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Conserved domains on  [gi|1309086001|gb|PKP65623|]
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glutathione-dependent disulfide-bond oxidoreductase [Alphaproteobacteria bacterium HGW-Alphaproteobacteria-7]

Protein Classification

thiol:disulfide oxidoreductase( domain architecture ID 11485490)

thiol:disulfide oxidoreductase is a glutathione S-transferase family protein similar to the disulfide-bond oxidoreducatase YghU

Gene Ontology:  GO:0016740

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-265 0e+00

putative S-transferase; Provisional


:

Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 518.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001   1 MADATYTPPAVWNADTVSGGRFASINRPTAGARDEKELPVGEHPFQLYSLATPNGVKVTVMLEELIEAGHAGAEYDAWTV 80
Cdd:PRK11752    1 MTDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  81 NIGSGDQFTSGFVAANPNSKIPALIDRSGPQPFRVFESGAILVHLAEKFGAFLPTDPQARAEVLSWVFWQVGTGPFIGGG 160
Cdd:PRK11752   81 RIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 161 FGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIYnDAKTFLSIDEYKNV 240
Cdd:PRK11752  161 FGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLY-DAAEFLDVGSYKHV 239
                         250       260
                  ....*....|....*....|....*
gi 1309086001 241 GRWVKDIYARPAVKRGRIVNKVWGD 265
Cdd:PRK11752  240 QRWAKEIAERPAVKRGRIVNRTWGE 264
 
Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-265 0e+00

putative S-transferase; Provisional


Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 518.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001   1 MADATYTPPAVWNADTVSGGRFASINRPTAGARDEKELPVGEHPFQLYSLATPNGVKVTVMLEELIEAGHAGAEYDAWTV 80
Cdd:PRK11752    1 MTDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  81 NIGSGDQFTSGFVAANPNSKIPALIDRSGPQPFRVFESGAILVHLAEKFGAFLPTDPQARAEVLSWVFWQVGTGPFIGGG 160
Cdd:PRK11752   81 RIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 161 FGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIYnDAKTFLSIDEYKNV 240
Cdd:PRK11752  161 FGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLY-DAAEFLDVGSYKHV 239
                         250       260
                  ....*....|....*....|....*
gi 1309086001 241 GRWVKDIYARPAVKRGRIVNKVWGD 265
Cdd:PRK11752  240 QRWAKEIAERPAVKRGRIVNRTWGE 264
GST_C_YghU_like cd10292
C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and ...
139-257 8.80e-59

C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YghU-like subfamily; composed of the Escherichia coli YghU and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YghU is one of nine GST homologs in the genome of Escherichia coli. It is similar to Escherichia coli YfcG in that it has poor GSH transferase activity towards typical substrates. It shows modest reductase activity towards some organic hydroperoxides. Like YfcG, YghU also shows good disulfide bond oxidoreductase activity comparable to the activities of glutaredoxins and thioredoxins. YghU does not contain a redox active cysteine residue, and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YghU reveals two GSH molecules bound in its active site.


Pssm-ID: 198325 [Multi-domain]  Cd Length: 118  Bit Score: 183.43  E-value: 8.80e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 139 ARAEVLSWVFWQVGTGPFIGGGFGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAP 218
Cdd:cd10292     1 KRTETLNWLFWQMGSAPYLGGGFGHFYSYAPVKIEYAIDRFTMEAKRQLDVLDRQLATHKYLAGDEYTIADMAIWPWYGG 80
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1309086001 219 FTTGEIYnDAKTFLSIDEYKNVGRWVKDIYARPAVKRGR 257
Cdd:cd10292    81 LALGSLY-DAAEFLDVDEYKHVQRWAKDIAARPAVKRGR 118
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
46-257 9.00e-57

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 181.25  E-value: 9.00e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  46 QLYSLAT-PNGVKVTVMLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRsgpqPFRVFESGAILVH 124
Cdd:COG0625     3 KLYGSPPsPNSRRVRIALEEK------GLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLVDD----GLVLTESLAILEY 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 125 LAEKFG--AFLPTDPQARAEVLSWVFWQVGT-GPFIGGgfgHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLA 201
Cdd:COG0625    73 LAERYPepPLLPADPAARARVRQWLAWADGDlHPALRN---LLERLAPEKDPAAIARARAELARLLAVLEARLAGGPYLA 149
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1309086001 202 GDDYTIADIANFPWLAPFTTGEIyndaktflSIDEYKNVGRWVKDIYARPAVKRGR 257
Cdd:COG0625   150 GDRFSIADIALAPVLRRLDRLGL--------DLADYPNLAAWLARLAARPAFQRAL 197
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
182-251 4.09e-07

