PRK14652 105 APISRLPARAHAHGLVGMEFLAGIPGTLGGAVAMNAGTKLGEMKDVVTAVELATADGAGFVPAAALGYAYRTCRLPPGAV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 169 LYG-EFLFKKSqqDI---KPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHANFLI 244
Cdd:PRK14652 185 ITRvEVRLRPG--DVaasEALMRADRERRRRTQPLDRPTFGSTFTNPPGDYAGRLVEAVGLKGHRVGGAIWSPVHANFVT 262
|
250 260 270
....*....|....*....|....*....|....*.
gi 1327556126 245 NYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK14652 263 NLGGATARDVLALVRLARARVKERFGIALETEVRLL 298
|
|
| murB |
PRK13906 |
UDP-N-acetylmuramate dehydrogenase; |
9-280 |
1.02e-33 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 184386 [Multi-domain] Cd Length: 307 Bit Score: 124.55 E-value: 1.02e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 9 LRDFTTIKIGGVGSYMFFPENEKEFLDI--YKKHKNDKLCILGKGSNTIF--GDFNGVLINTKHFYDIKISETKegilVK 84
Cdd:PRK13906 25 LKRYTYTKTGGNADFYITPTKNEEVQAVvkYAYQNEIPVTYLGNGSNIIIreGGIRGIVISLLSLDHIEVSDDA----II 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 85 ASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYRKTEF 163
Cdd:PRK13906 101 AGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQgSLIKLTTKELELDYRNSII 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 164 ENKPVLYGEFLFKKS---QQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDIGFSQKHA 240
Cdd:PRK13906 181 QKEHLVVLEAAFTLApgkMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHA 260
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1327556126 241 NFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK13906 261 GFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRII 300
|
|
| PRK14649 |
PRK14649 |
UDP-N-acetylmuramate dehydrogenase; |
12-280 |
1.04e-33 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 173112 [Multi-domain] Cd Length: 295 Bit Score: 124.18 E-value: 1.04e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 12 FTTIKIGGVGSYMFFPENEKEFLDI--YKKHKNDKLCILGKGSNTIFGD--FNGVLINTKHfYDIKISETKEGILVKASA 87
Cdd:PRK14649 12 YTSWRIGGPARYFVEPTTPDEAIAAaaWAEQRQLPLFWLGGGSNLLVRDegFDGLVARYRG-QRWELHEHGDTAEVWVEA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 88 GVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDND-EIVYKPKEEIFYTYRKTEFE-- 164
Cdd:PRK14649 91 GAPMAGTARRLAAQGWAGLEWAEGLPGTIGGAIYGNAGCYGGDTATVLIRAWLLLNGsECVEWSVHDFAYGYRTSVLKql 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 165 -------NKP-VLYGEFLFKKSqqDIKPLAQ---TINQKRMEAQPLNmPTSGSTFKNPKGHFAGKLLETVGLKGYRIKDI 233
Cdd:PRK14649 171 radgitwRPPlVLAARFRLHRD--DPTALAArmeAIAAERKQKTPAG-SSCGSVFKNPPGDSAGRLIEAAGLKGTRIGDA 247
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1327556126 234 GFSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEIKLV 280
Cdd:PRK14649 248 EIATRHANYIINLGGARAADILRLIDLARTRVLAQFGIELELEVRII 294
|
|
| PRK14650 |
PRK14650 |
UDP-N-acetylmuramate dehydrogenase; |
2-277 |
1.53e-28 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 173113 [Multi-domain] Cd Length: 302 Bit Score: 110.70 E-value: 1.53e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 2 ITNKNVDLRDFTTIKIGGVGSYMFFPENEKEFLDIYKKHKNDK--LCILGKGSNTIFGD---FNGVLINTKHFYDIKISE 76