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 47.28  E-value: 4.09e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 182 ETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLapfttgEIYNDAKTFLSIDEYKNVGRWVKDIYARP 251
Cdd:pfam00043  30 KVARVLSALEEVLKGQTYLVGDKLTLADIALAPAL------LWLYELDPACLREKFPNLKAWFERVAARP 93
 
Name Accession Description Interval E-value
PRK11752 PRK11752
putative S-transferase; Provisional
1-265 0e+00

putative S-transferase; Provisional


Pssm-ID: 183298 [Multi-domain]  Cd Length: 264  Bit Score: 518.71  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001   1 MADATYTPPAVWNADTVSGGRFASINRPTAGARDEKELPVGEHPFQLYSLATPNGVKVTVMLEELIEAGHAGAEYDAWTV 80
Cdd:PRK11752    1 MTDNTYQPPKVWTWDKSNGGAFANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  81 NIGSGDQFTSGFVAANPNSKIPALIDRSGPQPFRVFESGAILVHLAEKFGAFLPTDPQARAEVLSWVFWQVGTGPFIGGG 160
Cdd:PRK11752   81 RIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGAFLPKDLAARTETLNWLFWQQGSAPFLGGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 161 FGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIYnDAKTFLSIDEYKNV 240
Cdd:PRK11752  161 FGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLY-DAAEFLDVGSYKHV 239
                         250       260
                  ....*....|....*....|....*
gi 1309086001 241 GRWVKDIYARPAVKRGRIVNKVWGD 265
Cdd:PRK11752  240 QRWAKEIAERPAVKRGRIVNRTWGE 264
GST_C_YghU_like cd10292
C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and ...
139-257 8.80e-59

C-terminal, alpha helical domain of Escherichia coli Yghu Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YghU-like subfamily; composed of the Escherichia coli YghU and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YghU is one of nine GST homologs in the genome of Escherichia coli. It is similar to Escherichia coli YfcG in that it has poor GSH transferase activity towards typical substrates. It shows modest reductase activity towards some organic hydroperoxides. Like YfcG, YghU also shows good disulfide bond oxidoreductase activity comparable to the activities of glutaredoxins and thioredoxins. YghU does not contain a redox active cysteine residue, and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YghU reveals two GSH molecules bound in its active site.


Pssm-ID: 198325 [Multi-domain]  Cd Length: 118  Bit Score: 183.43  E-value: 8.80e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 139 ARAEVLSWVFWQVGTGPFIGGGFGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAP 218
Cdd:cd10292     1 KRTETLNWLFWQMGSAPYLGGGFGHFYSYAPVKIEYAIDRFTMEAKRQLDVLDRQLATHKYLAGDEYTIADMAIWPWYGG 80
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1309086001 219 FTTGEIYnDAKTFLSIDEYKNVGRWVKDIYARPAVKRGR 257
Cdd:cd10292    81 LALGSLY-DAAEFLDVDEYKHVQRWAKDIAARPAVKRGR 118
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
46-257 9.00e-57

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 181.25  E-value: 9.00e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  46 QLYSLAT-PNGVKVTVMLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRsgpqPFRVFESGAILVH 124
Cdd:COG0625     3 KLYGSPPsPNSRRVRIALEEK------GLPYELVPVDLAKGEQKSPEFLALNPLGKVPVLVDD----GLVLTESLAILEY 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 125 LAEKFG--AFLPTDPQARAEVLSWVFWQVGT-GPFIGGgfgHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLA 201
Cdd:COG0625    73 LAERYPepPLLPADPAARARVRQWLAWADGDlHPALRN---LLERLAPEKDPAAIARARAELARLLAVLEARLAGGPYLA 149
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1309086001 202 GDDYTIADIANFPWLAPFTTGEIyndaktflSIDEYKNVGRWVKDIYARPAVKRGR 257
Cdd:COG0625   150 GDRFSIADIALAPVLRRLDRLGL--------DLADYPNLAAWLARLAARPAFQRAL 197
PRK13972 PRK13972
GSH-dependent disulfide bond oxidoreductase; Provisional
47-252 1.95e-47

GSH-dependent disulfide bond oxidoreductase; Provisional


Pssm-ID: 172475 [Multi-domain]  Cd Length: 215  Bit Score: 157.93  E-value: 1.95e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  47 LYSLATPNGVKVTVMLEElieaghAGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRS---GPQPFRVFESGAILV 123
Cdd:PRK13972    4 LYFAPTPNGHKITLFLEE------AELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSpadGGEPLSLFESGAILL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 124 HLAEKFGAFLPTDPQARAEVLSWVFWQVG-TGPFIGGGFgHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAG 202
Cdd:PRK13972   78 YLAEKTGLFLSHETRERAATLQWLFWQVGgLGPMLGQNH-HFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGG 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1309086001 203 DDYTIADIANFPWLAPFTTGEIyndaktflSIDEYKNVGRWVKDIYARPA 252
Cdd:PRK13972  157 ENYSIADIACWPWVNAWTRQRI--------DLAMYPAVKNWHERIRSRPA 198
GST_C_YfcG_like cd10291
C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and ...
140-256 2.30e-41

C-terminal, alpha helical domain of Escherichia coli YfcG Glutathione S-transferases and related uncharacterized proteins; Glutathione S-transferase (GST) C-terminal domain family, YfcG-like subfamily; composed of the Escherichia coli YfcG and related proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. YfcG is one of nine GST homologs in Escherichia coli. It is expressed predominantly during the late stationary phase where the predominant form of GSH is glutathionylspermidine (GspSH), suggesting that YfcG might interact with GspSH. It has very low or no GSH transferase or peroxidase activity, but displays a unique disulfide bond reductase activity that is comparable to thioredoxins (TRXs) and glutaredoxins (GRXs). However, unlike TRXs and GRXs, YfcG does not contain a redox active cysteine residue and may use a bound thiol disulfide couple such as 2GSH/GSSG for activity. The crystal structure of YcfG reveals a bound GSSG molecule in its active site. The actual physiological substrates for YfcG are yet to be identified.


Pssm-ID: 198324 [Multi-domain]  Cd Length: 110  Bit Score: 138.55  E-value: 2.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 140 RAEVLSWVFWQV-GTGPFIGGgFGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAP 218
Cdd:cd10291     2 RYAVLQWLMWQMgGLGPMQGQ-AHHFKRYAPEKIPYAIKRYTNETKRLYGVLDRRLAKSKYLAGDEYSIADIAIWPWVAR 80
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1309086001 219 FTTGEIyndaktflSIDEYKNVGRWVKDIYARPAVKRG 256
Cdd:cd10291    81 HEWQGI--------DLADFPNLKRWFERLAARPAVQKG 110
GST_C_Ure2p_like cd03178
C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; ...
139-255 1.41e-39

C-terminal, alpha helical domain of Ure2p and related Glutathione S-transferase-like proteins; Glutathione S-transferase (GST) C-terminal domain family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p, YfcG and YghU from Escherichia coli, and related GST-like proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. YfcG and YghU are two of the nine GST homologs in the genome of Escherichia coli. They display very low or no GSH transferase, but show very good disulfide bond oxidoreductase activity. YghU also shows modest organic hydroperoxide reductase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198288 [Multi-domain]  Cd Length: 110  Bit Score: 133.91  E-value: 1.41e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 139 ARAEVLSWVFWQVGTGPFIGGGFGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAP 218
Cdd:cd03178     1 ERAEVLQWLFFQMSGLGPMFGQAGHFLYFAPEKIPYAIERYTDEVKRLYGVLDKRLSDRPYLAGEEYSIADIALYPWTHY 80
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1309086001 219 FTTGEIYndaktflSIDEYKNVGRWVKDIYARPAVKR 255
Cdd:cd03178    81 ADLGGFA-------DLSEYPNVKRWLERIAARPAVQK 110
GST_N_Ure2p_like cd03048
GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related ...
44-130 7.65e-38

GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and Schizosaccharomyces pombe GST-I. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes.