Cdd:PRK14650 14 IKPQTKNLANYTTYKIGGISKLFLTPKTIKDAEHIFKAAIEEKikIFILGGGSNILINDeeeIDFPIIYTGHLNKIEIHD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 77 TKegilVKASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYID-NDEIVYKPKEEIF 155
Cdd:PRK14650 94 NQ----IVAECGTNFEDLCKFALQNELSGLEFIYGLPGTLGGAIWMNARCFGNEISEILDKITFIDeKGKTICKKFKKEE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 156 YTYRKTEFENKP--VLYGEFLFKK-SQQDIKPLAQTINQKRMEAQPLNMPTSGSTFKNPKGHF--AGKLLETVGLKGYRI 230
Cdd:PRK14650 170 FKYKISPFQNKNtfILKATLNLKKgNKKHIEEIMKQNKQIRINKGHYLFPSSGSTFKNNKAFLkpTGQIIEECKLKGLSI 249
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1327556126 231 KDIGFSQKHANFLINYQNASFQNVIDILSIAKERVYKAFNIILEEEI 277
Cdd:PRK14650 250 GGATVSHYHGNFIININNATSKDIKTLIEKVKTEVQIKTGFLLEEEV 296
|
|
| murB |
PRK00046 |
UDP-N-acetylmuramate dehydrogenase; |
1-280 |
3.10e-28 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 234593 [Multi-domain] Cd Length: 334 Bit Score: 110.62 E-value: 3.10e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 1 MITNKNVDLRDFTTIKIGGVGSYMFFPENEKEFLDIYKKHKNDKLC--ILGKGSNTIF-GDFNG-VLINtkhfyDIK--- 73
Cdd:PRK00046 1 MQLQMNHSLKPLNTFGIDARARHLVEAESEEQLLEALADARAAGLPvlVLGGGSNVLFtEDFDGtVLLN-----RIKgie 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 74 -ISETKEGILVKASAGVPLKDLIKLSVENNveeFY-----KLIgfPASIGGAIAMNAGAYGVEIFDFIKGVWYID--NDE 145
Cdd:PRK00046 76 vLSEDDDAWYLHVGAGENWHDLVLWTLQQG---MPglenlALI--PGTVGAAPIQNIGAYGVELKDVCDYVEALDlaTGE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 146 IVYKPKEEIFYTYR----KTEFENK---------------PVL-YGEFlfkKSQQDIKPLAQTINQK----RMEA--QPL 199
Cdd:PRK00046 151 FVRLSAAECRFGYRdsifKHEYPDRyaitavgfrlpkqwqPVLdYGDL---ARLDPDTVTAQDVFDAvcaiRRSKlpDPK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 200 NMPTSGSTFKNP---KGHF-----------------------AGKLLETVGLKGYRIKDIGFSQKHANFLINYQNASFQn 253
Cdd:PRK00046 228 VLGNAGSFFKNPvvsAEQFeallaqypdiphypqadgsvklaAGWLIDQCGLKGFQIGGAAVHEKQALVLVNYGNATGA- 306
|
330 340 350
....*....|....*....|....*....|
gi 1327556126 254 viDILSIAK---ERVYKAFNIILEEEIKLV 280
Cdd:PRK00046 307 --DVLALARhiqQDVREKFGVELEPEPRFI 334
|
|
| PRK14651 |
PRK14651 |
UDP-N-acetylmuramate dehydrogenase; |
5-265 |
6.30e-27 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237776 [Multi-domain] Cd Length: 273 Bit Score: 105.67 E-value: 6.30e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 5 KNVDLRDFTTIKIGGvGSYMFFPENEKEFldiyKKHKNDKLCILGKGSNTIFGDfNGVLINTkhfydIKISetkeGILVK 84
Cdd:PRK14651 5 ERVPLARYTTLGVGG-PAELWTVETHEQL----AEATEAPYRVLGGGSNLLVSD-AGVPERV-----IRLG----GEFAE 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 85 AS------AGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDNDEI-VYKPkEEIFYT 157
Cdd:PRK14651 70 WDldgwvgGGVPLPGLVRRAARLGLSGLEGLVGIPAQVGGAVKMNAGTRFGEMADALHTVEIVHDGGFhQYSP-DELGFG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 158 YRKTEFENKPVLygeflfKKSQQDIKPLAQTINQKRMEA-------QPlNMPTSGSTFKNPKGHFAGKLLETVGLKGYRI 230
Cdd:PRK14651 149 YRHSGLPPGHVV------TRVRLKLRPSTPEAVLAKMALvdaarkgQP-KKKSAGCAFKNPPGDSAGRLIDEAGLKGTRV 221
|
250 260 270
....*....|....*....|....*....|....*
gi 1327556126 231 KDIGFSQKHANFLINYQNASFQNVIDILSIAKERV 265
Cdd:PRK14651 222 GDAMISPEHGNFIVNLGGATAADVHALLRRVRARV 256
|
|
| PRK14648 |
PRK14648 |
UDP-N-acetylmuramate dehydrogenase; |
2-277 |