Pssm-ID: 239346 [Multi-domain]  Cd Length: 81  Bit Score: 128.43  E-value: 7.65e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  44 PFQLYSLATPNGVKVTVMLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRSGPqPFRVFESGAILV 123
Cdd:cd03048     1 MITLYTHGTPNGFKVSIMLEEL------GLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGT-PLTVFESGAILL 73

                  ....*..
gi 1309086001 124 HLAEKFG 130
Cdd:cd03048    74 YLAEKYD 80
GST_C_Ure2p cd10293
C-terminal, alpha helical domain of fungal Ure2p Glutathione S-transferases; Glutathione ...
141-256 1.49e-15

C-terminal, alpha helical domain of fungal Ure2p Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Ure2p subfamily; composed of the Saccharomyces cerevisiae Ure2p and related fungal proteins. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST active site is located in a cleft between the N- and C-terminal domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198326 [Multi-domain]  Cd Length: 117  Bit Score: 71.31  E-value: 1.49e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 141 AEVLSWVFWQV-GTGPFIGGgFGHFYAYAPEKYEYPINRYAMETKRIFDVADKRLGET--RFLAGDDYTIADIANFPWLA 217
Cdd:cd10293     3 YQAKQWLFFQAsGQGPYWGQ-AGWFNVFHAEKVPSAIERYTNEIRRVLGVLETALAERyrVWLVGDKFTIADLAFVPWNN 81
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1309086001 218 pfTTGEIYNDAKTFLsIDEYKNVGRWVKDIYARPAVKRG 256
Cdd:cd10293    82 --VVDMIFIDPELDI-KKEFPHVYKWLKRMLARPAVKKA 117
GST_C_Phi cd03187
C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione ...
184-255 1.95e-13

C-terminal, alpha helical domain of Class Phi Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 198296 [Multi-domain]  Cd Length: 118  Bit Score: 65.33  E-value: 1.95e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1309086001 184 KRIFDVADKRLGETRFLAGDDYTIADIANFPWlapftTGEIYNDAKTFLsIDEYKNVGRWVKDIYARPAVKR 255
Cdd:cd03187    51 KKVLDVYEARLSKSKYLAGDSFTLADLSHLPN-----LHYLMATPSKKL-FDSRPHVKAWWEDISARPAWKK 116
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
61-130 1.36e-12

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 61.75  E-value: 1.36e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  61 MLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgpQPFRVFESGAILVHLAEKFG 130
Cdd:cd03046    17 LLEEL------GLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVD----GDLVLTESAAIILYLAEKYG 76
PLN02395 PLN02395
glutathione S-transferase
51-255 3.83e-10

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 58.34  E-value: 3.83e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  51 ATPNGVKVTvmleeLIEAGhagAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRSgpqpFRVFESGAILVHLAEKFG 130
Cdd:PLN02395   11 ASPKRALVT-----LIEKG---VEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGD----YKIFESRAIMRYYAEKYR 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 131 A----FLPTDPQARAEVLSWVFWQVGT-GPFIGG-----GFGHFYAYAPEkyEYPINRYAMETKRIFDVADKRLGETRFL 200
Cdd:PLN02395   79 SqgpdLLGKTIEERGQVEQWLDVEATSyHPPLLNltlhiLFASKMGFPAD--EKVIKESEEKLAKVLDVYEARLSKSKYL 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1309086001 201 AGDDYTIADIANFpwlaPFTTGEIYNDAKTFLsIDEYKNVGRWVKDIYARPAVKR 255
Cdd:PLN02395  157 AGDFVSLADLAHL----PFTEYLVGPIGKAYL-IKDRKHVSAWWDDISSRPAWKE 206
GST_N_family cd00570
Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic ...
46-126 1.42e-09

Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxin 2 and stringent starvation protein A.


Pssm-ID: 238319 [Multi-domain]  Cd Length: 71  Bit Score: 53.34  E-value: 1.42e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  46 QLYSLAT-PNGVKVTVMLEELieaghaGAEYDAWTVNIGSGDQFTsgFVAANPNSKIPALIDRsgpqPFRVFESGAILVH 124
Cdd:cd00570     2 KLYYFPGsPRSLRVRLALEEK------GLPYELVPVDLGEGEQEE--FLALNPLGKVPVLEDG----GLVLTESLAILEY 69

                  ..
gi 1309086001 125 LA 126
Cdd:cd00570    70 LA 71
PLN02473 PLN02473
glutathione S-transferase
72-255 6.47e-09

glutathione S-transferase


Pssm-ID: 166114 [Multi-domain]  Cd Length: 214  Bit Score: 54.99  E-value: 6.47e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  72 GAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRSgpqpFRVFESGAILVHLAEKFG----AFLPTDPQARAEVLSWV 147
Cdd:PLN02473   25 GIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGD----LKLFESRAIARYYATKYAdqgtDLLGKTLEHRAIVDQWV 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 148 fwQVGTGpfigggfgHFYAYA----------PEKYE----YPINRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANF 213
Cdd:PLN02473  101 --EVENN--------YFYAVAlplvinlvfkPRLGEpcdvALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHM 170
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1309086001 214 PWLapfttGEIYNDAKTFLSIDEYKNVGRWVKDIYARPAVKR 255
Cdd:PLN02473  171 PGM-----RYIMNETSLSGLVTSRENLNRWWNEISARPAWKK 207
GST_C_2 cd03180
C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; ...
138-252 8.37e-08

C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198289 [Multi-domain]  Cd Length: 110  Bit Score: 49.59  E-value: 8.37e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 138 QARAEVLSWVFWQVGT-GPFIGGGFGHFYAYAPEKYEYP-INRYAMETKRIFDVADKRLGETRFLAGDDYTIADIA---- 211
Cdd:cd03180     1 AQRALADRWMDWQTSTlNPAFRYAFWGLVRTPPEQRDPAaIAASLAACNKLMAILDAQLARQAYLAGDRFTLADIAlgcs 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1309086001 212 NFPWLApfttgeiyndaktfLSID--EYKNVGRWVKDIYARPA 252
Cdd:cd03180    81 VYRWLE--------------LPIErpALPHLERWYARLSQRPA 109
GST_C_Omega_like cd03190
C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione ...
188-255 1.45e-07

C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae Omega-like subfamily; composed of three Saccharomyces cerevisiae GST omega-like (Gto) proteins, Gto1p, Gto2p (also known as Extracellular mutant protein 4 or ECM4p), and Gto3p, as well as similar uncharacterized proteins from fungi and bacteria. The three Saccharomyces cerevisiae Gto proteins are omega-class GSTs with low or no GST activity against standard substrates, but have glutaredoxin/thiol oxidoreductase and dehydroascorbate reductase activity through a single cysteine residue in the active site. Gto1p is located in the peroxisomes while Gto2p and Gto3p are cytosolic. The gene encoding Gto2p, called ECM4, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.


Pssm-ID: 198299 [Multi-domain]  Cd Length: 142  Bit Score: 49.49  E-value: 1.45e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1309086001 188 DVADKRLGETRFLAGDDYTIADIANFPWLAPFTTgeIYNDA-----KTflsIDEYKNVGRWVKDIYARPAVKR 255
Cdd:cd03190    47 DKLEKRLSKQPYLLGDRLTEADIRLFTTLIRFDP--VYHQHfkcnlKT---IRDYPNLWRYLRRLYQNPGVFE 114
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
74-129 3.28e-07

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 46.85  E-value: 3.28e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1309086001  74 EYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRSgpqpFRVFESGAILVHLAEKF 129
Cdd:cd03050    25 PFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGD----FTLAESVAILRYLARKF 76
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
182-251 4.09e-07

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 47.28  E-value: 4.09e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 182 ETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLapfttgEIYNDAKTFLSIDEYKNVGRWVKDIYARP 251
Cdd:pfam00043  30 KVARVLSALEEVLKGQTYLVGDKLTLADIALAPAL------LWLYELDPACLREKFPNLKAWFERVAARP 93
GST_N_Beta cd03057
GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
60-129 1.37e-06

GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.


Pssm-ID: 239355 [Multi-domain]  Cd Length: 77  Bit Score: 45.22  E-value: 1.37e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  60 VMLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgPQPFRVFESGAILVHLAEKF 129
Cdd:cd03057    16 IALEEL------GLPFELVRVDLRTKTQKGADYLAINPKGQVPALVL---DDGEVLTESAAILQYLADLH 76
GST_C_GTT2_like cd03182
C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione ...
187-253 1.90e-06

C-terminal, alpha helical domain of GTT2-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the Saccharomyces cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.