1.48e-17 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 173111 [Multi-domain] Cd Length: 354 Bit Score: 81.31 E-value: 1.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 2 ITNKNVDLRDFTTIKIGGVGSYMFFPENEKEFLDIYKKHKNDK--LCILGKGSNTIFGD--FNGVLINTKHFYDIKISET 77
Cdd:PRK14648 11 ITRRNVPLAERCSFRIGGAAQFWAEPRSCTQLRALIEEAQRARipLSLIGGGSNVLIADegVPGLMLSLRRFRSLHTQTQ 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 78 KEG-ILVKASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYIDNDEIVYKPKEeiFY 156
Cdd:PRK14648 91 RDGsVLVHAGAGLPVAALLAFCAHHALRGLETFAGLPGSVGGAAYMNARCYGRAIADCFHSARTLVLHPVRSRAKE--LP 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 157 TYRK-------------------TEFENKPVLYGEFLFKKS----------------------------QQDIKPLAQTI 189
Cdd:PRK14648 169 EVRKnaqdkrgeclgldggpftcSSFQTVFARAGDWGYKRSpfqsphgvelhagrrlilslcvrltpgnPAQIRKHMQEK 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 190 NQKRMEAQPLNMPTSGSTFKNPK--GHFAGKLLETVGLKGYRIKDIGFSQKHANFLINYQNASFQNVIDILSIAKERVYK 267
Cdd:PRK14648 249 IADRISKGQFRFPSAGSAFKNNPafGKPSGILIEEAGLRGTSCGAAQVAPWHGNLIINTGNATAHQVRTLLRVVRQRVFE 328
|
330
....*....|
gi 1327556126 268 AFNIILEEEI 277
Cdd:PRK14648 329 THGVWLEREI 338
|
|
| FAD_binding_4 |
pfam01565 |
FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most ... |
25-147 |
1.17e-14 |
|
FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.
Pssm-ID: 426326 [Multi-domain] Cd Length: 139 Bit Score: 69.15 E-value: 1.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 25 FFPENEKEFLDIYK--KHKNDKLCILGKGSNTIFGD--FNGVLINTKHFYDIkISETKEGILVKASAGVPLKDLIK-LSV 99
Cdd:pfam01565 5 VLPESEEEVAAIVRlaNENGLPVLPRGGGSSLLGGAvqTGGIVLDLSRLNGI-LEIDPEDGTATVEAGVTLGDLVRaLAA 83
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1327556126 100 ENNVEEFYKLIGFPASIGGAIAMNAGAYGVE----IFDFIKGVWYIDND-EIV 147
Cdd:pfam01565 84 KGLLLGLDPGSGIPGTVGGAIATNAGGYGSEkyglTRDNVLGLEVVLADgEVV 136
|
|
| murB |
PRK13903 |
UDP-N-acetylmuramate dehydrogenase; |
6-280 |
3.52e-11 |
|
UDP-N-acetylmuramate dehydrogenase;
Pssm-ID: 237552 [Multi-domain] Cd Length: 363 Bit Score: 62.67 E-value: 3.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 6 NVDLRDFTTIKIGGVGSYMFFPENEKEFLDIYKK--HKNDKLCILGKGSNTIFGD--FNG--VLINTKhfydiKISETKE 79
Cdd:PRK13903 18 DVPLAPLTTLRVGGPARRLVTCTSTEELVAAVREldAAGEPLLVLGGGSNLVIADdgFDGtvVRVATR-----GVTVDCG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 80 GILVKASAGVPLKDLIKLSVENNVEEFYKLIGFPASIGGAIAMNAGAYGVEIFDFIKGVWYID--NDEIVYKPKEEIFYT 157
Cdd:PRK13903 93 GGLVRAEAGAVWDDVVARTVEAGLGGLECLSGIPGSAGATPVQNVGAYGQEVSDTITRVRLLDrrTGEVRWVPAADLGFG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 158 YRKT-------------EFE------NKPVLYGEfLFKK---SQQDIKPLAQ---TINQKR----MEAQPLNMPT--SGS 206
Cdd:PRK13903 173 YRTSvlkhsdravvlevEFQldpsglSAPLRYGE-LARAlgvEPGERVPPAAvreAVLALRagkgMVLDPADHDTwsAGS 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1327556126 207 TFKNP----------------------------KGHF---AGKLLETVGL-KGYRIKD--IGFSQKHANFLINYQNASFQ 252
Cdd:PRK13903 252 FFTNPvvspavaerlaarvaerlgdpvprypagDGGVklsAAWLIERAGFgKGYPGGGapARLSTKHTLALTNRGGATTA 331
|
330 340 350
....*....|....*....|....*....|.
gi 1327556126 253 nviDILSIAKE---RVYKAFNIILEEEIKLV 280
Cdd:PRK13903 332 ---DLVALAREvrdGVRDAFGVTLVPEPVLV 359
|
|
|