Pssm-ID: 198291 [Multi-domain]  Cd Length: 116  Bit Score: 45.78  E-value: 1.90e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 187 FDVADKRLGETRFLAGDDYTIADIANFPWLapfttgeiynDAKTFLSI---DEYKNVGRWVKDIYARPAV 253
Cdd:cd03182    57 LPVLDKRLAESPYVAGDRFSIADITAFVAL----------DFAKNLKLpvpEELTALRRWYERMAARPSA 116
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
44-128 4.76e-06

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 43.79  E-value: 4.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  44 PFQLYSLA-TPNGVKVTVMLEElieaghAGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgpQPFRVFESGAIL 122
Cdd:cd03053     1 VLKLYGAAmSTCVRRVLLCLEE------KGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALED----GDLKLFESRAIT 70

                  ....*.
gi 1309086001 123 VHLAEK 128
Cdd:cd03053    71 RYLAEK 76
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
70-127 5.16e-06

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 43.45  E-value: 5.16e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1309086001  70 HAGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDRSGPqpfrVFESGAILVHLAE 127
Cdd:pfam02798  23 EKGVEYEIVPLDFGAGPEKSPELLKLNPLGKVPALEDGGKK----LTESRAILEYIAR 76
GST_C_7 cd03206
C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; ...
174-251 7.47e-06

C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198315 [Multi-domain]  Cd Length: 100  Bit Score: 43.75  E-value: 7.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 174 YPIN--RYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIyndaktflSIDEYKNVGRWVKDIYARP 251
Cdd:cd03206    27 APLDpeRARAISHRLLRLLDQHLAGRDWLAGDRPTIADVACYPYIALAPEGGV--------SLEPYPAIRAWLARVEALP 98
GST_N_4 cd03056
GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with ...
54-126 7.50e-06

GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.


Pssm-ID: 239354 [Multi-domain]  Cd Length: 73  Bit Score: 42.95  E-value: 7.50e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1309086001  54 NGVKVTVMLEELieaghaGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgpQPFRVFESGAILVHLA 126
Cdd:cd03056    11 NCYKVRLLLALL------GIPYEWVEVDILKGETRTPEFLALNPNGEVPVLEL----DGRVLAESNAILVYLA 73
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
166-245 7.89e-06

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 43.64  E-value: 7.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 166 AYAPEKYEYPINRYAMETKR-----IFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIYndaktFLSIDEYKNV 240
Cdd:cd00299    19 LLYLEKVPLPKDEAAVEAAReelpaLLAALEQLLAGRPYLAGDQFSLADVALAPVLARLEALGPY-----YDLLDEYPRL 93

                  ....*
gi 1309086001 241 GRWVK 245
Cdd:cd00299    94 KAWYD 98
GST_C_EF1Bgamma_like cd03181
Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of ...
143-265 2.66e-05

Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins; Glutathione S-transferase (GST) C-terminal domain family, Gamma subunit of Elongation Factor 1B (EF1Bgamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds to membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression. Also included in this subfamily is the GST_C-like domain at the N-terminus of human valyl-tRNA synthetase (ValRS) and its homologs. Metazoan ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF.


Pssm-ID: 198290 [Multi-domain]  Cd Length: 123  Bit Score: 42.93  E-value: 2.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 143 VLSWVFWQVGTGPFIgggfghfyAYAPEKyeypinryAME-TKRIFDVADKRLgETR-FLAGDDYTIADIANFPWLAPFT 220
Cdd:cd03181    20 AATWVLPLLGIAPYN--------KKAVDK--------AKEdLKRALGVLEEHL-LTRtYLVGERITLADIFVASALLRGF 82
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1309086001 221 TgeiYNDAKTFLSidEYKNVGRWVKDIYARPAVKrgrivnKVWGD 265
Cdd:cd03181    83 E---TVLDPEFRK--KYPNVTRWFNTVVNQPKFK------AVFGE 116
PRK15113 PRK15113
glutathione transferase;
44-209 3.66e-05

glutathione transferase;


Pssm-ID: 185068 [Multi-domain]  Cd Length: 214  Bit Score: 43.79  E-value: 3.66e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  44 PFQLYS---LATPNGVKVTVMLEElieaghAGAEYDAWTVNIGSGDQFTSGFVAANPNSKIPAL-IDRsgpqpFRVFESG 119
Cdd:PRK15113    5 AITLYSdahFFSPYVMSAFVALQE------KGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLqHDD-----FELSESS 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 120 AILVHLAEKFGA-----FLPTDPQARA---EVLSW----------------VFWQVGTGPFIGGGfghfyayapekyeyp 175
Cdd:PRK15113   74 AIAEYLEERFAPpawerIYPADLQARArarQIQAWlrsdlmplreerptdvVFAGAKKAPLSEAG--------------- 138
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1309086001 176 inRYAMEtkRIFDVADKRLGETR-FLAGdDYTIAD 209
Cdd:PRK15113  139 --KAAAE--KLFAVAERLLAPGQpNLFG-EWCIAD 168
GST_C_GTT1_like cd03189
C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione ...
182-251 5.86e-05

C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 198298 [Multi-domain]  Cd Length: 123  Bit Score: 41.91  E-value: 5.86e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1309086001 182 ETKRIFDVADKRLGETRFLAGDDYTIADIAN-FPWLApfttgeiyndAKTFL-SIDEYKNVGRWVKDIYARP 251
Cdd:cd03189    62 ELKRHLDFLEDHLAKHPYFAGDELTAADIMMsFPLEA----------ALARGpLLEQYPNIAAYLERIEARP 123
GST_N_Delta_Epsilon cd03045
GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved ...
72-127 1.11e-04

GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 239343 [Multi-domain]  Cd Length: 74  Bit Score: 39.90  E-value: 1.11e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1309086001  72 GAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgpQPFRVFESGAILVHLAE 127
Cdd:cd03045    23 GLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVD----NGFVLWESHAILIYLVE 74
GST_C_2 pfam13410
Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.
176-245 2.04e-04

Glutathione S-transferase, C-terminal domain; This domain is closely related to pfam00043.


Pssm-ID: 433185 [Multi-domain]  Cd Length: 67  Bit Score: 38.84  E-value: 2.04e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 176 INRYAMETKRIFDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTgeiynDAKTFLSIDEYKNVGRWVK 245
Cdd:pfam13410   2 LERAREQLRAALDALEARLADGPGLLGDRPTLADIALAPVLARLDA-----AYPGLDLREGYPRLRAWLE 66
PRK10542 PRK10542
glutathionine S-transferase; Provisional
92-254 2.40e-04

glutathionine S-transferase; Provisional


Pssm-ID: 182533 [Multi-domain]  Cd Length: 201  Bit Score: 41.21  E-value: 2.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001  92 FVAANPNSKIPALIDRSGPQpfrVFESGAILVHLAEKF---GAFLPTDPQARAEVLSWVFWqvgTGPFIGGGFGH-FYAY 167
Cdd:PRK10542   43 YLAINPKGQVPALLLDDGTL---LTEGVAIMQYLADSVpdrQLLAPVGSLSRYHTIEWLNY---IATELHKGFTPlFRPD 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 168 APEKYEyPINRYAMETKriFDVADKRLGETRFLAGDDYTIADianfPWLapFTTGEIYNDAKtfLSIDEYKNVGRWVKDI 247
Cdd:PRK10542  117 TPEEYK-PTVRAQLEKK--FQYVDEALADEQWICGQRFTIAD----AYL--FTVLRWAYAVK--LNLEGLEHIAAYMQRV 185

                  ....*..
gi 1309086001 248 YARPAVK 254
Cdd:PRK10542  186 AERPAVA 192
GST_C_Beta cd03188
C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione ...
139-255 4.83e-04

C-terminal, alpha helical domain of Class Beta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they are involved in the protection against oxidative stress and are able to bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs, contributing to antibiotic resistance. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH. One member of this subfamily is a GST from Burkholderia xenovorans LB400 that is encoded by the bphK gene and is part of the biphenyl catabolic pathway.


Pssm-ID: 198297 [Multi-domain]  Cd Length: 113  Bit Score: 38.77  E-value: 4.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 139 ARAEVLSWVFWQVGTgpfIGGGFGHFYAyaPEKYEYPINRYAMETK------RIFDVADKRLGETRFLAGDDYTIADian 212
Cdd:cd03188     2 ERARLLEWLNFIASE---LHKAFGPLFY--PARWADDALAEEVKAAarerleRRLAYLDAQLAGGPYLLGDQFSVAD--- 73
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1309086001 213 fPWLapFTtgeIYNDAKTF-LSIDEYKNVGRWVKDIYARPAVKR 255
Cdd:cd03188    74 -AYL--FV---VLRWARAVgLDLSDWPHLAAYLARVAARPAVQA 111
GST_N_2 cd03047
GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with ...
57-126 9.39e-04

GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.


Pssm-ID: 239345 [Multi-domain]  Cd Length: 73  Bit Score: 37.29  E-value: 9.39e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1309086001  57 KVTVMLEELieaghaGAEYDawtvNIGSGDQF----TSGFVAANPNSKIPALIDRSgpqpFRVFESGAILVHLA 126
Cdd:cd03047    14 KVLWLLDEL------GLPYE----RIDAGGQFggldTPEFLAMNPNGRVPVLEDGD----FVLWESNAILRYLA 73
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
72-125 9.77e-04

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 37.16  E-value: 9.77e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1309086001  72 GAEYDAWTVNIGSGDQFTSGFVAANPNSKIPALIDrsgpQPFRVFESGAILVHL 125
Cdd:cd03042    23 GLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVI----DGLVLTQSLAIIEYL 72
GST_N_2 pfam13409
Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.
53-128 1.34e-03

Glutathione S-transferase, N-terminal domain; This family is closely related to pfam02798.


Pssm-ID: 433184 [Multi-domain]  Cd Length: 68  Bit Score: 36.45  E-value: 1.34e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1309086001  53 PNGVKVTVMLEELieaghaGAEYDAWTVNIgSGDQFTSGFVAANPNSKIPALIDRSGpqpFRVFESGAILVHLAEK 128
Cdd:pfam13409   3 PFSHRVRLALEEK------GLPYEIELVDL-DPKDKPPELLALNPLGTVPVLVLPDG---TVLTDSLVILEYLEEL 68
GST_C_5 cd03196
C-terminal, alpha helical domain of an unknown subfamily 5 of Glutathione S-transferases; ...
136-214 1.35e-03

C-terminal, alpha helical domain of an unknown subfamily 5 of Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.


Pssm-ID: 198305 [Multi-domain]  Cd Length: 115  Bit Score: 37.52  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1309086001 136 DPQARAEVLSWVfwQVGTGPFIgggfghfyaYAPEKYEYPiNRYAMETK--------RIFDVADKRLGETRFLAGDDYTI 207
Cdd:cd03196     3 DPGALPEMLALI--AENDGPFK---------PHLDRYKYA-DRYPEDDEeeyraqaeEFLAELEARLSQHAYLFGDRPSL 70

                  ....*..
gi 1309086001 208 ADIANFP 214
Cdd:cd03196    71 ADYAIFP 77
GST_C_Metaxin cd03193
C-terminal, alpha helical domain of Metaxin and related proteins; Glutathione S-transferase ...
174-219 6.25e-03

C-terminal, alpha helical domain of Metaxin and related proteins; Glutathione S-transferase (GST) C-terminal domain family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. elegans. The fax gene of Drosophila was identified as a genetic modifier of Abelson (Abl) tyrosine kinase. The fax protein is localized in cellular membranes and is expressed in embryonic mesoderm and axons of the central nervous system.


Pssm-ID: 198302 [Multi-domain]  Cd Length: 88  Bit Score: 35.29  E-value: 6.25e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1309086001 174 YPINRYAMETK--RIFDVADKRLGETRFLAGDDYTIADIANFPWLAPF 219
Cdd:cd03193    13 YWALRREIYELalEDLEALSTLLGDKKFLFGDKPTSVDATVFAHLASI 60
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
187-245 9.63e-03

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 35.20  E-value: 9.63e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1309086001 187 FDVADKRLGETRFLAGDDYTIADIANFPWLAPFTTGEIynDAKtflsidEYKNVGRWVK 245
Cdd:cd03177    47 LEFLETFLEGSDYVAGDQLTIADLSLVATVSTLEVVGF--DLS------KYPNVAAWYE 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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